View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8361_high_4 (Length: 309)
Name: NF8361_high_4
Description: NF8361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8361_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 22 - 295
Target Start/End: Original strand, 43837606 - 43837881
Alignment:
| Q |
22 |
atgaatataaacaaccaagtaaatatatgttttgacagagaaattttgaatctggaatcaacgacttcaccatatgtctctttctttaatcattttttaa |
121 |
Q |
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| T |
43837606 |
atgaatataaacaaccaagtaaatatatgttttgacagagaaattttgaatctggaatcaacgacttcaccatatgtctctttctttaatcattttttaa |
43837705 |
T |
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| Q |
122 |
aatatgtctagattcacattcacatattaaaaca--atttttcagaacaaaaaataattatcgaacaagtcaggggcctattcaacaaattttcataatt |
219 |
Q |
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| T |
43837706 |
aatatgtctagattcacattcacatattaaaacacaatttttcagaacaaaaaataattatcgaacaagtcaggggcctattcaacaaattttcataatt |
43837805 |
T |
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| Q |
220 |
ctaaaattttcacatctaccctcctacgtcatcatatgttcttcctaaaacattccggcgacggcgtcacaaaatt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43837806 |
ctaaaattttcacatctaccctcctacgtcatcatatgttcttcctaaaacattccggcgacggcgtcacaaaatt |
43837881 |
T |
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