View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8353_high_1 (Length: 594)

Name: NF8353_high_1
Description: NF8353
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8353_high_1
NF8353_high_1
[»] chr5 (36 HSPs)
chr5 (4-577)||(11250650-11251223)
chr5 (1-108)||(978082-978189)
chr5 (1-108)||(40156203-40156310)
chr5 (1-103)||(3472427-3472529)
chr5 (1-106)||(33587619-33587724)
chr5 (1-109)||(14634307-14634415)
chr5 (1-108)||(8086180-8086287)
chr5 (1-108)||(9502777-9502884)
chr5 (1-103)||(34111972-34112074)
chr5 (1-98)||(33387235-33387332)
chr5 (1-102)||(11785875-11785977)
chr5 (1-103)||(30355024-30355126)
chr5 (1-108)||(18094231-18094338)
chr5 (1-108)||(24992288-24992395)
chr5 (315-375)||(11248882-11248942)
chr5 (3-82)||(7224196-7224275)
chr5 (3-82)||(39776661-39776740)
chr5 (1-107)||(20692541-20692645)
chr5 (5-108)||(38916404-38916507)
chr5 (1-75)||(32017251-32017325)
chr5 (1-82)||(12456790-12456871)
chr5 (1-103)||(24916396-24916500)
chr5 (1-102)||(27109700-27109800)
chr5 (1-51)||(11761128-11761178)
chr5 (1-40)||(9050726-9050765)
chr5 (1-59)||(27579580-27579638)
chr5 (3-108)||(12007784-12007889)
chr5 (1-61)||(12447568-12447626)
chr5 (1-41)||(32400399-32400439)
chr5 (3-82)||(6996012-6996090)
chr5 (1-70)||(3422360-3422432)
chr5 (268-310)||(11248967-11249009)
chr5 (54-108)||(12448275-12448329)
chr5 (1-47)||(18998753-18998799)
chr5 (37-106)||(18598551-18598620)
chr5 (11-56)||(37495667-37495712)
[»] chr8 (38 HSPs)
chr8 (1-116)||(14237277-14237392)
chr8 (1-108)||(32998455-32998562)
chr8 (1-103)||(18044435-18044537)
chr8 (1-108)||(42587398-42587505)
chr8 (1-118)||(38957165-38957282)
chr8 (1-102)||(41263821-41263922)
chr8 (1-108)||(616788-616895)
chr8 (1-108)||(623181-623288)
chr8 (1-114)||(3100645-3100758)
chr8 (1-82)||(5878347-5878428)
chr8 (1-102)||(13216871-13216972)
chr8 (1-108)||(132022-132129)
chr8 (1-108)||(8394351-8394458)
chr8 (1-103)||(40494394-40494496)
chr8 (3-108)||(4270244-4270349)
chr8 (1-106)||(11637789-11637894)
chr8 (1-103)||(2766198-2766300)
chr8 (1-103)||(35403526-35403628)
chr8 (10-91)||(22489433-22489514)
chr8 (11-103)||(24524110-24524202)
chr8 (1-108)||(36642008-36642116)
chr8 (315-375)||(1108685-1108745)
chr8 (270-364)||(1106998-1107096)
chr8 (7-108)||(36167081-36167182)
chr8 (1-82)||(3370406-3370487)
chr8 (1-82)||(5173282-5173363)
chr8 (3-103)||(6414117-6414217)
chr8 (463-509)||(1107126-1107172)
chr8 (1-77)||(33700223-33700299)
chr8 (53-103)||(13217223-13217273)
chr8 (1-91)||(18090351-18090440)
chr8 (1-108)||(38497088-38497184)
chr8 (541-577)||(1107169-1107205)
chr8 (189-276)||(1108522-1108607)
chr8 (16-51)||(18020928-18020963)
chr8 (1-43)||(40716673-40716715)
chr8 (1-50)||(18035163-18035212)
chr8 (1-57)||(8058974-8059030)
[»] chr6 (36 HSPs)
chr6 (1-106)||(17257801-17257906)
chr6 (1-108)||(18668838-18668945)
chr6 (1-108)||(4147936-4148043)
chr6 (1-103)||(22054782-22054884)
chr6 (1-108)||(19088108-19088215)
chr6 (1-104)||(20226448-20226551)
chr6 (1-104)||(22120432-22120535)
chr6 (1-108)||(24624091-24624198)
chr6 (1-108)||(32414829-32414936)
chr6 (1-108)||(32671821-32671928)
chr6 (1-102)||(17213934-17214035)
chr6 (1-108)||(6563231-6563338)
chr6 (1-88)||(24955546-24955633)
chr6 (1-99)||(3989414-3989511)
chr6 (1-103)||(15383080-15383182)
chr6 (1-82)||(1040855-1040936)
chr6 (1-97)||(20437163-20437260)
chr6 (2-113)||(28477753-28477864)
chr6 (1-103)||(31569176-31569278)
chr6 (2-106)||(29790213-29790317)
chr6 (2-113)||(29693883-29693994)
chr6 (20-117)||(25475977-25476074)
chr6 (3-106)||(15337495-15337598)
chr6 (1-102)||(12225986-12226087)
chr6 (1-82)||(19240742-19240823)
chr6 (11-102)||(21540789-21540880)
chr6 (3-76)||(10298725-10298798)
chr6 (11-103)||(10520478-10520570)
chr6 (1-103)||(4440860-4440962)
chr6 (1-103)||(31869718-31869820)
chr6 (1-55)||(5495307-5495361)
chr6 (1-49)||(8101664-8101712)
chr6 (1-57)||(23158059-23158115)
chr6 (1-51)||(1260492-1260542)
chr6 (1-51)||(3623860-3623909)
chr6 (3-76)||(14214065-14214138)
[»] chr7 (51 HSPs)
chr7 (1-109)||(7438907-7439015)
chr7 (1-108)||(16778510-16778617)
chr7 (1-117)||(47156023-47156139)
chr7 (1-108)||(20885108-20885215)
chr7 (1-108)||(28061665-28061772)
chr7 (1-108)||(32431508-32431615)
chr7 (1-108)||(36623313-36623420)
chr7 (1-103)||(7457872-7457973)
chr7 (1-103)||(40256067-40256169)
chr7 (1-103)||(42890493-42890595)
chr7 (1-110)||(36585112-36585221)
chr7 (1-108)||(38851997-38852104)
chr7 (1-108)||(40090068-40090175)
chr7 (1-108)||(41897993-41898100)
chr7 (1-103)||(6174846-6174948)
chr7 (1-103)||(39130076-39130178)
chr7 (1-103)||(46479839-46479941)
chr7 (1-82)||(44732043-44732124)
chr7 (1-108)||(48602441-48602548)
chr7 (1-104)||(11502730-11502833)
chr7 (5-103)||(25566702-25566799)
chr7 (13-102)||(46322127-46322216)
chr7 (1-108)||(6766700-6766807)
chr7 (8-103)||(8683828-8683923)
chr7 (1-108)||(42877391-42877498)
chr7 (1-100)||(3851090-3851186)
chr7 (1-82)||(30342105-30342186)
chr7 (1-82)||(35117157-35117237)
chr7 (1-102)||(41088598-41088699)
chr7 (1-107)||(5788527-5788633)
chr7 (1-108)||(2198607-2198714)
chr7 (1-103)||(4131653-4131755)
chr7 (1-63)||(46103520-46103582)
chr7 (3-76)||(26161633-26161706)
chr7 (1-103)||(35570199-35570306)
chr7 (1-103)||(5529021-5529123)
chr7 (1-103)||(7169136-7169238)
chr7 (1-103)||(36341630-36341732)
chr7 (1-103)||(41134638-41134735)
chr7 (1-103)||(27045558-27045660)
chr7 (1-41)||(21379816-21379856)
chr7 (1-65)||(34750550-34750614)
chr7 (15-103)||(42662197-42662284)
chr7 (15-110)||(16870644-16870739)
chr7 (5-40)||(23707577-23707612)
chr7 (1-47)||(37467457-37467503)
chr7 (15-57)||(38767223-38767265)
chr7 (10-51)||(3785582-3785623)
chr7 (33-82)||(45331943-45331992)
chr7 (1-82)||(49101963-49102044)
chr7 (15-76)||(49110634-49110695)
[»] chr3 (37 HSPs)
chr3 (1-116)||(33803518-33803634)
chr3 (1-103)||(21797566-21797668)
chr3 (1-108)||(13499485-13499592)
chr3 (1-108)||(42490346-42490453)
chr3 (1-108)||(27010624-27010731)
chr3 (1-108)||(34912292-34912399)
chr3 (1-108)||(39866291-39866398)
chr3 (1-108)||(42761633-42761740)
chr3 (1-103)||(6910344-6910446)
chr3 (1-103)||(27334881-27334983)
chr3 (1-115)||(54507639-54507753)
chr3 (1-82)||(38137855-38137936)
chr3 (1-108)||(20765201-20765308)
chr3 (1-108)||(33415804-33415911)
chr3 (20-108)||(19823905-19823993)
chr3 (1-72)||(30213845-30213916)
chr3 (1-82)||(36227576-36227657)
chr3 (1-108)||(21005298-21005405)
chr3 (1-103)||(43467892-43467994)
chr3 (1-103)||(43181505-43181608)
chr3 (1-106)||(41252913-41253018)
chr3 (1-106)||(15332956-15333061)
chr3 (26-103)||(45613583-45613660)
chr3 (1-81)||(44561816-44561896)
chr3 (3-82)||(3430426-3430505)
chr3 (1-103)||(25527416-25527516)
chr3 (8-74)||(27813445-27813511)
chr3 (46-103)||(32220873-32220930)
chr3 (1-82)||(52167240-52167321)
chr3 (2-57)||(3017847-3017902)
chr3 (16-57)||(14412260-14412301)
chr3 (1-106)||(15568085-15568189)
chr3 (1-113)||(22786630-22786740)
chr3 (1-57)||(16434805-16434861)
chr3 (1-49)||(17643795-17643843)
chr3 (1-57)||(33128069-33128125)
chr3 (7-51)||(41751566-41751610)
[»] chr2 (34 HSPs)
chr2 (1-108)||(39358151-39358258)
chr2 (1-108)||(2183107-2183214)
chr2 (1-108)||(5405001-5405108)
chr2 (1-108)||(8042172-8042279)
chr2 (1-108)||(19141216-19141323)
chr2 (1-103)||(6223076-6223178)
chr2 (1-103)||(7608059-7608161)
chr2 (1-103)||(44365167-44365269)
chr2 (1-99)||(11841743-11841841)
chr2 (1-110)||(19262683-19262792)
chr2 (1-102)||(36072185-36072286)
chr2 (1-103)||(7799857-7799959)
chr2 (1-68)||(13125295-13125362)
chr2 (13-102)||(33607387-33607476)
chr2 (1-102)||(43444690-43444791)
chr2 (3-103)||(24251970-24252070)
chr2 (1-63)||(9172296-9172358)
chr2 (1-103)||(11931701-11931803)
chr2 (1-103)||(32774601-32774703)
chr2 (1-74)||(31610803-31610876)
chr2 (1-78)||(44644905-44644982)
chr2 (6-102)||(9006939-9007035)
chr2 (1-81)||(22839077-22839157)
chr2 (1-82)||(36177727-36177809)
chr2 (1-97)||(36719474-36719565)
chr2 (1-50)||(38839136-38839185)
chr2 (1-102)||(42133763-42133864)
chr2 (1-57)||(38292008-38292064)
chr2 (31-82)||(13598472-13598523)
chr2 (2-59)||(16865108-16865165)
chr2 (1-70)||(31904030-31904099)
chr2 (1-57)||(2831762-2831818)
chr2 (3-55)||(3837271-3837323)
chr2 (1-57)||(13117474-13117530)
[»] chr1 (36 HSPs)
chr1 (1-108)||(6402560-6402667)
chr1 (1-108)||(16120590-16120697)
chr1 (1-103)||(30003543-30003645)
chr1 (1-102)||(11641217-11641318)
chr1 (1-102)||(36757636-36757737)
chr1 (1-102)||(42788692-42788793)
chr1 (1-108)||(6766377-6766484)
chr1 (1-108)||(30701723-30701830)
chr1 (1-108)||(40771922-40772029)
chr1 (1-103)||(9342795-9342897)
chr1 (1-103)||(36399108-36399210)
chr1 (1-108)||(27292645-27292752)
chr1 (1-108)||(40977638-40977745)
chr1 (1-108)||(24321264-24321373)
chr1 (1-98)||(26910091-26910188)
chr1 (1-108)||(17305959-17306066)
chr1 (1-108)||(52024031-52024138)
chr1 (1-97)||(48375018-48375114)
chr1 (1-103)||(42735315-42735420)
chr1 (1-109)||(15912486-15912594)
chr1 (1-103)||(28030831-28030933)
chr1 (1-82)||(4302149-4302230)
chr1 (1-82)||(44647863-44647944)
chr1 (1-68)||(42367446-42367513)
chr1 (1-76)||(30385295-30385370)
chr1 (2-104)||(3485358-3485460)
chr1 (1-103)||(15382576-15382678)
chr1 (1-102)||(40800537-40800638)
chr1 (1-102)||(38153427-38153528)
chr1 (1-81)||(34634939-34635019)
chr1 (6-82)||(44644510-44644586)
chr1 (1-45)||(22575737-22575781)
chr1 (1-72)||(27984597-27984667)
chr1 (17-75)||(16689862-16689920)
chr1 (35-103)||(25170889-25170955)
chr1 (1-50)||(31444986-31445035)
[»] chr4 (53 HSPs)
chr4 (1-103)||(25296730-25296832)
chr4 (1-103)||(44232227-44232329)
chr4 (1-108)||(2760877-2760984)
chr4 (1-108)||(26169991-26170098)
chr4 (1-108)||(38416800-38416907)
chr4 (1-108)||(47386436-47386543)
chr4 (1-106)||(12240328-12240433)
chr4 (1-108)||(17610285-17610392)
chr4 (1-108)||(35686378-35686485)
chr4 (1-108)||(38716892-38716998)
chr4 (1-108)||(29830348-29830455)
chr4 (1-108)||(35381044-35381151)
chr4 (1-108)||(54330840-54330947)
chr4 (1-108)||(55209724-55209831)
chr4 (1-103)||(43967733-43967835)
chr4 (6-116)||(55800831-55800941)
chr4 (1-108)||(26125713-26125820)
chr4 (1-108)||(31010219-31010326)
chr4 (1-103)||(12625261-12625363)
chr4 (1-108)||(19433508-19433619)
chr4 (1-103)||(25918213-25918315)
chr4 (1-103)||(50620832-50620934)
chr4 (6-108)||(55191829-55191931)
chr4 (3-108)||(3036985-3037090)
chr4 (1-98)||(17446783-17446880)
chr4 (1-82)||(45291863-45291944)
chr4 (1-103)||(54610872-54610975)
chr4 (9-103)||(50205753-50205847)
chr4 (3-82)||(19595736-19595815)
chr4 (1-103)||(36523118-36523220)
chr4 (1-102)||(2571032-2571133)
chr4 (1-82)||(9029599-9029680)
chr4 (1-76)||(4467669-4467744)
chr4 (1-64)||(7614664-7614727)
chr4 (1-82)||(38721368-38721449)
chr4 (5-82)||(27407773-27407850)
chr4 (30-103)||(5428588-5428661)
chr4 (1-57)||(14144607-14144663)
chr4 (1-45)||(50181128-50181172)
chr4 (15-82)||(32871523-32871590)
chr4 (12-103)||(34652208-34652299)
chr4 (7-82)||(56297858-56297933)
chr4 (5-75)||(19903804-19903874)
chr4 (7-113)||(25101720-25101826)
chr4 (2-67)||(29051730-29051793)
chr4 (3-57)||(53304481-53304535)
chr4 (15-102)||(23360189-23360273)
chr4 (3-103)||(39307706-39307806)
chr4 (1-108)||(10550429-10550538)
chr4 (29-106)||(20875425-20875502)
chr4 (1-98)||(34316536-34316632)
chr4 (13-77)||(10181149-10181213)
chr4 (1-57)||(55631827-55631883)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-108)||(100797-100904)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-108)||(161987-162094)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-102)||(70972-71072)
[»] scaffold0295 (2 HSPs)
scaffold0295 (1-108)||(13867-13974)
scaffold0295 (53-108)||(9377-9432)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-103)||(67919-68021)
[»] scaffold0595 (1 HSPs)
scaffold0595 (1-71)||(3990-4060)
[»] scaffold0099 (1 HSPs)
scaffold0099 (1-82)||(28802-28884)
[»] scaffold0262 (1 HSPs)
scaffold0262 (1-82)||(22811-22892)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-82)||(8983-9064)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-82)||(138180-138261)
[»] scaffold0608 (1 HSPs)
scaffold0608 (1-45)||(1588-1632)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-103)||(217025-217128)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-77)||(36467-36543)


