View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8360_low_6 (Length: 312)
Name: NF8360_low_6
Description: NF8360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8360_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 29 - 225
Target Start/End: Complemental strand, 6149112 - 6148916
Alignment:
| Q |
29 |
taatactttaacaaaatttattttaattaagggtttgcctaacttaactcgtacctttgttcttatctcgttctacttggaaagaaaatatgtaaaaagg |
128 |
Q |
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| T |
6149112 |
taatactttaacaaaatttattttaattaagggtttgtctaacttaactcgtacctttgttcttatctcgttctacttagaaagaaaaaatgtaaaaagg |
6149013 |
T |
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| Q |
129 |
aaatttaaatagacaaaatatttttagggctttaacttcgcaccccacatacacccttctgttttcctctaagtatattatgttcaaggtttgtttg |
225 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6149012 |
aaatttaaatagacaaaatatttttagggctttaacttcacaccccacatacacccttctgttttcctctaagtatattatgttcaaggtttgtttg |
6148916 |
T |
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