View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8352_low_2 (Length: 309)

Name: NF8352_low_2
Description: NF8352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8352_low_2
NF8352_low_2
[»] chr4 (57 HSPs)
chr4 (44-289)||(42030254-42030499)
chr4 (1-46)||(24235317-24235362)
chr4 (1-46)||(53662457-53662502)
chr4 (5-45)||(940292-940332)
chr4 (1-49)||(1796360-1796408)
chr4 (1-45)||(5208356-5208400)
chr4 (2-45)||(52487299-52487342)
chr4 (1-44)||(55268030-55268073)
chr4 (1-43)||(7037513-7037555)
chr4 (5-50)||(47014932-47014977)
chr4 (3-44)||(51377324-51377365)
chr4 (1-45)||(3222987-3223031)
chr4 (1-49)||(6126847-6126895)
chr4 (10-46)||(33093142-33093178)
chr4 (1-45)||(44368231-44368275)
chr4 (10-46)||(51717320-51717356)
chr4 (5-44)||(4914905-4914944)
chr4 (5-44)||(12638824-12638863)
chr4 (1-44)||(27001438-27001481)
chr4 (5-44)||(35017152-35017191)
chr4 (5-44)||(43168747-43168786)
chr4 (5-47)||(4896533-4896575)
chr4 (1-43)||(9032780-9032822)
chr4 (5-43)||(9776365-9776403)
chr4 (6-44)||(26440675-26440713)
chr4 (2-40)||(32303315-32303353)
chr4 (5-43)||(33438045-33438083)
chr4 (10-48)||(41262656-41262694)
chr4 (3-45)||(42815402-42815444)
chr4 (10-48)||(46173545-46173583)
chr4 (1-43)||(46480533-46480575)
chr4 (1-43)||(47105911-47105953)
chr4 (3-45)||(47288080-47288122)
chr4 (5-43)||(51039149-51039187)
chr4 (1-46)||(8026782-8026827)
chr4 (4-45)||(8455859-8455900)
chr4 (1-46)||(29577465-29577510)
chr4 (5-46)||(35661630-35661671)
chr4 (10-43)||(39241328-39241361)
chr4 (5-46)||(42853936-42853977)
chr4 (3-44)||(51359821-51359862)
chr4 (3-43)||(1816031-1816071)
chr4 (10-46)||(6290459-6290495)
chr4 (21-53)||(12241048-12241080)
chr4 (4-44)||(13267510-13267550)
chr4 (6-46)||(18568469-18568509)
chr4 (6-42)||(19603446-19603481)
chr4 (5-45)||(31221411-31221451)
chr4 (4-48)||(32901324-32901368)
chr4 (5-45)||(33278673-33278713)
chr4 (5-45)||(38864769-38864809)
chr4 (4-44)||(41495012-41495052)
chr4 (4-44)||(43864033-43864073)
chr4 (5-45)||(44272843-44272883)
chr4 (3-47)||(50890105-50890148)
chr4 (1-45)||(54803357-54803401)
chr4 (17-45)||(55899394-55899422)
[»] chr1 (37 HSPs)
chr1 (1-46)||(6829812-6829857)
chr1 (1-44)||(7371977-7372020)
chr1 (1-49)||(36669399-36669447)
chr1 (5-43)||(32938859-32938897)
chr1 (5-50)||(18610766-18610811)
chr1 (1-46)||(26585202-26585247)
chr1 (10-45)||(10384209-10384244)
chr1 (4-47)||(26547230-26547273)
chr1 (5-44)||(30439249-30439288)
chr1 (5-44)||(39669805-39669844)
chr1 (5-44)||(46910403-46910442)
chr1 (6-45)||(48325801-48325840)
chr1 (17-47)||(3826849-3826879)
chr1 (8-46)||(4906855-4906893)
chr1 (1-43)||(13813558-13813600)
chr1 (1-43)||(25995460-25995502)
chr1 (1-43)||(27578182-27578224)
chr1 (5-47)||(50226912-50226954)
chr1 (3-44)||(1689390-1689431)
chr1 (4-45)||(7078532-7078573)
chr1 (6-43)||(14442260-14442297)
chr1 (5-46)||(30772609-30772650)
chr1 (7-44)||(31427992-31428029)
chr1 (5-42)||(32966268-32966305)
chr1 (3-47)||(3762145-3762189)
chr1 (5-45)||(8934629-8934669)
chr1 (10-42)||(9882697-9882729)
chr1 (4-44)||(26101393-26101433)
chr1 (10-46)||(27687546-27687582)
chr1 (3-39)||(35224238-35224274)
chr1 (12-44)||(36439656-36439688)
chr1 (10-46)||(37843470-37843506)
chr1 (1-45)||(42256458-42256502)
chr1 (5-45)||(45042259-45042299)
chr1 (3-43)||(46281436-46281476)
chr1 (4-44)||(46902612-46902652)
chr1 (4-44)||(49425737-49425777)
[»] chr3 (45 HSPs)
chr3 (1-45)||(46344412-46344456)
chr3 (1-44)||(38944170-38944213)
chr3 (1-45)||(30400185-30400229)
chr3 (1-45)||(36818954-36818998)
chr3 (1-44)||(32931947-32931990)
chr3 (5-47)||(108427-108469)
chr3 (5-43)||(45205288-45205326)
chr3 (1-43)||(50879595-50879637)
chr3 (4-45)||(53932423-53932464)
chr3 (10-46)||(3069612-3069648)
chr3 (5-45)||(5398916-5398956)
chr3 (5-45)||(7867744-7867784)
chr3 (5-45)||(12792636-12792676)
chr3 (5-45)||(20215946-20215986)
chr3 (1-45)||(20714241-20714285)
chr3 (5-45)||(29800582-29800622)
chr3 (5-45)||(35376584-35376624)
chr3 (2-46)||(48405407-48405451)
chr3 (6-46)||(52564668-52564708)
chr3 (5-44)||(34607953-34607992)
chr3 (2-45)||(44855249-44855292)
chr3 (1-43)||(11327108-11327150)
chr3 (1-43)||(13159661-13159703)
chr3 (5-43)||(37134639-37134677)
chr3 (3-45)||(50559243-50559285)
chr3 (5-43)||(51873393-51873431)
chr3 (3-45)||(52454125-52454167)
chr3 (12-49)||(3483126-3483163)
chr3 (2-47)||(20549415-20549460)
chr3 (3-44)||(34021494-34021535)
chr3 (5-46)||(43169775-43169816)
chr3 (6-47)||(43176198-43176239)
chr3 (1-45)||(884532-884576)
chr3 (5-45)||(1901959-1901999)
chr3 (5-45)||(1911405-1911445)
chr3 (1-45)||(8254025-8254069)
chr3 (5-45)||(18169155-18169195)
chr3 (3-43)||(23163188-23163228)
chr3 (5-49)||(33256303-33256347)
chr3 (1-45)||(37585428-37585472)
chr3 (4-44)||(43409394-43409434)
chr3 (4-48)||(43441667-43441711)
chr3 (5-45)||(45528975-45529015)
chr3 (5-45)||(47849670-47849710)
chr3 (1-45)||(53473608-53473652)
[»] chr2 (40 HSPs)
chr2 (1-45)||(34144580-34144624)
chr2 (5-45)||(14140370-14140410)
chr2 (1-53)||(35171255-35171307)
chr2 (3-45)||(18531599-18531641)
chr2 (1-43)||(29893610-29893652)
chr2 (1-43)||(30487498-30487540)
chr2 (5-50)||(15283283-15283328)
chr2 (1-42)||(20974354-20974395)
chr2 (6-47)||(42607553-42607594)
chr2 (5-45)||(5167775-5167815)
chr2 (5-45)||(23391070-23391110)
chr2 (1-45)||(27307260-27307304)
chr2 (2-42)||(38246781-38246821)
chr2 (5-48)||(5067679-5067722)
chr2 (5-44)||(6365185-6365224)
chr2 (13-44)||(6884909-6884940)
chr2 (5-44)||(10288149-10288188)
chr2 (5-48)||(33296104-33296147)
chr2 (5-48)||(35792489-35792532)
chr2 (6-45)||(36132972-36133011)
chr2 (5-44)||(37966366-37966405)
chr2 (1-44)||(44484685-44484728)
chr2 (1-43)||(3196116-3196158)
chr2 (10-52)||(25801840-25801882)
chr2 (6-48)||(41040261-41040303)
chr2 (6-44)||(43520858-43520896)
chr2 (4-53)||(5031913-5031962)
chr2 (4-49)||(14857853-14857898)
chr2 (10-43)||(21490703-21490736)
chr2 (10-47)||(29795443-29795480)
chr2 (4-53)||(39737718-39737767)
chr2 (4-49)||(44085268-44085313)
chr2 (5-45)||(1889145-1889185)
chr2 (3-39)||(4059244-4059280)
chr2 (5-45)||(4738605-4738645)
chr2 (5-45)||(13466108-13466148)
chr2 (4-44)||(13553146-13553186)
chr2 (4-48)||(29168720-29168764)
chr2 (5-45)||(34139071-34139111)
chr2 (4-44)||(36909875-36909915)
[»] chr8 (29 HSPs)
chr8 (1-44)||(30927960-30928003)
chr8 (6-45)||(43419877-43419916)
chr8 (5-45)||(6004942-6004982)
chr8 (1-45)||(20288531-20288575)
chr8 (1-45)||(21075160-21075204)
chr8 (1-45)||(41746818-41746862)
chr8 (5-46)||(36497658-36497699)
chr8 (1-46)||(41273512-41273557)
chr8 (1-46)||(41293750-41293795)
chr8 (1-45)||(33817154-33817198)
chr8 (3-50)||(2621778-2621825)
chr8 (5-48)||(8841025-8841068)
chr8 (1-48)||(28156198-28156245)
chr8 (1-43)||(1065417-1065459)
chr8 (5-43)||(43873724-43873762)
chr8 (5-46)||(5359335-5359376)
chr8 (2-47)||(44064353-44064398)
chr8 (4-40)||(2952690-2952726)
chr8 (4-48)||(13592761-13592805)
chr8 (5-41)||(21648964-21649000)
chr8 (10-46)||(22852877-22852913)
chr8 (5-45)||(28927679-28927719)
chr8 (5-45)||(32725813-32725853)
chr8 (5-53)||(39719281-39719329)
chr8 (1-45)||(40380279-40380323)
chr8 (9-45)||(42047333-42047369)
chr8 (1-41)||(43186298-43186338)
chr8 (1-41)||(44001033-44001073)
chr8 (5-45)||(45101394-45101434)
[»] chr7 (38 HSPs)
chr7 (1-45)||(30864446-30864490)
chr7 (3-46)||(15564908-15564951)
chr7 (5-43)||(25200392-25200430)
chr7 (11-48)||(27778074-27778111)
chr7 (1-42)||(37325848-37325889)
chr7 (5-46)||(41966329-41966370)
chr7 (1-50)||(43255596-43255645)
chr7 (5-45)||(31274562-31274602)
chr7 (2-45)||(3040410-3040453)
chr7 (5-48)||(4971285-4971328)
chr7 (1-48)||(28548250-28548297)
chr7 (3-50)||(46829472-46829519)
chr7 (1-43)||(19880260-19880302)
chr7 (2-44)||(27164867-27164909)
chr7 (1-43)||(33050183-33050225)
chr7 (10-48)||(37856192-37856230)
chr7 (1-47)||(44511135-44511181)
chr7 (3-44)||(6110009-6110050)
chr7 (3-44)||(19896555-19896596)
chr7 (4-45)||(21822631-21822672)
chr7 (10-47)||(22330658-22330695)
chr7 (2-43)||(29162309-29162350)
chr7 (7-44)||(29355361-29355398)
chr7 (3-48)||(36533721-36533766)
chr7 (10-43)||(37832450-37832483)
chr7 (3-52)||(37899244-37899293)
chr7 (5-50)||(40693561-40693606)
chr7 (5-46)||(42276088-42276129)
chr7 (5-45)||(2414075-2414115)
chr7 (4-40)||(7458223-7458259)
chr7 (2-42)||(37173004-37173044)
chr7 (1-45)||(37385262-37385306)
chr7 (5-45)||(38023457-38023497)
chr7 (5-45)||(38096472-38096512)
chr7 (5-45)||(40077252-40077292)
chr7 (10-46)||(41985127-41985163)
chr7 (3-43)||(42598239-42598279)
chr7 (4-44)||(43079664-43079704)
[»] chr6 (17 HSPs)
chr6 (2-50)||(27334851-27334899)
chr6 (2-50)||(27395591-27395639)
chr6 (1-43)||(2056783-2056825)
chr6 (1-45)||(3339528-3339572)
chr6 (5-45)||(11785353-11785393)
chr6 (5-45)||(30796108-30796148)
chr6 (5-44)||(9954547-9954586)
chr6 (10-45)||(12441536-12441571)
chr6 (1-43)||(3660382-3660424)
chr6 (1-43)||(25995442-25995484)
chr6 (1-43)||(26094905-26094947)
chr6 (2-48)||(31883334-31883380)
chr6 (6-43)||(2163702-2163739)
chr6 (6-43)||(2175335-2175372)
chr6 (5-42)||(12501475-12501512)
chr6 (5-45)||(1434697-1434737)
chr6 (4-40)||(3401087-3401123)
[»] chr5 (32 HSPs)
chr5 (1-44)||(9594477-9594520)
chr5 (1-44)||(12512802-12512845)
chr5 (1-43)||(3263537-3263579)
chr5 (1-43)||(9599757-9599799)
chr5 (1-43)||(28501592-28501634)
chr5 (1-43)||(30574406-30574448)
chr5 (2-43)||(15918020-15918061)
chr5 (5-45)||(125090-125130)
chr5 (1-45)||(27271080-27271124)
chr5 (5-45)||(38500941-38500981)
chr5 (1-44)||(4954465-4954508)
chr5 (1-52)||(32634699-32634750)
chr5 (5-43)||(12718413-12718451)
chr5 (5-43)||(12779639-12779677)
chr5 (10-44)||(14508195-14508229)
chr5 (2-44)||(25345339-25345381)
chr5 (3-48)||(11148506-11148551)
chr5 (4-45)||(14914370-14914411)
chr5 (4-45)||(28811427-28811468)
chr5 (4-53)||(30838397-30838446)
chr5 (3-56)||(32872929-32872982)
chr5 (4-44)||(2050926-2050966)
chr5 (3-43)||(3109618-3109658)
chr5 (5-45)||(4434480-4434520)
chr5 (3-43)||(4719650-4719690)
chr5 (5-45)||(5996665-5996705)
chr5 (4-44)||(8959159-8959199)
