View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8359_high_7 (Length: 278)

Name: NF8359_high_7
Description: NF8359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8359_high_7
NF8359_high_7
[»] chr2 (16 HSPs)
chr2 (1-255)||(40879639-40879891)
chr2 (12-193)||(7586400-7586581)
chr2 (4-194)||(31205799-31205990)
chr2 (12-193)||(8854088-8854269)
chr2 (12-193)||(9073783-9073964)
chr2 (12-193)||(30820480-30820661)
chr2 (12-193)||(12856968-12857149)
chr2 (21-194)||(31186083-31186255)
chr2 (107-194)||(4278258-4278343)
chr2 (12-63)||(8853926-8853977)
chr2 (12-63)||(12856888-12856939)
chr2 (80-121)||(6333067-6333108)
chr2 (14-63)||(9073993-9074042)
chr2 (9-63)||(7586569-7586625)
chr2 (9-63)||(9073952-9074008)
chr2 (9-63)||(30820649-30820705)
[»] chr8 (7 HSPs)
chr8 (1-193)||(30530474-30530666)
chr8 (4-193)||(27359156-27359345)
chr8 (4-193)||(27368513-27368702)
chr8 (4-193)||(17743675-17743864)
chr8 (12-193)||(15055638-15055819)
chr8 (12-193)||(1956150-1956331)
chr8 (31-63)||(15055452-15055484)
[»] scaffold1240 (1 HSPs)
scaffold1240 (1-194)||(557-750)
[»] chr1 (24 HSPs)
chr1 (1-194)||(33166285-33166478)
chr1 (4-194)||(47298395-47298585)
chr1 (1-194)||(38837535-38837725)
chr1 (2-194)||(17677157-17677350)
chr1 (1-194)||(17785344-17785537)
chr1 (21-193)||(51522343-51522515)
chr1 (6-193)||(8470333-8470520)
chr1 (12-193)||(48406419-48406600)
chr1 (12-193)||(48386046-48386227)
chr1 (23-194)||(18318635-18318805)
chr1 (12-193)||(2475990-2476171)
chr1 (12-193)||(31470277-31470458)
chr1 (12-193)||(45241129-45241310)
chr1 (12-63)||(8470261-8470312)
chr1 (6-63)||(8470294-8470351)
chr1 (12-63)||(31469996-31470047)
chr1 (12-63)||(31470158-31470209)
chr1 (12-63)||(31470197-31470248)
chr1 (4-49)||(51522304-51522349)
chr1 (9-63)||(31470114-31470170)
chr1 (9-63)||(31470233-31470289)
chr1 (9-63)||(45241085-45241141)
chr1 (9-63)||(48386215-48386271)
chr1 (9-63)||(48386256-48386312)
[»] chr4 (23 HSPs)
chr4 (1-168)||(34435401-34435568)
chr4 (13-191)||(33606095-33606273)
chr4 (12-193)||(16172718-16172899)
chr4 (12-193)||(8993777-8993958)
chr4 (12-193)||(13112555-13112736)
chr4 (12-193)||(3616115-3616296)
chr4 (12-193)||(46915340-46915521)
chr4 (12-174)||(3531145-3531307)
chr4 (12-193)||(2213146-2213326)
chr4 (45-194)||(36657582-36657730)
chr4 (70-193)||(28446348-28446471)
chr4 (1-193)||(53182276-53182453)
chr4 (1-63)||(33606044-33606106)
chr4 (12-63)||(2213437-2213488)
chr4 (12-63)||(46915632-46915683)
chr4 (12-63)||(3531336-3531387)
chr4 (12-63)||(16173055-16173106)
chr4 (1-33)||(36657577-36657609)
chr4 (12-63)||(16173094-16173145)
chr4 (9-63)||(3531295-3531351)
chr4 (9-63)||(3531457-3531513)
chr4 (9-63)||(8993733-8993789)
chr4 (9-63)||(13112511-13112567)
[»] chr3 (38 HSPs)
chr3 (1-193)||(33750661-33750855)
chr3 (1-194)||(50019097-50019290)
chr3 (1-194)||(26157948-26158141)
chr3 (12-193)||(30416327-30416508)
chr3 (12-193)||(42563001-42563182)
chr3 (12-193)||(10425523-10425704)
chr3 (12-193)||(17468505-17468686)
chr3 (12-193)||(25788571-25788752)
chr3 (12-193)||(42599226-42599407)
chr3 (12-193)||(47146362-47146543)
chr3 (12-193)||(25830528-25830709)
chr3 (12-174)||(6046218-6046380)
chr3 (26-169)||(21227202-21227345)
chr3 (1-114)||(33188901-33189014)
chr3 (12-92)||(51429021-51429100)
chr3 (12-63)||(25788781-25788832)
chr3 (12-63)||(25788928-25788979)
chr3 (12-63)||(25830738-25830789)
chr3 (12-63)||(25830885-25830936)
chr3 (12-63)||(47146036-47146087)
chr3 (12-63)||(47146202-47146253)
chr3 (12-72)||(42599585-42599645)
chr3 (12-63)||(42562769-42562820)
chr3 (12-63)||(42599436-42599487)
chr3 (12-63)||(42599475-42599526)
chr3 (12-63)||(47146323-47146374)
chr3 (13-193)||(21230393-21230574)
chr3 (9-61)||(42562805-42562857)
chr3 (12-63)||(6046450-6046501)
chr3 (12-63)||(6046612-6046663)
chr3 (12-63)||(6046733-6046784)
chr3 (12-63)||(42599555-42599606)
chr3 (9-63)||(17468461-17468517)
chr3 (9-63)||(30416496-30416552)
chr3 (9-63)||(42599395-42599451)
chr3 (9-63)||(42599514-42599570)
chr3 (80-121)||(53722743-53722784)
chr3 (9-62)||(10425816-10425871)
[»] chr7 (15 HSPs)
chr7 (12-193)||(22658938-22659119)
chr7 (9-194)||(32128091-32128276)
chr7 (13-194)||(26814175-26814356)
chr7 (12-193)||(36520521-36520702)
chr7 (12-193)||(22193305-22193486)
chr7 (1-63)||(26814124-26814186)
chr7 (1-63)||(32128300-32128362)
chr7 (12-63)||(22193078-22193129)
chr7 (12-63)||(22193225-22193276)
chr7 (19-63)||(22658622-22658666)
chr7 (12-63)||(22658573-22658624)
chr7 (12-63)||(22658654-22658705)
chr7 (12-63)||(22658693-22658744)
chr7 (11-63)||(22658731-22658783)
chr7 (12-72)||(32128252-32128312)
[»] chr6 (21 HSPs)
chr6 (13-193)||(18641297-18641477)
chr6 (44-193)||(8221233-8221382)
chr6 (12-193)||(34840500-34840681)
chr6 (12-194)||(24917448-24917630)
chr6 (12-193)||(17959161-17959342)
chr6 (12-193)||(633759-633940)
chr6 (12-193)||(6378293-6378474)
chr6 (91-187)||(24114211-24114307)
chr6 (1-63)||(24917618-24917680)
chr6 (12-72)||(8220864-8220924)
chr6 (6-63)||(8220897-8220954)
chr6 (6-63)||(8220936-8220993)
chr6 (12-63)||(633385-633436)
chr6 (12-63)||(633532-633583)
chr6 (12-63)||(633679-633730)
chr6 (12-63)||(6378503-6378554)
chr6 (12-63)||(6378650-6378701)
chr6 (12-63)||(8221148-8221199)
chr6 (1-72)||(18641246-18641317)
chr6 (13-72)||(24114148-24114207)
chr6 (9-63)||(17959330-17959386)
[»] chr5 (14 HSPs)
chr5 (12-193)||(29617392-29617573)
chr5 (12-193)||(30646727-30646908)
chr5 (12-193)||(4579098-4579279)
chr5 (12-193)||(32974221-32974402)
chr5 (12-193)||(40890816-40890997)
chr5 (12-193)||(27944645-27944826)
chr5 (12-63)||(27406303-27406354)
chr5 (12-61)||(4578977-4579026)
chr5 (80-121)||(34918157-34918198)
chr5 (12-63)||(27944483-27944534)
chr5 (12-52)||(27406275-27406315)
chr5 (16-63)||(29617728-29617775)
chr5 (9-63)||(4579054-4579110)
chr5 (10-63)||(4578934-4578989)
[»] scaffold0004 (3 HSPs)
scaffold0004 (16-194)||(104888-105066)
scaffold0004 (1-63)||(104795-104857)
scaffold0004 (12-72)||(104845-104905)
[»] scaffold0658 (1 HSPs)
scaffold0658 (4-122)||(7019-7136)
[»] scaffold0007 (1 HSPs)
scaffold0007 (13-169)||(167228-167384)


Alignment Details
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 40879891 - 40879639
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||| |||  |||||||||||||||||    
T  40879891 actatcaccgaggactagacaacactgacaattattaaagcaaacactggggactagacaacactgacaattttgaccgaa--caaacaaatatttgatt 40879794  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacagattgaa 200  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| || | |||||||||||||||||||||||||    
T  40879793 gaaattaatttcaaaacagctcacgctccaacttttccaacagctcctttttccgatcatcgagatgctctttggaacttaactttacatacagattgaa 40879694  T
Q  201 gaaacaaatctctttcttcaatatgttgtctagtcctttgctgttgtaatatgaa 255  Q
    ||||||||| | |||||||||  |||||||| |||||||||||||||||||||||    
T  40879693 gaaacaaatatgtttcttcaaactgttgtcttgtcctttgctgttgtaatatgaa 40879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 7586581 - 7586400
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  7586581 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 7586482  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  7586481 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 7586400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 31205990 - 31205799
Alignment:
Q  4 atcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaa-catcgacaattttgactgaatacaaacaaatatttgattga 102  Q
    ||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||  ||||||| | || ||||||||||||||||||||||||    
T  31205990 atcactgagaactagacaacactaacaattattaaagcaaacactggggactagacaaacactgacaattattaccgaatacaaacaaatatttgattga 31205891  T
Q  103 aattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||  |||||||||||  ||||| ||| |||||| |||||||||||| ||||||||||  | |||  |||||||| ||||||||||    
T  31205890 aattaattttcaaacagctcacattccaagttttccaacatctcttttttccggtcatcgagatattcttcagaacttaacattacatacag 31205799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 8854088 - 8854269
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||||  |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  8854088 ggactagacaacactgacaatgattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 8854187  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  8854188 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 8854269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 9073964 - 9073783
