View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8355_low_5 (Length: 388)

Name: NF8355_low_5
Description: NF8355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8355_low_5
NF8355_low_5
[»] chr4 (43 HSPs)
chr4 (22-257)||(39447778-39448019)
chr4 (325-371)||(39447664-39447710)
chr4 (116-185)||(38382429-38382499)
chr4 (116-185)||(47181949-47182019)
chr4 (116-185)||(48402090-48402160)
chr4 (116-183)||(26732335-26732403)
chr4 (116-185)||(19473849-19473919)
chr4 (116-185)||(42853685-42853755)
chr4 (116-185)||(53801652-53801722)
chr4 (116-185)||(56363938-56364008)
chr4 (116-180)||(38376383-38376448)
chr4 (116-185)||(31995806-31995878)
chr4 (116-183)||(43175094-43175162)
chr4 (116-183)||(51986152-51986220)
chr4 (151-186)||(49449092-49449127)
chr4 (116-177)||(24045910-24045972)
chr4 (116-185)||(34616669-34616739)
chr4 (116-184)||(19174667-19174736)
chr4 (117-176)||(8279843-8279903)
chr4 (116-179)||(10250408-10250472)
chr4 (119-186)||(15175653-15175721)
chr4 (116-183)||(23369225-23369293)
chr4 (116-183)||(26724865-26724933)
chr4 (116-183)||(39440594-39440662)
chr4 (116-183)||(44539844-44539912)
chr4 (117-179)||(45083086-45083149)
chr4 (119-176)||(3316471-3316529)
chr4 (116-173)||(5233563-5233621)
chr4 (116-185)||(24575744-24575814)
chr4 (116-185)||(27050979-27051049)
chr4 (116-185)||(27371249-27371319)
chr4 (116-185)||(29175333-29175403)
chr4 (120-185)||(37997362-37997428)
chr4 (147-185)||(39478545-39478583)
chr4 (116-185)||(39654932-39655002)
chr4 (147-185)||(56474692-56474730)
chr4 (116-176)||(19232027-19232088)
chr4 (116-180)||(39195170-39195235)
chr4 (116-176)||(39344873-39344933)
chr4 (116-187)||(19748741-19748813)
chr4 (116-187)||(19790993-19791065)
chr4 (116-179)||(26492121-26492185)
chr4 (116-183)||(46213080-46213148)
[»] chr1 (29 HSPs)
chr1 (116-185)||(21401506-21401576)
chr1 (116-185)||(46907303-46907373)
chr1 (116-185)||(3981919-3981989)
chr1 (116-185)||(48470747-48470817)
chr1 (116-183)||(26469469-26469537)
chr1 (116-183)||(27464950-27465018)
chr1 (116-183)||(31088291-31088359)
chr1 (116-183)||(50726141-50726209)
chr1 (116-183)||(15469950-15470017)
chr1 (116-194)||(43775305-43775384)
chr1 (116-183)||(44914464-44914533)
chr1 (117-185)||(37619652-37619721)
chr1 (116-180)||(45121374-45121439)
chr1 (117-185)||(50932412-50932481)
chr1 (116-183)||(649879-649947)
chr1 (116-175)||(30570642-30570702)
chr1 (116-183)||(30735186-30735254)
chr1 (116-183)||(35369810-35369878)
chr1 (116-183)||(45333821-45333889)
chr1 (117-183)||(3851268-3851335)
chr1 (119-177)||(25672458-25672517)
chr1 (116-186)||(44519044-44519115)
chr1 (116-185)||(19055652-19055722)
chr1 (147-185)||(48103288-48103326)
chr1 (117-185)||(26020970-26021039)
chr1 (152-185)||(27533414-27533447)
chr1 (116-183)||(33100918-33100986)
chr1 (116-183)||(37274926-37274994)
chr1 (116-179)||(50149060-50149124)
[»] chr6 (17 HSPs)
chr6 (116-181)||(4820479-4820545)
chr6 (116-185)||(16199558-16199628)
chr6 (116-185)||(18737460-18737530)
chr6 (116-185)||(26595457-26595527)
chr6 (116-183)||(32316821-32316889)
chr6 (116-194)||(30423445-30423524)
chr6 (116-183)||(552903-552971)
chr6 (123-185)||(11014890-11014953)
chr6 (116-185)||(3552048-3552118)
chr6 (116-185)||(5694044-5694114)
chr6 (155-185)||(11612296-11612326)
chr6 (116-185)||(33603173-33603243)
chr6 (116-180)||(1156833-1156898)
chr6 (116-185)||(21968787-21968855)
chr6 (117-185)||(34047495-34047564)
chr6 (116-179)||(15974722-15974786)
chr6 (116-183)||(33430255-33430323)
[»] chr3 (40 HSPs)
chr3 (116-185)||(44383297-44383367)
chr3 (116-183)||(41309227-41309295)
chr3 (116-183)||(46624017-46624085)
chr3 (117-194)||(13348028-13348106)
chr3 (116-185)||(21217620-21217690)
chr3 (116-185)||(23592566-23592636)
chr3 (116-185)||(37056950-37057020)
chr3 (116-183)||(5114188-5114256)
chr3 (116-184)||(23600702-23600771)
chr3 (116-185)||(31157570-31157640)
chr3 (116-185)||(42358531-42358601)
chr3 (116-183)||(27541395-27541463)
chr3 (116-183)||(32924174-32924242)
chr3 (116-183)||(36670907-36670975)
chr3 (116-183)||(52326129-52326197)
chr3 (116-183)||(52939761-52939829)
chr3 (116-178)||(44463472-44463535)
chr3 (116-185)||(11630643-11630713)
chr3 (116-185)||(35376974-35377044)
chr3 (116-185)||(44413288-44413358)
chr3 (116-180)||(19149103-19149168)
chr3 (116-183)||(13735840-13735908)
chr3 (116-179)||(14226598-14226662)
chr3 (116-183)||(16969459-16969527)
chr3 (116-183)||(42356977-42357045)
chr3 (116-183)||(44856063-44856131)
chr3 (116-194)||(24256664-24256743)
chr3 (119-185)||(25641479-25641546)
chr3 (117-183)||(47472439-47472506)
chr3 (116-185)||(8847218-8847287)
chr3 (116-177)||(35201327-35201389)
chr3 (117-182)||(39630511-39630577)
chr3 (116-185)||(46965902-46965972)
chr3 (116-176)||(23155331-23155392)
chr3 (152-185)||(44413852-44413885)
chr3 (144-185)||(49087029-49087070)
chr3 (116-176)||(27511842-27511902)
chr3 (116-179)||(28539633-28539697)
chr3 (116-183)||(38926738-38926806)
chr3 (116-175)||(46965993-46966053)
[»] chr8 (18 HSPs)
chr8 (117-183)||(36251436-36251503)
chr8 (116-185)||(29025368-29025438)
chr8 (116-185)||(36660343-36660413)
chr8 (116-183)||(22719550-22719618)
chr8 (116-183)||(27325868-27325936)
chr8 (116-183)||(37449318-37449386)
chr8 (117-183)||(34639643-34639710)
chr8 (116-185)||(32133431-32133501)
chr8 (117-180)||(12898823-12898887)
chr8 (116-183)||(32501089-32501157)
chr8 (116-183)||(34186717-34186785)
chr8 (116-187)||(36816509-36816581)
chr8 (117-183)||(5277393-5277460)
chr8 (116-177)||(10839375-10839437)
chr8 (116-185)||(13106588-13106658)
chr8 (116-181)||(42768316-42768382)
chr8 (116-176)||(31597066-31597126)
chr8 (116-179)||(37133755-37133819)
[»] chr7 (31 HSPs)
chr7 (116-185)||(46022160-46022230)
chr7 (116-195)||(43159468-43159548)
chr7 (116-185)||(7701652-7701722)
chr7 (116-185)||(42553006-42553076)
chr7 (116-185)||(48062165-48062235)
chr7 (116-185)||(35207609-35207677)
chr7 (116-183)||(24614209-24614277)
chr7 (116-183)||(38956511-38956579)
chr7 (116-182)||(43942743-43942810)
chr7 (116-185)||(40417882-40417952)
chr7 (136-185)||(41189456-41189506)
chr7 (116-176)||(41989633-41989694)
chr7 (119-187)||(28030982-28031049)
chr7 (116-183)||(32529749-32529817)
chr7 (116-187)||(41018770-41018842)
chr7 (117-179)||(3614340-3614403)
chr7 (117-183)||(44895466-44895533)
chr7 (116-185)||(3937016-3937086)
chr7 (116-185)||(9428524-9428594)
chr7 (147-185)||(30064547-30064585)
chr7 (116-177)||(38944913-38944975)
chr7 (151-185)||(41863558-41863592)
chr7 (117-185)||(1504254-1504323)
chr7 (117-185)||(11326009-11326077)
chr7 (119-183)||(22918065-22918130)
chr7 (116-180)||(31445431-31445496)
chr7 (116-180)||(35072255-35072320)
chr7 (116-186)||(38347651-38347723)
chr7 (116-176)||(49043442-49043503)
chr7 (116-187)||(18889920-18889992)
chr7 (116-183)||(40112847-40112915)
[»] chr5 (27 HSPs)
chr5 (116-185)||(17626094-17626164)
chr5 (116-183)||(1671652-1671720)
chr5 (116-187)||(13309989-13310061)
chr5 (116-183)||(28306025-28306093)
chr5 (116-194)||(22972216-22972295)
chr5 (116-185)||(3565192-3565262)
chr5 (116-185)||(8686999-8687069)
chr5 (116-183)||(7287082-7287150)
chr5 (116-183)||(14051208-14051276)
chr5 (116-183)||(18258686-18258754)
chr5 (116-183)||(33037630-33037698)
chr5 (119-176)||(11148624-11148682)
chr5 (116-185)||(15479577-15479647)
chr5 (116-177)||(42475565-42475627)
chr5 (116-180)||(26791137-26791202)
chr5 (116-183)||(36739058-36739126)
chr5 (116-185)||(7552860-7552930)
chr5 (116-185)||(41321363-41321433)
chr5 (152-185)||(1079882-1079915)
chr5 (116-185)||(1274466-1274535)
chr5 (116-180)||(13168635-13168700)
chr5 (116-180)||(39591793-39591858)
chr5 (116-180)||(39592185-39592250)
chr5 (116-183)||(1764334-1764402)
chr5 (117-176)||(4719768-4719828)
chr5 (116-183)||(5168293-5168361)
chr5 (116-179)||(39054701-39054765)
[»] chr2 (28 HSPs)
chr2 (116-185)||(6049238-6049308)
chr2 (116-185)||(22888710-22888780)
chr2 (116-185)||(25270475-25270545)
chr2 (116-185)||(41056640-41056710)
chr2 (116-185)||(3097754-3097824)
chr2 (116-177)||(43076000-43076061)
chr2 (116-179)||(9990805-9990869)
chr2 (116-187)||(27490623-27490695)
chr2 (116-185)||(2076677-2076747)
chr2 (116-185)||(13333063-13333133)
chr2 (116-180)||(18254102-18254167)
chr2 (116-183)||(1248796-1248864)
chr2 (116-183)||(9207700-9207768)
chr2 (116-187)||(14255409-14255481)
chr2 (116-194)||(32477431-32477510)
chr2 (116-185)||(8848590-8848660)
chr2 (116-185)||(39147874-39147944)
chr2 (116-177)||(44050131-44050193)
chr2 (116-185)||(7663960-7664029)
chr2 (117-177)||(29349622-29349683)
chr2 (116-149)||(32701235-32701268)
chr2 (116-179)||(9647246-9647310)
chr2 (147-183)||(19633392-19633428)
chr2 (116-179)||(19642712-19642776)
chr2 (147-183)||(19830293-19830329)
chr2 (116-171)||(21611548-21611604)
chr2 (116-183)||(42421791-42421859)
chr2 (116-183)||(43487489-43487557)
[»] scaffold0184 (1 HSPs)
scaffold0184 (117-185)||(16683-16751)
[»] scaffold0078 (1 HSPs)
scaffold0078 (117-185)||(56093-56161)
[»] scaffold0199 (1 HSPs)
scaffold0199 (116-183)||(8778-8846)
[»] scaffold0056 (1 HSPs)
scaffold0056 (116-183)||(76512-76580)
[»] scaffold0098 (1 HSPs)
scaffold0098 (117-183)||(49405-49472)
[»] scaffold0067 (1 HSPs)
scaffold0067 (152-183)||(35633-35664)


Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 39448019 - 39447778
Alignment:
Q  22 atataaatcgttcttagcaacctaatattgctcattacttttataaataaataaataaatcactattactct-tcttgagttatttgactatttcgtgtt 120  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  39448019 atataaatcgtacttagcaacctaatattgctcattacttttataaataaataaataaatcactattactctctcttgagttatttgattatttcgtgtt 39447920  T
