View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8361_low_12 (Length: 252)

Name: NF8361_low_12
Description: NF8361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8361_low_12
NF8361_low_12
[»] chr4 (34 HSPs)
chr4 (1-172)||(21052904-21053071)
chr4 (176-242)||(4511828-4511894)
chr4 (176-230)||(39241304-39241358)
chr4 (176-233)||(50980605-50980662)
chr4 (176-236)||(28676149-28676209)
chr4 (176-236)||(30778261-30778321)
chr4 (163-242)||(27384177-27384256)
chr4 (176-230)||(42490923-42490977)
chr4 (201-242)||(46912790-46912831)
chr4 (176-236)||(1868890-1868950)
chr4 (181-233)||(19232133-19232185)
chr4 (174-230)||(48326553-48326609)
chr4 (203-242)||(1688419-1688458)
chr4 (203-242)||(17363271-17363310)
chr4 (203-242)||(36081840-36081879)
chr4 (176-230)||(5386387-5386441)
chr4 (176-242)||(7795028-7795094)
chr4 (176-242)||(21766561-21766627)
chr4 (176-210)||(36812437-36812471)
chr4 (176-210)||(43358616-43358650)
chr4 (202-236)||(44272807-44272841)
chr4 (176-230)||(46173553-46173607)
chr4 (176-230)||(46686248-46686301)
chr4 (176-210)||(55595952-55595986)
chr4 (176-229)||(4974114-4974167)
chr4 (203-236)||(18874919-18874952)
chr4 (205-242)||(35332749-35332786)
chr4 (203-236)||(46566970-46567003)
chr4 (174-235)||(49241961-49242022)
chr4 (176-236)||(15515798-15515858)
chr4 (176-228)||(24310526-24310578)
chr4 (176-236)||(29407034-29407094)
chr4 (176-236)||(32365664-32365724)
chr4 (181-233)||(51930846-51930898)
[»] chr2 (32 HSPs)
chr2 (181-233)||(10472147-10472199)
chr2 (176-231)||(4138187-4138242)
chr2 (176-230)||(7121393-7121447)
chr2 (176-242)||(25801804-25801870)
chr2 (173-232)||(44422978-44423037)
chr2 (176-242)||(38598340-38598406)
chr2 (176-242)||(45202123-45202189)
chr2 (176-233)||(8482232-8482289)
chr2 (176-241)||(29795450-29795515)
chr2 (176-233)||(40700210-40700267)
chr2 (176-236)||(38600828-38600888)
chr2 (201-236)||(5191691-5191726)
chr2 (176-227)||(37966370-37966421)
chr2 (203-242)||(42554817-42554856)
chr2 (203-242)||(42665803-42665842)
chr2 (176-210)||(14797684-14797718)
chr2 (176-242)||(15141476-15141542)
chr2 (176-230)||(17264078-17264132)
chr2 (176-230)||(22353178-22353232)
chr2 (176-230)||(24727429-24727483)
chr2 (176-230)||(28013970-28014024)
chr2 (176-210)||(39737720-39737754)
chr2 (201-242)||(546376-546417)
chr2 (203-236)||(4842517-4842550)
chr2 (203-236)||(8555288-8555321)
chr2 (203-236)||(15283247-15283280)
chr2 (203-236)||(23358576-23358609)
chr2 (203-236)||(30856848-30856881)
chr2 (176-229)||(42081051-42081104)
chr2 (176-236)||(4263861-4263920)
chr2 (181-233)||(6842557-6842609)
chr2 (177-233)||(40496365-40496421)
[»] chr7 (31 HSPs)
chr7 (176-242)||(6822524-6822590)
chr7 (176-242)||(43213322-43213388)
chr7 (176-242)||(2469706-2469772)
chr7 (176-236)||(27688651-27688711)
chr7 (176-236)||(38547287-38547347)
chr7 (176-230)||(8459617-8459671)
chr7 (176-230)||(22330634-22330688)
chr7 (176-242)||(24380712-24380778)
chr7 (176-242)||(30391162-30391228)
chr7 (176-230)||(37351993-37352047)
chr7 (176-230)||(41985103-41985157)
chr7 (202-242)||(7295491-7295531)
chr7 (176-231)||(237027-237082)
chr7 (201-236)||(5724077-5724112)
chr7 (173-236)||(21839130-21839193)
chr7 (203-242)||(36186867-36186906)
chr7 (176-210)||(2756963-2756997)
chr7 (176-210)||(9055270-9055304)
chr7 (182-236)||(10619696-10619750)
chr7 (202-236)||(18925994-18926028)
chr7 (176-242)||(23848092-23848158)
chr7 (176-242)||(27866528-27866594)
chr7 (176-242)||(33465030-33465096)
chr7 (176-242)||(37856156-37856222)
chr7 (176-242)||(39875800-39875866)
chr7 (176-242)||(40108138-40108204)
chr7 (203-236)||(4971331-4971364)
chr7 (173-242)||(30180518-30180587)
chr7 (203-236)||(43079629-43079662)
chr7 (176-233)||(43444638-43444695)
chr7 (176-228)||(31785476-31785528)
[»] chr8 (36 HSPs)
chr8 (176-236)||(37392125-37392185)
chr8 (176-233)||(1370285-1370342)
chr8 (176-236)||(45081401-45081461)
chr8 (176-230)||(7325729-7325783)
chr8 (176-233)||(1796499-1796556)
chr8 (176-233)||(41639799-41639856)
chr8 (203-242)||(12959979-12960018)
chr8 (176-231)||(14710895-14710950)
chr8 (203-242)||(27630938-27630977)
chr8 (203-242)||(38174224-38174263)
chr8 (176-230)||(5502374-5502428)
chr8 (176-230)||(5740788-5740842)
chr8 (176-242)||(6243048-6243114)
chr8 (176-210)||(7376509-7376543)
chr8 (176-246)||(9047057-9047127)
chr8 (176-210)||(9048350-9048384)
chr8 (174-236)||(11138908-11138970)
chr8 (176-234)||(11789813-11789871)
chr8 (203-241)||(12659093-12659131)
chr8 (176-242)||(13924025-13924091)
chr8 (176-242)||(14233635-14233701)
chr8 (176-242)||(23265345-23265411)
chr8 (176-242)||(25430660-25430726)
chr8 (176-242)||(43590708-43590774)
chr8 (176-230)||(44103779-44103833)
chr8 (176-233)||(157070-157127)
chr8 (203-236)||(6004985-6005018)
chr8 (201-242)||(7279917-7279958)
chr8 (203-236)||(12045650-12045683)
chr8 (203-236)||(14548820-14548853)
chr8 (176-233)||(29107998-29108055)
chr8 (173-230)||(42768125-42768182)
chr8 (202-235)||(44380612-44380645)
chr8 (202-242)||(3893389-3893429)
chr8 (201-233)||(24798357-24798389)
chr8 (176-228)||(39211056-39211108)
[»] chr5 (22 HSPs)
chr5 (176-236)||(13734357-13734417)
chr5 (176-242)||(8725413-8725479)
chr5 (176-242)||(33910079-33910145)
chr5 (176-230)||(14206403-14206457)
chr5 (176-230)||(33567226-33567280)
chr5 (176-233)||(6865787-6865844)
chr5 (201-242)||(31024996-31025037)
chr5 (182-242)||(2117615-2117675)
chr5 (203-242)||(2456067-2456106)
chr5 (203-242)||(19824218-19824257)
chr5 (176-242)||(12203161-12203227)
chr5 (176-210)||(32873183-32873217)
chr5 (176-230)||(39458671-39458725)
chr5 (203-236)||(91256-91289)
chr5 (176-233)||(372720-372777)
chr5 (173-230)||(21210830-21210887)
chr5 (177-230)||(29227721-29227774)
chr5 (202-242)||(3960160-3960200)
chr5 (178-242)||(7080546-7080610)
chr5 (204-236)||(9636155-9636187)
chr5 (176-236)||(41210510-41210570)
chr5 (202-242)||(41460156-41460196)
[»] chr1 (38 HSPs)
chr1 (176-236)||(40596051-40596111)
chr1 (176-242)||(40139129-40139195)
chr1 (176-236)||(41507191-41507251)
chr1 (176-231)||(49453494-49453549)
chr1 (176-230)||(5477166-5477220)
chr1 (176-230)||(14983787-14983841)
chr1 (176-242)||(27687510-27687576)
chr1 (176-242)||(29264018-29264084)
chr1 (176-230)||(45272163-45272217)
chr1 (176-242)||(48325769-48325835)
chr1 (176-242)||(49589965-49590031)
chr1 (176-242)||(50460703-50460769)
chr1 (176-241)||(3826807-3826872)
chr1 (176-236)||(5975551-5975611)