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  9073964 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 9073865  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  9073864 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 9073783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 30820661 - 30820480
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  30820661 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 30820562  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  30820561 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 30820480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 12856968 - 12857149
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  12856968 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 12857067  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||| ||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  12857068 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 12857149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 31186255 - 31186083
Alignment:
Q  21 aacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttcaaaacagc 120  Q
    ||||||||||||| |||||| |||||||||| |||||||||||  ||||||| | || |||||||||||||||||||||||||||||||||  |||||||    
T  31186255 aacactgacaattattaaagaaaacactggg-actagacaacactgacaattattaccgaatacaaacaaatatttgattgaaattaattttcaaacagc 31186157  T
Q  121 tcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    ||||| ||||| ||| |||||| |||||||||||| ||||||||||| | | || |||||||| ||||||||||    
T  31186156 tcacgttccaagttttccaacatctcttttttccggtcatcgagatgttctccggaacttaacattacatacag 31186083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 4278258 - 4278343
Alignment:
Q  107 aatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||| |||||||||||||||||||| | |||||| || |||||  || ||||||||||||| ||||||||||||||||||||||||    
T  4278258 aatttccaaacagctcacgctccaactcttccaacagctattttt--cggtcatcgagatgctcttcgaaacttaactttacatacag 4278343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 8853926 - 8853977
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  8853926 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 8853977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 12856888 - 12856939
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  12856888 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 12856939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 6333108 - 6333067
Alignment:
Q  80 aatacaaacaaatatttgattgaaattaatttcaaaacagct 121  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  6333108 aatacagacaaatatttgattgaaattaatttccaaacagct 6333067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 9074042 - 9073993
Alignment:
Q  14 actagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||| |||| |||||||||||| || |||||||||||||    
T  9074042 actagacaacactgataattattaaagcaaacagtgaggactagacaaca 9073993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 7586625 - 7586569
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  7586625 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 7586569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 9074008 - 9073952
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  9074008 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 9073952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 30820705 - 30820649
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  30820705 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 30820649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 30530666 - 30530474
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| || ||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  30530666 actatcactgaggactagacaacactgacaattattaaagtaaacgctcgggactagacaacactgacaattttgaccgaatacaaacaaatatttgatt 30530567  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||| || | ||||||||||||||||||    
T  30530566 gaaattaatttcaaaacagctcacgctccaacttttccaacagctcttttttccggtcatcgagatgctctttggaacttaactttacataca 30530474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 27359156 - 27359345
Alignment:
Q  4 atcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaa 103  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  27359156 atcactgaggactagacaacattgacaattattaaagcaaacactggggattagacaacatttacaattttgaccgaatacaaacaaatatttgattgaa 27359255  T
Q  104 attaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| || ||  |||||||||||| |||| |||||||||||| |||||    
T  27359256 attaatttccaaacagctcacgctccaacttttccaacaactctttcttacggccatcgagatgctcttcggaacttaactttagataca 27359345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 27368513 - 27368702
Alignment:
Q  4 atcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaa 103  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  27368513 atcactgaggactagacaacattgacaattattaaagcaaacactggggattagacaacatttacaattttgaccgaatacaaacaaatatttgattgaa 27368612  T
Q  104 attaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| || ||  |||||||||||| |||| |||||||||||| |||||    
T  27368613 attaatttccaaacagctcacgctccaacttttccaacaactctttcttacggccatcgagatgctcttcggaacttaactttagataca 27368702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 17743675 - 17743864
Alignment:
Q  4 atcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaa 103  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||  ||||||| | || ||||||||||||||| |||||||||    
T  17743675 atcactgaggactagacaacattgacaattattaaagcaaacactggggactagacaacactgacaattattaccgaatacaaacaaatagttgattgaa 17743774  T
Q  104 attaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    ||||||||  |||||||||||||||||| ||| |||||  |||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  17743775 attaatttgcaaacagctcacgctccaagttttccaacgtctcttttttccggtcatcgagatgctcttcggaacttaactttacataca 17743864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 15055638 - 15055819
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||    
T  15055638 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 15055737  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| |||| |||||||||||| |||||    
T  15055738 tcaaacagctcacgctccaacttccccaacagctccttcttccggtcatcgagatgctcttcggaacttaactttagataca 15055819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 1956331 - 1956150
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  1956331 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 1956232  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  1956231 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 1956150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 15055452 - 15055484
Alignment:
Q  31 attgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||| ||||||||||||||||    
T  15055452 attgttaaagcaaacagtggggactagacaaca 15055484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold1240
Description:

Target: scaffold1240; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 750 - 557
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||  |||||||||||| |||||||||||| |||||||||    
T  750 actatcattgaggactagacaacactgacaattattaaagcaaacactggggactatacaacactgacaattttgaccgaatacaaacaattatttgatt 651  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||||| |||||||||||||||||| ||| |||||| |||||||| ||| ||||||||||||| |||| |||||||||||||||||||    
T  650 gaaattaatttccaaacagctcacgctccaagttttccaacagctctttttcccggtcatcgagatgctcttcggaacttaactttacatacag 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 8e-70; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33166285 - 33166478
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| | ||| ||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  33166285 actatcactgaggactagacaacactgacaattattaaagtaaaaattggagactagacaacactgacaattttgaccgaatacaaacaaatatttgatt 33166384  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||| |||| || |||| |||||||||||||||||||    
T  33166385 gaaattaatttcaaaacagctcacgctccaacttttccaacagctcttttttccggtcatcaagattctcttcggaacttaactttacatacag 33166478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 47298585 - 47298395
