View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8354_high_7 (Length: 264)
Name: NF8354_high_7
Description: NF8354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8354_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 3468165 - 3468404
Alignment:
| Q |
16 |
caaagagctccaagggtaacaaacaatagcctctgaccttctcataatccttgaagagtatcctccaagtttccaattcttccctaatgagcaaatatct |
115 |
Q |
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| T |
3468165 |
caaagagctccaagggtaacaaacaatagcctctgaccttctcataatccttgaagagaatcctccaagtttccaattcttccctaatgagcaaatatct |
3468264 |
T |
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| Q |
116 |
tcctccgatgaagtcgaagaaaacgaagaccaagatgaaagctctgatccctccccaagtaactccacagccgcgttgtcgagattctgctcatgcagcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3468265 |
tcctccgatgaagtcgaagaaaacgaagaccaagatgaaagctctgatccctccccaagtaactccacagccgcgttgtcgagattctgctcatgcagcc |
3468364 |
T |
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| Q |
216 |
tctcctttaccagctgaactaaatcctccggtggaccacc |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
3468365 |
tctcctttaccagctgaactaaatcctccggtggaccacc |
3468404 |
T |
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