chr5 (10-46)||(23991172-23991208)
chr5 (5-45)||(29803223-29803263)
chr5 (1-45)||(33823722-33823766)
chr5 (5-45)||(34428158-34428198)
chr5 (5-45)||(36572689-36572729)
[»] scaffold0662 (1 HSPs)
scaffold0662 (5-50)||(1071-1116)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-45)||(1525-1569)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-45)||(36000-36040)
[»] scaffold0174 (1 HSPs)
scaffold0174 (5-40)||(34827-34862)
[»] scaffold0592 (1 HSPs)
scaffold0592 (2-52)||(901-951)
[»] scaffold0154 (1 HSPs)
scaffold0154 (5-43)||(19724-19762)
[»] scaffold0148 (1 HSPs)
scaffold0148 (7-49)||(9447-9489)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-43)||(18595-18637)
scaffold0011 (5-45)||(219697-219737)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-43)||(147285-147327)
[»] scaffold0286 (1 HSPs)
scaffold0286 (6-43)||(18670-18707)
[»] scaffold0130 (1 HSPs)
scaffold0130 (4-45)||(25701-25742)
[»] scaffold0057 (1 HSPs)
scaffold0057 (5-45)||(38877-38917)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-45)||(204474-204518)
[»] scaffold0003 (1 HSPs)
scaffold0003 (13-45)||(88806-88838)


Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 44 - 289
Target Start/End: Complemental strand, 42030499 - 42030254
Alignment:
Q  44 ttattaataaactcaccgcaccaaacatattattaattcgttttccatagaaacaccaaccaaacacattttaaagatttatgttttcactttgaattat 143  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  42030499 ttattaataaactcaccgcaccaaacatactattaattcgttttccatagaaacaccaaccaaacacactttaaatatttatgttttcactttgaattat 42030400  T
Q  144 gagctgaattcggatatgttattgaaacaaatgacttaaatgagatgaaacatgtctcttttaatttaactataatttcagattcgatcataatttttga 243  Q
    |||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | ||||| | ||| |||||| ||||||||    
T  42030399 gagctgaattcgtacatgttattgaaacaaatgacttaaataagataaaacatgtctcttttaatttaaccagaattttaaatttgatcatgatttttga 42030300  T
Q  244 catgatgcattgttaaaaattttaggaagagttttatgtccgtagt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42030299 catgatgcattgttaaaaattttaggaagagttttatgtccgtagt 42030254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24235362 - 24235317
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  24235362 gtacaaaaattgtcacaaattgattgtacaaatatcatttctctta 24235317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 53662457 - 53662502
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  53662457 gtacaaaaattgttacaaaatagttgtacaaatatcatttctctta 53662502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 940292 - 940332
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  940292 aaaaattgtcacaaaatagttgtacaaatatcatttctctt 940332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1796408 - 1796360
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    |||||||| |||||||||||| |||||||||||||||||||||| ||||    
T  1796408 gtacaaaagttgtcacaaattggttgtacaaatatcatttctctaatta 1796360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5208356 - 5208400
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  5208356 gtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 5208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 52487299 - 52487342
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  52487299 tacaaaaattatcacaaattagttgtacaaatatcatttatctt 52487342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 55268030 - 55268073
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  55268030 gtacaaaagttgtcacaaattggttgtacaaatatcatttctct 55268073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7037513 - 7037555
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  7037513 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 7037555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 47014977 - 47014932
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||    
T  47014977 aaaagttgtcacaaaatagttgtacaaatatcatttctctaattaa 47014932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 51377324 - 51377365
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  51377324 acaaaagttgtcacaaattggttgtacaaatatcatttctct 51377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3223031 - 3222987
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||    
T  3223031 gtacaaaagttgtcacaaattgattgtacaaatatcatttctctt 3222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6126895 - 6126847
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||||||||    
T  6126895 gtacaaaaattgtcataaaatagatgtacaaatatgatttctcttatta 6126847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 33093142 - 33093178
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33093142 ttgtcacaaaatagttgtacaaatatcatttctctta 33093178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44368231 - 44368275
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||    
T  44368231 gtacaaaagttgtcacaaattgattgtacaaatatcatttctctt 44368275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 51717320 - 51717356
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||| ||||||||||||||||||||||||    
T  51717320 ttgtcacaaattggttgtacaaatatcatttctctta 51717356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 4914944 - 4914905
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  4914944 aaaaattgtcacaaaatagttgttcaaatatcatttctct 4914905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 12638863 - 12638824
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  12638863 aaaaattgttacaaagtagttgtacaaatatcatttctct 12638824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 27001438 - 27001481
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||| || |||||||||||| ||||||||||||||||||||||    
T  27001438 gtacagaagttgtcacaaattggttgtacaaatatcatttctct 27001481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 35017191 - 35017152
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  35017191 aaaagttgtcacaaaatagttgtacaaatatcatttctct 35017152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 43168747 - 43168786
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  43168747 aaaaattgtcacaaaatggttgtacaaatatcatttctct 43168786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 4896533 - 4896575
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||| |||||||||| | |||||||||||||||||||||||||    
T  4896533 aaaagttgtcacaaagtggttgtacaaatatcatttctcttat 4896575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9032822 - 9032780
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  9032822 gtacaaaagttgtcacaaattgattgtacaaatatcatttctc 9032780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 9776365 - 9776403
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  9776365 aaaaattgtcaaaaaatagttgtacaaatatcatttctc 9776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 26440713 - 26440675
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  26440713 aaaattgtcacaaagtggttgtacaaatatcatttctct 26440675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 32303315 - 32303353
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcattt 40  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  32303315 tacaaaaattatcacaaaatagttgtacaaatatcattt 32303353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33438083 - 33438045
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  33438083 aaaaattgtcacaaattggttttacaaatatcatttctc 33438045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 41262656 - 41262694
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||||| || |||||||||||||||||||||||||    
T  41262656 ttgtcacaaaataattgtacaaatatcatttctcttatt 41262694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 42815444 - 42815402
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||| |||| ||||| |||||||||||||||||||||||||    
T  42815444 acaaaagttgttacaaaatagttgtacaaatatcatttctctt 42815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 46173583 - 46173545
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  46173583 ttgtcacaaagtggttgtacaaatatcatttctcttatt 46173545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 46480533 - 46480575
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||||  ||||||||| ||||||||||||||||||||    
T  46480533 gtacaaaaattaccacaaattaattgtacaaatatcatttctc 46480575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47105953 - 47105911
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| || |||||||||| ||||||||||||||||||||    
T  47105953 gtacaaaagttatcacaaattaattgtacaaatatcatttctc 47105911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 47288122 - 47288080
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||| ||||| | |||||||||||||||||||||||    
T  47288122 acaaaaattgttacaaaatggttgtacaaatatcatttctctt 47288080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 51039149 - 51039187
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  51039149 aaaagttgtcacaaagtagttgtacaaatatcatttctc 51039187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8026782 - 8026827
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||| ||||||||||||  ||||| |||||||||||||||||    
T  8026782 gtacaaaagttgtcacaaattgattgtataaatatcatttctctta 8026827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 8455900 - 8455859
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||| |||||||||| |||||||||||||| ||||||||||    
T  8455900 caaaagttgtcacaaaatagttgtacaaataacatttctctt 8455859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29577465 - 29577510
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||||   ||| ||||||||||||||||||||||||||    
T  29577465 gtacaaaaattgtacaaaaatagttgtacaaatatcatttctctta 29577510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 35661630 - 35661671
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||||||| ||| | ||||||||||||||||||||||||    
T  35661630 aaaaattgtcataaaatggttgtacaaatatcatttctctta 35661671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 39241328 - 39241361
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||||| |||||||||||||||||||||    