Alignment:
Q  4 atcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaa 103  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||  |||||||||||| ||||||||||||||||| ||||| |    
T  47298585 atcactgaggactagacaacactgacaattattaaagcaaacattggggtctaaacaacactgacaattttgaccgaatacaaacaaatattggattgca 47298486  T
Q  104 attaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| || |||| |||||||||||||||||||    
T  47298485 attaatttcaaaacagctcacgctccaacttttccaacagctcttttttccggtcatcgagatactcttcggaacttaactttacatacag 47298395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 38837725 - 38837535
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||||||| || || ||||||| ||||||||||||| ||||||||||||||||| ||||    
T  38837725 actatcactgagaacttgacaacactgacaattattaaagcaaacactgaggtcttgacaacaccgacaattttgaccgaatacaaacaaatattggatt 38837626  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    | ||||   |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||    
T  38837625 gcaatt---ttcaaaacagctcacgctccaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacag 38837535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 2 - 194
Target Start/End: Complemental strand, 17677350 - 17677157
Alignment:
Q  2 ctatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattg 101  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||||||  || ||||||||||  |||||||||||| ||||||||||||||||| |||||    
T  17677350 ctatcactgaggactagacaacattgacaattattaaaacaaacactaaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattg 17677251  T
Q  102 aaattaatttcaaaacagctcacgctccaactttcccaacaactctttttt-ccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
     |||||||||||||| |||||||||||||||||| |||||| ||||||||| ||| ||||||||||||| |||| |||||||||||||||||||    
T  17677250 caattaatttcaaaatagctcacgctccaacttttccaacagctcttttttcccggtcatcgagatgctcttcggaacttaactttacatacag 17677157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 17785344 - 17785537
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||| | ||||||||||||  |||||||||||| |||||||||||| |||||||||    
T  17785344 actatcactgaggactagacaacactaataattattaaagcaaacactagagactagacaacactgacaattttgaccgaatacaaacaattatttgatt 17785443  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    ||||||||||||||||||||||||||||||| ||| |||  | ||||||||||   ||||||||||||| |||| |||||||||||||||||||    
T  17785444 gaaattaatttcaaaacagctcacgctccaagttttccagtagctcttttttctagtcatcgagatgctcttcggaacttaactttacatacag 17785537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 51522343 - 51522515
Alignment:
Q  21 aacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttcaaaacagc 120  Q
    ||||||||||||| |||||||||||||||  ||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  51522343 aacactgacaattattaaagcaaacactgtagactagacaacactgacaattttgaccgaatacaaacaaatatttgagtgaaattaatttcaaaacagc 51522442  T
Q  121 tcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    ||||||||||||||| |||||| | |||| ||||| ||||||||||||| |||| ||||||||||||||||||    
T  51522443 tcacgctccaacttttccaacagcactttcttccggtcatcgagatgctcttcggaacttaactttacataca 51522515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 6 - 193
Target Start/End: Original strand, 8470333 - 8470520
Alignment:
Q  6 cactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaat 105  Q
    ||||| ||||||||||||||||| |||| |||||||||||| ||||||||||||||||  || |||||||||||||||||||||||||||| ||| ||||    
T  8470333 cactggggactagacaacactgataattattaaagcaaacattggggactagacaacactgataattttgactgaatacaaacaaatatttaattaaaat 8470432  T
Q  106 taatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    ||| ||  |||||||||| |||||||||||||||||| |||||  ||||| ||||||||||||| |||| |||||||||||| |||||    
T  8470433 taacttttaaacagctcaagctccaactttcccaacagctcttacttccggtcatcgagatgctcttcggaacttaactttagataca 8470520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 48406419 - 48406600
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||| || |||||||| | |||||||||||||| ||||||||||||||  || ||||||||||||||| |||||||||||||||| ||||||||||    
T  48406419 ggactagataatactgacaaatattaaagcaaacactcgggactagacaacactgataattttgactgaatataaacaaatatttgattaaaattaattt 48406518  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| |||||||||||||| || || ||||||||||||| |||| |||||||||||| |||||    
T  48406519 tcaaacagctcacgctccaacttccccaacaactctttctttcggtcatcgagatgctcttcggaacttaactttagataca 48406600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 48386227 - 48386046
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  48386227 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 48386128  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  48386127 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 48386046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 18318805 - 18318635
Alignment:
Q  23 cactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttcaaaacagctc 122  Q
    ||||||||||| |||||||||||| ||||||||||||||||  ||||||||| || |||||||||||||||||||||||||||||||||  ||| |||||    
T  18318805 cactgacaattattaaagcaaacagtggggactagacaacactgacaattttaaccgaatacaaacaaatatttgattgaaattaattttcaaatagctc 18318706  T
Q  123 acgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    ||||||||||||| |||| | |||||| ||||| ||||||||||||| |||| ||| |||||||| ||||||    
T  18318705 acgctccaacttttccaatagctctttcttccggtcatcgagatgctcttcggaac-taactttagatacag 18318635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 2476171 - 2475990
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  2476171 ggactagacaacactgacaaatattaaagcaaacagttgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 2476072  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||| ||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  2476071 tcaaacaactcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 2475990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 31470277 - 31470458
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  31470277 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 31470376  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  31470377 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 31470458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 45241129 - 45241310
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  45241129 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 45241228  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  45241229 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 45241310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 8470261 - 8470312
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  8470261 ggactagacaacactgacaattattaaagcaaacactggggactaaacaaca 8470312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 8470294 - 8470351
Alignment:
Q  6 cactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||| |||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  8470294 cactggggactaaacaacactgataattattaaagcaaacactggggactagacaaca 8470351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 31469996 - 31470047
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  31469996 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 31470047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 31470158 - 31470209
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||    
T  31470158 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaaca 31470209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 31470197 - 31470248
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||| |||| |||||||||||| || |||||||||||||    
T  31470197 ggactagacaacactgataattattaaagcaaacagtgaggactagacaaca 31470248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 51522304 - 51522349
Alignment:
Q  4 atcactgaggactagacaacactgacaattgttaaagcaaacactg 49  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  51522304 atcattgaggacgagacaacactgacaattattaaagcaaacactg 51522349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 31470114 - 31470170
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  31470114 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 31470170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 31470233 - 31470289