chr1 (176-236)||(43612077-43612137)
chr1 (203-242)||(30196755-30196794)
chr1 (201-236)||(30530396-30530431)
chr1 (203-242)||(39815387-39815426)
chr1 (203-242)||(49596276-49596315)
chr1 (176-210)||(3606128-3606162)
chr1 (176-242)||(11121495-11121561)
chr1 (176-210)||(27810281-27810315)
chr1 (176-230)||(46903484-46903538)
chr1 (176-242)||(47059881-47059947)
chr1 (176-230)||(51571418-51571472)
chr1 (176-233)||(17652643-17652700)
chr1 (203-236)||(27352671-27352704)
chr1 (203-236)||(29254063-29254096)
chr1 (176-233)||(34818044-34818101)
chr1 (203-236)||(34941917-34941950)
chr1 (203-236)||(36930751-36930784)
chr1 (176-233)||(8959221-8959274)
chr1 (202-242)||(23554791-23554831)
chr1 (176-236)||(29293962-29294022)
chr1 (176-236)||(30414878-30414938)
chr1 (176-236)||(44950418-44950478)
chr1 (176-236)||(50797794-50797854)
chr1 (173-236)||(51571351-51571412)
[»] scaffold0054 (1 HSPs)
scaffold0054 (176-242)||(31591-31657)
[»] chr3 (24 HSPs)
chr3 (176-242)||(3484773-3484839)
chr3 (176-242)||(29846882-29846948)
chr3 (173-242)||(31997813-31997882)
chr3 (176-242)||(29057662-29057728)
chr3 (176-230)||(35554118-35554172)
chr3 (173-233)||(34662017-34662078)
chr3 (202-242)||(1834546-1834586)
chr3 (176-228)||(47683804-47683856)
chr3 (203-242)||(22153905-22153944)
chr3 (203-242)||(43900748-43900787)
chr3 (176-230)||(23868981-23869035)
chr3 (176-242)||(23906978-23907044)
chr3 (176-242)||(35368625-35368691)
chr3 (202-236)||(40785696-40785730)
chr3 (176-230)||(43169756-43169810)
chr3 (176-230)||(46952952-46953006)
chr3 (176-230)||(48490516-48490570)
chr3 (176-242)||(50745563-50745629)
chr3 (203-236)||(7211-7244)
chr3 (203-236)||(1901923-1901956)
chr3 (203-236)||(1911369-1911402)
chr3 (203-236)||(8868913-8868946)
chr3 (203-236)||(36869834-36869867)
chr3 (203-236)||(45150263-45150296)
[»] scaffold0155 (1 HSPs)
scaffold0155 (176-227)||(3277-3328)
[»] chr6 (18 HSPs)
chr6 (176-242)||(31517171-31517237)
chr6 (176-233)||(2060633-2060690)
chr6 (181-242)||(2717980-2718041)
chr6 (201-242)||(7693354-7693395)
chr6 (201-242)||(30253304-30253345)
chr6 (176-233)||(32644626-32644683)
chr6 (201-236)||(18792429-18792464)
chr6 (203-242)||(23633314-23633353)
chr6 (176-242)||(1196061-1196127)
chr6 (203-236)||(14094952-14094985)
chr6 (176-233)||(16352160-16352217)
chr6 (203-236)||(16743263-16743296)
chr6 (203-236)||(32729930-32729963)
chr6 (176-236)||(12177580-12177640)
chr6 (176-236)||(12441541-12441601)
chr6 (176-233)||(16328699-16328758)
chr6 (201-233)||(16337922-16337954)
chr6 (201-233)||(16368046-16368078)
[»] scaffold0511 (1 HSPs)
scaffold0511 (201-236)||(11677-11712)
[»] scaffold0154 (1 HSPs)
scaffold0154 (203-242)||(4356-4395)
[»] scaffold0014 (1 HSPs)
scaffold0014 (203-236)||(199307-199340)
[»] scaffold0009 (1 HSPs)
scaffold0009 (173-210)||(263729-263766)
[»] scaffold0115 (1 HSPs)
scaffold0115 (201-241)||(15180-15220)


Alignment Details
Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 21052904 - 21053071
Alignment:
Q  1 ttgcttttatttcttttaattgaaaagtcaattagagaggatccgttccctactcttcgcaattcgcacataatttgtgtgattttcgccttctagattt 100  Q
    ||||||||||||||||||||||||||||| |||||    |||||||||||||||||| ||||||||||| |||||| ||||||||||||||| |||||||    
T  21052904 ttgcttttatttcttttaattgaaaagtctattag----gatccgttccctactctttgcaattcgcacttaatttatgtgattttcgccttttagattt 21052999  T
Q  101 ctaaaactaatattttcttttggaatacttgacccaatctcattagttgaatttattgagagtttatcttcc 172  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21053000 ctaaaactaatatttttttttggaatacttgacccaatctcattagttgaatttattgagagtttatcttcc 21053071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 4511828 - 4511894
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||| |||||    
T  4511828 aaatgatatttgtataaccattttatgacaactttctctctcatactcacattatattcttattctc 4511894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 39241358 - 39241304
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||||||| | |||||||||| |||||||||||||||||    
T  39241358 aaatgatatttgtacaaccaatttgtgacaactttctctctcatactcacattat 39241304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 50980605 - 50980662
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| || || ||||||||||| |||| ||||||||||||||||||||    
T  50980605 aaatgatatttgtacaatcattttctaacaaccttctctctcatactcacattatatt 50980662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 28676209 - 28676149
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| ||| | |||||||||| | |||||||||||||||||||||    
T  28676209 aaatgatatttgtacaaccattttgtgacaactttctctttcatactcacattatattctt 28676149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 30778321 - 30778261
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| | ||||||| | |||||||||| |||||||||||||||||| ||||    
T  30778321 aaatgatatttgtacagccaatttgtgacaactttctctctcatactcacattatactctt 30778261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 27384177 - 27384256
Alignment:
Q  163 tttatcttccgaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||| | || |||||||||||||| ||||| ||| | |||||||||| ||||||| ||| ||||||||||| |||||    
T  27384177 tttatctacagagaaatgatatttgtacaaccattttattacaactttctctctcatattcatattatattcttattctc 27384256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 42490923 - 42490977
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  42490923 aaatgatatttgtacaaccactttttgacaactttctctctcatactcacattat 42490977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 46912831 - 46912790
Alignment:
Q  201 taacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  46912831 taacaactttctctctcatactcacattatattcttattctc 46912790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 1868950 - 1868890
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||||||||||| |||||    
T  1868950 aaatgatatttgtacaaccatttttgtacaactttctatctcatactcacattatcttctt 1868890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 19232185 - 19232133
Alignment:
Q  181 atatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    ||||||||| ||||||||| | ||||| |||| ||||||||||||||||||||    
T  19232185 atatttgtacaaccaatttttgacaaccttctctctcatactcacattatatt 19232133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 48326553 - 48326609
Alignment:
Q  174 aaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||||| ||||| ||| | |||||||| | |||||||||||||||||    
T  48326553 aaaaatgatatttgtacaaccactttgtgacaactttttctctcatactcacattat 48326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 1688458 - 1688419