Alignment Details
Target: chr5 (Bit Score: 554; Significance: 0; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 4 - 577
Target Start/End: Complemental strand, 11251223 - 11250650
Alignment:
Q  4 tacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11251223 tacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaacc 11251124  T
Q  104 agaggaaataataacaatatttgatgtagatatttgatttgtcggctcaaaatcttatgctcatagttagatgaaaacaaaaattatgacattgtgcttg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11251123 agaggaaataataacaatatttgatgtagatatttgatttgtcggctcaaaatcttatgctcatagttagatgaaaacaaaaattatgacattgtgcttg 11251024  T
Q  204 tttttccttattttgcatccattctatccctccaaatactcctttccaactgaaaagatactacttctactcttttggtaaattcctttgcaatctaaac 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11251023 tttttccttattttgcatccattctatccctccaaatactcctttccaaccgaaaagatactacctctactcttttggtaaattcctttgcaatctaaac 11250924  T
Q  304 attcatagaaccaatagcagtgaaatatatcaaatcatttctattgcttattgctaggattatctcttctaagttctaaccatttctttttcatagttga 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250923 attcatagaaccaatagcagtgaaatatatcaaatcatttctattgcttattgctaggattatctcttctaagttctaaccatttctttttcatagttga 11250824  T
Q  404 gttaccttaacttcaacttttgcttctctgcctttcccgctcacgacatattttaattccaacattaaaatatcaacaatgaacaacatacacaacaact 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250823 gttaccttaacttcaacttttgcttctctgcctttcccgctcacgacatattttaattccaacattaaaatatcaacaatgaacaacatacacaacaact 11250724  T
Q  504 aatgcaatttgagatgatcagaaaataaagaaattgttgcatactgtttcaaatcaaatacaaaaccagaaatc 577  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250723 aatgcaatttgagatgatcagaaaataaagaaattgttgcatactgtttcaaatcaaatacaaaaccagaaatc 11250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 978189 - 978082
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  978189 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 978090  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  978089 aacggagg 978082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 40156310 - 40156203
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||||||||| || || ||||||||    
T  40156310 tcttacatgctaatatttgtatttatacattaattaaaaattatggtaaaagtaagtcaagtgaatagtgcacattgcaaaagttggatatgtattttga 40156211  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  40156210 aacggagg 40156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 3472427 - 3472529
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||  |||| ||||||||    
T  3472427 tcttacatgctaatatttgtatttattcattagttaaaaaatatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttga 3472526  T
Q  101 aac 103  Q
    |||    
T  3472527 aac 3472529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33587619 - 33587724
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||| |||||| |||||||||||||| || ||||| ||||||||    
T  33587619 tcttacatgttaatatttgtatttatagattagttaaaaaatatggtcaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttga 33587718  T
Q  101 aacaga 106  Q
    ||||||    
T  33587719 aacaga 33587724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 14634307 - 14634415
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||| |||||| |||||||||||| ||||||||||||||||| || ||||| ||||||||    
T  14634307 tcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgactagtgcacattgcaaaaattggacatgtattttga 14634406  T
Q  101 aacagagga 109  Q
    ||| |||||    
T  14634407 aacggagga 14634415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8086180 - 8086287
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  8086180 tcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 8086279  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  8086280 aacggagg 8086287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9502777 - 9502884
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||| |||| |||||| |    
T  9502777 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattaaacatgtattttaa 9502876  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  9502877 aacggagg 9502884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 34112074 - 34111972
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| || |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  34112074 tcttacatgataatatttgtatttatagattagtaaaaaaatatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaactagacatgtattttga 34111975  T
Q  101 aac 103  Q
    |||    
T  34111974 aac 34111972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 33387332 - 33387235
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 98  Q
    |||||||||||||||||||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| ||||||    
T  33387332 tcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtatttt 33387235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11785875 - 11785977
Alignment:
Q  1 tcttacatgctaatattt-gtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    ||||||||| |||||||| |||||| ||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||| ||| |||| |||||||    
T  11785875 tcttacatggtaatattttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttg 11785974  T
Q  100 aaa 102  Q
    |||    
T  11785975 aaa 11785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30355024 - 30355126
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||  |||||| ||| ||| |||||||||||||||| ||||||||| || ||||| ||||||||    
T  30355024 tcttacatgctaatatttgtatttatatattagttaaaatgtatggttaaagtaaatcaagtgaatagtgcatattgcaaaaattggacatgtattttga 30355123  T
Q  101 aac 103  Q
    |||    
T  30355124 aac 30355126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18094231 - 18094338
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||  | ||| ||||| ||||||||| |||||||||||||| ||  |||| ||||||||    
T  18094231 tcttacatgctaatatttgtatttatacattagttaaaaagtataattaaagtaagttaagtgaataatgcacattgcaaaaattgaacatgtattttga 18094330  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  18094331 aacggagg 18094338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24992288 - 24992395
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||  | ||||||||||||||||| |||| |  ||||| ||||||||    
T  24992288 tcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcacattgtaaaactatgacatgtattttga 24992387  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  24992388 aacggagg 24992395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 11248942 - 11248882
Alignment:
Q  315 caatagcagtgaaatatatcaaatcatttctattgcttattgctaggattatctcttctaa 375  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11248942 caatagaagtgaaatatatcaaataatttctattgcttattgctaggattatctcttctaa 11248882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 7224275 - 7224196
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||| || |||||||| ||| |||||||||| |||||||| | |||||| ||||||||||||    
T  7224275 ttacatgctaatatttgtatttataaattagttagaaagtatggtcaaagtaagtcaattaaatagtacacattgcaaaa 7224196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 39776740 - 39776661
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||| ||  ||||||||||| || ||||||||||||| | |||||||||| |||||||||||    
T  39776740 ttacatgctaatatttgtatttatatgttagttaaaaagtacggtcaaaataagttatgtgaatagtgtacattgcaaaa 39776661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20692541 - 20692645
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| ||  || |||||||| ||||||||||||| |||||||| ||| |||||||||||||| |  ||| | |||||| |    
T  20692541 tcttacatgttaatatttgtatttata--ttggttaaaaagtatggtcaaaatacgtcaagtggataatgcacattgcaaaaatgtgacgtgtattttaa 20692638  T
Q  101 aacagag 107  Q
    |||||||    
T  20692639 aacagag 20692645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 38916404 - 38916507
Alignment:
Q  5 acatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaaca 104  Q
    ||||||||| |||||||||| ||  ||||||||||| ||||||||||  |||||| |||||||||||| | ||||||| |  ||||| |||||||||||     
T  38916404 acatgctaacatttgtatttatatgttagttaaaaagtatggtcaaagcaagtcatgtgaatagtgcatactgcaaaaatgcgacatgtattttgaaacg 38916503  T
Q  105 gagg 108  Q
    ||||    
T  38916504 gagg 38916507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32017325 - 32017251
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacat 75  Q
    ||||||||||||| |||||||||| || ||||||||||||||||| ||||| ||||| | ||||||| |||||||    
T  32017325 tcttacatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgtgaatattgcacat 32017251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12456790 - 12456871
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||| | ||| ||||| | || |||||||||||||| ||||    
T  12456790 tcttacatactaacatttgtatttgtatattagttaaaaaatatgattaaagtaagttatgtaaatagtgcacattgtaaaa 12456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 24916396 - 24916500
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagtt--aaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 98  Q
    ||||| |||||||||||||||||| || |||||||  |||||||||||||||| ||||  | ||||||||| ||||||| |||| |  ||||| ||||||    
T  24916396 tcttatatgctaatatttgtatttataaattagttaaaaaaaatatggtcaaagtaagctatgtgaatagtacacattgtaaaattgtgacatgtatttt 24916495  T
Q  99 gaaac 103  Q
    |||||    
T  24916496 gaaac 24916500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 27109800 - 27109700
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||  ||||| |||||||| |||||| | || |||| |||| ||| | |||||||||||    
T  27109800 tcttacatgctaatatttgtatttttacattaattaaaaagtat-atcaaagtaagtcaaatgaataatacatattgtaaaaattaaatatatattttga 27109702  T
Q  101 aa 102  Q
    ||    
T  27109701 aa 27109700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11761178 - 11761128
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 51  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  11761178 tcttacatgttaatatttgtatttatatattagttaaaaaatatggtcaaa 11761128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9050726 - 9050765
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaa 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  9050726 tcttacatgctaatatttgtatttatacattagttaaaaa 9050765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27579580 - 27579638
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtca 59  Q
    ||||||||||||| |||||||||| || |||||||||||||||| || ||| |||||||    
T  27579580 tcttacatgctaacatttgtatttatatattagttaaaaaatatagttaaagtaagtca 27579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 12007784 - 12007889
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    ||||||||||  |||||||||| || |||| ||||||| || ||||||| ||||||| || ||||||||||| |  |||| |  ||||| ||||||||||    
T  12007784 ttacatgctagcatttgtatttatatattaattaaaaagtagggtcaaattaagtcatgtaaatagtgcacaatataaaaatgcgacatgtattttgaaa 12007883  T
Q  103 cagagg 108  Q
    | ||||    
T  12007884 cggagg 12007889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12447568 - 12447626
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaag 61  Q
    ||||||||||||||||  ||||||  |||||||||||||| |||||||||| |||||||||    
T  12447568 tcttacatgctaatat--gtatttaaacattagttaaaaagtatggtcaaagtaagtcaag 12447626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32400439 - 32400399
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaa 41  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  32400439 tcttacatgctaatatttgtatttatatattagttaaaaaa 32400399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 6996090 - 6996012
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||| ||| |||| ||||| || |||||||||||||||| ||  |||||||| | |||||||||||||||| |||||    
T  6996090 ttacatggtaacatttatatttatatattagttaaaaaatatagt-taaataagttatgtgaatagtgcacattacaaaa 6996012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3422360 - 3422432
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagtt---aaaaaatatggtcaaaataagtcaagtgaatagtg 70  Q
    ||||||||||||| |||||||||| || |||||||   ||||||||| |||||| ||||| | ||||||||||    
T  3422360 tcttacatgctaacatttgtatttatatattagttaaaaaaaaatatagtcaaagtaagttatgtgaatagtg 3422432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 310
Target Start/End: Complemental strand, 11249009 - 11248967
Alignment:
Q  268 ttctactcttttggtaaattcctttgcaatctaaacattcata 310  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||    
T  11249009 ttctactcttttggtacatttctttgcaatctaagcattcata 11248967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 12448275 - 12448329
Alignment:
Q  54 aagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagagg 108  Q
    ||||||||||||||||||  ||| ||||| |||||||| ||||||||||| ||||    
T  12448275 aagtcaagtgaatagtgcgtattacaaaaattagacatgtattttgaaacggagg 12448329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18998799 - 18998753
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggt 47  Q
    |||||||| |||| |||||||||| || |||||||||||||||||||    
T  18998799 tcttacatactaacatttgtatttatatattagttaaaaaatatggt 18998753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 18598620 - 18598551
Alignment:
Q  37 aaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacaga 106  Q
    |||| |||||||||| ||| ||| || |||| |||||||||||||| |  ||||| ||||||||||||||    
T  18598620 aaaagtatggtcaaagtaattcatgtcaataatgcacattgcaaaaatgcgacatgtattttgaaacaga 18598551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 37495712 - 37495667
Alignment:
Q  11 taatatttgtatttgtacattagttaaaaaatatggtcaaaataag 56  Q
    |||||||||||||| || ||||||||||||||||| ||||| ||||    
T  37495712 taatatttgtatttatatattagttaaaaaatatgatcaaagtaag 37495667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 5e-42; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14237392 - 14237277
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  14237392 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 14237293  T
Q  101 aacagaggaaataata 116  Q
    ||| |||||| |||||    
T  14237292 aacggaggaagtaata 14237277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32998562 - 32998455
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  32998562 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 32998463  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  32998462 aacggagg 32998455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18044537 - 18044435
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  18044537 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 18044438  T
Q  101 aac 103  Q
    |||    
T  18044437 aac 18044435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42587398 - 42587505
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  42587398 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 42587497  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  42587498 aacggagg 42587505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38957282 - 38957165
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||| ||||||||||||||||||| || ||||||||||||||    
T  38957282 tcttacatgctaatatttgtatttatacgttagttaaaaaatatggtcaaagtaaatcaagttaatagtgcacattgcaaaaattggacatatattttga 38957183  T
Q  101 aacagaggaaataataac 118  Q
    ||| || |||||| ||||    
T  38957182 aacggatgaaatattaac 38957165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41263922 - 41263821
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || || ||||||||    
T  41263922 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggatatgtattttga 41263823  T
Q  101 aa 102  Q
    ||    
T  41263822 aa 41263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 616895 - 616788
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  616895 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 616796  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  616795 aacggagg 616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 623288 - 623181
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  623288 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 623189  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  623188 aacggagg 623181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3100645 - 3100758
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||| ||||||||||||||||||| || ||||| ||||||||    
T  3100645 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtaaatagtgcacattgcaaaaattggacatgtattttga 3100744  T
Q  101 aacagaggaaataa 114  Q
    ||| |||| |||||    
T  3100745 aacggagggaataa 3100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5878428 - 5878347
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5878428 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaa 5878347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13216871 - 13216972
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||| ||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  13216871 tctttcatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttga 13216970  T
Q  101 aa 102  Q
    ||    
T  13216971 aa 13216972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 132129 - 132022
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||  | ||||| ||||||||    
T  132129 tcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaatagtgcacgttgcaaaaagtggacatgtattttga 132030  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  132029 aacggagg 132022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8394458 - 8394351
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||| || |||||||||||| || ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  8394458 tcttaaatactaatatttgtacttatacattagttaaaaaatttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttga 8394359  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  8394358 aacggagg 8394351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40494496 - 40494394
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  40494496 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtattttga 40494397  T
Q  101 aac 103  Q
    |||    
T  40494396 aac 40494394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 4270244 - 4270349
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||| |||||| |||    
T  4270244 ttacatgttaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttaaaa 4270343  T
Q  103 cagagg 108  Q
    | ||||    
T  4270344 cggagg 4270349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11637894 - 11637789
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||||| |||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||||| |||| || |||||| |||||||    
T  11637894 tcttacatgctaatacttgtatttatacactagttaaaaagtacggtcaaaataagtcaagtgaatagtgcacattgtaaaaattggacatacattttga 11637795  T
Q  101 aacaga 106  Q
    ||||||    
T  11637794 aacaga 11637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2766198 - 2766300
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| || || || ||||||||    
T  2766198 tcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggatatgtattttga 2766297  T
Q  101 aac 103  Q
    |||    
T  2766298 aac 2766300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35403628 - 35403526
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||| ||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| || ||||| ||||||||    
T  35403628 tcttacatgttaatatctgtatttatacattagttaaaaagtatggtcaaagtatgtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 35403529  T
Q  101 aac 103  Q
    |||    
T  35403528 aac 35403526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 22489433 - 22489514
Alignment:
Q  10 ctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacat 91  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  22489433 ctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacat 22489514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 24524202 - 24524110
Alignment:
Q  11 taatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||  |||| |||||||||||    
T  24524202 taatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaatttgaacatgtattttgaaac 24524110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36642008 - 36642116
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaata-tggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    |||||||||||||||||||||||| || || ||||||||| || |||||||| |||||||||||||||||||||||||||||| ||  |||| |||||||    
T  36642008 tcttacatgctaatatttgtatttatatataagttaaaaagtaatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttg 36642107  T
Q  100 aaacagagg 108  Q
    |||| ||||    
T  36642108 aaacggagg 36642116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 315 - 375
Target Start/End: Original strand, 1108685 - 1108745
Alignment:
Q  315 caatagcagtgaaatatatcaaatcatttctattgcttattgctaggattatctcttctaa 375  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1108685 caatagaagtgaaatatatcaaatcatttctattgcttattgctaggattatctcttctaa 1108745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 364
Target Start/End: Original strand, 1106998 - 1107096
Alignment:
Q  270 ctactcttttggtaaattcctttgcaatctaaacattcataga----accaatagcagtgaaatatatcaaatcatttctattgcttattgctaggatt 364  Q
    |||||||||||||||||| |||||||||||||||||||||  |    | |||||||| |||||| ||||||||||||||||||||||| |||| |||||    
T  1106998 ctactcttttggtaaatttctttgcaatctaaacattcattcatacgagcaatagcactgaaatttatcaaatcatttctattgcttactgctgggatt 1107096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 36167182 - 36167081
Alignment:
Q  7 atgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacaga 106  Q
    |||||||||||||||||| ||||||||| ||||| |||  ||||| ||||||||||||||||| |||||||||||| | | |||| |||||| |||| ||    
T  36167182 atgctaatatttgtatttatacattagtgaaaaagtataatcaaagtaagtcaagtgaatagtacacattgcaaaaatgatacatgtattttaaaacgga 36167083  T
Q  107 gg 108  Q
    ||    
T  36167082 gg 36167081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3370406 - 3370487
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||  ||| |||||||||| || |||| |||||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  3370406 tcttacatattaacatttgtatttatatattaattaaaaaatatggtcaaagtaagtcatgtgaacagtccacattgcaaaa 3370487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5173363 - 5173282
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||| |||||||||||||| || |||||||||| |||||| ||||| ||| |||  |||||||| ||||||||||||    
T  5173363 tcttacatgttaatatttgtatttatatattagttaaataatatgatcaaagtaaatcatatgaatagtacacattgcaaaa 5173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 6414117 - 6414217
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||| | ||| |||| |||| || |||| ||||||| |||||||||| ||||||| |||||||||||||||||||||| |  ||||| |||||| |||    
T  6414117 ttacataccaatctttgcatttatatattatttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgtgacatttattttaaaa 6414216  T
Q  103 c 103  Q
    |    
T  6414217 c 6414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 463 - 509
Target Start/End: Original strand, 1107126 - 1107172
Alignment:
Q  463 caacattaaaatatcaacaatgaacaacatacacaacaactaatgca 509  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  1107126 caacattgaaatatcaacaatgaacaacatgcacaacaactaatgca 1107172  T