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  31470233 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 31470289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 45241085 - 45241141
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  45241085 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 45241141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 48386271 - 48386215
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  48386271 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 48386215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 48386312 - 48386256
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| |||||||||||| || |||||||||||||    
T  48386312 tgaggactagacaacactctgataattattaaagcaaacagtgaggactagacaaca 48386256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 34435568 - 34435401
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  34435568 actatcactgaggactagacaacactaacaattattaaagcaaacactagggactagacaacattgacaattttgaccgaatacaaacaaatatttgatt 34435469  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgc 168  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||    
T  34435468 gaaattaatttcaaaatagctcacgctccaacttttccaacaactcttttttccggtcgtcgagatgc 34435401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 33606095 - 33606273
Alignment:
Q  13 gactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttc 112  Q
    |||||||||||||| |||||| |||||| ||||| |||| |||||||||||  |||||||||||| |||||| |||||||||||||||||||||||||||    
T  33606095 gactagacaacactaacaattattaaagtaaacattgggaactagacaacactgacaattttgaccgaataccaacaaatatttgattgaaattaatttc 33606194  T
Q  113 aaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacata 191  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  33606195 aaaacagctcacgctccaactcttccaacaactcttttttccggtcatcgagatgctcttcggaacttaactttacata 33606273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 16172899 - 16172718
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    ||||||| |||||||||||| | |||||||||||||| ||||||||| ||||  || |||||||||||||||||||||||||||||||| ||||||||||    
T  16172899 ggactaggcaacactgacaaatattaaagcaaacactcgggactagataacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 16172800  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    | ||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||||||||||| |||||    
T  16172799 ccaaacagctcacgctccaactttcccaacagctctttcttccggtcatcgagatgctcttcggaacttaactttagataca 16172718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 8993777 - 8993958
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  8993777 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 8993876  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  8993877 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 8993958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 13112555 - 13112736
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  13112555 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 13112654  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  13112655 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 13112736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 3616296 - 3616115
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  3616296 ggactagacaacactgacaaatattaaagcaaacagttgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 3616197  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||| ||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  3616196 tcaaacaactcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 3616115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 46915521 - 46915340
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  46915521 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 46915422  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||| ||||| ||||   |||||||||| |||||    
T  46915421 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgacatgctcttcgtcccttaactttagataca 46915340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 3531307 - 3531145
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | | ||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  3531307 ggactagacaacactgacaaatattaaagcaaacagtcgagactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 3531208  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcg 174  Q
      |||||||||| |||||||||| ||||||| ||| || ||||| ||||||||||||| ||||    
T  3531207 tcaaacagctcatgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcg 3531145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 2213326 - 2213146
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    ||||||||||||| |||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  2213326 ggactagacaaca-tgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 2213228  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  2213227 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 2213146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 36657582 - 36657730
Alignment:
Q  45 cactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttcaaaacagctcacgctccaactttcccaacaac 144  Q
    ||||| |||||||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||| | |||| |    
T  36657582 cactgaggactagacaacactgacaattttgaccaaatacaaacaaatatttgattgaaattaattttcaaacagctcacgctccaagttttctaacagc 36657681  T
Q  145 tcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    | |||||| || |||| |||||||| |||| |||||||||||||||||||    
T  36657682 tatttttt-cggtcattgagatgctcttcggaacttaactttacatacag 36657730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 28446348 - 28446471
Alignment:
Q  70 attttgactgaatacaaacaaatatttgattgaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||||| |||||| |||||| ||||| |||| ||||||||    
T  28446348 attttgactgaatacaaacaaatatttgattgaaattaatttcaaaacaactcaaacaccaacttttccaacatctctttcttccggtcattgagatgct 28446447  T
Q  170 tttcgaaacttaactttacataca 193  Q
     ||||  |||||||||||||||||    
T  28446448 cttcgggacttaactttacataca 28446471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 53182453 - 53182276
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||| ||||  ||||||||||  |||||||||||| ||||||||||||||            
T  53182453 actatcactgaggactagacaatactgacaattattaaagtaaacattgggacctagacaacactgacaattttgaccgaatacaaacaaat-------- 53182362  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
           ||||||||||||||||||| |||| ||| |||||| |||||||||||| ||||| ||||||| |||  |||||||||||| |||||    
T  53182361 -------atttcaaaacagctcacgcaccaagttttccaacagctcttttttccggtcatcaagatgctcttcagaacttaactttagataca 53182276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33606044 - 33606106
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||| ||| ||||||||||||    
T  33606044 actatcactgaggactagacaacactgtcaattattaaagtaaacattggagactagacaaca 33606106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 2213488 - 2213437
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  2213488 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 2213437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 46915683 - 46915632
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  46915683 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 46915632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 3531387 - 3531336
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||||| || |||||||||||||    
T  3531387 ggactagacaacactgacaaatattaaagcaaacagtgaggactagacaaca 3531336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 16173106 - 16173055
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||| |||| |||||||||||| | ||||||||||||||    
T  16173106 ggactagacaacactgataattattaaagcaaacagtcgggactagacaaca 16173055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36657577 - 36657609
Alignment:
Q  1 actatcactgaggactagacaacactgacaatt 33  Q
    |||||||||||||||||||||||||||||||||    
T  36657577 actatcactgaggactagacaacactgacaatt 36657609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 16173145 - 16173094
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||| | || |||||||||||| | ||||||||||||||    