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  1688458 acaactttctctctcatactcacattatattcttattctc 1688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 17363271 - 17363310
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  17363271 acaactttctctctcatactcacattatattcttattctc 17363310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 36081840 - 36081879
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  36081840 acaactttctctctcatactcacattatattcttattctc 36081879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 5386387 - 5386441
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||| | ||||| ||| | |||||||||| |||||||||||||||||    
T  5386387 aaatgatatttgaacaaccattttttgacaactttctctctcatactcacattat 5386441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 7795028 - 7795094
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||| ||||||| ||||| |||||    
T  7795028 aaatgatatttgtacaaccatttttgtacaactttctttctcatacttacattatcttcttattctc 7795094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 21766561 - 21766627
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||||||||| || |||   ||||| |||| ||||||||||||||||| ||||| |||||    
T  21766561 aaatgatatttgtataatcatttttgtacaaccttctctctcatactcacattatcttcttattctc 21766627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 36812471 - 36812437
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  36812471 aaatgatatttgtacaaccaatttctaacaacttt 36812437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 43358616 - 43358650
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  43358616 aaatgatatttgtacaaccaatttctaacaacttt 43358650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 44272841 - 44272807
Alignment:
Q  202 aacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  44272841 aacaactttctctctcatactcacattatattctt 44272807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 46173553 - 46173607
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||| ||||||||||||    
T  46173553 aaatgatatttgtacaaccactttgtgacaactttctctctcgtactcacattat 46173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 46686248 - 46686301
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| || ||||||||| |||||||||||||||||    
T  46686248 aaatgatatttgtacaaccattttgta-caactttctctctcatactcacattat 46686301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 55595952 - 55595986
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  55595952 aaatgatatttgtacaaccaatttctaacaacttt 55595986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 4974114 - 4974167
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacatta 229  Q
    |||||||||||||| ||| | ||| |||||||||||| |||||||| |||||||    
T  4974114 aaatgatatttgtacaactattttttaacaactttctctctcatacccacatta 4974167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 18874952 - 18874919
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  18874952 acaactttctctctcatactcacattatattctt 18874919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 35332749 - 35332786
Alignment:
Q  205 aactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  35332749 aactttctctctcatactcacattatattcttattctc 35332786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 46566970 - 46567003
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  46566970 acaactttctctctcatactcacattatattctt 46567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 49242022 - 49241961
Alignment:
Q  174 aaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattct 235  Q
    |||||||||||||| |||| || ||| | |||||||||| | ||||||||||| ||||||||    
T  49242022 aaaaatgatatttgaataatcattttgtcacaactttctctttcatactcacaatatattct 49241961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 15515798 - 15515858
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| ||| ||| | ||| | |||||||||| ||||||||||||||||| |||||    
T  15515798 aaatgatattggtacaactattttatgacaactttctctctcatactcacattatcttctt 15515858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 24310578 - 24310526
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacatt 228  Q
    |||||||||||||| ||||| |||   |||||||||| |||||||||||||||    
T  24310578 aaatgatatttgtacaaccatttttgtacaactttctctctcatactcacatt 24310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 29407094 - 29407034
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| |||||||||| ||| | | ||||||||||| ||| |||||    
T  29407094 aaatgatatttgtacaaccattttctaacaagtttttctttcatactcacaatattttctt 29407034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 32365724 - 32365664
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||| |||||| || |||||    
T  32365724 aaatgatatttgtacaaccattttgtgacaactttctctctcatattcacatgatgttctt 32365664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 51930846 - 51930898
Alignment:
Q  181 atatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    ||||||||| ||||||||| | ||||  |||| ||||||||||||||||||||    
T  51930846 atatttgtacaaccaatttttgacaaaattctctctcatactcacattatatt 51930898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 10472199 - 10472147
Alignment:
Q  181 atatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  10472199 atatttgtataaccattttctaacaactttctctctcatactcacattatatt 10472147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 4138242 - 4138187
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattata 231  Q
    |||||||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  4138242 aaatgatatttgtataactattttctaacaactttctctctcatactcacattata 4138187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 7121393 - 7121447
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  7121393 aaatgatatttgtataaccattttgtaacaactttctctctcatactcacattat 7121447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 25801870 - 25801804
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||||||| | |||||||| | |||||||||||||||||| |||| |||||    
T  25801870 aaatgatatttgtacaaccaatttgtgacaactttatctctcatactcacattatactcttattctc 25801804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 44422978 - 44423037
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatat 232  Q
    ||||||||||||||||| ||||| ||| |||||||||||| | ||||||| |||||||||    
T  44422978 gaaaaatgatatttgtacaaccactttttaacaactttctctttcatactgacattatat 44423037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 38598406 - 38598340