T  39241328 ttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 42853977 - 42853936
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||| |||||| ||| ||||||||||||||||||||||||||    
T  42853977 aaaagttgtcaaaaaatagttgtacaaatatcatttctctta 42853936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 51359821 - 51359862
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||| |||||||||| | ||||||||||||||||||||||    
T  51359821 acaaaagttgtcacaaaatggttgtacaaatatcatttctct 51359862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 1816031 - 1816071
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  1816031 acaaaaattgtcacaaaatagatgttcaaatatcatttctc 1816071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 6290495 - 6290459
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  6290495 ttgttacaaaatagttgtacaaatatcatttctctta 6290459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 12241080 - 12241048
Alignment:
Q  21 tagttgtacaaatatcatttctcttattaataa 53  Q
    |||||||||||||||||||||||||| ||||||    
T  12241080 tagttgtacaaatatcatttctcttaataataa 12241048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 13267510 - 13267550
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  13267510 caaaatttgtcacaaaatggttgtacaaatatcatttctct 13267550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 18568469 - 18568509
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||||| || || ||||||||||||||||||||    
T  18568469 aaaattgtcacaaaataattctacaaatatcatttctctta 18568509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 19603446 - 19603481
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttct 42  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19603446 aaaattgtcacaaat-agttgtacaaatatcatttct 19603481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 31221451 - 31221411
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| ||||||||||||  ||||||||||||||||||||||    
T  31221451 aaaagttgtcacaaattgattgtacaaatatcatttctctt 31221411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 32901368 - 32901324
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||| ||| ||| ||||||||||||||||||||||| ||||    
T  32901368 caaaaattatcaaaaaatagttgtacaaatatcatttctcatatt 32901324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 33278713 - 33278673
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| ||||||| |||||||||||||||||    
T  33278713 aaaagttgtcacaaaatagttgttcaaatatcatttctctt 33278673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 38864769 - 38864809
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  38864769 aaaagttgtcacaaaataattgtacaaatatcatttctctt 38864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 41495052 - 41495012
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||| |||||||| | ||||||||||||||||||||||||    
T  41495052 caaaagttgtcacataatagttgtacaaatatcatttctct 41495012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 43864073 - 43864033
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  43864073 caaaaattgtaccaaaatagttgtacaaatatcatttctct 43864033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 44272843 - 44272883
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||| ||| |||||||||||||||||||||||||    
T  44272843 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 44272883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 50890105 - 50890148
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||    
T  50890105 acaaaagttgtcaaaaat-agttgtacaaatatcatttctcttat 50890148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54803357 - 54803401
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||   |||| |||||||||||||||||||||||||    
T  54803357 gtacaaaaattgcaccaaaatagttgtacaaatatcatttctctt 54803401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 55899422 - 55899394
Alignment:
Q  17 aaattagttgtacaaatatcatttctctt 45  Q
    |||||||||||||||||||||||||||||    
T  55899422 aaattagttgtacaaatatcatttctctt 55899394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6829812 - 6829857
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  6829812 gtacaaaagttgtcacaaattagttgtacaaatatcatttctctta 6829857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7371977 - 7372020
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  7371977 gtacaaaaattgtcataaattagttgtacaaatatcatttctct 7372020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36669399 - 36669447
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  36669399 gtacaaaaattatcacaaattgattgtacaaatatcatttctcttatta 36669447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 32938897 - 32938859
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  32938897 aaaaattgtcacaaattaattgtacaaatatcatttctc 32938859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 18610811 - 18610766
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||    
T  18610811 aaaagttgtcacaaaatagttgtacaaatatcatttctctttttaa 18610766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26585202 - 26585247
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||| || ||||||| ||||||||||||||||||||||||||    
T  26585202 gtacaaaagttatcacaaaatagttgtacaaatatcatttctctta 26585247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 10384244 - 10384209
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||| |||||||||||||||||||||||||    
T  10384244 ttgtcacaaagtagttgtacaaatatcatttctctt 10384209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 26547273 - 26547230
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||||||||||| ||  |||||||||||||||||||||||    
T  26547273 caaaaattgtcacaaaatatatgtacaaatatcatttctcttat 26547230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 30439288 - 30439249
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||| ||||| ||||||||||||||||||||||    
T  30439288 aaaaattgtcataaattggttgtacaaatatcatttctct 30439249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 39669844 - 39669805
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  39669844 aaaaattgtcacaaaatggttgtacaaatatcatttctct 39669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 46910442 - 46910403
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  46910442 aaaaattgtcacaaaatagttgtacatatatcatttctct 46910403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 48325801 - 48325840
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  48325801 aaaattgtcacaaaatggttgtacaaatatcatttctctt 48325840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 3826849 - 3826879
Alignment:
Q  17 aaattagttgtacaaatatcatttctcttat 47  Q
    |||||||||||||||||||||||||||||||    
T  3826849 aaattagttgtacaaatatcatttctcttat 3826879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 4906855 - 4906893
Alignment:
Q  8 aattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  4906855 aattgtcacaaaatagttgtgcaaatatcatttctctta 4906893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13813600 - 13813558
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||| || |||||||||||| |||||||||||||||||||||    
T  13813600 gtacagaagttgtcacaaattggttgtacaaatatcatttctc 13813558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25995502 - 25995460
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  25995502 gtacaaaacttgtcacaaattgattgtacaaatatcatttctc 25995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27578224 - 27578182
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||    
T  27578224 gtacaaaagttgtcccaaattaattgtacaaatatcatttctc 27578182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 50226912 - 50226954
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||| |||||||||| | |||||||||||||||||||||||||    
T  50226912 aaaagttgtcacaaagtggttgtacaaatatcatttctcttat 50226954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1689431 - 1689390
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||| | ||| ||||||||||||||||||||||||    
T  1689431 acaaaaattgttataaaatagttgtacaaatatcatttctct 1689390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7078532 - 7078573
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||| |||||||||| ||| |||||||||||||||||||||    
T  7078532 caaaagttgtcacaaaatagatgtacaaatatcatttctctt 7078573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 14442297 - 14442260
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  14442297 aaaattgtcacaaaatagttgtacaaatatcatctctc 14442260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 30772650 - 30772609
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||||||||||| |||||  |||||||||||||||||||    
T  30772650 aaaaattgtcacaaaatagttagacaaatatcatttctctta 30772609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 31427992 - 31428029
Alignment:
Q  7 aaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  31427992 aaattgtcacaaagtggttgtacaaatatcatttctct 31428029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 32966305 - 32966268
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttct 42  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  32966305 aaaaattgtcacaaagtggttgtacaaatatcatttct 32966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 3762145 - 3762189
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    ||||||||  |||||||||||||||| ||||||| ||||||||||    
T  3762145 acaaaaataatcacaaattagttgtataaatatcttttctcttat 3762189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 8934629 - 8934669
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| ||||||||||||||| |||||||||    
T  8934629 aaaagttgtcacaaaatagttgtacaaatataatttctctt 8934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 9882697 - 9882729
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttct 42  Q
    |||||||||| ||||||||||||||||||||||    
T  9882697 ttgtcacaaaatagttgtacaaatatcatttct 9882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 26101433 - 26101393
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| ||||||| || |||||||||||||||||||||    