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Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33700223 - 33700299
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 77  Q
    |||||| | |||| |||||||||| || ||||||||||||||||||||||| ||||  | ||||||||||| |||||    
T  33700223 tcttacttactaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgcgcattg 33700299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 13217223 - 13217273
Alignment:
Q  53 taagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    |||||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  13217223 taagtcaagtgaatagtgtacattgcaaaaattggacatgtattttgaaac 13217273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18090440 - 18090351
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacat 91  Q
    ||||| ||||||| |||| ||||| || ||||||||||||||||| || ||||||||||  | |||||||||||||| |||| || |||||    
T  18090440 tcttatatgctaacatttatatttatatattagttaaaaaatatgatc-aaataagtcatataaatagtgcacattgaaaaaattcgacat 18090351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38497184 - 38497088
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||           ||||||||||||||||||||||| |||| ||  ||||||||||| |    
T  38497184 tcttccatgctaatatttgtatttatacattagttaaaaagta-----------agtcaagtgaatagtgcacattgtaaaaattgaacatatattttaa 38497096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 541 - 577
Target Start/End: Original strand, 1107169 - 1107205
Alignment:
Q  541 tgcatactgtttcaaatcaaatacaaaaccagaaatc 577  Q
    |||||||||||||| ||||||||||||||||||||||    
T  1107169 tgcatactgtttcagatcaaatacaaaaccagaaatc 1107205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 276
Target Start/End: Original strand, 1108522 - 1108607
Alignment:
Q  189 atgacattgtgcttgtttttccttattttgcatccattctatccctccaaatactcctttccaactgaaaagata-ctacttctactct 276  Q
    |||||||||||||||||||| |||||||||  | | |||||||||||| ||||||||| ||||||||||| |||| |||| ||||||||    
T  1108522 atgacattgtgcttgttttt-cttattttgtgt-ctttctatccctcc-aatactcctctccaactgaaatgatacctacctctactct 1108607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 18020963 - 18020928
Alignment:
Q  16 tttgtatttgtacattagttaaaaaatatggtcaaa 51  Q
    |||||||||||| |||||||||||||||||||||||    
T  18020963 tttgtatttgtatattagttaaaaaatatggtcaaa 18020928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40716673 - 40716715
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaata 43  Q
    ||||||||||||| |||||||||| || |||||||||||||||    
T  40716673 tcttacatgctaaaatttgtatttatatattagttaaaaaata 40716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18035212 - 18035163
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaa 50  Q
    ||||||||||||| ||||| |||| || |||||||||||| |||||||||    
T  18035212 tcttacatgctaacatttgcatttatatattagttaaaaattatggtcaa 18035163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8058974 - 8059030
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||| ||| || ||||| | |||||| |||||| ||||||||||||||||||||||    
T  8058974 tcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagt 8059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17257801 - 17257906
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  17257801 tcttacatgctaatatttgtatttgtacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattagacatgtattttga 17257900  T
Q  101 aacaga 106  Q
    ||||||    
T  17257901 aacaga 17257906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18668838 - 18668945
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||| ||||||||    
T  18668838 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagcaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 18668937  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  18668938 aacggagg 18668945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4148043 - 4147936
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||    
T  4148043 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttga 4147944  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  4147943 aacggagg 4147936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 22054884 - 22054782
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| || ||||| ||||||||    
T  22054884 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttga 22054785  T
Q  101 aac 103  Q
    |||    
T  22054784 aac 22054782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19088108 - 19088215
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| | |||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  19088108 tcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 19088207  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  19088208 aacggagg 19088215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20226448 - 20226551
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||  |||| ||||||||    
T  20226448 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttga 20226547  T
Q  101 aaca 104  Q
    ||||    
T  20226548 aaca 20226551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22120432 - 22120535
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||  |||| ||||||||    
T  22120432 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgtacatgtattttga 22120531  T
Q  101 aaca 104  Q
    ||||    
T  22120532 aaca 22120535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 24624091 - 24624198
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  24624091 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttga 24624190  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  24624191 aacggagg 24624198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32414829 - 32414936
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  32414829 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatgtattttga 32414928  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  32414929 aacggagg 32414936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32671928 - 32671821
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||    
T  32671928 tcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttga 32671829  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  32671828 aacggagg 32671821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 17213934 - 17214035
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||| |||||| |||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  17213934 tcttacatgctaatatttgtatttataaattagttaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattagacatgtattttga 17214033  T
Q  101 aa 102  Q
    ||    
T  17214034 aa 17214035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6563338 - 6563231
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||  |||| ||||||||    
T  6563338 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattgcaaaaattgaacatgtattttga 6563239  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  6563238 aacggagg 6563231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24955546 - 24955633
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttaga 88  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||    
T  24955546 tcttacatgctaatatttgtatttattcattagttaaaaaatatgatcaaaataagtcaagtgaataatgcacattacaaaaattaga 24955633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3989414 - 3989511
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    ||||||||||||||| ||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| |||||||    
T  3989414 tcttacatgctaatagttgtattta-acattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttg 3989511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15383080 - 15383182
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||| ||| |||||||| |||||| |||||||||||||| || ||||| ||||||||    
T  15383080 tcttacatgctaatatttgtatttatagattagttaaaaagtatggttaaagtaagtcaaatgaataatgcacattgcaaaaattggacatgtattttga 15383179  T
Q  101 aac 103  Q
    |||    
T  15383180 aac 15383182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1040936 - 1040855
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||    
T  1040936 tcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaa 1040855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20437163 - 20437260
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaa-tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattt 97  Q
    ||||||||| | |||||||||||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||| |||||    
T  20437163 tcttacatgttgatatttgtatttatacattagttaaaaaaatatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattt 20437260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 28477864 - 28477753
Alignment:
Q  2 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaa 101  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||  |||||| ||||||||| |||||||||||| |  ||||| |||||||||    
T  28477864 cttacatgctaatatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaa 28477765  T
Q  102 acagaggaaata 113  Q
    | ||| ||||||    
T  28477764 atagatgaaata 28477753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 31569176 - 31569278
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||| ||||||||||||||| ||||||| | ||||| ||| |||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||    
T  31569176 tcttacattctaatatttgtatttatacattaataaaaaagtatagtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttga 31569275  T
Q  101 aac 103  Q
    |||    
T  31569276 aac 31569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 29790317 - 29790213
Alignment:
Q  2 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaa 101  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||| || ||||||| |||||||||  ||||||||||| |  ||||| |||||||||    
T  29790317 cttacatgctaatatttgtatttatatattagttaaaaattatggtccaagtaagtcatgtgaatagtatacattgcaaaattgcgacatgtattttgaa 29790218  T
Q  102 acaga 106  Q
    |||||    
T  29790217 acaga 29790213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 29693994 - 29693883
Alignment:
Q  2 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaa 101  Q
    ||||||||||| ||||||||||| || |||||||||||| ||||||||||  |||||| ||||||||| |||||||||||| |  ||||| |||||||||    
T  29693994 cttacatgctagtatttgtatttatatattagttaaaaattatggtcaaagcaagtcatgtgaatagtacacattgcaaaattgtgacatgtattttgaa 29693895  T
Q  102 acagaggaaata 113  Q
    | ||| ||||||    
T  29693894 atagatgaaata 29693883  T