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||||||||| |||   ||||| |||| ||||||||||||||||| ||||| |||||    
T  38598406 aaatgatatttgtataaccatttttgtacaaccttctctctcatactcacattatcttcttattctc 38598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 45202189 - 45202123
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||| ||||||||| ||||| |||||    
T  45202189 aaatgatatttgtacaaccatttttttacaactttctctctcatattcacattatcttcttattctc 45202123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 8482289 - 8482232
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||| ||||||||||||    
T  8482289 aaatgatatttgtacaaccactttatgacaactttctctctcatattcacattatatt 8482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 29795450 - 29795515
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttct 241  Q
    |||||||||||||| ||||| ||| | |||||||||| || ||||||||||||||| |||| ||||    
T  29795450 aaatgatatttgtacaaccattttgtgacaactttctctcacatactcacattatactcttattct 29795515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 40700210 - 40700267
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    ||||| |||||||| ||| | ||| |||||||||||| ||||||||||||||||||||    
T  40700210 aaatggtatttgtacaactattttataacaactttctctctcatactcacattatatt 40700267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 38600828 - 38600888
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||| |||| | ||| ||| | |||||||||| |||||||||||||||||||||||    
T  38600828 aaatgatatatgtacatccattttttgacaactttctctctcatactcacattatattctt 38600888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 5191726 - 5191691
Alignment:
Q  201 taacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  5191726 taacaactttctctctcatactcacattatattctt 5191691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 37966370 - 37966421
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacat 227  Q
    |||||||||||||| ||||||||| | |||||||| | ||||||||||||||    
T  37966370 aaatgatatttgtacaaccaatttgtgacaactttttctctcatactcacat 37966421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 42554817 - 42554856
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  42554817 acaactttctctctcatactcacattatattcttattctc 42554856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 42665842 - 42665803
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  42665842 acaactttctctctcatactcacattatattcttattctc 42665803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 14797718 - 14797684
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  14797718 aaatgatatttgtacaaccaatttctaacaacttt 14797684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 15141476 - 15141542
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| | | | ||| | |||||||||| |||||||||||||||||| |||| |||||    
T  15141476 aaatgatatttgtacatctattttatgacaactttctctctcatactcacattatactcttattctc 15141542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 17264132 - 17264078
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    ||||||||||| |||||||| ||| | |||||||||| ||||||||||| |||||    
T  17264132 aaatgatatttatataaccattttatgacaactttctttctcatactcatattat 17264078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 22353232 - 22353178
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| || || ||| | |||||||||| |||||||||||||||||    
T  22353232 aaatgatatttgtacaatcattttgtgacaactttctttctcatactcacattat 22353178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 24727429 - 24727483
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| |||   |||||||||| |||||||||||||||||    
T  24727429 aaatgatatttgtacaaccattttggtacaactttctctctcatactcacattat 24727483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 28013970 - 28014024
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||| ||||||||| ||||||||| | |||||||||| |||||||||||| ||||    
T  28013970 aaattatatttgtacaaccaatttttgacaactttctctctcatactcacgttat 28014024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 39737754 - 39737720
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  39737754 aaatgatatttgtacaaccaatttctaacaacttt 39737720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 546417 - 546376
Alignment:
Q  201 taacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||| |||||||||||||||||||| || |||||    
T  546417 taacaactttctctctcatactcacattatatttttattctc 546376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 4842550 - 4842517
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  4842550 acaactttctctctcatactcacattatattctt 4842517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 8555321 - 8555288
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  8555321 acaactttctctctcatactcacattatattctt 8555288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 15283280 - 15283247
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  15283280 acaactttctctctcatactcacattatattctt 15283247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 23358609 - 23358576
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  23358609 acaactttctctctcatactcacattatattctt 23358576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 30856848 - 30856881
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  30856848 acaactttctctctcatactcacattatattctt 30856881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 42081051 - 42081104
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacatta 229  Q
    |||||||||||||| | ||| ||| | |||||||||| ||||||||||||||||    
T  42081051 aaatgatatttgtacagccactttttgacaactttctctctcatactcacatta 42081104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 4263920 - 4263861
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||| | ||| | |||||||||| | |||||||||||||||||||||    
T  4263920 aaatgatatttgtacaac-attttttgacaactttctctttcatactcacattatattctt 4263861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 6842609 - 6842557
Alignment:
Q  181 atatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||| || ||||| ||| |||||| ||||| ||||||||||||||||||||    
T  6842609 atatttatacaaccattttataacaattttctctctcatactcacattatatt 6842557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 40496365 - 40496421
Alignment:
Q  177 aatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||| |||| | ||| ||| | |||||||||| ||||||||||||||||||||    
T  40496365 aatgatatatgtaaatccactttttgacaactttctctctcatactcacattatatt 40496421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 6822590 - 6822524