T  26101433 caaaaattatcacaaaataattgtacaaatatcatttctct 26101393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 27687546 - 27687582
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||| | ||||||||||||||||||||||||    
T  27687546 ttgtcacaaaatggttgtacaaatatcatttctctta 27687582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 35224238 - 35224274
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatt 39  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  35224238 acaaaaattgtaacaaaatagttgtacaaatatcatt 35224274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 36439688 - 36439656
Alignment:
Q  12 gtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||||| ||||||||||||||||||||||    
T  36439688 gtcacaaattggttgtacaaatatcatttctct 36439656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 37843470 - 37843506
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  37843470 ttgtcaaaaagtagttgtacaaatatcatttctctta 37843506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42256502 - 42256458
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| ||| |||||||||| | |||||||||||||||||||||||    
T  42256502 gtaccaaagttgtcacaaaatggttgtacaaatatcatttctctt 42256458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 45042299 - 45042259
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||| | ||| |||||||||||||||||||||||||    
T  45042299 aaaaattgttagaaaatagttgtacaaatatcatttctctt 45042259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 46281476 - 46281436
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||| | ||||| |||||||||||||||||||||||    
T  46281476 acaaaaattattacaaaatagttgtacaaatatcatttctc 46281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 46902652 - 46902612
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  46902652 caaaaattgtcacaaaatagttatacaagtatcatttctct 46902612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 49425777 - 49425737
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  49425777 caaaagttgtcacaaagtggttgtacaaatatcatttctct 49425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 46344456 - 46344412
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  46344456 gtacaaaaattgtaacaaattagttgtacaaatatcatttctctt 46344412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38944170 - 38944213
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  38944170 gtacaaaagttgtcacaaattagttgtacaaatatcatttctct 38944213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30400185 - 30400229
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  30400185 gtacaaaagttgtcacaaatttgttgtacaaatatcatttctctt 30400229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36818998 - 36818954
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  36818998 gtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 36818954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32931947 - 32931990
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  32931947 gtacaaaagttgtcacaaattggttgtacaaatatcatttctct 32931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 108469 - 108427
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    ||||||||||||||| | |||||||||||||||||||||||||    
T  108469 aaaaattgtcacaaagtggttgtacaaatatcatttctcttat 108427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 45205326 - 45205288
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  45205326 aaaaattgtcacaaaatagttgtacaaatatcatttctc 45205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 50879637 - 50879595
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  50879637 gtacaaaagttgtcacaatttagttgtacaaatatcatttctc 50879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 53932423 - 53932464
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  53932423 caaaaattgtcacaaaatggttgtacaaatatcatttctctt 53932464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 3069612 - 3069648
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3069612 ttgtcacaaattggttgtacaaatatcatttctctta 3069648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 5398956 - 5398916
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  5398956 aaaaattgtcacaaagtggttgtacaaatatcatttctctt 5398916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 7867744 - 7867784
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  7867744 aaaagttgtcacaaaatagttgtacaaatatcatttctctt 7867784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 12792676 - 12792636
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  12792676 aaaaattgtcacaaagtggttgtacaaatatcatttctctt 12792636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 20215986 - 20215946
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  20215986 aaaaattgtcacaaagtggttgtacaaatatcatttctctt 20215946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20714285 - 20714241
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||| || |||||||||||| |||||||||||||||||||||||    
T  20714285 gtacagaagttgtcacaaattggttgtacaaatatcatttctctt 20714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 29800582 - 29800622
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  29800582 aaaaattatcacaaagtagttgtacaaatatcatttctctt 29800622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 35376584 - 35376624
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  35376584 aaaaattgtcacaaaatggttgtacaaatatcatttctctt 35376624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 48405451 - 48405407
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||    
T  48405451 tacaaaagttgtcacaaaatggttgtacaaatatcatttctctta 48405407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 52564668 - 52564708
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  52564668 aaaattgtcacaaaatggttgtacaaatatcatttctctta 52564708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 34607953 - 34607992
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  34607953 aaaaattgtcacaaagtggttgtacaaatatcatttctct 34607992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 44855292 - 44855249
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||    
T  44855292 tacaaaagttgtcacaaaatagttatacaaatatcatttctctt 44855249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11327150 - 11327108
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||| | |||||||||||||||||||||    
T  11327150 gtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13159703 - 13159661
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||    
T  13159703 gtacaaaagttgtcacaaattaattgtacagatatcatttctc 13159661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 37134639 - 37134677
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  37134639 aaaaattgtcataaaatagttgtacaaatatcatttctc 37134677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 50559243 - 50559285
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||| |||||| ||| |||||||||||||||||||||||||    
T  50559243 acaaaagttgtcaaaaaatagttgtacaaatatcatttctctt 50559285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 51873431 - 51873393
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  51873431 aaaaattgtcacaaaatagttgttcaaatatcatttctc 51873393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 52454125 - 52454167
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||| ||||||||||||  ||||||||||||||||||||||    
T  52454125 acaaaagttgtcacaaattgattgtacaaatatcatttctctt 52454167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 3483163 - 3483126
Alignment:
Q  12 gtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    |||||||| | |||||||||||||||||||||||||||    
T  3483163 gtcacaaagtggttgtacaaatatcatttctcttatta 3483126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 20549415 - 20549460
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  20549415 tacaaaaattatcataaaatagatgtacaaatatcatttctcttat 20549460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 34021494 - 34021535
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||| ||||||||||||  |||||||||||||||||||||    
T  34021494 acaaaagttgtcacaaattgattgtacaaatatcatttctct 34021535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 43169775 - 43169816
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  43169775 aaaagttgtcacaaaatggttgtacaaatatcatttctctta 43169816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 43176239 - 43176198
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||| ||||| | |||||||||||||||||||||||||    
T  43176239 aaaattgtaacaaagtggttgtacaaatatcatttctcttat 43176198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 884576 - 884532
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||| | ||||| |||||||||||||||||||||||||    
T  884576 gtaccaaaattataacaaaatagttgtacaaatatcatttctctt 884532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1901959 - 1901999
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  1901959 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 1901999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1911405 - 1911445
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  1911405 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 1911445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8254069 - 8254025
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| ||| |||||||||| | |||||||||||||||||||||||    
T  8254069 gtaccaaagttgtcacaaaatggttgtacaaatatcatttctctt 8254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 18169195 - 18169155
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  18169195 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 18169155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 23163188 - 23163228
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||| |||||||||||| ||||||||||||| |||||||    
T  23163188 acaaaagttgtcacaaattggttgtacaaatatgatttctc 23163228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 33256347 - 33256303
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||    