Q  121 atttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaatgaggtatt-----aatccaaaacaaaatattttttgagggaat 215  Q
    ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||    
T  39447919 attcgaacaaccatttatgtgataactctgagataatcaaaattttacaaagaaaatgaggtattgacacaatccaaaacaaaatattttttgagggaat 39447820  T
Q  216 attaattttccaatttccaaataataataatctgaggtgtgt 257  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39447819 attaattttccaatttccaaataataataatctgaggtgtgt 39447778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 371
Target Start/End: Complemental strand, 39447710 - 39447664
Alignment:
Q  325 caaacggcattgtcataataaatattgaatcttgagtctctattcat 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39447710 caaacggcattgtcataataaatattgaatcttgagtctctattcat 39447664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 38382499 - 38382429
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  38382499 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 38382429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 47182019 - 47181949
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  47182019 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 47181949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 48402090 - 48402160
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  48402090 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 48402160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 26732403 - 26732335
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||||||||||||||    
T  26732403 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggta 26732335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 19473849 - 19473919
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||| |  ||||||| ||| |||||| |||||||||||||||||||||||||||||| |||||    
T  19473849 gtgttatttgaagatgcatttatatgacaacttttgagacaatcaaaattttacaaagaaaatgaagtatt 19473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 42853755 - 42853685
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||||||  |||| || ||| |||||||||||||||||| |||||||||||||||||    
T  42853755 gtgttatttgaacatccatttgagtgacaatttttgagacaatcaaaattttataaagaaaatgaggtatt 42853685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 53801652 - 53801722
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||||    
T  53801652 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggtatt 53801722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 56363938 - 56364008
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||  ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  56363938 gtgttatttgaacatccatttacatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 56364008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 38376383 - 38376448
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| | || |||||||||| ||| | |||||||||||||||||||||||||||||    
T  38376383 gtgttatttgaacatctatatatgtgataatttttgtgacaatcaaaattttacaaagaaaatgag 38376448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 31995806 - 31995878
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac----tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||||||||||| | |||||    ||||||||||| ||||||||| |||||||||||||||||    
T  31995806 gtgttatttgaacaaccatttatat-ataacaacttttgagacaattaaaattttagaaagaaaatgaggtatt 31995878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 43175162 - 43175094
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | || |||||||||||||||||| ||||||||||    
T  43175162 gtgttatttgaacatccatatatgtgacaacttttgtgataatcaaaattttacaaaggaaatgaggta 43175094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 51986220 - 51986152
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  51986220 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 51986152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 186
Target Start/End: Original strand, 49449092 - 49449127
Alignment:
Q  151 agacaatcaaaattttacaaagaaaatgaggtatta 186  Q
    ||||||||||||||||||||||||||||||||||||    
T  49449092 agacaatcaaaattttacaaagaaaatgaggtatta 49449127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 24045972 - 24045910
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgag-acaatcaaaattttacaaagaaaat 177  Q
    |||||||||||||||||| |||||||| |||||| || |||||||||||||| |||| |||||    
T  24045972 gtgttatttgaacaaccaattatgtgacaacttttagtacaatcaaaattttgcaaataaaat 24045910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 34616739 - 34616669
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | |||||| ||| |||||| ||||||| |||||||||| |||||||||||| ||||    
T  34616739 gtgttatttgaacatctatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagatatt 34616669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 19174667 - 19174736
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtat 184  Q
    |||||||||||||||||| || ||||| ||| |||||||||| || || |||||||||||||| ||||||    
T  19174667 gtgttatttgaacaaccaattgtgtgacaacttttgagacaaacataaatttacaaagaaaattaggtat 19174736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 8279843 - 8279903
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaa 176  Q
    |||||||||||||||| |||   |||||||||| |||||||||| ||||||||||||||||    
T  8279843 tgttatttgaacaaccgtttgattgataacttttgagacaatcataattttacaaagaaaa 8279903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 10250408 - 10250472
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    |||||||||||||| |||| |||| || |||||| | ||||| ||||||||||||||||||||||    
T  10250408 gtgttatttgaacatccatatatgcgacaacttttgtgacaaccaaaattttacaaagaaaatga 10250472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 15175721 - 15175653
Alignment:
Q  119 ttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatta 186  Q
    ||||||||||| |||| ||||||| |||||| |  |||| ||||||||||||||| |||||||||||||    
T  15175721 ttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtatta 15175653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 23369225 - 23369293
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| ||| |||| ||||| |||||| |||||||| ||||||||||    
T  23369225 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaatcttacaaaggaaatgaggta 23369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 26724865 - 26724933
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||||||| ||||  ||||  |||||||||||||| ||||||||||    
T  26724865 gtgttatttgaacatccatatatgtgataacttttgtaacaactaaaattttacaaaggaaatgaggta 26724933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 39440662 - 39440594
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| ||||||| |||||| | |||||||||||||||| |||| ||||||||||    
T  39440662 gtgttatttgaacattcatatatgtgacaacttttgtgacaatcaaaattttagaaaggaaatgaggta 39440594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 44539912 - 44539844
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  44539912 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 44539844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 45083149 - 45083086
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactttgag-acaatcaaaattttacaaagaaaatga 179  Q
    ||||||||||||| |||| ||||||| |||||| |  ||||||||||||||| |||||||||||    
T  45083149 tgttatttgaacatccatatatgtgacaacttttattacaatcaaaattttataaagaaaatga 45083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 3316529 - 3316471
Alignment:
Q  119 ttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaa 176  Q
    ||||||||||| |||||||  ||| |||||| |||||||||||||||||||||| ||||    
T  3316529 ttatttgaacatccatttagatgacaacttttgagacaatcaaaattttacaaaaaaaa 3316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 5233563 - 5233621
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaaga 173  Q
    |||||||||||||| | |||||||| | |||||| || |||||||||||||||||||||    
T  5233563 gtgttatttgaacatctatttatgtaacaacttttgaaacaatcaaaattttacaaaga 5233621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 24575744 - 24575814
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | || ||||||| |||||| | ||||| |||||||||| |||| ||||||||||||    
T  24575744 gtgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtatt 24575814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 27050979 - 27051049
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||  |||  |||||| |||||| | ||||| ||||||||||||||||||||||| ||||    
T  27050979 gtgttatttgaacattcataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgagatatt 27051049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 27371319 - 27371249
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactt-tgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||||| |||||| ||| ||||| |||||||| || || |||||||||||||  |||||||    
T  27371319 gtgttatttgaacaacaatttatttgagaacttatgagacaaccataaatttacaaagaaaagtaggtatt 27371249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 29175403 - 29175333
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||  ||| ||||||| |||||| | ||||| ||||||||||||||| ||||||| ||||    
T  29175403 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagtaaatgagctatt 29175333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 37997428 - 37997362
Alignment:
Q  120 tatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||| | || |||||||||| ||| |  |||| ||||||||||||||||||||||||||||    
T  37997428 tatttgaacatctatatatgtgataatttttgttacaaccaaaattttacaaagaaaatgaggtatt 37997362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 39478583 - 39478545
Alignment:
Q  147 tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  39478583 tttgtgacaaccaaaattttacaaagaaaatgaggtatt 39478545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 39655002 - 39654932