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||||||||||||| | ||||||||||||||||| ||||| |||||    
T  6822590 aaatgatatttgtacaaccattttctaacaactttttctctcatactcacattatcttcttattctc 6822524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 43213322 - 43213388
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||| |||| |||||    
T  43213322 aaatgatatttgtacaaccactttctaacaattttctctctcatactcacattatactcttattctc 43213388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 2469706 - 2469772
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||||||||||| ||||||| |||||    
T  2469706 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattgtattcttattctc 2469772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 27688651 - 27688711
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||||||| | | | | |||||||||| |||||||||||||||||||||||    
T  27688651 aaatgatatttgtataactactatgtgacaactttctttctcatactcacattatattctt 27688711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 38547347 - 38547287
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||| | ||| | |||||||||| |||||||||||||||||||||||    
T  38547347 aaatgatatttgtacaactattttttgacaactttctttctcatactcacattatattctt 38547287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 8459617 - 8459671
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| |||||||||||| ||||||||||| |||||    
T  8459617 aaatgatatttgtacaaccactttttaacaactttctctctcatactcatattat 8459671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 22330688 - 22330634
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  22330688 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattat 22330634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 24380778 - 24380712
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  24380778 aaatgatatttgtacaaccatttttatacaactttctttctcatactcacattatcttcttattctc 24380712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 30391162 - 30391228
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||||||| | ||| | |||||||| | ||| ||||||||||||||||||| |||||    
T  30391162 aaatgatatttgtataactattttattacaactttttctcttatactcacattatattcttattctc 30391228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 37352047 - 37351993
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  37352047 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattat 37351993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 41985157 - 41985103
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| || |||||| | |||||||||| |||||||||||||||||    
T  41985157 aaatgatatttgtacaatcaatttgtgacaactttctctctcatactcacattat 41985103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 7295491 - 7295531
Alignment:
Q  202 aacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  7295491 aacaactttctctctcatactcacattatattcttattctc 7295531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 237027 - 237082
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattata 231  Q
    |||||||||||||| || |||||| | |||||||| | ||||||||||||||||||    
T  237027 aaatgatatttgtacaatcaatttgtgacaactttatctctcatactcacattata 237082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 5724077 - 5724112
Alignment:
Q  201 taacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  5724077 taacaactttctctctcatactcacattatattctt 5724112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 21839193 - 21839130
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| || ||||| ||| | |||||||| | |||||||||||||||||| ||||    
T  21839193 gaaaaatgatatttatacaaccactttttgacaactttatctctcatactcacattatactctt 21839130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 36186906 - 36186867
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  36186906 acaactttctctctcatactcacattatattcttattctc 36186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 2756997 - 2756963
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  2756997 aaatgatatttgtacaaccaatttctaacaacttt 2756963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 9055270 - 9055304
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  9055270 aaatgatatttgtacaaccaatttctaacaacttt 9055304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 10619750 - 10619696
Alignment:
Q  182 tatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||| ||||  ||| | |||||||||| |||||||||||||||||||||||    
T  10619750 tatttgtacaacctttttttgacaactttctctctcatactcacattatattctt 10619696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 18926028 - 18925994
Alignment:
Q  202 aacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  18926028 aacaactttctctctcatactcacattatattctt 18925994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 23848092 - 23848158
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||||||||| || ||| |||||||||||| | ||||| ||| ||||| ||||| |||||    
T  23848092 aaatgatatttgtataatcattttttaacaactttctctatcatattcatattatcttcttattctc 23848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 27866594 - 27866528
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||| | ||||||||||||||||| ||||| |||||    
T  27866594 aaatgatatttgtacaaccatttttgtacaactttatctctcatactcacattatcttcttattctc 27866528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 33465096 - 33465030
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||| ||||| ||||||||||||||||| ||||| |||||    
T  33465096 aaatgatatttgtacaaccatttttgtacaattttctctctcatactcacattatcttcttattctc 33465030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 37856222 - 37856156
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||| | || ||||||||||||||| |||| |||||    
T  37856222 aaatgatatttgtacaaccattttgtgacaactttatctcacatactcacattatactcttattctc 37856156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 39875866 - 39875800
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||| || ||||| ||| |||||||||||| ||||||| ||| |||||| |||| |||||    
T  39875866 aaatgatatttatacaaccactttttaacaactttctctctcatattcatattatactcttattctc 39875800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 40108138 - 40108204
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||| |||||| ||||| |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  40108138 aaatgatgtttgtacaaccatttttatacaactttctctctcatactcacattatcttcttattctc 40108204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 4971331 - 4971364