T  33256347 aaaaattgtctcaaaatggttgtataaatatcatttctcttatta 33256303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37585472 - 37585428
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  37585472 gtacaaaaattgtcataaaatagatgtacaaatataatttctctt 37585428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 43409394 - 43409434
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| ||||||| | ||||||||||||||||||||||    
T  43409394 caaaaattatcacaaagtggttgtacaaatatcatttctct 43409434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 43441711 - 43441667
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||||||||| | | ||||||||||||||||||||| ||||    
T  43441711 caaaaattgtcacataatggttgtacaaatatcatttctcatatt 43441667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 45528975 - 45529015
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||| ||| |||||||||||||||||||||||||    
T  45528975 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 45529015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 47849710 - 47849670
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  47849710 aaaaattatcacaaaatggttgtacaaatatcatttctctt 47849670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 53473652 - 53473608
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| || |||||||||  ||||||||||||||||||||||    
T  53473652 gtacaaaagttatcacaaattgattgtacaaatatcatttctctt 53473608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34144580 - 34144624
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  34144580 gtacaaaaattgtcacaaattggttgtacaaatatcatttctctt 34144624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 14140370 - 14140410
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  14140370 aaaagttgtcacaaattagttgtacaaatatcatttctctt 14140410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35171255 - 35171307
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttattaataa 53  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||| ||||    
T  35171255 gtaccaaaattgtcacaaaatggttgtacaaatatcatttctcttatttataa 35171307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 18531641 - 18531599
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  18531641 acaaaaattgtcaaaaaatagttgtacaaatatcatttctctt 18531599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29893652 - 29893610
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| || |||||||||||||||||||||||||||||||    
T  29893652 gtacaaaagttatcacaaattagttgtacaaatatcatttctc 29893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30487498 - 30487540
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  30487498 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 30487540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15283283 - 15283328
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||    
T  15283283 aaaaattgtcacaaagtggttgtacaaatatcatttctcttcttaa 15283328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20974395 - 20974354
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttct 42  Q
    |||||||| ||||||||||||||||||| |||||||||||||    
T  20974395 gtacaaaagttgtcacaaattagttgtaaaaatatcatttct 20974354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 42607553 - 42607594
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  42607553 aaaattgtcacaaaataattgtacaaatatcatttctcttat 42607594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 5167775 - 5167815
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  5167775 aaaaattgtcacaaagtggttgtacaaatatcatttctctt 5167815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 23391110 - 23391070
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  23391110 aaaaattatcacaaattaattgtacaaatatcatttctctt 23391070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27307260 - 27307304
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||    
T  27307260 gtacaaaagttgtcacaaattgattgtacaaatatcatttctctt 27307304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 38246781 - 38246821
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttct 42  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  38246781 tacaaaaattgtcacaaattgattgtacaaatatcatttct 38246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 5067679 - 5067722
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||    
T  5067679 aaaagttgtcacaaagtagatgtacaaatatcatttctcttatt 5067722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 6365224 - 6365185
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  6365224 aaaaattgtcacaaagtggttgtacaaatatcatttctct 6365185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 44
Target Start/End: Complemental strand, 6884940 - 6884909
Alignment:
Q  13 tcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||||||||||||||    
T  6884940 tcacaaattagttgtacaaatatcatttctct 6884909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 10288188 - 10288149
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  10288188 aaaaattatcacaaaatagttgtacaaatatcatttctct 10288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 33296104 - 33296147
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
T  33296104 aaaagttgtcacaaagtggttgtacaaatatcatttctcttatt 33296147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 35792489 - 35792532
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||    
T  35792489 aaaaattatcacaaagttgttgtacaaatatcatttctcttatt 35792532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 36133011 - 36132972
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  36133011 aaaattgtcacaaagtggttgtacaaatatcatttctctt 36132972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 37966405 - 37966366
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  37966405 aaaagttgtcacaaattggttgtacaaatatcatttctct 37966366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44484685 - 44484728
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||    
T  44484685 gtacaaaaattgttacaaaatggttgtacaaatatcatttctct 44484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3196116 - 3196158
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||||||  ||||||||||||||||||||    
T  3196116 gtacaaaagttgtcacaaattgattgtacaaatatcatttctc 3196158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 25801840 - 25801882
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctcttattaata 52  Q
    |||||||||||| ||||||||||||||||||||| | ||||||    
T  25801840 ttgtcacaaattggttgtacaaatatcatttctcatcttaata 25801882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 41040303 - 41040261
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||||||||| | ||||||||||||||||||||| ||||    
T  41040303 aaaattgtcacaaagtggttgtacaaatatcatttctcctatt 41040261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 43520896 - 43520858
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  43520896 aaaattgtcataaattagttgaacaaatatcatttctct 43520858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 5031962 - 5031913
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttattaataa 53  Q
    ||||| |||| ||||| | |||||||||||||||||||||||| ||||||    
T  5031962 caaaagttgttacaaaatggttgtacaaatatcatttctcttaataataa 5031913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 14857853 - 14857898
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    ||||||||||| |||| | | |||||||||||||||||||||||||    
T  14857853 caaaaattgtcccaaaatgggtgtacaaatatcatttctcttatta 14857898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 21490736 - 21490703
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||| |||||||||||||||||||||||    
T  21490736 ttgtcacaaagtagttgtacaaatatcatttctc 21490703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 29795480 - 29795443
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||||| | |||||||||||||||||||||||||    
T  29795480 ttgtcacaaaatggttgtacaaatatcatttctcttat 29795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 39737718 - 39737767
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttattaataa 53  Q
    ||||| |||| | ||||| |||||||||||||||||||||||||| ||||    
T  39737718 caaaagttgttagaaattggttgtacaaatatcatttctcttatttataa 39737767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 44085313 - 44085268
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    |||||||||||||||| || ||||| ||||||||||| ||||||||    
T  44085313 caaaaattgtcacaaaataattgtataaatatcatttatcttatta 44085268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 1889185 - 1889145
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||| ||| | |||||||||||||||||||||||    
T  1889185 aaaaattgtcagaaagtggttgtacaaatatcatttctctt 1889145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 4059280 - 4059244
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatt 39  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  4059280 acaaaaattgtcacatattagttatacaaatatcatt 4059244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 4738605 - 4738645
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  4738605 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 4738645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 13466108 - 13466148
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||| | ||||| |||||||||||||||||||||||    
T  13466108 aaaaattgttagaaattggttgtacaaatatcatttctctt 13466148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 13553186 - 13553146
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| ||||||| | ||||||||||||||||||||||    
T  13553186 caaaaattatcacaaagtggttgtacaaatatcatttctct 13553146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 29168764 - 29168720
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    ||||| |||||| ||| | ||||||||||||||||||||||||||    
T  29168764 caaaagttgtcaaaaaatggttgtacaaatatcatttctcttatt 29168720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 34139071 - 34139111
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  34139071 aaaaattatcacaaagtagatgtacaaatatcatttctctt 34139111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 36909875 - 36909915
