View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8351_high_4 (Length: 293)
Name: NF8351_high_4
Description: NF8351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8351_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 36918509 - 36918783
Alignment:
| Q |
1 |
ccaaacaaaagtatggagtatcaatttttcactcatgttatatagaatagggagtacaagtagagtactcaaaacttgttatacaacataaatgattttt |
100 |
Q |
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| T |
36918509 |
ccaaacaaaagtatggagtatcaatttttcactcatgttatatagaatagggagtacaagtagagtactcaaaacttgttatacaacataaatgattttt |
36918608 |
T |
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| Q |
101 |
taaagtatataaaaattcattattttaattcgtaaatgtctataaatgtgtctcttaagtctcaaaacattttaacaatatgtttgaattaggagcaaac |
200 |
Q |
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| T |
36918609 |
taaagtatataaaaattcattattttaattcgtaaatgtatataaatgtgtctctttagtctc-aaacatattaacaatatgtttgaattaggagcaaac |
36918707 |
T |
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| Q |
201 |
cgcgatgacacgacgcggtaaccttgaagcttcaagttgtagcttcataaaataaaatttgcggtaaatatggatt |
276 |
Q |
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|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
36918708 |
cgcgatgacacgacacggtaaccttgaagcttcaatttgtagcttcataaaataaaatttgcggtaaatatggatt |
36918783 |
T |
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