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||||| |||||  |||||| ||| | ||||| || || ||||||||||||||||||||||    
T  39655002 gtgttatttgaacaactatttagatgataatttttaagacaaccataaatttacaaagaaaatgaggtatt 39654932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 56474692 - 56474730
Alignment:
Q  147 tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  56474692 tttgagacaaccaaaactttacaaagaaaatgaggtatt 56474730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 19232027 - 19232088
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgag-acaatcaaaattttacaaagaaaa 176  Q
    |||||||||||||||||| |||||||| || ||| || |||| ||||||||| |||||||||    
T  19232027 gtgttatttgaacaaccaattatgtgacaatttttagtacaaccaaaattttgcaaagaaaa 19232088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 39195235 - 39195170
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| | |||||| ||| ||| |||| || ||||||| ||||||||||||||||||    
T  39195235 gtgttatttgaacatctatttatatgacaacatttgtgataatcaaagttttacaaagaaaatgag 39195170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 39344873 - 39344933
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaa 176  Q
    |||||||||||||||||||||   ||||||| ||||||||||||| || |||||||||||||    
T  39344873 gtgttatttgaacaaccatttggttgataacttttgagacaatcataa-tttacaaagaaaa 39344933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 19748813 - 19748741
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    |||||||||||||||  ||||  ||||||||||| || ||||||| || |||||||||||||  |||||||||    
T  19748813 gtgttatttgaacaattattttggtgataacttttgaaacaatcataaatttacaaagaaaaataggtattaa 19748741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 19790993 - 19791065
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    |||||||||||||||  ||||  ||||||||||| || ||||||| || |||||||||||||  |||||||||    
T  19790993 gtgttatttgaacaattattttggtgataacttttgaaacaatcataaatttacaaagaaaaataggtattaa 19791065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 26492185 - 26492121
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    |||||||||||||| | || ||||||| || ||| | ||||||||||||||||||||| ||||||    
T  26492185 gtgttatttgaacatctatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatga 26492121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 46213148 - 46213080
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||| | |||| ||||||| |||||| |  |||| ||||||||||||||| ||||||||||    
T  46213148 gtgttatttgaaaatccatatatgtgaaaacttttgtaacaaccaaaattttacaaaggaaatgaggta 46213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 21401576 - 21401506
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  21401576 gtgttatttgaacatccatttatgtgacaacttttgaaacaatcaaaattttacaaagaaaatgaggtatt 21401506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 46907373 - 46907303
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||||||||  || |||||| |||||||||||||||||| |||||||||||||||||    
T  46907373 gtgttatttgaacatccatttatacgacaacttttgagacaatcaaaattttataaagaaaatgaggtatt 46907303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 3981919 - 3981989
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||||  |||||| ||| |||| ||||||||||||||||||||||||||||| ||||    
T  3981919 gtgttatttgaacatccataaatgtgacaacatttgtgacaatcaaaattttacaaagaaaatgagatatt 3981989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 48470817 - 48470747
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| |||||| | ||||||||||||||||||||| ||||||| ||||    
T  48470817 gtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgagatatt 48470747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 26469537 - 26469469
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  26469537 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 26469469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 27464950 - 27465018
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  27464950 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 27465018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 31088359 - 31088291
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| |||||||||||||| |||||||||||    
T  31088359 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaaaaaatgaggta 31088291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 50726141 - 50726209
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| |||||||||| ||| | ||||| ||||||||| ||||||||||||||||    
T  50726141 gtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttgcaaagaaaatgaggta 50726209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 15469950 - 15470017
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| |||||||||| |||| |||||| ||||||||| |||| ||||||||||    
T  15469950 gtgttatttgaacattcatatatgtgataattttgtgacaattaaaattttataaaggaaatgaggta 15470017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 43775384 - 43775305
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtattaatccaaaa 194  Q
    |||||||||||| |  ||| ||||||| |||||| | ||||||||||||||||||||||||||||| |||| || |||||    
T  43775384 gtgttatttgaatattcatatatgtgacaacttttatgacaatcaaaattttacaaagaaaatgagatattgatacaaaa 43775305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 44914464 - 44914533
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt--gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| || |||  | ||||||||||||||||||||| ||||||||||    
T  44914464 gtgttatttgaacatccatatatgtgacaattttttgcgacaatcaaaattttacaaaggaaatgaggta 44914533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 37619721 - 37619652
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactttgag-acaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||| |||| ||||||| |||||| |  |||| ||||||||||||||| ||||||||||||    
T  37619721 tgttatttgaacatccatatatgtgacaacttttattacaaccaaaattttacaaaggaaatgaggtatt 37619652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 45121374 - 45121439
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| |||| ||||||| ||| |||| ||||| ||||||||||||||| |||||||    
T  45121374 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag 45121439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 50932481 - 50932412
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||| |||| ||||||| |||||| |  |||| ||||||||||||||| ||||||||||||    
T  50932481 tgttatttgaacatccatatatgtgacaacttttgttacaaccaaaattttacaaaggaaatgaggtatt 50932412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 649947 - 649879
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||  ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  649947 gtgttatttgaacatccacatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 649879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 30570702 - 30570642
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaa 175  Q
    ||||||||||||||  ||||||| |||||| ||| || |||||||||||||||||||||||    
T  30570702 gtgttatttgaacattcatttatatgataatttttgaaacaatcaaaattttacaaagaaa 30570642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 30735186 - 30735254
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||| | |||| |||||||||| ||| | |||||||||||||||| |||| ||||||||||    
T  30735186 gtgttatttgaatatccatgtatgtgataatttttgtgacaatcaaaattttataaagtaaatgaggta 30735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 35369878 - 35369810
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| ||| |||| ||||| |||||||||| |||| ||||||||||    
T  35369878 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggta 35369810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 45333889 - 45333821
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| | || |||||||||| ||| | |||||| |||||||||||||| ||||||||||    
T  45333889 gtgttatttgaacatctatatatgtgataatttttgtgacaattaaaattttacaaaggaaatgaggta 45333821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 3851335 - 3851268
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||| |||| ||||||| |||||| | ||||| |||||||||| |||| ||||||||||    
T  3851335 tgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttataaaggaaatgaggta 3851268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 25672517 - 25672458
Alignment:
Q  119 ttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaat 177  Q
    |||| |||||||| |||||| |||||||||| || | |||||||||||||||||||||||    
T  25672517 ttatctgaacaactatttatatgataacttttgatataatcaaaattttacaaagaaaat 25672458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 44519044 - 44519115
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatta 186  Q
    ||||||||||||||  ||| ||||||| |||||| | || || ||||||||||||||| |||||||||||||    
T  44519044 gtgttatttgaacattcatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggtatta 44519115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 19055652 - 19055722
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| ||| |||| |||||  |||||||||||||| ||||||| ||||    
T  19055652 gtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgagatatt 19055722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 48103288 - 48103326
Alignment:
Q  147 tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  48103288 tttgagacaaccaaaattttacaaagaaaataaggtatt 48103326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 26020970 - 26021039
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||  ||||||| ||| | |||| |||||||||||||||||||||| |||| ||| ||||    
T  26020970 tgttatttgaacattcatttatatgacatcttttgagacaatcaaaattttacaaaaaaaaagagatatt 26021039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 27533414 - 27533447
Alignment:
Q  152 gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||| ||||||||||||||||||||||||||||    