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||| |||||||||| | ||||||||||||||||||||||    
T  36909875 caaaagttgtcacaaaatggttgtacaaatatcatttctct 36909915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30927960 - 30928003
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  30927960 gtacaaaaattgtcacaaattggttgtacaaatatcatttctct 30928003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 43419916 - 43419877
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43419916 aaaattgtcacaaattagttgtacaaatatcatttctctt 43419877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 6004982 - 6004942
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  6004982 aaaaattgtcacaaagtagttgtacaaatatcatttctctt 6004942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20288575 - 20288531
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  20288575 gtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 20288531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21075204 - 21075160
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  21075204 gtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 21075160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41746862 - 41746818
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  41746862 gtacaaaagttgtcacagattagttgtacaaatatcatttctctt 41746818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 36497699 - 36497658
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  36497699 aaaagttgtcacaaaatagttgtacaaatatcatttctctta 36497658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41273557 - 41273512
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||    
T  41273557 gtacaaaagttgtcacaaattgtttgtacaaatatcatttctctta 41273512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41293750 - 41293795
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||    
T  41293750 gtacaaaagttgtcacaaattggttgtaaaaatatcatttctctta 41293795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33817198 - 33817154
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||    
T  33817198 gtacaaaaattgttacaaattgattgtacaaatatcatttctctt 33817154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 2621825 - 2621778
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    |||||| || |||||||||||||||| |||||||||||||||| ||||    
T  2621825 acaaaagttatcacaaattagttgtataaatatcatttctctttttaa 2621778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 8841068 - 8841025
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||    
T  8841068 aaaaattctcacaaagtggttgtacaaatatcatttctcttatt 8841025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28156245 - 28156198
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||||||||  |||| | ||||||||||||||||||||||||||    
T  28156245 gtacaaaaattgtaccaaaatggttgtacaaatatcatttctcttatt 28156198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1065459 - 1065417
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||| || |||||||||||| |||||||||||||||||||||    
T  1065459 gtacagaagttgtcacaaattggttgtacaaatatcatttctc 1065417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 43873724 - 43873762
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  43873724 aaaaattgtcacaaaatggttgtacaaatatcatttctc 43873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 5359376 - 5359335
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||||||| ||| |||||||| |||||||||||||||||    
T  5359376 aaaaattgtcataaagtagttgtataaatatcatttctctta 5359335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 44064398 - 44064353
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||||||||||||| ||| ||| |||||||||||| ||||||    
T  44064398 tacaaaaattgtcacaaaatagatgttcaaatatcatttatcttat 44064353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 2952690 - 2952726
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcattt 40  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  2952690 caaaaatcgtcacaaaatagttgtacaaatatcattt 2952726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 13592805 - 13592761
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    ||||| |||||| ||| ||| ||||||||||||||||||||||||    
T  13592805 caaaagttgtcaaaaaataggtgtacaaatatcatttctcttatt 13592761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 21648964 - 21649000
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttc 41  Q
    |||| |||||||||||| |||||||||||||||||||    
T  21648964 aaaagttgtcacaaattggttgtacaaatatcatttc 21649000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 22852877 - 22852913
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||| | ||||||||||||||||||||||||    
T  22852877 ttgtcacaaagtggttgtacaaatatcatttctctta 22852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 28927719 - 28927679
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  28927719 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 28927679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 32725813 - 32725853
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  32725813 aaaaattatcacaaagtggttgtacaaatatcatttctctt 32725853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 39719281 - 39719329
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttattaataa 53  Q
    |||| ||||||||||||  ||||||||||||||||||| ||| ||||||    
T  39719281 aaaagttgtcacaaattgattgtacaaatatcatttcttttagtaataa 39719329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40380323 - 40380279
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||| ||| ||| |||||||||||||||||||||    
T  40380323 gtacaaaagttgtcataaaatagatgtacaaatatcatttctctt 40380279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 42047369 - 42047333
Alignment:
Q  9 attgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||| |||| |||||||||||||||||||||||||    
T  42047369 attgtcccaaagtagttgtacaaatatcatttctctt 42047333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43186338 - 43186298
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttc 41  Q
    ||||||||||| ||||||| || ||||||||||||||||||    
T  43186338 gtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44001073 - 44001033
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttc 41  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  44001073 gtacaaaaattgtatcaaaatagttgtacaaatatcatttc 44001033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 45101434 - 45101394
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  45101434 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 45101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30864446 - 30864490
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  30864446 gtacaaaagttgtcacaaattggttgtacaaatatcatttctctt 30864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 15564951 - 15564908
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||||| |||| ||||||||||||||||||||||||||    
T  15564951 acaaaaattgtcgcaaaatagttgtacaaatatcatttctctta 15564908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 25200392 - 25200430
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25200392 aaaaattgtcacaaattggttgtacaaatatcatttctc 25200430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 27778111 - 27778074
Alignment:
Q  11 tgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  27778111 tgtcacaaagtagttgtacaaatatcatttctcttatt 27778074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37325848 - 37325889
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttct 42  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  37325848 gtacaaaagttgtcacaaattggttgtacaaatatcatttct 37325889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 41966370 - 41966329
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  41966370 aaaaattgtcacaaagtggttgtacaaatatcatttctctta 41966329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43255596 - 43255645
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    ||||||||||||||||||| || |||||||||||||||| ||||| ||||    
T  43255596 gtacaaaaattgtcacaaaataattgtacaaatatcattactcttgttaa 43255645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 31274562 - 31274602
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  31274562 aaaagttgtcacaaattggttgtacaaatatcatttctctt 31274602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 3040453 - 3040410
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||    
T  3040453 tacaaaagttgtcacaaattggttgtacaaatataatttctctt 3040410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 4971328 - 4971285
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||| |||||||||| | ||||||||||||||||||||||||||    
T  4971328 aaaagttgtcacaaaatggttgtacaaatatcatttctcttatt 4971285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28548250 - 28548297
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||| ||||  |||| ||||||||||||||||||||||||||||    
T  28548250 gtacaaaagttgtaccaaaatagttgtacaaatatcatttctcttatt 28548297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 46829519 - 46829472
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    ||||||||||| ||||| | ||||||||||||||||||||||| ||||    
T  46829519 acaaaaattgttacaaaatggttgtacaaatatcatttctctttttaa 46829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19880260 - 19880302
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||||||| ||||||||||    
T  19880260 gtacaaaagttgtcacaaattggttgtacaaacatcatttctc 19880302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 27164867 - 27164909
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||| ||||||||||||  |||||||||||||||||||||    
T  27164867 tacaaaagttgtcacaaattgattgtacaaatatcatttctct 27164909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33050225 - 33050183
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||| | |||||||||||||||||||||    
T  33050225 gtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 33050183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 37856192 - 37856230