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Target: chr6; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 25475977 - 25476074
Alignment:
Q  20 tatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagaggaaataataa 117  Q
    ||||| ||||||||||||||| || ||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||||| |||| | ||||||    
T  25475977 tatttatacattagttaaaaagtaaggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaacggagggagtaataa 25476074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 15337598 - 15337495
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||||| | ||||||| |||| |||| |||| |  || || ||||||||||    
T  15337598 ttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaataatgcatattgtaaaattgtgaaatgtattttgaaa 15337499  T
Q  103 caga 106  Q
    ||||    
T  15337498 caga 15337495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12226087 - 12225986
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||| ||||||||| || |||   |||| ||||| || ||||||||    
T  12226087 tcttacatgctaatatttatatttatacattagttaaaaagtatgatcaaaataagtccagtgaatagcgcgcatcataaaaattagatatgtattttga 12225988  T
Q  101 aa 102  Q
    ||    
T  12225987 aa 12225986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 19240742 - 19240823
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||  |||||||||||    
T  19240742 tcttacttgcaaatatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaatagtatacattgcaaaa 19240823  T

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Target: chr6; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 21540789 - 21540880
Alignment:
Q  11 taatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||||||||||| || | ||||| |||| |||||||||| |||||||| |||||||||||||||| |||| ||| |||| ||||||||||    
T  21540789 taatatttgtatttataaactagtttaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattaaacatgtattttgaaa 21540880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 10298725 - 10298798
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 76  Q
    ||||||||||| |||||||||| || |||||| |||||||||||||||| ||||  | ||||||||||||||||    
T  10298725 ttacatgctaacatttgtatttatatattagtgaaaaaatatggtcaaattaagctatgtgaatagtgcacatt 10298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 10520570 - 10520478
Alignment:
Q  11 taatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    |||||| ||||||| |||||||||||| |  |||||||||| |||||||| |||||| | |||||||||||| ||  |||| |||||||||||    
T  10520570 taatatctgtatttatacattagttaataggtatggtcaaagtaagtcaaatgaataatacacattgcaaaaattgaacatgtattttgaaac 10520478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4440962 - 4440860
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||||||||| ||  |||  |||||| |||||||||| ||||| |  ||||||||||||||| ||||| |   |||||||||||||    
T  4440962 tcttacatgctaacatttgtatttatatgttacctaaaaagtatggtcaaagtaagttatatgaatagtgcacattacaaaaatgcaacatatattttga 4440863  T
Q  101 aac 103  Q
    |||    
T  4440862 aac 4440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31869820 - 31869718
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||||||||| || ||||||||||||| ||||||||| ||| | | | |||||||| |||||| ||||    ||||| ||||||||    
T  31869820 tcttacatgctaacatttgtatttatatattagttaaaaaaaatggtcaaagtaaattatgggaatagtgtacattgtaaaatcgcgacatgtattttga 31869721  T
Q  101 aac 103  Q
    |||    
T  31869720 aac 31869718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5495361 - 5495307
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataa 55  Q
    ||||||||||||| |||||||||| || ||||||||||||| ||| |||||||||    
T  5495361 tcttacatgctaacatttgtatttatatattagttaaaaaacatgatcaaaataa 5495307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8101712 - 8101664
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtca 49  Q
    ||||||||| ||| |||||||||| || |||||||||||||||||||||    
T  8101712 tcttacatgttaacatttgtatttatatattagttaaaaaatatggtca 8101664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23158059 - 23158115
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||||||| ||| |||||||||| || |||||||||||||| |||||||| |||||    
T  23158059 tcttacatgttaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 23158115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1260542 - 1260492
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 51  Q
    |||||| |||||| | |||||||| || |||||||||||||||||||||||    
T  1260542 tcttacgtgctaacaattgtatttatatattagttaaaaaatatggtcaaa 1260492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3623860 - 3623909
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 51  Q
    ||||||||||||| |||||||||| || ||||||| |||||||||||||||    
T  3623860 tcttacatgctaacatttgtatttatatattagtt-aaaaatatggtcaaa 3623909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 14214065 - 14214138
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 76  Q
    ||||||||||| |||| ||||| || ||| ||||||||||| |||||||| |||||   |||||| ||||||||    
T  14214065 ttacatgctaacatttatatttatatattggttaaaaaatacggtcaaaacaagtcggatgaataatgcacatt 14214138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 3e-40; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7439015 - 7438907
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||||    
T  7439015 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataagtcaagtgaataatgcatattgcaaaaattagacatgtattttga 7438916  T
Q  101 aacagagga 109  Q
    |||||||||    
T  7438915 aacagagga 7438907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16778617 - 16778510
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  16778617 tcttacatgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagccaagtgaatagtgcacattgcaaaagttggacatgtattttga 16778518  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  16778517 aacggagg 16778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47156139 - 47156023
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  47156139 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 47156040  T
Q  101 aacagaggaaataataa 117  Q
    ||| |||| | ||||||    
T  47156039 aacggagggagtaataa 47156023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20885215 - 20885108
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| || ||||| ||||||||    
T  20885215 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtccacattgtaaaaattggacatgtattttga 20885116  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  20885115 aacggagg 20885108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28061665 - 28061772
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  28061665 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 28061764  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  28061765 aacggagg 28061772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32431508 - 32431615
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||    
T  32431508 tcttacatactaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaatttgacatatattttga 32431607  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  32431608 aacggagg 32431615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36623420 - 36623313
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  36623420 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 36623321  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  36623320 aacggagg 36623313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7457872 - 7457973
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  7457872 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagt-aagtgaatagtgcacattgcaaaacttagacatgtattttga 7457970  T
Q  101 aac 103  Q
    |||    
T  7457971 aac 7457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 40256169 - 40256067
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||| || ||||| ||||||||    
T  40256169 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagagcacattgcaaaaattggacatgtattttga 40256070  T
Q  101 aac 103  Q
    |||    
T  40256069 aac 40256067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42890493 - 42890595
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  42890493 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaaatgaatagtgcacattgcaaaaattggacatgtattttga 42890592  T
Q  101 aac 103  Q
    |||    
T  42890593 aac 42890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36585221 - 36585112
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| || || || ||||||||    
T  36585221 tcttacatgctaatatttgtatttatacattagtttaaaagtatggtaaaaataagtcaagtgaatagtgcacattgcaaaaattggatatgtattttga 36585122  T
Q  101 aacagaggaa 110  Q
    ||| ||||||    
T  36585121 aacggaggaa 36585112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38851997 - 38852104
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  38851997 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattggaaaaattggacatgtattttga 38852096  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  38852097 aacggagg 38852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40090068 - 40090175
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || |||||||||||| |    
T  40090068 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgaaaaaattggacatatattttaa 40090167  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  40090168 aacggagg 40090175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41898100 - 41897993
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  41898100 tcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 41898001  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  41898000 aacggagg 41897993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6174948 - 6174846
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| | |||||||| |||||||||||| |||||||| || ||||||||||||||    
T  6174948 tcttacatgctaatgtttgtatttatacattagttaaaaaatatggtcacagtaagtcaaatgaatagtgcaccttgcaaaaattggacatatattttga 6174849  T
Q  101 aac 103  Q
    |||    
T  6174848 aac 6174846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 39130076 - 39130178
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| | || |||||| |    
T  39130076 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagaaagtcaagtgaatagtgcacattgcaaaaattaaagatgtattttaa 39130175  T
Q  101 aac 103  Q
    |||    
T  39130176 aac 39130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 46479941 - 46479839
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||| ||||||||||||||| |||| ||| |||| ||||||||    
T  46479941 tcttacatgctaatatttgtatttatacattagttaaaaattttggtcaaagtaagtcaagcgaatagtgcacattgtaaaaattaaacatgtattttga 46479842  T
Q  101 aac 103  Q
    |||    
T  46479841 aac 46479839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44732124 - 44732043
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||    
T  44732124 tcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattgcaaaa 44732043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48602548 - 48602441
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| |||||||||||||||| |||| || | ||| ||||||||    
T  48602548 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattggaaaaattgggcatgtattttga 48602449  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  48602448 aacggagg 48602441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11502730 - 11502833
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||| |||| |||| |||||||| ||||| || ||||| ||||||||    
T  11502730 tcttacatgctaatatttgtatttatacattagttaaaaagtatgatcaaagtaagttaagtcaataatgcacattacaaaaattggacatgtattttga 11502829  T
Q  101 aaca 104  Q
    ||||    
T  11502830 aaca 11502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 25566702 - 25566799
Alignment:
Q  5 acatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    |||||||||||||||||||  ||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| |||||||||||    
T  25566702 acatgctaatatttgtatta-tacattagttagaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttgaaac 25566799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 46322127 - 46322216
Alignment:
Q  13 atatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||||    
T  46322127 atatttgtattgatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttgaaa 46322216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6766700 - 6766807
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| | ||||||| |||| |||| |||| |  ||||| ||||||||    
T  6766700 tcttacatgctaacatttgcatttatacattagttaaaaaatatggtcaaaataagttatgtgaataatgcagattgtaaaattgcgacatgtattttga 6766799  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  6766800 aacggagg 6766807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 8683923 - 8683828
Alignment:
Q  8 tgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    ||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||| |||||||| ||||| || ||||| |||||| ||||    
T  8683923 tgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacatttcaaaaattggacatgtattttaaaac 8683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42877498 - 42877391
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||| ||||||||| ||||| ||||||||||||||| |||||||||| ||||| || | ||||||||||||| ||||| || ||||| ||||||||    
T  42877498 tcttacattctaatatttttatttatacattagttaaaaagtatggtcaaagtaagttaaattaatagtgcacattacaaaatttggacatgtattttga 42877399  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  42877398 aacggagg 42877391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3851186 - 3851090
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||| || |||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||   |||||||||||||| || ||||||||||||||    
T  3851186 tcttacgtgttaatatttgtatttatacattagttaaaaagtattgtcaaagtaagtcaagtgaa---tgcacattgcaaaaattggacatatattttga 3851090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30342186 - 30342105
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||| |||||| ||| ||||||||||| ||||||||||||||    
T  30342186 tcttacatactaatatttgtatttatacattagttaaaaagtatagtcaaagtaaatcaagtgaataatgcacattgcaaaa 30342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35117237 - 35117157
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||| ||||| ||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||    
T  35117237 tcttacatgctaatatttatatttatacattagttaaaag-tatggtcaaagtaagtcaagtgaatagtgcatattgcaaaa 35117157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41088699 - 41088598
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||  |||| |||||| |||| |||| || ||||| ||||||||    
T  41088699 tcttacatgttaatatttgcatttatacattagttaaaaaatatggtcaaagtaagtcagatgaacagtgcatattgtaaaatttggacatgtattttga 41088600  T
Q  101 aa 102  Q
    ||    
T  41088599 aa 41088598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5788527 - 5788633
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||| ||||||||||||||| ||||||||| ||||| |||| | ||| |||||||| |||||||||| |||  ||||| |||||||| |||||| |    
T  5788527 tcttacatactaatatttgtatttatacattagtaaaaaagtatgattaaagtaagtcaattgaatagtgctcatcacaaaaattagacatgtattttta 5788626  T
Q  101 aacagag 107  Q
    |||||||    
T  5788627 aacagag 5788633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2198714 - 2198607
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||| || |||||||||||||| ||||||||||||||| |||| ||||||||| |||  |||||||| |||||||||||  ||| |||| |||||| |    
T  2198714 tcttacttgttaatatttgtatttatacattagttaaaaagtatgttcaaaataaatcagatgaatagtacacattgcaaatattacacatctattttaa 2198615  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  2198614 aacggagg 2198607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4131653 - 4131755
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||  ||||||||| || ||||||||||||||||||| ||| ||||| | |||||||||  |||||| |||| |  ||||||||||||||    
T  4131653 tcttacatgctaacttttgtatttatatattagttaaaaaatatggttaaagtaagttatgtgaatagtatacattgtaaaattgcgacatatattttga 4131752  T
Q  101 aac 103  Q
    |||    
T  4131753 aac 4131755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 46103520 - 46103582
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtg 63  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||    
T  46103520 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtg 46103582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 26161706 - 26161633
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 76  Q
    |||||||||||||||||||||| || ||||||||||||  ||||||||||||| ||| ||||||||||| ||||    
T  26161706 ttacatgctaatatttgtatttatatattagttaaaaagcatggtcaaaataaatcatgtgaatagtgcgcatt 26161633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 35570199 - 35570306
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagtt-----aaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatat 95  Q
    ||||||||||||| ||||||||||||| |||||||     |||||||||||||||| |||||   ||||||||||||||||| |||| |  ||||| |||    
T  35570199 tcttacatgctaaaatttgtatttgtatattagttaaaaaaaaaaatatggtcaaagtaagttttgtgaatagtgcacattgtaaaattgcgacatgtat 35570298  T
Q  96 tttgaaac 103  Q
    ||||||||    
T  35570299 tttgaaac 35570306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5529123 - 5529021
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||| |||||||| |||||||||||||||| ||||||||||   | || ||||||| |||||| |||| |  ||||| ||||||||    
T  5529123 tcttacatgctaacatttttatttgtatattagttaaaaaatatagtcaaaataatctacgtaaatagtgtacattgtaaaattaggacatgtattttga 5529024  T
Q  101 aac 103  Q
    |||    
T  5529023 aac 5529021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7169238 - 7169136
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||| ||| |||||||||||||| || |||||||||||||||| |||||| ||| ||| |||||||   |||||||||||| |  ||||| ||||||||    
T  7169238 tcttatatgttaatatttgtatttatatattagttaaaaaatatagtcaaagtaaatcatgtgaatatgacacattgcaaaattatgacatgtattttga 7169139  T
Q  101 aac 103  Q
    |||    
T  7169138 aac 7169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36341732 - 36341630
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||| |||| |||| ||||| ||  ||||||||||| ||| || ||| ||||||| |||||||||||||||||||||| |  ||||| ||||||||    
T  36341732 tcttacattctaacatttatatttatatgttagttaaaaagtatcgttaaattaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttga 36341633  T
Q  101 aac 103  Q
    |||    
T  36341632 aac 36341630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 41134638 - 41134735
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||     ||||||||||| |||||||| |||||||| ||||||| |||| ||  |||| |||||| |    
T  41134638 tcttacatgctaatatttgtatttatacattagtt-----atatggtcaaagtaagtcaaatgaatagtacacattgtaaaaattgaacatgtattttaa 41134732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27045558 - 27045660
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||| ||||||| |||||||||| || ||||||||||||||||||||||| |||  || |||||||||  |||||| |||| |   |||| ||||||||    
T  27045558 tcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaaaccatgtgaatagtatacattgtaaaattgcaacatgtattttga 27045657  T
Q  101 aac 103  Q
    |||    
T  27045658 aac 27045660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21379856 - 21379816
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaa 41  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  21379856 tcttacatgctaatatttgtatttatacattagctaaaaaa 21379816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34750614 - 34750550
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaa 65  Q
    ||||||||| ||| |||| |||||||| |||||||||||| || ||||||| ||||||| |||||    
T  34750614 tcttacatgttaacatttttatttgtatattagttaaaaagtagggtcaaagtaagtcatgtgaa 34750550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 42662284 - 42662197
Alignment:
Q  15 atttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    |||||||||| || |||||||||||| |||||||||| ||||  | ||||||| | |||||||||||| |  ||||| |||||||||||    
T  42662284 atttgtatttatatattagttaaaaagtatggtcaaagtaag-aatgtgaataatacacattgcaaaattgcgacatgtattttgaaac 42662197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 16870644 - 16870739
Alignment:
Q  15 atttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagaggaa 110  Q
    |||| ||||| || ||||||||| ||||||||||||| ||||| |  ||||||||||| |||| ||||    ||||| ||||||| ||||||||||    
T  16870644 atttatatttatatattagttaacaaatatggtcaaagtaagttatttgaatagtgcatattgtaaaaccgcgacatgtattttggaacagaggaa 16870739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 23707577 - 23707612
Alignment:
Q  5 acatgctaatatttgtatttgtacattagttaaaaa 40  Q
    |||||||||||||||||||| |||||||||||||||    
T  23707577 acatgctaatatttgtatttatacattagttaaaaa 23707612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37467457 - 37467503
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggt 47  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||||    
T  37467457 tcttaaatgctaacatttgtatttatatattagttaaaaaatatggt 37467503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 38767223 - 38767265
Alignment:
Q  15 atttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    |||||||||| || ||||||||||||||||||||||| |||||    
T  38767223 atttgtatttatatattagttaaaaaatatggtcaaagtaagt 38767265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 3785623 - 3785582
Alignment:
Q  10 ctaatatttgtatttgtacattagttaaaaaatatggtcaaa 51  Q
    |||| |||||||||| || |||||||||||||||||||||||    
T  3785623 ctaacatttgtatttatatattagttaaaaaatatggtcaaa 3785582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 45331992 - 45331943
Alignment:
Q  33 gttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||||||||||||| |||||||  |||||| |||| |||||||||    
T  45331992 gttaaaaaatatggtcaaagtaagtcatatgaataatgcatattgcaaaa 45331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 49101963 - 49102044
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||| || |||||||||| |  |||||||||||||||||   ||||||||| |  ||||||||||| |||| ||||    
T  49101963 tcttacatgcaaaaatttgtatttatgtattagttaaaaaatatgacaaaaataagttatatgaatagtgcatattgtaaaa 49102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 49110634 - 49110695
Alignment:
Q  15 atttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 76  Q
    |||||||||  || ||||||||||||||||||||||| ||| |||  |||||||| ||||||    
T  49110634 atttgtattaatatattagttaaaaaatatggtcaaagtaaatcatttgaatagtacacatt 49110695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 8e-38; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33803634 - 33803518
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaa-tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    ||||||| |||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  33803634 tcttacaagctaatatttatatttatacattagttaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttg 33803535  T
Q  100 aaacagaggaaataata 116  Q
    ||| |||||||||||||    
T  33803534 aaatagaggaaataata 33803518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21797668 - 21797566
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||||    
T  21797668 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaaataaatcaagtgaatagtgcacattgcaaaaattggacatgtattttga 21797569  T
Q  101 aac 103  Q
    |||    
T  21797568 aac 21797566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13499485 - 13499592
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  13499485 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 13499584  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  13499585 aacggagg 13499592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42490346 - 42490453
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  42490346 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 42490445  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  42490446 aacggagg 42490453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 27010624 - 27010731
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| | |||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  27010624 tcttacatgctaatatttgtatttatatattagttaaaaagtttggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 27010723  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  27010724 aacggagg 27010731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34912292 - 34912399
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||  ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  34912292 tcttacaatctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 34912391  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  34912392 aacggagg 34912399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 39866291 - 39866398
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| |||||| |    
T  39866291 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaa 39866390  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  39866391 aacggagg 39866398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 42761633 - 42761740
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  42761633 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 42761732  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  42761733 aacggagg 42761740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6910446 - 6910344
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||| ||||| ||||||||    
T  6910446 tcttacatgttaatatttgtatttatacattagttaaaaaatatggttaaagtaagtcaagtgaatagtgtacattgtaaaagttggacatgtattttga 6910347  T
Q  101 aac 103  Q
    |||    
T  6910346 aac 6910344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 27334881 - 27334983
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  27334881 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttga 27334980  T
Q  101 aac 103  Q
    |||    
T  27334981 aac 27334983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 54507753 - 54507639
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||| || || || ||||||||    
T  54507753 tcttacatgctaatatctgtatttatacattagttaaaaagtataatcaaaataagtcaagtgaatagtgcatattgcaaaaattggatatgtattttga 54507654  T
Q  101 aacagaggaaataat 115  Q
    ||| |||||| ||||    
T  54507653 aacggaggaagtaat 54507639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38137936 - 38137855
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  38137936 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaaataaatcaagcgaatagtgcagattgcaaaa 38137855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20765308 - 20765201
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| || |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| |||||| |    
T  20765308 tcttacatgttaatatttgtatttatatattagttaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaa 20765209  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  20765208 aacggagg 20765201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33415911 - 33415804
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| | ||||  ||||||||||||| || ||||| ||||||||    
T  33415911 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaataaataacgcacattgcaaaaattggacatgtattttga 33415812  T
Q  101 aacagagg 108  Q
    ||||||||    
T  33415811 aacagagg 33415804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 19823993 - 19823905
Alignment:
Q  20 tatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagagg 108  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||    
T  19823993 tatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttgaaacggagg 19823905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30213916 - 30213845
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgca 72  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  30213916 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgca 30213845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36227657 - 36227576
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||| |||||||| |||||||||| ||||||||||    
T  36227657 tcttacatgctaatatttgtatttatacattaattgaaaaatatggtcaaagtaagtcaaatgaatagtgcgcattgcaaaa 36227576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21005405 - 21005298
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||| ||||| || |||| ||||||| |||||||||| ||||| ||||||||||||||| |||||||| ||  |||| ||||||||    
T  21005405 tcttacatgctaatatttatatttatatattaattaaaaagtatggtcaaagtaagtgaagtgaatagtgcacgttgcaaaaattgaacatgtattttga 21005306  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  21005305 aacggagg 21005298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43467892 - 43467994
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||| |||||||||| | |||| ||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||| || | ||| ||||||||    
T  43467892 tcttacctgctaatattagaatttatacatcagttaaaaagtatggtcaaagtaagtcaagtgaatagtacacattgcaaaaattggtcatgtattttga 43467991  T
Q  101 aac 103  Q
    |||    
T  43467992 aac 43467994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 43181505 - 43181608
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaa-tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    |||||||| ||||||||| ||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||||| | ||| ||| |||| ||||||     
T  43181505 tcttacatactaatatttatatttatacattagttaaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattacgaaaattaaacatgtattttt 43181604  T
Q  100 aaac 103  Q
    ||||    
T  43181605 aaac 43181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41252913 - 41253018
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||| ||||||| |||||||||| || ||||||||||||||||||| ||| ||||  |  |||||||||||||||| |||| |  ||||||||||||||    
T  41252913 tcttatatgctaacatttgtatttatatattagttaaaaaatatggttaaagtaagctatatgaatagtgcacattgtaaaattgcgacatatattttga 41253012  T
Q  101 aacaga 106  Q
    ||||||    
T  41253013 aacaga 41253018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15332956 - 15333061
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||||||||| || |||||||||||||| ||||||||  |||  | ||||||||||||||||| |||| |  ||||| |||||| |    
T  15332956 tcttacatgctaacatttgtatttatatattagttaaaaaatttggtcaaagcaagctatgtgaatagtgcacattgtaaaattgcgacatgtattttaa 15333055  T
Q  101 aacaga 106  Q
    ||||||    
T  15333056 aacaga 15333061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 45613660 - 45613583
Alignment:
Q  26 tacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    ||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||| || |||||  ||||||||||    
T  45613660 tacattagttaaaaagtatagtcaaagtaagtcaagtaaatagtgcacattgcaaaaattggacatgaattttgaaac 45613583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44561896 - 44561816
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaa 81  Q
    |||||||||  || |||||||||| ||  ||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  44561896 tcttacatgtcaacatttgtatttatatgttagttaaaaagtatggtcaaagtaagtcatgtgaatagtgcacattgcaaa 44561816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 3430426 - 3430505
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||| ||||  || ||||||||||||||||||||||| ||||| |  | |||||||||||||| ||||    
T  3430426 ttacatgctaatatttttattaatatattagttaaaaaatatggtcaaagtaagttatataaatagtgcacattgtaaaa 3430505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 25527516 - 25527416
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| || || ||||||||||||||||| || ||||||| |||||||   |||||||||||| |  ||||| ||||| ||    
T  25527516 tcttacatgttaatatttgtatttatatatcagttaaaaaatatggtcgaagtaagtcatgtgaata--tcacattgcaaaaatgcgacatgtatttcga 25527419  T
Q  101 aac 103  Q
    |||    
T  25527418 aac 25527416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 27813445 - 27813511
Alignment:
Q  8 tgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcaca 74  Q
    |||||| |||||||||| || |||||||||||||||| |||||||||||  | ||||||||||||||    
T  27813445 tgctaacatttgtatttatatattagttaaaaaatatagtcaaaataagctatgtgaatagtgcaca 27813511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 32220930 - 32220873
Alignment:
Q  46 gtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    |||||| ||||||||||||||||| |||||||||||| ||| |||| |||||| ||||    
T  32220930 gtcaaagtaagtcaagtgaatagtacacattgcaaaaattaaacatgtattttaaaac 32220873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52167321 - 52167240
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||  |||||||||||||| || |||| ||||||| ||||||||||| ||||||  |||||| | |||||| |||||    
T  52167321 tcttacatattaatatttgtatttatatattaattaaaaagtatggtcaaaagaagtcatatgaataatacacattacaaaa 52167240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 3017902 - 3017847
Alignment:
Q  2 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    |||| ||||||| |||||||||| || | |||||||||||||||||||||| ||||    
T  3017902 cttatatgctaacatttgtatttatataatagttaaaaaatatggtcaaaacaagt 3017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 14412260 - 14412301
Alignment:
Q  16 tttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||||||| || ||||||||||||||| |||||||||||||    
T  14412260 tttgtatttatatattagttaaaaaatacggtcaaaataagt 14412301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 15568085 - 15568189
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||| | ||| |||||||||| || ||||||||||||||||| ||||| |||   | || |||| ||||||||| |||| |  ||||| ||||||||    
T  15568085 tcttacacggtaacatttgtatttatatattagttaaaaaatatgatcaaattaaactatgtaaataatgcacattgtaaaattgcgacat-tattttga 15568183  T
Q  101 aacaga 106  Q
    ||||||    
T  15568184 aacaga 15568189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 22786740 - 22786630
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||| || ||||||  || || |||||||||||||||  |||||| ||||  | ||||||||||||||||  |||| |  ||||| || |||||    
T  22786740 tcttacatgcaaacatttgt--ttatatattagttaaaaaatagagtcaaagtaagctatgtgaatagtgcacattaaaaaattgcgacatgtagtttga 22786643  T
Q  101 aacagaggaaata 113  Q
    ||| |||||||||    
T  22786642 aacggaggaaata 22786630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16434805 - 16434861
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||| ||| || ||||| | |||||| |||||| ||||||||||||||||||||||    
T  16434805 tcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagt 16434861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17643843 - 17643795
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtca 49  Q
    ||||||||||||| ||||||||||  | |||||||||||||||| ||||    
T  17643843 tcttacatgctaacatttgtatttacatattagttaaaaaatatagtca 17643795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33128069 - 33128125
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||||||| |||||||| ||||| |  |||||||||||| |||| |||||||||||    
T  33128069 tcttacatgttaatatttatatttatgtattagttaaaaagtatgatcaaaataagt 33128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 41751566 - 41751610
Alignment:
Q  7 atgctaatatttgtatttgtacattagttaaaaaatatggtcaaa 51  Q
    ||||||| |||||||||| || ||||||||||||||||| |||||    
T  41751566 atgctaacatttgtatttatatattagttaaaaaatatgatcaaa 41751610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39358258 - 39358151
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  39358258 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 39358159  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  39358158 aacggagg 39358151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2183107 - 2183214
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  2183107 tcttacatgctaatatttgtattcatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 2183206  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  2183207 aacggagg 2183214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5405108 - 5405001
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  5405108 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 5405009  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  5405008 aacggagg 5405001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8042172 - 8042279
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  8042172 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 8042271  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  8042272 aacggagg 8042279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19141216 - 19141323
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  19141216 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 19141315  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  19141316 aacggagg 19141323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6223178 - 6223076
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  6223178 tcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttga 6223079  T
Q  101 aac 103  Q
    |||    
T  6223078 aac 6223076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7608161 - 7608059
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  7608161 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 7608062  T
Q  101 aac 103  Q
    |||    
T  7608061 aac 7608059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 44365269 - 44365167
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| || ||||| ||||||||    
T  44365269 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttga 44365170  T
Q  101 aac 103  Q
    |||    
T  44365169 aac 44365167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11841743 - 11841841
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| || ||||| |||||||    
T  11841743 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgcaaaaattggacatgtattttg 11841841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19262792 - 19262683
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| || | |||||||||||||| |||| || ||||| ||||||||    
T  19262792 tcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagttaaataaatagtgcacattgaaaaaattggacatgtattttga 19262693  T
Q  101 aacagaggaa 110  Q
    ||| ||||||    
T  19262692 aacggaggaa 19262683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 36072286 - 36072185
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||| |||| || ||||| ||||||||    
T  36072286 tcttacatgctaatatttatatttatacattagttaaaaaatatgatcaaagtaagtcaaatgaatagtgcatattgtaaaaattggacatgtattttga 36072187  T
Q  101 aa 102  Q
    ||    
T  36072186 aa 36072185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 7799959 - 7799857
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||||||||| || |||||||||||| || ||||||| ||||||| |||||||||||||||||||||| |  ||||| ||||||||    
T  7799959 tcttacatgctaacatttgtatttatatattagttaaaaagtagggtcaaagtaagtcatgtgaatagtgcacattgcaaaaatgcgacatgtattttga 7799860  T
Q  101 aac 103  Q
    |||    
T  7799859 aac 7799857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13125295 - 13125362
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatag 68  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  13125295 tcttagatgctaatatttgtatttatacattagttaaaaaatatggtgaaagtaagtcaagtgaatag 13125362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 33607476 - 33607387
Alignment:
Q  13 atatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||||||||| ||||||||||||||| |||  ||||| |||||||| |||||||||||||||| |||| || ||||| ||||||||||    
T  33607476 atatttgtatttatacattagttaaaaagtataatcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttgaaa 33607387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43444690 - 43444791
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||  || | | ||||||| ||||||||| |||| |  ||||| ||||||||    
T  43444690 tcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagaaaattatgtgaataatgcacattgtaaaattgcgacatgtattttga 43444789  T
Q  101 aa 102  Q
    ||    
T  43444790 aa 43444791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 24252070 - 24251970
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||||||||||| | ||||||| | || |||| |||| |  || || ||||||||||    
T  24252070 ttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagttatgtgaataatacatattgtaaaattgtgaaatgtattttgaaa 24251971  T
Q  103 c 103  Q
    |    
T  24251970 c 24251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9172296 - 9172358
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtg 63  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  9172296 tcttacatgctaacttttgtatttatacattagttaaaaaatatggtcaaagtaagtgaagtg 9172358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 11931803 - 11931701
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||| |  |||||| |||| |||| |||| |  ||||| ||||||||    
T  11931803 tcttaaatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagttatatgaataatgcatattgtaaaattgcgacatgtattttga 11931704  T
Q  101 aac 103  Q
    |||    
T  11931703 aac 11931701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 32774703 - 32774601
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||  |||||||| ||| | || |||||||||||| |||||||||| |||||||||| |||||||||||||  |||| ||  |||| ||||||||    
T  32774703 tcttacatattaatatttatatgtatatattagttaaaaagtatggtcaaagtaagtcaagtaaatagtgcacattataaaacttgaacatgtattttga 32774604  T
Q  101 aac 103  Q
    |||    
T  32774603 aac 32774601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31610803 - 31610876
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcaca 74  Q
    |||||||| |||| |||||||||| || ||||||||||||| ||||| ||||||||| | ||||||||||||||    
T  31610803 tcttacattctaacatttgtatttatatattagttaaaaaaaatggtaaaaataagttatgtgaatagtgcaca 31610876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44644982 - 44644905
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgc 78  Q
    ||||| ||| |||||||| ||||| || |||||||||||| |||||||||| |||| ||| |||||||||||||||||    
T  44644982 tcttatatgttaatatttatatttatatattagttaaaaagtatggtcaaagtaagacaattgaatagtgcacattgc 44644905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 9006939 - 9007035
Alignment:
Q  6 catgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| ||||  |  |||||| ||||||||| |||| |  ||||| ||||||||||    
T  9006939 catgctaacatttgtatttataaattagttaaaaaatatggtcaaagtaagctacatgaataatgcacattgtaaaattgcgacatgtattttgaaa 9007035  T