T  27533414 gacaaccaaaattttacaaagaaaatgaggtatt 27533447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 33100986 - 33100918
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| ||||||| ||| |||| ||||| |||||||||| |||| ||||||||||    
T  33100986 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggta 33100918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 37274926 - 37274994
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| || |  |||||| |||||| | ||||||||||||||| ||||| ||||||||||    
T  37274926 gtgttatttgaacatccttacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggta 37274994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 50149124 - 50149060
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    |||||||||||||| |  ||||| ||| |||||| |  |||||||||||||||||||||||||||    
T  50149124 gtgttatttgaacatcattttatatgacaacttttgcaacaatcaaaattttacaaagaaaatga 50149060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 4820545 - 4820479
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgagg 181  Q
    |||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  4820545 gtgttatttgaacaactatttacatgataacttttgagacaatcaaaattttacaaagaaaatgagg 4820479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 16199628 - 16199558
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  16199628 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 16199558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 18737460 - 18737530
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||||||||||||||||    
T  18737460 gtgttatttgaacatccatgtatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtatt 18737530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 26595527 - 26595457
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| || |||| ||||||||||||||||||||||||||||    
T  26595527 gtgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaagaaaatgaggtatt 26595457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 32316821 - 32316889
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||||||||||||||    
T  32316821 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggta 32316889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 30423445 - 30423524
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtattaatccaaaa 194  Q
    |||||||||||||| | |||||||||||||| ||||| |||||||||  |||| ||||||||||||||||| || |||||    
T  30423445 gtgttatttgaacatctatttatgtgataacttttgatacaatcaaagctttataaagaaaatgaggtattgatacaaaa 30423524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 552971 - 552903
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  552971 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 552903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 11014890 - 11014953
Alignment:
Q  123 ttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||| | |||||| |||||||||| ||||||||||||||||||  ||||||||||||||||    
T  11014890 ttgaacatctatttatatgataacttttgagacaatcaaaattttatgaagaaaatgaggtatt 11014953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 3552048 - 3552118
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||||||||||   ||||||| |||| || ||||| || |||||||||||||| |||||||    
T  3552048 gtgttatttgaacaaccatttggatgataacttttgtgataatcataaatttacaaagaaaataaggtatt 3552118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 5694044 - 5694114
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||| ||||  ||| ||||||| |||||| ||||||| | ||||||||||||| ||||||||||||    
T  5694044 gtgttatttaaacattcatgtatgtgacaacttttgagacaacctaaattttacaaaggaaatgaggtatt 5694114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 185
Target Start/End: Complemental strand, 11612326 - 11612296
Alignment:
Q  155 aatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||||||||||||||||||||    
T  11612326 aatcaaaattttacaaagaaaatgaggtatt 11612296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 33603173 - 33603243
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||| |||||||| |||||||| ||| |||||| | ||   |||||||||||||||||||||||||||||    
T  33603173 gtgttttttgaacatccatttatatgacaacttttaagattgtcaaaattttacaaagaaaatgaggtatt 33603243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 1156898 - 1156833
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| |||| ||| ||||||| |||| |||||||||||||||  |||| |||||||    
T  1156898 gtgttatttgaacatccatatatttgataacttttgtgacaatcaaaattttgtaaaggaaatgag 1156833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 21968787 - 21968855
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||| | |||||||| |||||| ||||||||||  |||| ||||| || |||||||||||||    
T  21968787 gtgttatttgaagatccatttatttgataa-tttgagacaacaaaaaatttacgaataaaatgaggtatt 21968855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 34047564 - 34047495
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||| ||||  |||||| |||||| | ||||| ||||||||||||||||||| ||| ||||    
T  34047564 tgttatttgaacatccataaatgtgacaacttttgtgacaaccaaaattttacaaagaaaaagagatatt 34047495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 15974786 - 15974722
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    |||||||||||||| |||| ||||| | |||||| | ||||| ||||||||||||||| ||||||    
T  15974786 gtgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatga 15974722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 33430255 - 33430323
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||| |||  ||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  33430255 gtgttatttggacattcatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 33430323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 44383367 - 44383297
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| |||||||||||||||||| |||||||||||||||||    
T  44383367 gtgttatttgaacatccatttatatgacaacttttgagacaatcaaaattttataaagaaaatgaggtatt 44383297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 41309295 - 41309227
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| |||| ||||||||| | ||||||||||||||||||||||||||||||||    
T  41309295 gtgttatttgaacatccatatatgcgataacttttgtgacaatcaaaattttacaaagaaaatgaggta 41309227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 46624085 - 46624017
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| ||||  ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  46624085 gtgttatttgaacatccatacatgtgataacttttgtgacaatcaaaattttacaaagaaaatgaggta 46624017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 194
Target Start/End: Original strand, 13348028 - 13348106
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaatccaaaa 194  Q
    ||||||||||||| |||||||| ||| |||||| | ||||| |||||||||||||||||||||||||||| || |||||    
T  13348028 tgttatttgaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtattgatacaaaa 13348106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 21217690 - 21217620
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  21217690 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 21217620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 23592636 - 23592566
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  23592636 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 23592566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 37056950 - 37057020
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| ||| ||||||||||||||||||||||||    
T  37056950 gtgttatttgaacatccatttatatgacaacttttgagacaaccaatattttacaaagaaaatgaggtatt 37057020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 5114256 - 5114188
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| | |||||||||| || ||| | ||||||||||||||||||||||||||||||||    
T  5114256 gtgttatttgaacatctatttatgtgacaatttttatgacaatcaaaattttacaaagaaaatgaggta 5114188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 23600771 - 23600702
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtat 184  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| ||||||||||| ||||    
T  23600771 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgangtat 23600702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 31157570 - 31157640
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactt-tgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||||||||| || ||| ||||||||||||||||| |||| |||||||    
T  31157570 gtgttatttgaacatccatatatgtgataacttctgtgactatcaaaattttacaaaggaaattaggtatt 31157640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 42358531 - 42358601
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| |||||| | ||||||||||||||| ||||| ||||||||||||    
T  42358531 gtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggtatt 42358601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 27541395 - 27541463
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  27541395 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 27541463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 32924174 - 32924242
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  32924174 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 32924242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 36670907 - 36670975
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||||||| |||| ||||| ||||||||||||||  ||||||||||    
T  36670907 gtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaatgaaatgaggta 36670975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 52326197 - 52326129
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||| ||| |||||| | ||||||||||||||||||||| ||||||||||    
T  52326197 gtgttatttgaacatccatatatatgacaacttttatgacaatcaaaattttacaaaggaaatgaggta 52326129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 52939829 - 52939761