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  37856192 ttgtcacaaaatggttgtacaaatatcatttctcttatt 37856230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44511181 - 44511135
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||| |||||||||| | ||||||| |||||||||||||||||    
T  44511181 gtacaaaagttgtcacaaaatggttgtacgaatatcatttctcttat 44511135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 6110009 - 6110050
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||||| | ||||||||| ||||||||||||    
T  6110009 acaaaaattgtcacaaaatggttgtacaattatcatttctct 6110050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 19896596 - 19896555
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||| | | ||||||||||||||||||||||||||||    
T  19896596 acaaaaattctaataaattagttgtacaaatatcatttctct 19896555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 21822631 - 21822672
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||||||||| ||| ||| |||||||||||||||||    
T  21822631 caaaaattgtcacaaaatagatgttcaaatatcatttctctt 21822672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 22330658 - 22330695
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctcttat 47  Q
    |||||||||| | |||||||||||||||||||||||||    
T  22330658 ttgtcacaaagtggttgtacaaatatcatttctcttat 22330695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 29162309 - 29162350
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||| ||||||||||||  ||||||||||||||||||||    
T  29162309 tacaaaagttgtcacaaattgattgtacaaatatcatttctc 29162350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 29355398 - 29355361
Alignment:
Q  7 aaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  29355398 aaattgtcacaaaatagttgtacagatatcatttctct 29355361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 36533766 - 36533721
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    ||||||||||||| ||| |||||| |||||||| ||||||||||||    
T  36533766 acaaaaattgtcaaaaaatagttgaacaaatattatttctcttatt 36533721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 43
Target Start/End: Complemental strand, 37832483 - 37832450
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||| |||||||||||||||||||||||    
T  37832483 ttgtcacaaaatagttgtacaaatatcatttctc 37832450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 37899244 - 37899293
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttattaata 52  Q
    ||||||||||||||||| | | ||| |||||||||||||||| |||||||    
T  37899244 acaaaaattgtcacaaaatggatgttcaaatatcatttctctaattaata 37899293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 40693561 - 40693606
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    |||| |||||| ||| |||||||||||||||||||||||| |||||    
T  40693561 aaaagttgtcaaaaaatagttgtacaaatatcatttctctaattaa 40693606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 42276129 - 42276088
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||||| | ||| ||||||||||||||||||||||||||    
T  42276129 aaaaattgttagaaaatagttgtacaaatatcatttctctta 42276088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 2414115 - 2414075
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||||| || |||||||| ||||||||||||||||    
T  2414115 aaaaattgtcacgaagtagttgtataaatatcatttctctt 2414075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 7458223 - 7458259
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcattt 40  Q
    |||||||||||||||| || |||||||||||||||||    
T  7458223 caaaaattgtcacaaaataattgtacaaatatcattt 7458259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 37173004 - 37173044
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttct 42  Q
    ||||||| || ||||||||| ||||||||||||||||||||    
T  37173004 tacaaaagttatcacaaattggttgtacaaatatcatttct 37173044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37385262 - 37385306
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||| ||| |||||||||||||||||||| ||||    
T  37385262 gtacaaaagttgtcaaaaaatagttgtacaaatatcatttatctt 37385306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 38023457 - 38023497
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  38023457 aaaaattatcacaaagtggttgtacaaatatcatttctctt 38023497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 38096472 - 38096512
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | ||||||||||||| |||||||||    
T  38096472 aaaaattgtcacaaaatggttgtacaaatattatttctctt 38096512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 40077292 - 40077252
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||| ||||| ||||||||||||||| |||||||||    
T  40077292 aaaaattgttacaaaatagttgtacaaatataatttctctt 40077252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 41985127 - 41985163
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    ||||||||||||  |||||||||||||||||||||||    
T  41985127 ttgtcacaaattgattgtacaaatatcatttctctta 41985163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 42598239 - 42598279
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||| | ||| |||||||||||||||||||||||    
T  42598239 acaaaaattgttaaaaaatagttgtacaaatatcatttctc 42598279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 43079664 - 43079704
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| ||||||| | ||||||||||||||||||||||    
T  43079664 caaaaattatcacaaagtggttgtacaaatatcatttctct 43079704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 27334899 - 27334851
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  27334899 tacaaaagttgtcacaaaatagttgtacaaatatcatttctctttttaa 27334851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 27395639 - 27395591
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  27395639 tacaaaagttgtcacaaaatagttgtacaaatatcatttctctttttaa 27395591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2056825 - 2056783
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  2056825 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 2056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3339528 - 3339572
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||| | |||||||||||||||||||||||    
T  3339528 gtacaaaagttgtcacaaaatggttgtacaaatatcatttctctt 3339572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 11785393 - 11785353
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  11785393 aaaaattgtcacaaaatggttgtacaaatatcatttctctt 11785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 30796108 - 30796148
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  30796108 aaaaattgtcacaaagtggttgtacaaatatcatttctctt 30796148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 9954586 - 9954547
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  9954586 aaaagttgtcacaaattggttgtacaaatatcatttctct 9954547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 12441571 - 12441536
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||| |||||||||||||||||||||||||    
T  12441571 ttgtcacaaagtagttgtacaaatatcatttctctt 12441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3660382 - 3660424
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| ||||||||||||| |||||||    
T  3660382 gtacaaaagttgtcacaaattggttgtacaaatataatttctc 3660424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25995484 - 25995442
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||||| |||||| | |||||||||||||||||||||    
T  25995484 gtacaaaaattgccacaaaatggttgtacaaatatcatttctc 25995442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26094947 - 26094905
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||||||| |||||| | |||||||||||||||||||||    
T  26094947 gtacaaaaattgccacaaaatggttgtacaaatatcatttctc 26094905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 31883334 - 31883380
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    ||||||| |||||| ||| | ||||||||||||||||||||||||||    
T  31883334 tacaaaagttgtcaaaaagtggttgtacaaatatcatttctcttatt 31883380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 2163739 - 2163702
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  2163739 aaaattgtcacaaattgattgtacaaatatcatttctc 2163702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 2175372 - 2175335
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  2175372 aaaattgtcacaaattgattgtacaaatatcatttctc 2175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 12501512 - 12501475
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttct 42  Q
    ||||||||||||||| || |||||||||||||||||||    
T  12501512 aaaaattgtcacaaaataattgtacaaatatcatttct 12501475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 1434697 - 1434737
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| |||||||||| ||||||||||||||||| ||||    
T  1434697 aaaaattatcacaaattaattgtacaaatatcatttatctt 1434737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 3401123 - 3401087
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcattt 40  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  3401123 caaaaattatcacaaaatagttgtacaaatatcattt 3401087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9594520 - 9594477
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  9594520 gtacaaaagttgtcacaaattggttgtacaaatatcatttctct 9594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12512845 - 12512802
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  12512845 gtacaaaaattgtcacaaattggttgcacaaatatcatttctct 12512802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3263537 - 3263579
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  3263537 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9599757 - 9599799
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  9599757 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 9599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28501634 - 28501592
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  28501634 gtacaaaaattgtcacaaaatggttgtacaaatatcatttctc 28501592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30574406 - 30574448