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  4971331 acaactttctctctcatactcacattatattctt 4971364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 30180518 - 30180587
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||||||||| ||||| ||| | |||||||| | || |||| |||||||||| |||| |||||    
T  30180518 gaaaaatgatatttgtacaaccactttgtcacaactttatctcacatattcacattatactcttattctc 30180587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 43079662 - 43079629
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  43079662 acaactttctctctcatactcacattatattctt 43079629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 43444638 - 43444695
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||||| |||| |||||    
T  43444638 aaatgatatttgtacaaccactttatgacaactttctctctcatacttacatcatatt 43444695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 31785528 - 31785476
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacatt 228  Q
    |||||||||||||| ||||| ||| | | |||||||| |||||||||||||||    
T  31785528 aaatgatatttgtacaaccactttatgaaaactttctctctcatactcacatt 31785476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 37392185 - 37392125
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  37392185 aaatgatatttgtacaaccattttttgacaactttctctctcatactcacattatattctt 37392125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 1370342 - 1370285
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||||| ||| |||||||||||| || |||||||||||||||||    
T  1370342 aaatgatatttgtacaaccactttgtaacaactttctctcacatactcacattatatt 1370285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 45081401 - 45081461
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||||||| |||||| ||| | ||||||||||||||||| |||||    
T  45081401 aaatgatatttgtacaaccaatttttaacaattttgtctctcatactcacattatgttctt 45081461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 7325729 - 7325783
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| | ||| ||| |||||||||||| |||||||||||||||||    
T  7325729 aaatgatatttgtacatccactttataacaactttctctctcatactcacattat 7325783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 1796499 - 1796556
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||||||||||| ||||    
T  1796499 aaatgatatttgtacaaccactttgtgacaactttctttctcatactcacattttatt 1796556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 41639856 - 41639799
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| | ||| |||||||||| ||| | ||||||||||||||||||||    
T  41639856 aaatgatatttgtacatccattttctaacaattttttctctcatactcacattatatt 41639799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 12959979 - 12960018
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  12959979 acaactttctttctcatactcacattatattcttattctc 12960018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 14710950 - 14710895
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattata 231  Q
    |||||||||||||| || || ||| | |||||||||| ||||||||||||||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaactttctctctcatactcacattata 14710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 27630938 - 27630977
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  27630938 acaactttctctctcatactcacattatattcttattctc 27630977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 38174263 - 38174224
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  38174263 acaactttctctctcatactcacattatattcttattctc 38174224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 5502374 - 5502428
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||| |||||||||    
T  5502374 aaatgatatttgtacaaccactttgtgacaactttctctctcatattcacattat 5502428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 5740842 - 5740788
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||| | |||||||||||||||||    
T  5740842 aaatgatatttgtacaaccactttttgacaactttttctctcatactcacattat 5740788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 6243048 - 6243114
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| || || |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  6243048 aaatgatatttgtacaatcatttttgtacaactttctctctcatactcacattatcttcttattctc 6243114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 7376509 - 7376543
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  7376509 aaatgatatttgtacaaccaatttctaacaacttt 7376543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 9047127 - 9047057
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctcactc 246  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||| || |||||||| |||| |||| ||||    
T  9047127 aaatgatatttgtacaaccactttttgacaactttctctctcatccttacattatactcttattctaactc 9047057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 9048384 - 9048350
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||||||||| ||||||||||||||    
T  9048384 aaatgatatttgtataaccattttctaacaacttt 9048350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 11138908 - 11138970
Alignment:
Q  174 aaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||||| ||| | ||| | |||||||||| ||||||||||| || ||||||||    
T  11138908 aaaaatgatatttgtacaactattttgtgacaactttctctctcatactcatatgatattctt 11138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 11789813 - 11789871
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattc 234  Q
    |||||||||||||| || || ||| | |||||||||| ||| |||||||||||||||||    
T  11789813 aaatgatatttgtacaaacactttatgacaactttctttcttatactcacattatattc 11789871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 12659093 - 12659131
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttct 241  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  12659093 acaactttctctctcatactcacattatattcttgttct 12659131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 13924025 - 13924091
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||||| |||||| |||||||||| ||||| |||||    
T  13924025 aaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacattatcttcttattctc 13924091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 14233701 - 14233635
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||| | ||| | |||||||||| |||||||||| |||||| ||||| |||||    
T  14233701 aaatgatatttgtacaactatttttttacaactttctctctcatactcgcattatcttcttattctc 14233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 23265411 - 23265345
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||||||| | |||   |||||||| | ||||||||||||||||| ||||| |||||    