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  52939829 gtgttatttgaacatccatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaatgaggta 52939761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 44463535 - 44463472
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatg 178  Q
    |||||||||||||| | | |||| |||||||||| |||| ||||||||||||||||||||||||    
T  44463535 gtgttatttgaacatcaaattatatgataacttttgagataatcaaaattttacaaagaaaatg 44463472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 11630643 - 11630713
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||  ||||||| ||| || ||| |||||||| ||||||||||||||||||||| |||||    
T  11630643 gtgttatttgaacattcatttatatgacaatttttgagacaattaaaattttacaaagaaaatgaagtatt 11630713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 35376974 - 35377044
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||  ||| |||||| | ||||| |||||||||||||||||||||| |||||    
T  35376974 gtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatgatgtatt 35377044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 44413288 - 44413358
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | || ||||||| |||||| | |||||| |||||||||||||| ||||||||||||    
T  44413288 gtgttatttgaacatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtatt 44413358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 19149168 - 19149103
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| |||| ||||||| || ||| | ||||||||||||||||||||| |||||||    
T  19149168 gtgttatttgaacatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgag 19149103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 13735908 - 13735840
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| ||| |||| ||||| ||||||||| ||||| ||||||||||    
T  13735908 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttgcaaaggaaatgaggta 13735840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 14226598 - 14226662
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatga 179  Q
    ||||||||||||||| || |||||| | || ||| | ||||||||||||||||||||||||||||    
T  14226598 gtgttatttgaacaatcaattatgtaacaatttttaagacaatcaaaattttacaaagaaaatga 14226662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 16969459 - 16969527
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| ||| |||| |||||  |||||||||||||| ||||||||||    
T  16969459 gtgttatttgaacatccatatatgtgacaacttttgtgacaactaaaattttacaaaggaaatgaggta 16969527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 42356977 - 42357045
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| || ||| | ||||| ||||||||||||||| ||||||||||    
T  42356977 gtgttatttgaacatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggta 42357045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 44856131 - 44856063
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||  | ||||| ||||||||||||||| ||||||||||    
T  44856131 gtgttatttgaacatccatatatgtgacaacttgtatgacaaccaaaattttacaaaggaaatgaggta 44856063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 24256664 - 24256743
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaatccaaaa 194  Q
    |||||||||||| | | || ||||||| |||||| | |||||| |||||||||||||| |||||||||||| || |||||    
T  24256664 gtgttatttgaaaatctatatatgtgacaacttttgtgacaattaaaattttacaaaggaaatgaggtattgatacaaaa 24256743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 25641479 - 25641546
Alignment:
Q  119 ttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||| |||||||| ||| ||| |||||||||| |||| ||||||| ||||||| |||||||    
T  25641479 ttatttgaacatccatttatatgacaacttttgagacaaccaaagttttacatagaaaataaggtatt 25641546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 47472506 - 47472439
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||| | || ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  47472506 tgttatttgaacatctatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 47472439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 8847287 - 8847218
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||| | |||||| | || ||||||||||||||||| |||||||||||||    
T  8847287 gtgttatttgaacatccatatatgt-acaacttttgtgataatcaaaattttacaaataaaatgaggtatt 8847218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 35201327 - 35201389
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaat 177  Q
    |||||||||||||| |||||||  ||| |||||| |||||||| |||||| ||||||||||||    
T  35201327 gtgttatttgaacatccatttaaatgacaacttttgagacaattaaaattatacaaagaaaat 35201389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 39630511 - 39630577
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggt 182  Q
    ||||||||||||| | |||||| | |||| ||| | |||||||||||||||||||||||||| ||||    
T  39630511 tgttatttgaacatctatttatataataatttttaagacaatcaaaattttacaaagaaaattaggt 39630577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 46965902 - 46965972
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||||| |||| ||||| |||||| | |||||||| || |||||||||||||  |||||||    
T  46965902 gtgttatttgaacaacaatttgtgtgacaacttttaggacaatcataaatttacaaagaaaagtaggtatt 46965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 23155331 - 23155392
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaa 176  Q
    |||||||||||||||| |||||  ||||||| ||| ||| ||||| ||||||||||||||||    
T  23155331 gtgttatttgaacaactatttaattgataacttttaagataatcataattttacaaagaaaa 23155392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 44413852 - 44413885
Alignment:
Q  152 gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||||||||||||||||| ||||    
T  44413852 gacaatcaaaattttacaaagaaaatgagatatt 44413885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 49087029 - 49087070
Alignment:
Q  144 aactttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||| |||| ||||||||| ||||||||||||||||||    
T  49087029 aactttgaaacaaccaaaatttttcaaagaaaatgaggtatt 49087070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 27511902 - 27511842
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaa 176  Q
    |||||||||||||||| |||| ||||| ||||||  ||||| || || |||||||||||||    
T  27511902 gtgttatttgaacaacaatttgtgtgacaacttttggacaaccataaatttacaaagaaaa 27511842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 28539633 - 28539697
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatga 179  Q
    |||||||||||||| |||||||  ||||||| |||| || || ||||||||| ||||||||||||    
T  28539633 gtgttatttgaacatccatttagatgataacttttgtgataaccaaaattttgcaaagaaaatga 28539697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 38926806 - 38926738
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| | || ||||||| |||||| | ||||| ||||||||||||||| |||| |||||    
T  38926806 gtgttatttgaacatctatatatgtgacaactttcgtgacaaccaaaattttacaaaggaaataaggta 38926738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 46965993 - 46966053
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaa 175  Q
    ||||||||||||||||||||| ||||| ||| |||  |||||||| || ||||||||||||    
T  46965993 gtgttatttgaacaaccatttgtgtgacaacttttcggacaatcataaatttacaaagaaa 46966053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 36251503 - 36251436
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  36251503 tgttatttgaacatccatatatgtgataactttcgtgacaatcaaaattttacaaaggaaatgaggta 36251436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 29025438 - 29025368
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||| |||| |||||||| ||| |||||| | ||||| ||||||||||||||||||||||||||||    
T  29025438 gtgttatttaaacatccatttatatgacaacttttgggacaaccaaaattttacaaagaaaatgaggtatt 29025368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 36660343 - 36660413
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||||  ||||||||||||| | |||||||||||||||| ||||||||||| |||||    
T  36660343 gtgttatttgaacatccataaatgtgataacttttgtgacaatcaaaattttataaagaaaatgaagtatt 36660413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 22719618 - 22719550
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | || || ||||||||||||||||||||||||||    
T  22719618 gtgttatttgaacagccatatatgtgacaacttttgtgataaccaaaattttacaaagaaaatgaggta 22719550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 27325936 - 27325868
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | || |||||||||||||||||| ||||||||||    
T  27325936 gtgttatttgaacatccatatatgtgacaactttcgtgataatcaaaattttacaaaggaaatgaggta 27325868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 37449318 - 37449386
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||| | |||| |||||||||||||| | || |||||||||||||||||| ||||||||||    
T  37449318 gtgttatttgaatatccatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggta 37449386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 34639710 - 34639643
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||| |||||||  |||||| ||| |||| ||||||||||||||||| |||||||||||    
T  34639710 tgttatttgaacatccatttacatgataatttttgagagaatcaaaattttacaaataaaatgaggta 34639643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 32133501 - 32133431
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| |||||| ||| |||| || |||||||||||||| ||||| |||||||    
T  32133501 gtgttatttgaacatccatttatatgataaattttgagataaccaaaattttacaaataaaataaggtatt 32133431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 12898823 - 12898887
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgag 180  Q
    ||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| |||||||    
T  12898823 tgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag 12898887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 32501089 - 32501157
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| || ||| | ||||| ||||||||||||||| ||||||||||    