T  16173145 ggactagacaacactgatatttattaaagcaaacagtcgggactagacaaca 16173094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 3531351 - 3531295
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  3531351 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 3531295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 3531513 - 3531457
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| |||||||||||| || |||||||||||||    
T  3531513 tgaggactagacaacactctgataattattaaagcaaacagtgaggactagacaaca 3531457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 8993733 - 8993789
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  8993733 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 8993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 13112511 - 13112567
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  13112511 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 13112567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 33750661 - 33750855
Alignment:
Q  1 actatcactgaggactagacaacactga--caattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttga 98  Q
    |||||||||||||| |||||||||||||  ||||| |||||||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||||    
T  33750661 actatcactgaggattagacaacactgaaacaattattaaagcaaacactggggactagacaacactgacaattttgaccgaatacaaacaattatttga 33750760  T
Q  99 ttgaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    |||||||||||||| ||| |||||||||||||| ||| |||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  33750761 ttgaaattaatttccaaaaagctcacgctccaagttttccaacacctcttttttccggtcatcgagatgctcttcggaacttaactttacataca 33750855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 50019097 - 50019290
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    ||||||||| ||||||| |||| ||| |||||| |||||||||||||||||||||||||||||   ||||||||||  ||||||||||||||||||||||    
T  50019097 actatcactaaggactatacaaaactaacaattattaaagcaaacactggggactagacaacactaacaattttgatcgaatacaaacaaatatttgatt 50019196  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||||||   ||||||||||||| |||| |||||||||||||||||||    
T  50019197 gaaattaatttccaaacagctcacgctccaagttttccaacaactcttttttctagtcatcgagatgctcttcggaacttaactttacatacag 50019290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 26158141 - 26157948
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    |||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||||  |||||||||||| |||||||| ||||||||||| |    
T  26158141 actatcactgaggactagacaacactgacacttattaaagtaaacattggggactagacaacactgacaattttgaccgaatacaaccaaatatttgact 26158042  T
Q  101 gaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||||||||||| ||||||  ||||||   |||||||| ||||||| || ||||| ||||||| |||  |||||||||||||||||||    
T  26158041 gaaattaatttcaaaacaactcacgtaccaactcctccaacaacgctttttttcggtcatcaagatgctcttcagaacttaactttacatacag 26157948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 30416508 - 30416327
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  30416508 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 30416409  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  30416408 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 30416327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 42563001 - 42563182
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||| ||||||||||||||| | ||||||||||||   ||||||||||||||   | ||| |||||||||||||||||||||||||||| ||||||||||    
T  42563001 ggaccagacaacactgacaaatattaaagcaaacagacgggactagacaacactaataatgttgactgaatacaaacaaatatttgattaaaattaattt 42563100  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||||||||||||||| |||||    
T  42563101 tcaaacagctcacgctccaacttccccaacagctccttcttccggtcatcgagatgctcttcgaaacttaactttagataca 42563182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 10425704 - 10425523
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  10425704 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 10425605  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||| | ||||||||||||| ||||   |||||||||| |||||    
T  10425604 tcaaacagctcacgctccaacttccccaacagctcattcttctggtcatcgagatgctcttcgtcccttaactttagataca 10425523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 17468505 - 17468686
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  17468505 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 17468604  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  17468605 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 17468686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 25788752 - 25788571
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  25788752 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 25788653  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  25788652 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 25788571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 42599407 - 42599226
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  42599407 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 42599308  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  42599307 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 42599226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 47146362 - 47146543
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  47146362 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 47146461  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  47146462 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 47146543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 25830709 - 25830528
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  25830709 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 25830610  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||| ||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  25830609 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 25830528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 12 - 174
Target Start/End: Complemental strand, 6046380 - 6046218
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| |  |||||||||||||  || ||| ||||| |||||||||||||||||||||| ||||||||||    
T  6046380 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacactgataatgttgacggaatacaaacaaatatttgattaaaattaattt 6046281  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcg 174  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||    
T  6046280 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcg 6046218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 169
Target Start/End: Original strand, 21227202 - 21227345
Alignment:
Q  26 tgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttcaaaacagctcacg 125  Q
    |||||||| ||||||||||||| ||||||| |||||||  | ||| |||||| ||||||||||||||| |||||||||||||||||| |||||| ||  |    
T  21227202 tgacaattattaaagcaaacaccggggacttgacaacactgccaagtttgaccgaatacaaacaaataattgattgaaattaatttccaaacagttcttg 21227301  T
Q  126 ctccaactttcccaacaactcttttttccgatcatcgagatgct 169  Q
      ||||||||||||||| |||||| ||||| |||||||||||||    
T  21227302 gcccaactttcccaacatctctttcttccggtcatcgagatgct 21227345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33189014 - 33188901
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgatt 100  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||| || ||||||||||   ||||||||||| ||||||||||||||| | ||||    
T  33189014 actatcaccgaggactagacaacactgacaattattaaaacaaacactgaggtctagacaacactaacaattttgaccgaatacaaacaaatactggatt 33188915  T
Q  101 gaaattaatttcaa 114  Q
    | ||||||||||||    
T  33188914 gcaattaatttcaa 33188901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 51429021 - 51429100
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaat 92  Q
    |||||||||||||||||||||| |||||| ||||| |||| |||||||||||| |||||||||||| ||||||||||||||    
T  51429021 ggactagacaacactgacaattattaaagtaaacattgggaactagacaacat-gacaattttgaccgaatacaaacaaat 51429100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 25788832 - 25788781
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  25788832 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 25788781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 25788979 - 25788928
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  25788979 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 25788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 25830789 - 25830738
