View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8357_low_5 (Length: 302)
Name: NF8357_low_5
Description: NF8357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8357_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 1879754 - 1879475
Alignment:
| Q |
1 |
gtttcacaacaatgttatgcatagtaacattttgtatgatctccacaacagcaaaagctagaagcaccaaaagtattagcattgagatgtaaacgactct |
100 |
Q |
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| T |
1879754 |
gtttcacaacaatgttatgcatagtaacattttgtatgatctccacaacagcaaaagctagaagcaccaaaagtattagcattgagatgtaaacgactct |
1879655 |
T |
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| Q |
101 |
aagaaaccttttttggttagtgacatggtgttcttgtggaagagtaattattgagggagcatggttttgtattatctagggtttgagaaagaaaaataaa |
200 |
Q |
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| T |
1879654 |
aagaaaccttttttggttagtgacatggtgttcttgtggaagagtaattattgagggagcatggttttgtattatctagggtttgagaaagaaaaataaa |
1879555 |
T |
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| Q |
201 |
aagatgcaaaagagagctgaatttttgtttggcatgaagactcttagggttgagtatttaacaaggtttggtgtgtagctagat |
284 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1879554 |
aagatgca----agagctgaatttttgtttggcatgaagactcttagggttgagtatttaacaaggtttggtgtgtagctagat |
1879475 |
T |
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