View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8357_low_4 (Length: 352)
Name: NF8357_low_4
Description: NF8357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8357_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 35254143 - 35254473
Alignment:
| Q |
1 |
atgttaatattttgtttatttttatgaaaaattgatgcaggaactgatgaaaagaaggccaaggaacttggaccaattatagataaattctatgaaaaag |
100 |
Q |
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| T |
35254143 |
atgttaatattttgtttatttttatgaaaaattgatgcaggaactgatgaaaagaaggccaaggaacttggaccaattatagataaattctatgaaaaag |
35254242 |
T |
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| Q |
101 |
atataaaaaatgcttcaagggacttcccagaattctaccgaggagtatgcgagatagtcgagtactaatcatttttcatattaaaaacttatttaacaaa |
200 |
Q |
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| T |
35254243 |
atataaaaaatgcttcaagggacttcccagaattctaccgaggagtatgcgagatagtcgagtactaatcatttttcatattaaaaacttatttaacaaa |
35254342 |
T |
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| Q |
201 |
catagataaagttcaatgattttatttatttatcacctaggaaactttttctcaattacaactattcatcattctatggcagggaactaaataaaaagtt |
300 |
Q |
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| T |
35254343 |
catagataaagttcaatgattttattcatttatcacctaggaaactttttctcaattacaacttttcatcattctatggcagggaactaaataaaaagtt |
35254442 |
T |
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| Q |
301 |
tggatacactcagttcaaactccccggaacg |
331 |
Q |
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| T |
35254443 |
tggatacactcagttcaaactccccggaacg |
35254473 |
T |
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