View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8355_high_7 (Length: 310)
Name: NF8355_high_7
Description: NF8355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8355_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 303
Target Start/End: Original strand, 26886627 - 26886911
Alignment:
| Q |
19 |
ggttaggtgttagaaaagcattgcttgctcgtgacttaaagtggagtcctcttttttcttccaagacgcagaaaaagaaaagtagaaaatcaaatggtgg |
118 |
Q |
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| T |
26886627 |
ggttaggtgttggaaaagcattgcttgctcgtgacttaaagtggagtcctcttttttcttccaagacgcagaaaaagaaaagtagaaaatcaaatggtgg |
26886726 |
T |
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| Q |
119 |
aaccactctcttgttgaaagcctcaaaagtttgcccaacaagattaattgttttcattctcgttaaatatatatatactatgatcagtgaaattatgtgc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |
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| T |
26886727 |
aaccactctcttgttgaaagcctcaaaagtttgcccaacaagataaattgttttcattctggttaaatatatatatactatgatcagtgaaattaagtgc |
26886826 |
T |
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| Q |
219 |
gtaaatgaattgcatcaacacagtcaatggctaggtggttcgcacatcaatacaaatggattgttatattttcttgttcatctca |
303 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26886827 |
gtaaatgaattgcatcaacacagtcaatggctaggtggttcacacatcaatacaaatggattgttatattttcttgttcacctca |
26886911 |
T |
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