T  32501089 gtgttatttgaacatccatatatgtgagaatttttgtgacaaccaaaattttacaaaggaaatgaggta 32501157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 34186785 - 34186717
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| ||||  |||||| |||||| | ||||||||||||||| ||||| ||||||||||    
T  34186785 gtgttatttgaacatccatacatgtgacaacttttgtgacaatcaaaattttgcaaaggaaatgaggta 34186717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 36816509 - 36816581
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    |||||||||||||| | || ||||||| |||||| | || |||||||||||| |||||||||||| |||||||    
T  36816509 gtgttatttgaacatctatatatgtgacaacttttgtgataatcaaaattttgcaaagaaaatgacgtattaa 36816581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 5277393 - 5277460
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactt-tgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||| ||||  |||||| || || || ||||||||||||||||||||| ||||||||||    
T  5277393 tgttatttgaacatccatacatgtgacaatttatgtgacaatcaaaattttacaaaggaaatgaggta 5277460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 10839375 - 10839437
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaat 177  Q
    |||||||||||||| |||||| | |||||| ||| |||||||  |||||||||||||||||||    
T  10839375 gtgttatttgaacatccatttttatgataatttttgagacaactaaaattttacaaagaaaat 10839437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 13106658 - 13106588
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||||||||||| |||| |||||| |  |||| || || ||||||||||||| ||||||||    
T  13106658 gtgttatttgaacaaccatttaggtgacaacttttataacaaccataaatttacaaagaaaaagaggtatt 13106588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 42768382 - 42768316
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataa-ctttgagacaatcaaaattttacaaagaaaatgagg 181  Q
    |||||||||||||| |||| ||||||||||  |||| |||||  |||||||||||||| ||||||||    
T  42768382 gtgttatttgaacatccatatatgtgataatttttgtgacaactaaaattttacaaaggaaatgagg 42768316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 31597126 - 31597066
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaa 176  Q
    |||||||||||||||||||||   ||||||| ||||||||||||| || |||||||||||||    
T  31597126 gtgttatttgaacaaccatttgattgataacttttgagacaatcataa-tttacaaagaaaa 31597066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 37133755 - 37133819
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    ||||||||| |||| |||||||  ||| |||||| | ||||| ||||||||||||||||||||||    
T  37133755 gtgttattttaacatccatttagatgacaacttttgtgacaaccaaaattttacaaagaaaatga 37133819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 46022160 - 46022230
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  46022160 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 46022230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 43159468 - 43159548
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtattaatccaaaac 195  Q
    |||||||||||||||||||||| |||| |||||||| ||||| || || ||||||||||||| |||||||| || ||||||    
T  43159468 gtgttatttgaacaaccatttaggtgacaactttgatgacaaccataaatttacaaagaaaaagaggtattgatacaaaac 43159548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 7701722 - 7701652
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||| ||||| |||||||||||||||||    
T  7701722 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaagttttataaagaaaatgaggtatt 7701652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 42553076 - 42553006
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||||||||||  ||||||| ||||||| || || |||||||||||||||| ||||||||    
T  42553076 gtgttatttgaacaaccatttaattgataacttttgagaaaaccataattttacaaagaaaaagaggtatt 42553006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 48062235 - 48062165
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| || |||  ||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  48062235 gtgttatttgaacatccgtttgagtgataatttttgagacaatcaaaattttataaagaaaatgaggtatt 48062165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 35207677 - 35207609
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||||||||  ||||| |||||||||| |||||||||||||| ||||||| |||||    
T  35207677 gtgttatttgaacatccatttataggataa-tttgagacaaccaaaattttacaaataaaatgaagtatt 35207609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 24614209 - 24614277
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| |||||||||||||| | || |||||||||||||||||| ||||||||||    
T  24614209 gtgttatttgaacattcatatatgtgataacttttgtgataatcaaaattttacaaaggaaatgaggta 24614277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 38956511 - 38956579
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  38956511 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 38956579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 43942810 - 43942743
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggt 182  Q
    |||||||||||||| |||| |||||||||| ||| | | ||| |||||||||||||||||||||||||    
T  43942810 gtgttatttgaacatccatatatgtgataatttttgtggcaaccaaaattttacaaagaaaatgaggt 43942743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 40417952 - 40417882
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | ||||||  || |||||| ||||||| |||||||||||||||||| |||||||||    
T  40417952 gtgttatttgaacatctatttatacgacaacttttgagacaaccaaaattttacaaagaaagtgaggtatt 40417882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 41189456 - 41189506
Alignment:
Q  136 tatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  41189456 tatgtgataacttttatgacaatcaaaattttacaaaggaaatgaggtatt 41189506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 41989633 - 41989694
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaa 176  Q
    |||||||||||||| |||| ||||||||||| |||| ||||| |||||||||||||| ||||    
T  41989633 gtgttatttgaacatccatatatgtgataacttttgtgacaaccaaaattttacaaaaaaaa 41989694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 28031049 - 28030982
Alignment:
Q  119 ttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    ||||||||||||| ||||   |||||| |||| |||||||| ||||| |||||||||||||||||||||    
T  28031049 ttatttgaacaactatttgaatgataattttgggacaatcataattt-acaaagaaaatgaggtattaa 28030982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 32529749 - 32529817
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||| || |||| ||||||| || ||| | ||||||||||||||||||||| ||||||||||    
T  32529749 gtgttatttgagcatccatatatgtgacaatttttgtgacaatcaaaattttacaaaggaaatgaggta 32529817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 41018842 - 41018770
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    |||||||||||| ||| ||||| |||| |||||| | |||||||| || ||||||||||||| ||||||||||    
T  41018842 gtgttatttgaataactatttaggtgacaacttttatgacaatcataaatttacaaagaaaaagaggtattaa 41018770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 3614340 - 3614403
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatga 179  Q
    ||||||||||||| |||||||| ||| ||| ||||| |||| |||||||||||||||| |||||    
T  3614340 tgttatttgaacatccatttatatgacaacttttgaaacaaccaaaattttacaaagacaatga 3614403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 44895466 - 44895533
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||| |||| ||||| | |||||| | ||||| ||||||||||||||| ||||||||||    
T  44895466 tgttatttgaacatccatatatgtaacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 44895533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 3937016 - 3937086
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||||  |||||| |||||| | ||||| |||||||||| |||| ||||||||||||    
T  3937016 gtgttatttgaacatccatacatgtgacaacttttgtgacaaccaaaattttataaaggaaatgaggtatt 3937086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 9428594 - 9428524
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||   |||||| ||||||| ||| ||| ||||||||||| | |||||||||||||||||    
T  9428594 gtgttatttgaacatttatttatatgataacattttagataatcaaaatttaataaagaaaatgaggtatt 9428524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 185
Target Start/End: Complemental strand, 30064585 - 30064547
Alignment:
Q  147 tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  30064585 tttgagacaattaaaattttacaaagaaaatgatgtatt 30064547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 38944975 - 38944913
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaat 177  Q
    ||||||||| ||||  ||||||| ||| |||||| | ||||||||||||||||||||||||||    
T  38944975 gtgttatttaaacattcatttatatgacaacttttaagacaatcaaaattttacaaagaaaat 38944913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 41863558 - 41863592
Alignment:
Q  151 agacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||||||||| |||||||||||||    
T  41863558 agacaatcaaaattttacaaataaaatgaggtatt 41863592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 1504254 - 1504323
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||||||||  |||||||| |||| |||||||| || |||| ||||||||  |||||||    
T  1504254 tgttatttgaacaaccattttggtgataacttttgggacaatcataaatttataaagaaaagtaggtatt 1504323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 11326077 - 11326009
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||| ||||||||||||| | |||||||| |||||||| | |||||||||||||||| ||| ||||    
T  11326077 tgttatttaaacaaccatttat-taataacttttgagacaattataattttacaaagaaaaagagatatt 11326009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 22918065 - 22918130
Alignment:
Q  119 ttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||| || ||||  |||||| |||||| | ||||||||||||||||||||| ||||||||||    
T  22918065 ttatttgagcatccatacatgtgacaacttttgcgacaatcaaaattttacaaaggaaatgaggta 22918130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 31445496 - 31445431