T  23265411 aaatgatatttgtataactatttttatacaactttttctctcatactcacattatcttcttattctc 23265345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 25430660 - 25430726
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   ||||| |||| ||||||||||||||||| ||||| |||||    
T  25430660 aaatgatatttgtacaaccatttttgtacaaccttctatctcatactcacattatcttcttattctc 25430726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 43590708 - 43590774
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||||||||| || |||   | |||||||| ||||||||||||||||| ||||| |||||    
T  43590708 aaatgatatttgtataatcatttttgtataactttctctctcatactcacattatcttcttattctc 43590774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 44103779 - 44103833
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||| ||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  44103779 aaattatatttgtacaaccactttatgacaactttctctctcatactcacattat 44103833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 157070 - 157127
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||| ||||||||||    
T  157070 aaatgatatttgtacaaccattttgcgacaactttctctctcatacttacattatatt 157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 6004985 - 6005018
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  6004985 acaactttctctctcatactcacattatattctt 6005018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 7279958 - 7279917
Alignment:
Q  201 taacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||| ||||||||||||||||| ||||| |||||    
T  7279958 taacaactttctctctcatactcacattatcttcttattctc 7279917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 12045683 - 12045650
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  12045683 acaactttctctctcatactcacattatattctt 12045650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 14548853 - 14548820
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  14548853 acaactttctctctcatactcacattatattctt 14548820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 29107998 - 29108055
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| || || ||| |||||||||||| | | ||||||||||||||||    
T  29107998 aaatgatatttgtacaatcattttttaacaactttctcttttatactcacattatatt 29108055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 42768182 - 42768125
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    ||||||||||||||||| ||| | ||| | |||| ||||| |||||||||||||||||    
T  42768182 gaaaaatgatatttgtacaactactttttgacaattttctctctcatactcacattat 42768125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 44380645 - 44380612
Alignment:
Q  202 aacaactttctgtctcatactcacattatattct 235  Q
    ||||||||||| ||||||||||||||||||||||    
T  44380645 aacaactttctctctcatactcacattatattct 44380612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 3893429 - 3893389
Alignment:
Q  202 aacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||| | |||||||||||||||||| ||||||||||    
T  3893429 aacaactttttctctcatactcacattatactcttcttctc 3893389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 24798389 - 24798357
Alignment:
Q  201 taacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||| ||||||||||||||||||||    
T  24798389 taacaactttctctctcatactcacattatatt 24798357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 39211056 - 39211108
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacatt 228  Q
    |||||||||||| | ||||| ||| | |||||||||| |||||||||||||||    
T  39211056 aaatgatatttgaacaaccattttttgacaactttctctctcatactcacatt 39211108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 13734417 - 13734357
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  13734417 aaatgatatttgtacaaccactttatgacaactttctctctcatactcacattatattctt 13734357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 8725479 - 8725413
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||| ||||||||| ||||| ||| | |||||||||| ||||||||||||||||||||||| |||||    
T  8725479 aaattatatttgtacaaccactttattacaactttctctctcatactcacattatattcttattctc 8725413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 33910145 - 33910079
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||  ||||| ||| | |||||||||| ||||||||||||||||||||||| |||||    
T  33910145 aaatgatatttgttcaaccattttttgacaactttctctctcatactcacattatattcttattctc 33910079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 14206403 - 14206457
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  14206403 aaatgatatttgtacaaccattttttgacaactttctctctcatactcacattat 14206457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 33567280 - 33567226
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  33567280 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattat 33567226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 6865844 - 6865787
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||| |||||    
T  6865844 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacataatatt 6865787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 31025037 - 31024996
Alignment:
Q  201 taacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  31025037 taacaactttctctctcatactcacattatattcttattctc 31024996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 2117675 - 2117615
Alignment:
Q  182 tatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||| ||| | ||| | |||||||||| ||||||||||||||||||||||| |||||    
T  2117675 tatttgtacaacaactttgtgacaactttctctctcatactcacattatattcttattctc 2117615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 2456067 - 2456106
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  2456067 acaactttctatctcatactcacattatattcttattctc 2456106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 19824257 - 19824218
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  19824257 acaactttctatctcataatcacattatattcttcttctc 19824218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 12203161 - 12203227
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||||| |||||| |||||||||| ||||| |||||    
T  12203161 aaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacattatcttcttattctc 12203227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 32873217 - 32873183
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  32873217 aaatgatatttgtacaaccaatttctaacaacttt 32873183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 39458671 - 39458725
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    ||||||||| |||| ||||| ||| | |||||||||| |||||||||||||||||    