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  30574406 gtacaaaagttgtcacaaattggttgtacaaatatcatttctc 30574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 15918020 - 15918061
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  15918020 tacaaaagttgtcacaaattaattgtacaaatatcatttctc 15918061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 125130 - 125090
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  125130 aaaagttgtcacaaagtagttgtacaaatatcatttctctt 125090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27271080 - 27271124
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||    
T  27271080 gtacaaaaattgtcataaattggttttacaaatatcatttctctt 27271124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 38500981 - 38500941
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  38500981 aaaaattgtcacaaaatggttgtacaaatatcatttctctt 38500941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4954508 - 4954465
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||| || ||||||||||||| |||||||||||||||||||||    
T  4954508 gtacataagttgtcacaaattaattgtacaaatatcatttctct 4954465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32634750 - 32634699
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctcttattaata 52  Q
    |||||||| |||||||| |||  ||||||||||||||||||||||| |||||    
T  32634750 gtacaaaagttgtcacagattgattgtacaaatatcatttctcttaataata 32634699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 12718413 - 12718451
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  12718413 aaaagttgtcacaaattggttgtacaaatatcatttctc 12718451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 12779639 - 12779677
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  12779639 aaaagttgtcacaaattggttgtacaaatatcatttctc 12779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 14508195 - 14508229
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||||| ||||||||||||||||||||||||    
T  14508195 ttgtcacaaaatagttgtacaaatatcatttctct 14508229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 25345381 - 25345339
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||||| ||| |||||| |||||||||||||||||||||    
T  25345381 tacaaaaattatcataaattaattgtacaaatatcatttctct 25345339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 11148551 - 11148506
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttatt 48  Q
    |||||| |||||| |||||  |||||||||||||||||||||||||    
T  11148551 acaaaagttgtcaaaaattgattgtacaaatatcatttctcttatt 11148506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14914411 - 14914370
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||| |||||||||| | |||||||||||||||||||||||    
T  14914411 caaaagttgtcacaaaatggttgtacaaatatcatttctctt 14914370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 28811468 - 28811427
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||| |||||||||| | |||||||||||||||||||||||    
T  28811468 caaaagttgtcacaaagtggttgtacaaatatcatttctctt 28811427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 30838397 - 30838446
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctcttattaataa 53  Q
    ||||| |||||| ||| ||| |||||||||||||||||||||| ||||||    
T  30838397 caaaagttgtcaaaaagtagatgtacaaatatcatttctcttaataataa 30838446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 32872929 - 32872982
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctcttattaataaact 56  Q
    |||||| |||||| ||| ||||||| ||||||||||||||||||  ||||||||    
T  32872929 acaaaagttgtcaaaaaatagttgttcaaatatcatttctcttaggaataaact 32872982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 2050966 - 2050926
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    |||||||||| ||||| | ||||||||||||||||||||||    
T  2050966 caaaaattgttacaaaatggttgtacaaatatcatttctct 2050926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 3109618 - 3109658
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||| ||||||||||||  ||||||||||||||||||||    
T  3109618 acaaaagttgtcacaaattgattgtacaaatatcatttctc 3109658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 4434520 - 4434480
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||| ||| | |||||||||||||||||||||||    
T  4434520 aaaaattgtcaaaaaatggttgtacaaatatcatttctctt 4434480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 4719690 - 4719650
Alignment:
Q  3 acaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||| |||||| ||||| |||||||||||||||||||||    
T  4719690 acaaaagttgtcaaaaattggttgtacaaatatcatttctc 4719650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 5996705 - 5996665
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||| | ||| |||||||||||||||||||||||||    
T  5996705 aaaaattgttaaaaaatagttgtacaaatatcatttctctt 5996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 8959199 - 8959159
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctct 44  Q
    ||||| |||||||| | ||||||||||||||||||||||||    
T  8959199 caaaagttgtcacataatagttgtacaaatatcatttctct 8959159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 23991172 - 23991208
Alignment:
Q  10 ttgtcacaaattagttgtacaaatatcatttctctta 46  Q
    |||||||||| | ||||||||||||||||||||||||    
T  23991172 ttgtcacaaagtggttgtacaaatatcatttctctta 23991208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 29803263 - 29803223
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||| ||| |||||||||||||||||||||||||    
T  29803263 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 29803223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33823722 - 33823766
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||| || ||||||||| || |||||||||||||||||||||||    
T  33823722 gtacagaagttgtcacaagttggttgtacaaatatcatttctctt 33823766  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 34428198 - 34428158
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||| ||| |||||||||||||||||||||||||    
T  34428198 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 34428158  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 36572729 - 36572689
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| ||||| |||||||||||||||||||    
T  36572729 aaaagttgtcacaaaatagttatacaaatatcatttctctt 36572689  T

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Target: scaffold0662 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 1116 - 1071
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctcttattaa 50  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||    
T  1116 aaaagttgtcacaaaatagttgtacaaatatcatttctctaattaa 1071  T

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Target: scaffold0514 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1525 - 1569
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||    
T  1525 gtacaaaagttgtcacaaattggttatacaaatatcatttctctt 1569  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 36040 - 36000
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  36040 aaaaattatcacaaagtagttgtacaaatatcatttctctt 36000  T

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Target: scaffold0174 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 34827 - 34862
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcattt 40  Q
    |||||||||||||||||| |||||||||||||||||    
T  34827 aaaaattgtcacaaattaattgtacaaatatcattt 34862  T

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Target: scaffold0592 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 951 - 901
Alignment:
Q  2 tacaaaaattgtcacaaattagttgtacaaatatcatttctcttattaata 52  Q
    |||||||||| |  |||||| ||||||||||||||||||||||| ||||||    
T  951 tacaaaaattatatcaaattggttgtacaaatatcatttctctttttaata 901  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 19724 - 19762
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  19724 aaaagttgtcacaaaatagttgtacaaatatcatttctc 19762  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 9489 - 9447
Alignment:
Q  7 aaattgtcacaaattagttgtacaaatatcatttctcttatta 49  Q
    ||||||||| ||| | |||||||||||||||||||||||||||    
T  9489 aaattgtcataaagtggttgtacaaatatcatttctcttatta 9447  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18637 - 18595
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| || ||||||||| |||||||||||||||||||||    
T  18637 gtacaaaagttatcacaaattggttgtacaaatatcatttctc 18595  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 219697 - 219737
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  219697 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 219737  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 147285 - 147327
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||    
T  147285 gtacaaaagttgtcacaaattaattgtacagatatcatttctc 147327  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 18670 - 18707
Alignment:
Q  6 aaaattgtcacaaattagttgtacaaatatcatttctc 43  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  18670 aaaattgtcacaaattgattgtacaaatatcatttctc 18707  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 25742 - 25701
Alignment:
Q  4 caaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||||||| ||| | |||||||||||||||||||||||    
T  25742 caaaaattgtcataaagtggttgtacaaatatcatttctctt 25701  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 38917 - 38877
Alignment:
Q  5 aaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||||||||| | ||||||||||||| |||||||||    
T  38917 aaaaattgtcacaaagtggttgtacaaatattatttctctt 38877  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 204474 - 204518
Alignment:
Q  1 gtacaaaaattgtcacaaattagttgtacaaatatcatttctctt 45  Q
    |||||||| |||||| ||| ||| |||||||||||||||||||||    
T  204474 gtacaaaagttgtcagaaaatagatgtacaaatatcatttctctt 204518  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 45
Target Start/End: Complemental strand, 88838 - 88806
Alignment:
Q  13 tcacaaattagttgtacaaatatcatttctctt 45  Q
    ||||||||| |||||||||||||||||||||||    
T  88838 tcacaaattggttgtacaaatatcatttctctt 88806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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