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Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22839077 - 22839157
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaa 81  Q
    ||||| ||||||| ||||  |||| || | ||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  22839077 tcttatatgctaacattttaatttatatactagttaaaaaatatggtcaaagtaagttatgtgaatagtgcacattgcaaa 22839157  T

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Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36177727 - 36177809
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaa-aatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||| ||| |||||||| ||||| || ||||||||||| |||||||||||||||| ||| ||||||| ||| ||||||||||    
T  36177727 tcttagatgttaatatttttatttatatattagttaaaaaaatatggtcaaaataaatcatgtgaataatgcgcattgcaaaa 36177809  T

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Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 36719474 - 36719565
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattt 97  Q
    ||||| |||||||||||||||||| |||     ||||||| |||||||||| |||||||||||||||||||   |||||||| || ||||| |||||    
T  36719474 tcttaaatgctaatatttgtatttatac-----ttaaaaagtatggtcaaagtaagtcaagtgaatagtgcttgttgcaaaaattggacatgtattt 36719565  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38839185 - 38839136
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaa 50  Q
    ||||| ||||||| |||||||||| || ||||||||||||||||||||||    
T  38839185 tcttatatgctaacatttgtatttatatattagttaaaaaatatggtcaa 38839136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42133864 - 42133763
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||| |||||||| |||||||||| || ||||||||||||||||| ||||| |||   |  |||||||||||||||  |||| |  ||||| ||||||||    
T  42133864 tctttcatgctaacatttgtatttatatattagttaaaaaatatgatcaaagtaaactatatgaatagtgcacattttaaaattacgacatgtattttga 42133765  T
Q  101 aa 102  Q
    ||    
T  42133764 aa 42133763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38292064 - 38292008
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||||||| ||| |||||||||| || | ||||||||||||||||||||| |||||    
T  38292064 tcttacatgttaacatttgtatttatatactagttaaaaaatatggtcaaagtaagt 38292008  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 13598523 - 13598472
Alignment:
Q  31 tagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||| |||||||||| |||||||  |||||||||||||||| ||||    
T  13598523 tagttaaaaagtatggtcaaagtaagtcatatgaatagtgcacattgaaaaa 13598472  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 16865165 - 16865108
Alignment:
Q  2 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtca 59  Q
    |||||||||||| |||||||||| ||  ||||||||||| ||| |||||| |||||||    
T  16865165 cttacatgctaacatttgtatttatatgttagttaaaaagtatcgtcaaagtaagtca 16865108  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31904030 - 31904099
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtg 70  Q
    |||||| || |||||||| ||||| || ||||||||||||||||||||| | ||||  | ||||||||||    
T  31904030 tcttacgtgataatatttatatttatatattagttaaaaaatatggtcagagtaagctatgtgaatagtg 31904099  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2831818 - 2831762
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||||||| || ||||| |||||||| ||||||  ||||||||||||||| |||||    
T  2831818 tcttacatgatattatttatatttgtatattagtagaaaaatatggtcaaagtaagt 2831762  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 3837271 - 3837323
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataa 55  Q
    ||||||||| |||||| ||||| || ||||||||||||||| ||| |||||||    
T  3837271 ttacatgctgatatttatatttatatattagttaaaaaatacggttaaaataa 3837323  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13117474 - 13117530
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||| || ||||||||| ||||| || || |||||||||||||||||||| |||||    
T  13117474 tcttagatactaatatttatatttatatatcagttaaaaaatatggtcaaagtaagt 13117530  T