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| |  ||||| |||||| ||| |  ||||||||||||||||||||||||||||    
T  31445496 gtgttatttgaacatcattttatatgataatttttgcaacaatcaaaattttacaaagaaaatgag 31445431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 35072255 - 35072320
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgag 180  Q
    ||||||| |||||| |||||||| ||| |||||| || |||| |||||||||| ||||||||||||    
T  35072255 gtgttatctgaacatccatttatatgacaacttttgaaacaaccaaaattttataaagaaaatgag 35072320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 38347723 - 38347651
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt--gagacaatcaaaattttacaaagaaaatgaggtatta 186  Q
    ||||||||||||||  ||||||| | |||| |||  |||| ||||||||||||||||||||||| | ||||||    
T  38347723 gtgttatttgaacatacatttatctaataattttttgagataatcaaaattttacaaagaaaataaagtatta 38347651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 49043503 - 49043442
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataa-ctttgagacaatcaaaattttacaaagaaaa 176  Q
    ||||||||||||||||||||| ||||||||  ||||| ||||||| || |||| ||||||||    
T  49043503 gtgttatttgaacaaccatttgtgtgataatttttgacacaatcataaatttataaagaaaa 49043442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 18889920 - 18889992
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgag-acaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    ||||||||| ||||| ||||| ||||| || ||| || ||||||| || |||||||||||||| |||||||||    
T  18889920 gtgttatttcaacaatcatttgtgtgacaatttttaggacaatcataaatttacaaagaaaattaggtattaa 18889992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 40112847 - 40112915
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactt-tgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||| | ||||| |  ||||||||||||||||||||| |||| |||||    
T  40112847 gtgttatttgaacatccatatatgtaacaacttctctgacaatcaaaattttacaaaggaaataaggta 40112915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 17626164 - 17626094
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  17626164 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 17626094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 1671720 - 1671652
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||||||||||||||||||| ||||||||||    
T  1671720 gtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggta 1671652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 13310061 - 13309989
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    |||||||||||||| |||||||  ||| || ||| |||||||||||| |||||||||||||||||||||||||    
T  13310061 gtgttatttgaacatccatttagatgacaatttttgagacaatcaaatttttacaaagaaaatgaggtattaa 13309989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 28306025 - 28306093
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||||||||||||||    
T  28306025 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggta 28306093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 22972295 - 22972216
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaatccaaaa 194  Q
    |||||||||||||| |||||||| | | |||||| |||||||  ||||||||||||||||||| |||||||||| |||||    
T  22972295 gtgttatttgaacatccatttatataacaacttttgagacaactaaaattttacaaagaaaataaggtattaatacaaaa 22972216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 3565262 - 3565192
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||| ||  |||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  3565262 gtgttatttgaacatccacttgagtgacaacttttgagacaaccaaaattttacaaagaaaatgaggtatt 3565192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 8687069 - 8686999
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgaga-caatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||  ||| ||||||| |||||| | | ||||||||||||||||||||||||||||||||    
T  8687069 gtgttatttgaacattcatatatgtgacaacttttataacaatcaaaattttacaaagaaaatgaggtatt 8686999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 7287082 - 7287150
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| ||||||| |||||| | ||||| ||||||||||||||||||||||||||    
T  7287082 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggta 7287150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 14051208 - 14051276
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||  |||| |||| |||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  14051208 gtgttattcaaacatccatatatgtgataacttttgtgacaaccaaaattttacaaagaaaatgaggta 14051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 18258686 - 18258754
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  18258686 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 18258754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 33037698 - 33037630
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  33037698 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 33037630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 11148682 - 11148624
Alignment:
Q  119 ttatttgaacaaccatttatgtgataactttgag-acaatcaaaattttacaaagaaaa 176  Q
    ||||||||||||||| ||||||||||||||| || ||||| |||||||| |||||||||    
T  11148682 ttatttgaacaaccaattatgtgataacttttagtacaattaaaattttgcaaagaaaa 11148624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 15479647 - 15479577
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| ||||  |||||| |||||| | |||||| ||||||||||||| |||||||||||||    
T  15479647 gtgttatttgaacatccataaatgtgacaacttttgtgacaattaaaattttacaaaaaaaatgaggtatt 15479577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 42475565 - 42475627
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactt-tgagacaatcaaaattttacaaagaaaat 177  Q
    |||||||||||||||||||||||||||||| || || ||||||||||| |||| ||| |||||    
T  42475565 gtgttatttgaacaaccatttatgtgataatttatgggacaatcaaaaatttataaaaaaaat 42475627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 26791137 - 26791202
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| |||| ||||||| ||| |||| ||||| ||||||||||||||| |||||||    
T  26791137 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag 26791202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 36739126 - 36739058
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataa-ctttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||||||  |||| ||||| ||||||||||||||  ||||||||||    
T  36739126 gtgttatttgaacatccatatatgtgataatttttgtgacaaccaaaattttacaaaagaaatgaggta 36739058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 7552860 - 7552930
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||  ||| |||||| | ||||| ||||||||| |||||||||||| |||||    
T  7552860 gtgttatttgaacatccatttagatgacaacttttgtgacaaccaaaattttgcaaagaaaatgatgtatt 7552930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 41321433 - 41321363
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||| | |||| ||||||| || ||| | ||||| ||||||||||||||| ||||||||||||    
T  41321433 gtgttatttgaatatccatatatgtgacaatttttgtgacaaccaaaattttacaaaggaaatgaggtatt 41321363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 1079882 - 1079915
Alignment:
Q  152 gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||| |||||||||||||||||||||||||||    
T  1079882 gacaattaaaattttacaaagaaaatgaggtatt 1079915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 1274535 - 1274466
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| |||||| |  ||| |||||||||||||||  |||||| ||||    
T  1274535 gtgttatttgaacatccatatatgtgacaacttttatgcaaccaaaattttacaaagggaatgagatatt 1274466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 13168700 - 13168635
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgag 180  Q
    ||||||||| ||||  ||| ||||||| |||||| | ||||||||||||||||||||| |||||||    
T  13168700 gtgttatttcaacattcatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgag 13168635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 39591858 - 39591793
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| | |||||| ||| ||| |||| ||||| |||| ||||||||||||||||||    
T  39591858 gtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgag 39591793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 39592250 - 39592185
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| | |||||| ||| ||| |||| ||||| |||| ||||||||||||||||||    
T  39592250 gtgttatttgaacatctatttatatgacaacctttgtgacaaccaaagttttacaaagaaaatgag 39592185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 1764402 - 1764334
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| ||||||| ||| |||| ||||| |||||||||| |||| ||||||||||    
T  1764402 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggta 1764334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 4719828 - 4719768
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactttgag-acaatcaaaattttacaaagaaaa 176  Q
    ||||||||||||||||| |||||||| |||||| || |||  ||||||||| |||||||||    
T  4719828 tgttatttgaacaaccaattatgtgacaacttttagtacatccaaaattttgcaaagaaaa 4719768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 5168361 - 5168293
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| ||| ||| |||||| | |||||  |||||||||||||||||||||||||    
T  5168361 gtgttatttgaacattcatatatatgacaacttttgtgacaactaaaattttacaaagaaaatgaggta 5168293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 39054765 - 39054701
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    |||||||||||||| |||||||  ||| |||||| | || |||||||||||| ||||||||||||    
T  39054765 gtgttatttgaacatccatttagatgacaacttttgtgataatcaaaattttgcaaagaaaatga 39054701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 6049238 - 6049308
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| |||||| | ||||||||||||||||||||| ||||||||||||    