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  25830789 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 25830738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 25830936 - 25830885
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  25830936 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 25830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 47146036 - 47146087
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  47146036 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 47146087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 47146202 - 47146253
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  47146202 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 47146253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 42599645 - 42599585
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaatt 72  Q
    |||||||||||||||||||| | |||||||||||| | |||||||||||||| ||| ||||    
T  42599645 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacaccgataatt 42599585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 42562769 - 42562820
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||| |||| |||||||||||| || |||||||||||||    
T  42562769 ggactagacaacactgataattattaaagcaaacagtgaggactagacaaca 42562820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 42599487 - 42599436
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||| |||| |||||||||||| || |||||||||||||    
T  42599487 ggactagacaacactgataattattaaagcaaacagtgaggactagacaaca 42599436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 42599526 - 42599475
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||    
T  42599526 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaaca 42599475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 47146323 - 47146374
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  47146323 ggactagacaacactgacaaatattaaagcaaacactacggactagacaaca 47146374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 21230574 - 21230393
Alignment:
Q  13 gactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaa-ttttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||| |||| ||||||||||| ||||||||||||||||||||| |||| ||  | ||| ||| | | |||  ||  |||||| |||||| ||||||||||    
T  21230574 gacttgacatcactgacaattattaaagcaaacactggggacttgacagcactgccaagtttggtcggaactcagtcaaataattgattaaaattaattt 21230475  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    | ||| || ||  |  |||||||| ||||||  ||||| ||| | ||||||||||||| || | |||||| ||||| |||||    
T  21230474 ccaaatagttcttggcccaacttttccaacatatctttcttctggtcatcgagatgctctttggaacttatctttatataca 21230393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 42562805 - 42562857
Alignment:
Q  9 tgaggactagacaacactgacaattgttaaagcaaacactggggactagacaa 61  Q
    |||||||||||||||||||| |||| |||||||||||| || || ||||||||    
T  42562805 tgaggactagacaacactgataattattaaagcaaacaatgagggctagacaa 42562857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 6046501 - 6046450
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||||| |  |||||||||||||    
T  6046501 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaaca 6046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 6046663 - 6046612
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||||| |  |||||||||||||    
T  6046663 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaaca 6046612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 6046784 - 6046733
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||||| |  |||||||||||||    
T  6046784 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaaca 6046733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 42599606 - 42599555
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||| || |||| |||||||||||| || |||||||||||||    
T  42599606 ggactagacaacaccgataattattaaagcaaacagtgaggactagacaaca 42599555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 17468461 - 17468517
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  17468461 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 17468517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 30416552 - 30416496
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  30416552 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 30416496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 42599451 - 42599395
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  42599451 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 42599395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 42599570 - 42599514
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  42599570 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 42599514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 53722743 - 53722784
Alignment:
Q  80 aatacaaacaaatatttgattgaaattaatttcaaaacagct 121  Q
    |||||| |||||||||||||||||||||||||  ||||||||    
T  53722743 aatacagacaaatatttgattgaaattaattttcaaacagct 53722784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 10425871 - 10425816
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaac 62  Q
    ||||||||||||||||||  || |||| |||||||||||| || ||||||||||||    
T  10425871 tgaggactagacaacactctgataattattaaagcaaacagtgaggactagacaac 10425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 22658938 - 22659119
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||||| | ||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||    
T  22658938 ggactagacaacactgacaaatattaaagcaaacactcgagactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 22659037  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||   ||||||| |||||| ||||| ||||||||||||| ||||||||||||||||| |||||    
T  22659038 tcaaacagctcacgctccaacagccccaacagctctttcttccggtcatcgagatgctcttcgaaacttaactttagataca 22659119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 32128276 - 32128091
Alignment:
Q  9 tgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaa 108  Q
    ||||||||||||||||||||||||| |||||  ||||| |||  |||||||||||  | |||||||||| |||||||||||||||||||| |||||||||    
T  32128276 tgaggactagacaacactgacaattattaaaataaacattggaaactagacaacactggcaattttgaccgaatacaaacaaatatttgactgaaattaa 32128177  T
Q  109 tttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||||||||||||||||||   |||||||| |||||||||| ||||| ||||||| |||| |||||||||||||||||||    
T  32128176 tttcaaaacagctcacgctccaactcctccaacaacgcttttttccggtcatcaagatgctcttcggaacttaactttacatacag 32128091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 26814175 - 26814356
Alignment:
Q  13 gactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttc 112  Q
    |||||||||||||| ||| || |||||| ||||| ||||||||||||||||  ||||||||||||  ||||||||||||||||||| |||||||||||||    
T  26814175 gactagacaacactaacacttattaaagtaaacattggggactagacaacactgacaattttgaccaaatacaaacaaatatttgactgaaattaatttc 26814274  T
Q  113 aaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||||||||||||||   |||||| | |||||||||| ||||| ||||||| |||| |||||||||||||||||||    
T  26814275 aaaacagctcacgctccaactcctccaacagcgcttttttccggtcatcaagatgctcttcggaacttaactttacatacag 26814356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 36520521 - 36520702
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  36520521 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 36520620  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  36520621 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 36520702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 22193305 - 22193486
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  22193305 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 22193404  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||| ||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  22193405 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 22193486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26814124 - 26814186
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||||||||||| || |||||| ||||| ||| ||||||||||||    
T  26814124 actatcactgaggactagacaacactgacatttattaaagtaaacattggagactagacaaca 26814186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32128362 - 32128300