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Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6402560 - 6402667
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||    
T  6402560 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaaataagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 6402659  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  6402660 aacggagg 6402667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16120590 - 16120697
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||||||    
T  16120590 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaataatgcacattgcaaaaattggacatgtattttga 16120689  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  16120690 aacggagg 16120697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 30003645 - 30003543
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| || ||||| ||||||||    
T  30003645 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttga 30003546  T
Q  101 aac 103  Q
    |||    
T  30003545 aac 30003543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11641217 - 11641318
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  11641217 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 11641316  T
Q  101 aa 102  Q
    ||    
T  11641317 aa 11641318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 36757636 - 36757737
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  36757636 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 36757735  T
Q  101 aa 102  Q
    ||    
T  36757736 aa 36757737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42788692 - 42788793
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| || ||||||||||||||    
T  42788692 tcttacatgcaaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatatattttga 42788791  T
Q  101 aa 102  Q
    ||    
T  42788792 aa 42788793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6766484 - 6766377
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  6766484 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaacatgtattttga 6766385  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  6766384 aacggagg 6766377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30701830 - 30701723
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| || ||||| ||||||||    
T  30701830 tcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattacaaaaattggacatgtattttga 30701731  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  30701730 aacggagg 30701723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40771922 - 40772029
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||| || ||||| ||||||||    
T  40771922 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgtaaaaattggacatgtattttga 40772021  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  40772022 aacggagg 40772029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9342795 - 9342897
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||| |||||||| | ||||||    
T  9342795 tcttacatgctaatatttgtatttatacattagttaaaaaatatgatcaaagtaagtcaagtgaataacgcacattgcaaaaattagacatgttttttga 9342894  T
Q  101 aac 103  Q
    |||    
T  9342895 aac 9342897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36399210 - 36399108
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||    
T  36399210 tcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattggacatgtattttga 36399111  T
Q  101 aac 103  Q
    |||    
T  36399110 aac 36399108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27292752 - 27292645
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| |||||| ||| |||||||||||||||| ||||||||| || ||||||||||||||    
T  27292752 tcttacatgctaatatttgtatttatactttagttaaaaagtatagtcaaagtaaatcaagtgaatagtgcagattgcaaaaattggacatatattttga 27292653  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  27292652 aacggagg 27292645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40977638 - 40977745
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||| || ||||| |||||||     
T  40977638 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagttagtcaagtgaatagtacacattgcaaaaattggacatgtattttgc 40977737  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  40977738 aacggagg 40977745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24321373 - 24321264
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaa--atatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||| ||| |||||||||||||||||||||||||| || ||||| ||||||    
T  24321373 tcttacatgctaatatttgtatttatacattagttaaaaattatatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattcgacatgtatttt 24321274  T
Q  99 gaaacagagg 108  Q
     |||| ||||    
T  24321273 aaaacggagg 24321264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 26910188 - 26910091
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 98  Q
    |||| |||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||| |||| ||||||    
T  26910188 tcttgcatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattatacatgtatttt 26910091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17306066 - 17305959
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||| ||||||| ||| |||||| |||||||||||||||||||||||||||||| || ||||| |||||| |    
T  17306066 tcttacatgctaatatttgtatttatatattaattaaaaagtatagtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttaa 17305967  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  17305966 aacggagg 17305959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 52024138 - 52024031
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||| |||||||||| ||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||  |||| ||||||||    
T  52024138 tcttacacgctaatatttatatttatacattagttaaaaattatggtcaaagtaagtgaagtgaatagtgcacattgcaaaaattgaacatgtattttga 52024039  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  52024038 aacggagg 52024031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 48375114 - 48375018
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattt 97  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||||| || ||||||||||| ||  ||||||||||    
T  48375114 tcttacatgctaatatttgtatttataaattagttaaaaaatatgatcaaaataagttaagtgaataatgtacattgcaaaaattgaacatatattt 48375018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 42735315 - 42735420
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaa---tatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattt 97  Q
    |||||||||||||||||||||||| || |||||||||||||   |||||||||| |||||||||||||||||||||||||||| | ||  |||| |||||    
T  42735315 tcttacatgctaatatttgtatttatatattagttaaaaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaataattgaacatgtattt 42735414  T
Q  98 tgaaac 103  Q
    ||||||    
T  42735415 tgaaac 42735420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15912486 - 15912594
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||||||||||||||  | || | | ||||| |||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  15912486 tcttacatgctaatatttgtatttaaaaataaataaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 15912585  T
Q  101 aacagagga 109  Q
     ||| ||||    
T  15912586 gacatagga 15912594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 28030831 - 28030933
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||||||||| ||  ||||||||||| |||||||||||||||||| || |||| |||||||||||||| |   |||| ||||||||    
T  28030831 tcttacatgctaacatttgtatttatatgttagttaaaaagtatggtcaaaataagtcatgtaaataatgcacattgcaaaaatgcaacatgtattttga 28030930  T
Q  101 aac 103  Q
    |||    
T  28030931 aac 28030933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4302230 - 4302149
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||  ||||| |||||||||| ||||||| |||||||||||    
T  4302230 tcttacatgctaatatttatatttatacattagttaaaaaacattatcaaagtaagtcaagtaaatagtgtacattgcaaaa 4302149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44647863 - 44647944
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||| ||||||||||||| ||||||| | ||||||| ||||    
T  44647863 tcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaa 44647944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42367446 - 42367513
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatag 68  Q
    ||||||||| || ||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||    
T  42367446 tcttacatgttagtatttgtatttatacattagttaaaaattatgatcaaagtaagtcaagtgaatag 42367513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30385295 - 30385370
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 76  Q
    |||||||| |||| |||||||||| || ||||||||||||||||||||||| |||   | ||||||||||||||||    
T  30385295 tcttacatactaacatttgtatttatatattagttaaaaaatatggtcaaagtaaactatgtgaatagtgcacatt 30385370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 3485358 - 3485460
Alignment:
Q  2 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaa 101  Q
    |||||||| ||| |||||||||| || ||||||||||||||||| ||||| ||||| | | |||||||||| |||| |||| |  ||||| |||||| ||    
T  3485358 cttacatgataacatttgtatttatatattagttaaaaaatatgatcaaagtaagttatgcgaatagtgcatattgtaaaattacgacatgtattttaaa 3485457  T
Q  102 aca 104  Q
    |||    
T  3485458 aca 3485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 15382576 - 15382678
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||| ||||||||||||||| || |||| ||||||||  |||||| | ||||| | |||||||||| |||||| |||| |  ||||| ||||||||    
T  15382576 tcttacatactaatatttgtatttatatattatttaaaaaaattggtcagagtaagttatgtgaatagtgtacattgtaaaattgcgacatgtattttga 15382675  T
Q  101 aac 103  Q
    |||    
T  15382676 aac 15382678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 40800537 - 40800638
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaa-aatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    ||||||||||||| |||||||||  || ||||||||||| |||||||||||| ||||| | |||| || ||||||||| |||| |  |||||||||||||    
T  40800537 tcttacatgctaacatttgtatta-tatattagttaaaaaaatatggtcaaagtaagttatgtgattaatgcacattgtaaaattacgacatatattttg 40800635  T
Q  100 aaa 102  Q
    |||    
T  40800636 aaa 40800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 38153427 - 38153528
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| ||| |||||||||| ||  ||||||||||| |||||| | | ||||||| ||||||||||||||||  |||| |  ||||| ||||||||    
T  38153427 tcttacatgataacatttgtatttatatgttagttaaaaagtatggtaacagtaagtcatgtgaatagtgcacattataaaaatgcgacatgtattttga 38153526  T
Q  101 aa 102  Q
    ||    
T  38153527 aa 38153528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34635019 - 34634939
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaa 81  Q
    ||||||||| ||| |||||||||| || ||||||||||||||||  ||||||||||| | ||||| | | |||||||||||    
T  34635019 tcttacatgttaacatttgtatttatatattagttaaaaaatattatcaaaataagttatgtgaaaacttcacattgcaaa 34634939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 44644510 - 44644586
Alignment:
Q  6 catgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||| |||||||||| || ||| ||||||||||||| ||||| ||||||| ||||||| | ||||||| ||||    
T  44644510 catgctaacatttgtatttatatatttgttaaaaaatatgatcaaagtaagtcatgtgaataatacacattgaaaaa 44644586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22575737 - 22575781
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatg 45  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  22575737 tcttacatgctaacatttgtatttatatattagttaaaaaatatg 22575781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27984667 - 27984597
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgca 72  Q
    ||||||| ||||| ||||||||| ||| |||||||| |||||||||||||| ||||  | ||||||||||||    
T  27984667 tcttacaagctaacatttgtattcgtatattagtta-aaaatatggtcaaagtaagcaatgtgaatagtgca 27984597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 16689920 - 16689862
Alignment:
Q  17 ttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacat 75  Q
    |||||||| || |||||||| |||||||| ||||| ||||| | |||||||||||||||    
T  16689920 ttgtatttatatattagttagaaaatatgatcaaagtaagttatgtgaatagtgcacat 16689862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 25170955 - 25170889
Alignment:
Q  35 taaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    ||||||||||||||||| ||||||||  ||||||||| |||| || || |||||||| |||||| ||||    
T  25170955 taaaaaatatggtcaaagtaagtcaa--gaatagtgcgcattacagaaattagacatgtattttaaaac 25170889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31445035 - 31444986
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaa 50  Q
    |||||||||| || |||||| ||| || ||||||||||||||||||||||    
T  31445035 tcttacatgcaaacatttgtgtttatatattagttaaaaaatatggtcaa 31444986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 25296730 - 25296832
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||    
T  25296730 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagatatgtattttga 25296829  T
Q  101 aac 103  Q
    |||    
T  25296830 aac 25296832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 44232227 - 44232329
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  44232227 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattagacatgtattttga 44232326  T
Q  101 aac 103  Q
    |||    
T  44232327 aac 44232329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2760877 - 2760984
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  2760877 tcttacatgctaatatttgtatttatatattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattgtaaaaattggacatgtattttga 2760976  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  2760977 aacggagg 2760984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26170098 - 26169991
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| || ||||| ||||||||    
T  26170098 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattgcaaaaattggacatgtattttga 26169999  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  26169998 aacggagg 26169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38416800 - 38416907
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  38416800 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattggacatgtattttga 38416899  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  38416900 aacggagg 38416907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47386436 - 47386543
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  | ||||| ||||||||    
T  47386436 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaatagtgcacattccaaaaagtggacatgtattttga 47386535  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  47386536 aacggagg 47386543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12240328 - 12240433
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||||| |||| || ||||| ||||||||    
T  12240328 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttga 12240427  T
Q  101 aacaga 106  Q
    ||||||    
T  12240428 aacaga 12240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17610392 - 17610285
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||| |||||| |    
T  17610392 tcttacatgctaatatttgtatttatacattagctaaaaaatatggtcaaagtaagtcaagtgaatagtgcatattgcaaaaattggacatgtattttaa 17610293  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  17610292 aacggagg 17610285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35686485 - 35686378
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||    
T  35686485 tcttacatgataatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtgaatagtgcacattgcaaaaattggacatgtattttga 35686386  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  35686385 aactgagg 35686378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38716998 - 38716892
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| | ||||||||||||||||||| || ||||| ||||||||    
T  38716998 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaa-ttaatagtgcacattgcaaaaattggacatgtattttga 38716900  T
Q  101 aacagagg 108  Q
    ||||||||    
T  38716899 aacagagg 38716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29830455 - 29830348
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||  |||| || ||||| ||||||||    
T  29830455 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattaaaaaaattggacatgtattttga 29830356  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  29830355 aacggagg 29830348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35381044 - 35381151
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||| |||||||||||||||| |||| || ||||| ||||||||    
T  35381044 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattgtaaaaattggacatgtattttga 35381143  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  35381144 aacggagg 35381151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 54330840 - 54330947
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||||||||| ||||||||||||| || ||||| ||||| ||    
T  54330840 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagtgaatagcgcacattgcaaaaattggacatgtatttcga 54330939  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  54330940 aacggagg 54330947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 55209724 - 55209831
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| ||| ||||||||||||||||||||| |||| || ||||| ||||||||    
T  55209724 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaaatcaagtgaatagtgcacattggaaaaattggacatgtattttga 55209823  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  55209824 aacggagg 55209831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 43967835 - 43967733
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||  |||| ||||||||    
T  43967835 tcttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaagttaatagtgcacattgcaaaaattgaacatgtattttga 43967736  T
Q  101 aac 103  Q
    |||    
T  43967735 aac 43967733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 55800941 - 55800831
Alignment:
Q  6 catgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacag 105  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||  | || ||| ||||||| |    
T  55800941 catgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattgcaaaaattgaagatgtatattgaaacgg 55800842  T
Q  106 aggaaataata 116  Q
    ||| |||||||    
T  55800841 agggaataata 55800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26125820 - 26125713
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||| ||  |  ||||||||||    
T  26125820 tcttacatgctaatatttgtatttatacattagttaaaaaatatggtcaaagtaagtcaagtgaataatgcatattgtaaaaattgaatttatattttga 26125721  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  26125720 aacggagg 26125713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31010326 - 31010219
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||| || || || ||||||||    
T  31010326 tcttacatgctaatatttttatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaattggatatgtattttga 31010227  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  31010226 aaccgagg 31010219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 12625363 - 12625261
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||||||| ||||||||| ||  |||| ||||||||    
T  12625363 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcagatgaatagtgcatattgcaaaaattgaacatgtattttga 12625264  T
Q  101 aac 103  Q
    |||    
T  12625263 aac 12625261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19433508 - 19433619
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaa----atatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatt 96  Q
    |||||||||||||||||||||||| |||| ||||||||||    ||||||||||| ||||||||||||| |||||||||||||||| ||  |||| ||||    
T  19433508 tcttacatgctaatatttgtatttatacaatagttaaaaagtatatatggtcaaagtaagtcaagtgaaaagtgcacattgcaaaaattgaacatgtatt 19433607  T
Q  97 ttgaaacagagg 108  Q
    ||||||||||||    
T  19433608 ttgaaacagagg 19433619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 25918315 - 25918213
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||| ||||| |||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| || ||||| |||||| |    
T  25918315 tcttacatgctaatatttatatttatacattggttaaaaagtagggtcaaaataattcaagtgaatagtgcacattgcaaaaattggacatgtattttaa 25918216  T
Q  101 aac 103  Q
    |||    
T  25918215 aac 25918213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 50620832 - 50620934
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||||||| |||||| ||||||||||||||  |||||||||| ||||| |||||||||||||| ||||| ||| || |||||||||||| |    
T  50620832 tcttacatgctaatattagtatttatacattagttaaaatgtatggtcaaagtaagttaagtgaatagtgcatattgctaaaattggacatatattttaa 50620931  T
Q  101 aac 103  Q
    |||    
T  50620932 aac 50620934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 55191931 - 55191829
Alignment:
Q  6 catgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacag 105  Q
    |||||||||||||||||||  |||||| ||||||| ||| |||||| |||||||| ||||||||||||||||||||| ||  |||||||||||||||| |    
T  55191931 catgctaatatttgtatttacacattaattaaaaagtatagtcaaagtaagtcaaatgaatagtgcacattgcaaaaattgaacatatattttgaaacgg 55191832  T
Q  106 agg 108  Q
    |||    
T  55191831 agg 55191829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 3037090 - 3036985
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||||||||||||||||||| || |||||||||||| |||||||||| ||||||| ||||||||| ||||||| | || |  ||||| ||||||||||    
T  3037090 ttacatgctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcatgtgaatagtacacattgtataattacgacatgtattttgaaa 3036991  T
Q  103 cagagg 108  Q
    ||||||    
T  3036990 cagagg 3036985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 17446783 - 17446880
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 98  Q
    ||||||||| |||||||||||||| ||||||||||||||  |||||||||| | |||||| |||||||||||||||| |||| || ||||||||||||    
T  17446783 tcttacatgttaatatttgtatttatacattagttaaaatgtatggtcaaagttagtcaaatgaatagtgcacattgtaaaaattggacatatatttt 17446880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45291944 - 45291863
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||||| || |||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||    
T  45291944 tcttacatgctaatatttgtatttatatattagttaaaaagtatgatcaaagtaagtcaagtgaatagtgcacattggaaaa 45291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 54610975 - 54610872
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaat-agtgcacattgcaaaagttagacatatattttg 99  Q
    |||||||| ||||||| ||||||| ||||||| |||||||||||| | ||| |||||||||||||| |||| ||||||||||| ||| ||||||||||||    
T  54610975 tcttacatactaatatctgtatttatacattaattaaaaaatatgattaaagtaagtcaagtgaataagtgtacattgcaaaaattaaacatatattttg 54610876  T
Q  100 aaac 103  Q
    ||||    
T  54610875 aaac 54610872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 50205847 - 50205753
Alignment:
Q  9 gctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    |||||||||||||||| || |||||||||||| |||||||||| |||||||| ||||||||||||||| |||||  | ||||| |||||||||||    
T  50205847 gctaatatttgtatttatatattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacattacaaaaacttgacatgtattttgaaac 50205753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 19595815 - 19595736
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||||| ||||||||||||| | |||||| ||| |||||||||||||||||||| |||| ||||    
T  19595815 ttacatgctaatatttgtatttatacattagttaaagagtatggttaaagtaagtcaagtgaatagtgcatattgtaaaa 19595736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36523118 - 36523220
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| ||| |||||||||| || |||||||||||| ||| |||||| ||||||| || ||||||||| ||||||||| |  ||||||||||||||    
T  36523118 tcttacatgttaacatttgtatttatatattagttaaaaagtatagtcaaagtaagtcatgtaaatagtgcatattgcaaaaatgcgacatatattttga 36523217  T
Q  101 aac 103  Q
    |||    
T  36523218 aac 36523220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 2571032 - 2571133
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||||||| |||||||||| || |||||||||||||||| |||||||||| ||| ||||||| ||||||||  |||| |  ||||| ||||||||    
T  2571032 tcttacatgctaacatttgtatttatatattagttaaaaaatatagtcaaaataaatcatgtgaataatgcacattataaaaatgtgacatgtattttga 2571131  T
Q  101 aa 102  Q
    ||    
T  2571132 aa 2571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 9029599 - 9029680
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||||| |||| |||||| || |||||||||    
T  9029599 tcttacgtgctaatatttgtatttatacattagttaaaaagtatggtcaaagtaagttaagtaaatagtacagattgcaaaa 9029680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4467669 - 4467744
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacatt 76  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||  ||||||||| |||| ||||||||    
T  4467669 tcttacatgctaatatttgtatttatacattagttaaaaagtatagtcaaagcaagtcaagtaaataatgcacatt 4467744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7614727 - 7614664
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtga 64  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  7614727 tcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaaataagtcatgtga 7614664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38721449 - 38721368
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||| ||||||||||||| ||||||| | ||||||| ||||    
T  38721449 tcttacatgctaacatttgtatttatatatttgttaaaaaatatgatcaaaataagtcatgtgaataatacacattgaaaaa 38721368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 27407773 - 27407850
Alignment:
Q  5 acatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    |||||||||||||||||||| || |||||||||||| || ||||||| ||||| | ||||||||| |||| |||||||    
T  27407773 acatgctaatatttgtatttatatattagttaaaaagtagggtcaaagtaagttatgtgaatagttcacactgcaaaa 27407850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 5428661 - 5428588
Alignment:
Q  30 ttagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    ||||||||||| |||||||||  ||||||| |||||||||||||||||| ||| |  ||||| |||||||||||    
T  5428661 ttagttaaaaagtatggtcaacgtaagtcatgtgaatagtgcacattgccaaaatgcgacatgtattttgaaac 5428588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14144607 - 14144663
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    |||||||| ||||||||||||||| || |||||||||||||| |||||||| |||||    
T  14144607 tcttacatactaatatttgtatttatatattagttaaaaaatgtggtcaaagtaagt 14144663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50181172 - 50181128
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatg 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  50181172 tcttacatgctaatatttgtatttatacattaattaaaaaatatg 50181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 32871523 - 32871590
Alignment:
Q  15 atttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||||  | ||||||||||||||||| |||||| ||||||||||||||| ||| ||| |||||    
T  32871523 atttgtatttacatattagttaaaaaatatgatcaaaacaagtcaagtgaatagagcatattacaaaa 32871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 34652208 - 34652299
Alignment:
Q  12 aatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaac 103  Q
    ||||||||||||| ||  ||||||||||||||||||| || ||||||  || |||||| |||||| ||||| |  ||||| |||||||||||    
T  34652208 aatatttgtatttatatgttagttaaaaaatatggtcgaagtaagtcgtgtaaatagtacacattacaaaaatgtgacatgtattttgaaac 34652299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 56297858 - 56297933
Alignment:
Q  7 atgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||| |||||||||| || ||||||||| |||||||||||||| |||| | ||||||| || |||||| ||||    
T  56297858 atgctaacatttgtatttatatattagttaataaatatggtcaaaacaagttatgtgaataatgtacattgtaaaa 56297933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 19903804 - 19903874
Alignment:
Q  5 acatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacat 75  Q
    ||||||||| |||||||||| || ||||||||||| ||||||||||| ||| | | |||||| ||||||||    
T  19903804 acatgctaacatttgtatttatatattagttaaaatatatggtcaaagtaaattatgtgaatcgtgcacat 19903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 25101826 - 25101720
Alignment:
Q  7 atgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacaga 106  Q
    ||||||||||||| |||| ||  ||||||||||| |||||||||||||| |||  | |||| | |||||||||||| |   |||| |||||||||| |||    
T  25101826 atgctaatatttgaatttatatgttagttaaaaagtatggtcaaaataaatcatataaataatacacattgcaaaaatgcaacatgtattttgaaataga 25101727  T
Q  107 ggaaata 113  Q
    || ||||    
T  25101726 gggaata 25101720  T