T  6049238 gtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtatt 6049308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 22888710 - 22888780
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||| ||||||| |||||| | ||||||||||||||||||||| ||||||||||||    
T  22888710 gtgttatttgaacatccatatatgtgacaacttttgtgacaatcaaaattttacaaaggaaatgaggtatt 22888780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 25270475 - 25270545
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  25270475 gtgttatttgaacatccatttatatgacaactttcgagacaaccaaaattttataaagaaaatgaggtatt 25270545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 41056640 - 41056710
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||||||||    
T  41056640 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgaggtatt 41056710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 3097754 - 3097824
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| |||||||||| |||||||||||| ||||    
T  3097754 gtgttatttgaacatccatttatatgacaacttttgagacaaccaaaattttataaagaaaatgagttatt 3097824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 43076061 - 43076000
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaat 177  Q
    |||||||||||| ||| |||||| ||||||||||||||||| |||||||||| ||| |||||    
T  43076061 gtgttatttgaataacaatttatatgataactttgagacaaccaaaattttataaaaaaaat 43076000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 9990869 - 9990805
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatga 179  Q
    |||||||||||||| |||| ||||||||||| |||| |||||| |||||||||||||| ||||||    
T  9990869 gtgttatttgaacatccatatatgtgataacttttgtgacaattaaaattttacaaaggaaatga 9990805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 27490623 - 27490695
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    |||||||||||||| ||||||   ||| |||||| | |||||||||||||||||||||||||||| |||||||    
T  27490623 gtgttatttgaacatccattttgatgacaacttttgtgacaatcaaaattttacaaagaaaatgatgtattaa 27490695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 2076747 - 2076677
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | ||  |||||| |||||| | ||||| ||||||||||||||||||||||||||||    
T  2076747 gtgttatttgaacatcaatagatgtgacaacttttgtgacaaccaaaattttacaaagaaaatgaggtatt 2076677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 13333063 - 13333133
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | |||||| ||| |||||| ||||||| |||||||||| ||||||||||| |||||    
T  13333063 gtgttatttgaacatcgatttatatgacaacttttgagacaaccaaaattttataaagaaaatgatgtatt 13333133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 18254102 - 18254167
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgag 180  Q
    |||||||||||||| |||| ||||||| ||| |||| ||||| ||||||||||||||| |||||||    
T  18254102 gtgttatttgaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgag 18254167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 1248864 - 1248796
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| ||| |||| || ||| |||||||||||||| ||||||||||    
T  1248864 gtgttatttgaacatccatatatgtgacaacttttgtgataattaaaattttacaaaggaaatgaggta 1248796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 9207768 - 9207700
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| | || |||||||||| ||| | ||||| ||||||||||||||| ||||||||||    
T  9207768 gtgttatttgaacatctatatatgtgataatttttgtgacaaccaaaattttacaaaggaaatgaggta 9207700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 14255481 - 14255409
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggtattaa 187  Q
    |||||||||||||||||||||||| || ||| |||| ||||| || || |||||||||||||  |||||||||    
T  14255481 gtgttatttgaacaaccatttatgcgacaacttttgggacaaccataaatttacaaagaaaagtaggtattaa 14255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 32477510 - 32477431
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtattaatccaaaa 194  Q
    ||||||||||||||  ||| ||||||| |||||| | ||||| |||||||| |||||| |||||||||||| || |||||    
T  32477510 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaatttgacaaaggaaatgaggtattcatacaaaa 32477431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 8848590 - 8848660
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||| | |||||  |||||| ||| | ||||||||||||||| |||||||||||| |||||    
T  8848590 gtgttatttgaacatctatttagatgataatttttgtgacaatcaaaattttgcaaagaaaatgatgtatt 8848660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 39147944 - 39147874
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    |||||||||||||||||||||   ||| |||||| | |||||||| || |||||||| |||||||||||||    
T  39147944 gtgttatttgaacaaccattttaatgacaacttttgggacaatcataaatttacaaaaaaaatgaggtatt 39147874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 44050193 - 44050131
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaat 177  Q
    ||||||||||||||||||||| || || ||| |||||||||| || || ||||||||||||||    
T  44050193 gtgttatttgaacaaccatttgtgcgacaacttttgagacaaccataaatttacaaagaaaat 44050131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 7663960 - 7664029
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttgagacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||||| |||||| |||| || |||  ||||| || || ||||||||||||| ||||||||    
T  7663960 gtgttatttgaacaatcatttaggtgacaattttatgacaaccataaatttacaaagaaaaagaggtatt 7664029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 29349683 - 29349622
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaat 177  Q
    |||||||| |||| |||||||  ||| |||||| | ||||||||||||||||||||||||||    
T  29349683 tgttatttcaacatccatttagatgacaacttttgtgacaatcaaaattttacaaagaaaat 29349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 32701268 - 32701235
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt 149  Q
    ||||||||||||||||||||||| ||||||||||    
T  32701268 gtgttatttgaacaaccatttatatgataacttt 32701235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 9647310 - 9647246
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    ||||||||||||||  ||| |||| ||||||||| | ||||| ||||||||||||||| ||||||    
T  9647310 gtgttatttgaacattcatatatgcgataacttttgtgacaaccaaaattttacaaaggaaatga 9647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 19633428 - 19633392
Alignment:
Q  147 tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  19633428 tttgtgacaatcaaaattttacaaaggaaatgaggta 19633392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 19642776 - 19642712
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatga 179  Q
    ||||||||| |||| |||||||| ||| |||||| ||||||| || |||||| ||||||||||||    
T  19642776 gtgttatttaaacatccatttatatgagaacttttgagacaaccacaattttgcaaagaaaatga 19642712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 19830329 - 19830293
Alignment:
Q  147 tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  19830329 tttgtgacaatcaaaattttacaaaggaaatgaggta 19830293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 21611548 - 21611604
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaa 171  Q
    |||||||||||||| |||| ||||||| |||||| | ||||| ||||||||||||||    
T  21611548 gtgttatttgaacatccatatatgtgacaacttttatgacaaccaaaattttacaaa 21611604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 42421791 - 42421859
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataac-tttgagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||  ||| ||||||| ||| |||| ||||| |||||||||| |||| ||||||||||    
T  42421791 gtgttatttgaacattcatatatgtgacaacttttgtgacaaccaaaattttagaaaggaaatgaggta 42421859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 43487557 - 43487489
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||||||| || ||| |  |||| ||||||||||||||| ||||||||||    
T  43487557 gtgttatttgaacatccatatatgtgacaatttttgtaacaaccaaaattttacaaaggaaatgaggta 43487489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 16683 - 16751
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||| |||||||| ||| |||||| | ||||||||| |||| |||||||||||||||||||    
T  16683 tgttatttgaacatccatttatatgacaacttttaagacaatcaacattt-acaaagaaaatgaggtatt 16751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 56161 - 56093
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggtatt 185  Q
    ||||||||||||| |||||||| ||| |||||| | ||||||||| |||| |||||||||||||||||||    
T  56161 tgttatttgaacatccatttatatgacaacttttaagacaatcaacattt-acaaagaaaatgaggtatt 56093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 8846 - 8778
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataactttga-gacaatcaaaattttacaaagaaaatgaggta 183  Q
    |||||||||||||| |||| ||| ||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  8846 gtgttatttgaacatccatatatctgacaacttttatgacaaccaaaattttacaaaggaaatgaggta 8778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 76512 - 76580
Alignment:
Q  116 gtgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||| |||| |||| ||||||| |||||| | ||||| ||||||||||||||| ||||||||||    
T  76512 gtgttattttaacatccatatatgtgacaacttttgtgacaaccaaaattttacaaaggaaatgaggta 76580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 49472 - 49405
Alignment:
Q  117 tgttatttgaacaaccatttatgtgataacttt-gagacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||| |||| ||||||| |||||| | || || ||||||||||||||| ||||||||||    
T  49472 tgttatttgaacatccatatatgtgacaacttttgtgataaccaaaattttacaaaggaaatgaggta 49405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 183
Target Start/End: Complemental strand, 35664 - 35633
Alignment:
Q  152 gacaatcaaaattttacaaagaaaatgaggta 183  Q
    ||||||||||||||||||||||||||||||||    
T  35664 gacaatcaaaattttacaaagaaaatgaggta 35633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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