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||||||||||| || |||||| ||||| | ||||||||||||||    
T  32128362 actatcactgaggactagacaacactgacatttattaaagtaaacattagggactagacaaca 32128300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 22193078 - 22193129
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  22193078 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 22193129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 22193225 - 22193276
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  22193225 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 22193276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 22658622 - 22658666
Alignment:
Q  19 acaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||    
T  22658622 acaacactgataattattaaagcaaacagtggggactagacaaca 22658666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 22658573 - 22658624
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||| |||| ||||||||||||  | |||||||||||||    
T  22658573 ggactagacaacactgataattattaaagcaaacagggaggactagacaaca 22658624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 22658654 - 22658705
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||| | | ||||||||||||||    
T  22658654 ggactagacaacactgacaaatattaaagcaaatagtcgggactagacaaca 22658705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 22658693 - 22658744
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||| |||| |||||||||||| |  |||||||||||||    
T  22658693 ggactagacaacactgataattattaaagcaaacagtcaggactagacaaca 22658744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22658731 - 22658783
Alignment:
Q  11 aggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||| |||| |||||||||||| | | || |||||||||    
T  22658731 aggactagacaacactgataattattaaagcaaacagtcgtgagtagacaaca 22658783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 32128312 - 32128252
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaatt 72  Q
    ||||||||||||||| ||| || |||||| ||||| || |||||||||||||  |||||||    
T  32128312 ggactagacaacactaacacttattaaagtaaacattgaggactagacaacactgacaatt 32128252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 18641297 - 18641477
Alignment:
Q  13 gactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttc 112  Q
    ||||| |||||| |||||||| |||||  ||||| |||  |||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||    
T  18641297 gactaaacaacattgacaattattaaactaaacattggaaactagacaacactgacaattttgaacgaatacaaacaaatatttgattgaaattaatttc 18641396  T
Q  113 aaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    ||||||||||||||||||||||  |||||||||||||||| || ||||||||||||| |||| |||||||||||| |||||    
T  18641397 aaaacagctcacgctccaacttctccaacaactctttttttcggtcatcgagatgctcttcggaacttaactttatataca 18641477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 193
Target Start/End: Original strand, 8221233 - 8221382
Alignment:
Q  44 acactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttcaaaacagctcacgctccaactttcccaacaa 143  Q
    ||||| ||||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||     
T  8221233 acacttgggactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctccaactttcccaacag 8221332  T
Q  144 ctcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
    |||||| ||||| ||||||||||||| |||| |||||||||||| |||||    
T  8221333 ctctttcttccggtcatcgagatgctcttcggaacttaactttagataca 8221382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 34840500 - 34840681
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  34840500 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 34840599  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  34840600 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 34840681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 194
Target Start/End: Complemental strand, 24917630 - 24917448
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||| ||||| |||||| ||||| |||  |||||||||||  ||||||||||||  || |||||||||||||||| ||||||||||||    
T  24917630 ggactagacaacactggcaattattaaagtaaacattggatactagacaacactgacaattttgaccaaacacaaacaaatatttgactgaaattaattt 24917531  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    |||||||||| || ||||||||   |||||| |||||||||||| ||||| ||||||| |||| |||||||||||||||||||    
T  24917530 caaaacagcttactctccaactcctccaacagctcttttttccggtcatcaagatgctcttcggaacttaactttacatacag 24917448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 17959342 - 17959161
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  17959342 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 17959243  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  17959242 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 17959161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 633759 - 633940
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  633759 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 633858  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||| ||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  633859 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 633940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 6378474 - 6378293
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  6378474 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 6378375  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||| ||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  6378374 tcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 6378293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 24114211 - 24114307
Alignment:
Q  91 atatttgattgaaattaatttcaaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaacttta 187  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| |||| ||||||||||||    
T  24114211 atatttgattgaaattaattttcaaacagctcacgctccaacttttccaacaactctttcttccggtcatcgagatgctcttcggaacttaacttta 24114307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24917680 - 24917618
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  24917680 actatcactgaggactagacaacactgacaattattaaagtaaacattggggactagacaaca 24917618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 8220864 - 8220924
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaatt 72  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  8220864 ggactagacaacactgacaattattaaagcaaacactggggactagacaacactgacaatt 8220924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 8220897 - 8220954
Alignment:
Q  6 cactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  8220897 cactggggactagacaacactgacaattactaaagcaaacactggggactagacaaca 8220954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 8220936 - 8220993
Alignment:
Q  6 cactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  8220936 cactggggactagacaacactgataattattaaagcaaacactggggactagagaaca 8220993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 633385 - 633436
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  633385 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 633532 - 633583
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  633532 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 633583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 633679 - 633730
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  633679 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 633730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 6378554 - 6378503
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  6378554 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 6378503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 6378701 - 6378650
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  6378701 ggactagacaacactgacaattattaaagtaaacattggggactagacaaca 6378650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 8221148 - 8221199
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  8221148 ggactaaacaacactgacaattattaaagcaaacactggggattagacaaca 8221199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18641246 - 18641317
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaatt 72  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||| ||  ||||| ||||||| |||||||    