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Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 29051793 - 29051730
Alignment:
Q  2 cttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaata 67  Q
    |||||||||||||  |||||||| || ||||||||||||||||||||||| ||||| | |||||||    
T  29051793 cttacatgctaat--ttgtatttatatattagttaaaaaatatggtcaaagtaagttatgtgaata 29051730  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 53304535 - 53304481
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    |||||||||||||||| |||||||| ||||||| ||||||||| ||||| |||||    
T  53304535 ttacatgctaatatttatatttgtatattagtttaaaaatatgatcaaagtaagt 53304481  T

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Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 23360273 - 23360189
Alignment:
Q  15 atttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||||||  || ||||||||||||||| ||||||| |||||||  ||||||||||| ||||||||| |  ||||| ||||||||||    
T  23360273 atttgtattcatatattagttaaaaaata-ggtcaaagtaagtca--tgaatagtgcatattgcaaaaatgcgacatgtattttgaaa 23360189  T

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Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 39307806 - 39307706
Alignment:
Q  3 ttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaa 102  Q
    |||||| |||| |||||||||| || |||||||||||| ||   ||||| ||||||| |||||||| | | ||||||||| |  ||||| ||||||||||    
T  39307806 ttacatactaacatttgtatttatatattagttaaaaagtagcatcaaagtaagtcatgtgaatagggtatattgcaaaaatgcgacatgtattttgaaa 39307707  T
Q  103 c 103  Q
    |    
T  39307706 c 39307706  T

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Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 10550538 - 10550429
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaa--aaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 98  Q
    ||||||||||||| |||| ||||| || |||||||||  |||||||||| ||| |||  || |||||||||||| |||| |||| |   ||| |||||||    
T  10550538 tcttacatgctaacatttttatttatatattagttaaaaaaaatatggttaaagtaaaccatgtgaatagtgcatattgtaaaattgcaacagatatttt 10550439  T
Q  99 gaaacagagg 108  Q
     |||||||||    
T  10550438 aaaacagagg 10550429  T

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Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 20875425 - 20875502
Alignment:
Q  29 attagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacaga 106  Q
    ||||||||||||||||||||||| ||| | |  |||||||||||||||  |||| |   |||| ||||||||||||||    
T  20875425 attagttaaaaaatatggtcaaagtaaattatatgaatagtgcacattttaaaattacaacatgtattttgaaacaga 20875502  T

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Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34316632 - 34316536
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatatttt 98  Q
    ||||| ||||||| |||||||||| || ||||||||| || |||| ||||| |||||||  | ||||||||||| || |||| |  ||||||||||||    
T  34316632 tcttatatgctaacatttgtatttatatattagttaacaa-tatgatcaaagtaagtcatataaatagtgcacactgtaaaaatacgacatatatttt 34316536  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 10181149 - 10181213
Alignment:
Q  13 atatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 77  Q
    |||||| | |||||| ||||||  |||||| ||||||||||| || |||| ||||||||||||||    
T  10181149 atatttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaatagtgcacattg 10181213  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 55631827 - 55631883
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagt 57  Q
    ||||| ||| || ||||| | |||||| |||||| ||||||||||||||||||||||    
T  55631827 tcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaaataagt 55631883  T

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Target: scaffold0022 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 100797 - 100904
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||  |||| ||||||||    
T  100797 tcttacacgctaatatttgtatttatacattagttaaaaattatggtcaaagtaagtcaagtgaatagtgcacattgcaaaagttgaacatgtattttga 100896  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  100897 aacggagg 100904  T

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Target: scaffold0003 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 161987 - 162094
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  161987 tcttacatgctaatatttgtatttatacattagttaaaaagtatggtcaatgtaagtcaagtgaatagtgcacattacaaaaattagacatgtattttga 162086  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  162087 aacggagg 162094  T

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Target: scaffold0056 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 71072 - 70972
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||| ||||||||    
T  71072 tcttaaatgctaatatttgtatttatacattagttaaaaa-tatggtcaaaataagtcaagtgaatagtgcatattgcaaaaattggacatgtattttga 70974  T
Q  101 aa 102  Q
    ||    
T  70973 aa 70972  T

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Target: scaffold0295 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13867 - 13974
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||  |||||||| |||||| |    
T  13867 tcttacatgctaatatttatatttatacattagttaaaaagtatggtcaaagtaagtcaagtgaatagtgcacattacaaatattagacatgtattttaa 13966  T
Q  101 aacagagg 108  Q
    ||| ||||    
T  13967 aacggagg 13974  T

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Target: scaffold0295; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 9432 - 9377
Alignment:
Q  53 taagtcaagtgaatagtgcacattgcaaaagttagacatatattttgaaacagagg 108  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  9432 taagtcaagtgaatagtgcacattgcaaaaattagacatgtattttgaaacggagg 9377  T

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Target: scaffold0018 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 67919 - 68021
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttga 100  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||| ||||| || ||||| ||||||||    
T  67919 tcttacatgttaatatttgtatttatacattagttaaaaagtatggtcaaagtaagtcaaatgaatagtgcacatttcaaaaattggacatgtattttga 68018  T
Q  101 aac 103  Q
    |||    
T  68019 aac 68021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4060 - 3990
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgc 71  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||| ||||  | |||||||||||    
T  4060 tcttacatgctaacatttgtatttatatattagttaaaaaatatggtcaaagtaagctatgtgaatagtgc 3990  T

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Target: scaffold0099 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28802 - 28884
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatag-tgcacattgcaaaa 82  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||  | |||||||| ||||||||| ||||    
T  28802 tcttatatgctaatatttgtatttataaattagttaaaaaatatggtcaaagtaagctatgtgaatagttgcacattgtaaaa 28884  T

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Target: scaffold0262 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22892 - 22811
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||||||| |||||||||| || || ||||||||||| |||||||||||||| | ||||||| |||| |||| ||||    
T  22892 tcttacatgctaacatttgtatttatatatgagttaaaaaatgtggtcaaaataagttatgtgaataatgcatattgtaaaa 22811  T

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Target: scaffold0225 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8983 - 9064
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||||||| |||||||||| || |||||||||||||| |||||||| ||||| | ||||||| |||| |||| ||||    
T  8983 tcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 9064  T

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Target: scaffold0029 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 138180 - 138261
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattgcaaaa 82  Q
    ||||||||||||| |||||||||| || |||||||||||||| |||||||| ||||| | ||||||| |||| |||| ||||    
T  138180 tcttacatgctaacatttgtatttatatattagttaaaaaatgtggtcaaagtaagttatgtgaataatgcatattgtaaaa 138261  T

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Target: scaffold0608 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1632 - 1588
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatg 45  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||    
T  1632 tcttacatgctaatatttgtatttatacattaattaaaaaatatg 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 217025 - 217128
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaa-aatatggtcaaaataagtcaagtgaatagtgcacattgcaaaagttagacatatattttg 99  Q
    ||||| ||||||| |||||||||| || |||| |||||| ||||||||||| |||||| | | ||||| ||||||||| |||| |  ||| | |||||||    
T  217025 tcttatatgctaacatttgtatttatatattacttaaaaaaatatggtcaacataagttatgagaatattgcacattgtaaaattgcgacttgtattttg 217124  T
Q  100 aaac 103  Q
    ||||    
T  217125 aaac 217128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36467 - 36543
Alignment:
Q  1 tcttacatgctaatatttgtatttgtacattagttaaaaaatatggtcaaaataagtcaagtgaatagtgcacattg 77  Q
    ||||| ||| |||||||| | |||||| |||| ||||||||||| || |||||| |||| || || |||||||||||    
T  36467 tcttatatgataatatttatctttgtatattaattaaaaaatatagttaaaatatgtcaggtcaaaagtgcacattg 36543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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