T  18641246 actatcactgaggactatacaacactgataattattaaagtaaacattgaagactaaacaacattgacaatt 18641317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 24114148 - 24114207
Alignment:
Q  13 gactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaatt 72  Q
    |||| |||| ||||||||||| |||||||||||  ||||||||||||||||  |||||||    
T  24114148 gacttgacaccactgacaattattaaagcaaactgtggggactagacaacactgacaatt 24114207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 17959386 - 17959330
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  17959386 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 17959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 29617573 - 29617392
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || |||||||||| ||||||||||||||||||||| ||||||||||    
T  29617573 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataattttgactaaatacaaacaaatatttgattaaaattaattt 29617474  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| |||||| || || ||||||||||||| |||  |||||||||||| |||||    
T  29617473 tcaaacagctcacgctccaacttccccaacagctctttctttcggtcatcgagatgctcttcagaacttaactttagataca 29617392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 30646908 - 30646727
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||||| | ||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||    
T  30646908 ggactagacaacactgacaaatattaaagcaaacactcgtgactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattt 30646809  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||| |||||| ||||||  | || ||||||||||||| |||  |||||||||||| |||||    
T  30646808 tcaaacagctcacgctccaacttttccaacagctctttcattcggtcatcgagatgctcttcataacttaactttagataca 30646727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 4579098 - 4579279
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  4579098 ggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 4579197  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      |||||||||||||||||||||  |||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  4579198 tcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 4579279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 32974402 - 32974221
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||| | | ||||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  32974402 ggactagacaacactgacaaatattaaagcaaatagtcgggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 32974303  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  32974302 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 32974221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 40890816 - 40890997
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| |  |||||||||||||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  40890816 ggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 40890915  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  40890916 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 40890997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 27944645 - 27944826
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaattt 111  Q
    |||||||||||||||||||| | |||||||||||| | || |||||||| ||  || ||| |||||||||||||||||||||||||||| ||||||||||    
T  27944645 ggactagacaacactgacaaatattaaagcaaacagtcggaactagacagcactgataatgttgactgaatacaaacaaatatttgattaaaattaattt 27944744  T
Q  112 caaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacataca 193  Q
      ||||||||||||||||||||| ||||||| ||| || ||||| ||||||||||||| ||||   |||||||||| |||||    
T  27944745 tcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaactttagataca 27944826  T

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Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 27406354 - 27406303
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  27406354 ggactagacaacactgacaattattaaagcaaacaccagggactagacaaca 27406303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 4578977 - 4579026
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaa 61  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  4578977 ggactagacaacactgacaaatattaaagcaaacattggggactagacaa 4579026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 34918198 - 34918157
Alignment:
Q  80 aatacaaacaaatatttgattgaaattaatttcaaaacagct 121  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  34918198 aatacaaacaaatatttgattgaaattaatttccaaacagct 34918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 27944483 - 27944534
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||| | |||||||||||| || |||||||||||||    
T  27944483 ggactagacaacactgacaaatattaaagcaaacagtgaggactagacaaca 27944534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 27406315 - 27406275
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactgggg 52  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  27406315 ggactagacaacactgataattattaaagcaaacactgggg 27406275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 29617775 - 29617728
Alignment:
Q  16 tagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||| |||| |||||||||||| | ||||||||||||||    
T  29617775 tagacaacactgataattattaaagcaaacagtcgggactagacaaca 29617728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 4579054 - 4579110
Alignment:
Q  9 tgaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    ||||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  4579054 tgaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 4579110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 4578934 - 4578989
Alignment:
Q  10 gaggactagacaacact--gacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||  || |||| ||||||||||||||  |||||||||||||    
T  4578934 gaggactagacaacactctgataattattaaagcaaacactacggactagacaaca 4578989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 99; Significance: 6e-49; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 104888 - 105066
Alignment:
Q  16 tagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttcaaa 115  Q
    |||||||||||||||||| |||||  ||||| |||| |||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  104888 tagacaacactgacaattattaaaataaacattgggaactagacaacactgacaattttgaccgaatacaaacaaatatttgactgaaattaatttcaaa 104987  T
Q  116 acagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgcttttcgaaacttaactttacatacag 194  Q
    ||||||||| ||||||||   |||||  | |||||||||| ||||| ||||||| |||| |||||||||||||||||||    
T  104988 acagctcacactccaactcctccaaccgcgcttttttccggtcatcaagatgctcttcggaacttaactttacatacag 105066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 104795 - 104857
Alignment:
Q  1 actatcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaaca 63  Q
    |||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||||    
T  104795 actatcactgaggactagacaacactgacatttattaaagtaaacattggggactagacaaca 104857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 104845 - 104905
Alignment:
Q  12 ggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaatt 72  Q
    ||||||||||||||| ||| || |||||| ||||| |||||| |||||||||  |||||||    
T  104845 ggactagacaacactaacacttattaaagtaaacattggggattagacaacactgacaatt 104905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 7136 - 7019
Alignment:
Q  4 atcactgaggactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaa 103  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||| | |||||||||| ||||||||||||    
T  7136 atcactgaggactatacaacattgacaattattaaagcaaacactggggactagacaacactgacaattttgaccg-atacaaacaactatttgattgaa 7038  T
Q  104 attaatttcaaaacagctc 122  Q
    ||||||||| |||||||||    
T  7037 attaatttccaaacagctc 7019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 167384 - 167228
Alignment:
Q  13 gactagacaacactgacaattgttaaagcaaacactggggactagacaacatcgacaattttgactgaatacaaacaaatatttgattgaaattaatttc 112  Q
    |||| |||| ||||||||||| ||| ||||||||||||||||| ||||  |  ||||| |||||| |||| |||||||||| ||||||||||||||||||    
T  167384 gacttgacatcactgacaattattagagcaaacactggggacttgacactactgacaagtttgaccgaatgcaaacaaatacttgattgaaattaatttc 167285  T
Q  113 aaaacagctcacgctccaactttcccaacaactcttttttccgatcatcgagatgct 169  Q
     ||||| |||  |  |||||||| ||||||||| ||| ||||| ||||||| |||||    
T  167284 caaacaactcttggcccaacttttccaacaactttttcttccggtcatcgaaatgct 167228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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