T  39458671 aaatgatatctgtacaaccagtttttgacaactttctctctcatactcacattat 39458725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 91256 - 91289
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  91256 acaactttctctctcatactcacattatattctt 91289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 372777 - 372720
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    ||||||| |||||| ||||| ||| | |||||||||| |||||||||||||| |||||    
T  372777 aaatgatttttgtacaaccattttgtgacaactttctctctcatactcacatgatatt 372720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 21210830 - 21210887
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    ||||||||||||||| | ||||| ||| | |||||||||| |||||||| ||||||||    
T  21210830 gaaaaatgatatttgaacaaccactttttgacaactttctctctcatacacacattat 21210887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 29227721 - 29227774
Alignment:
Q  177 aatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    ||||||||||||| ||| | ||| | |||||||||| |||||||||||||||||    
T  29227721 aatgatatttgtacaactactttgtgacaactttctctctcatactcacattat 29227774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 3960200 - 3960160
Alignment:
Q  202 aacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||| | ||||||||||||||||||||||| |||||    
T  3960200 aacaactttatatctcatactcacattatattcttattctc 3960160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 7080546 - 7080610
Alignment:
Q  178 atgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||| || || |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  7080546 atgatatttgtacaatcatttttgtacaactttctctctcatactcacattatcttcttattctc 7080610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 9636187 - 9636155
Alignment:
Q  204 caactttctgtctcatactcacattatattctt 236  Q
    ||||||||| |||||||||||||||||||||||    
T  9636187 caactttctctctcatactcacattatattctt 9636155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 41210570 - 41210510
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||||| || |||||  || |||||||||||| ||||| | |||||||||||||||    
T  41210570 aaatgatatttatacaaccatattttaacaactttctctctcagagtcacattatattctt 41210510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 41460156 - 41460196
Alignment:
Q  202 aacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||| | ||||||||||||||||||||||| |||||    
T  41460156 aacaactttatctctcatactcacattatattcttattctc 41460196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 40596111 - 40596051
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||||||||    
T  40596111 aaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatattctt 40596051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 40139129 - 40139195
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||||| || |||||    
T  40139129 aaatgatatttgtacaaccattttatgacaactttctctctcatactcacattatatttttattctc 40139195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 41507251 - 41507191
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||||||||||||| |||||    
T  41507251 aaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatgttctt 41507191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 49453494 - 49453549
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattata 231  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||||||||||||||    
T  49453494 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattata 49453549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 5477220 - 5477166
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  5477220 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattat 5477166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 14983787 - 14983841
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| |||||||||||| ||||||| |||||||||    
T  14983787 aaatgatatttgtacaaccactttttaacaactttctctctcatattcacattat 14983841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 27687576 - 27687510
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||| | |||||||||||||||||||| || |||||    
T  27687576 aaatgatatttgtacaaccattttgtgacaactttatctctcatactcacattatatttttattctc 27687510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 29264018 - 29264084
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||||| |||||||| |||| |||||    
T  29264018 aaatgatatttgtacaaccactttatgacaactttctttctcatacttacattatagtcttattctc 29264084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 45272217 - 45272163
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||    
T  45272217 aaatgatatttgtacaaccactttttgacaactttctctctcatactcacattat 45272163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 48325835 - 48325769
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||| ||||| |||||||||||||||||| |||| |||||    
T  48325835 aaatgatatttgtacaaccattttgtgacaattttctatctcatactcacattatactcttattctc 48325769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 49590031 - 49589965
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||| | |||||||||||||||||||| || |||||    
T  49590031 aaatgatatttgtacaaccactttattacaactttttatctcatactcacattatatttttattctc 49589965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 50460769 - 50460703
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  50460769 aaatgatatttgtacaaccatttttgtacaactttctttctcatactcacattatcttcttattctc 50460703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 3826872 - 3826807
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttct 241  Q
    |||||||||||||| ||| ||||| |||||||||| | ||||||| ||||||||| ||||| ||||    
T  3826872 aaatgatatttgtacaactaatttttaacaactttatctctcatattcacattatcttcttattct 3826807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 5975551 - 5975611
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||| |||| | ||| ||| | |||||||||| |||||||||||||||||||||||    
T  5975551 aaatgatatatgtacatccactttttgacaactttctctctcatactcacattatattctt 5975611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 43612137 - 43612077
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||||  |||||||||||||    
T  43612137 aaatgatatttgtacaaccattttatgacaactttctctctcatacatacattatattctt 43612077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 30196755 - 30196794
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  30196755 acaactttctctctcatactcacattatattcttattctc 30196794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 30530431 - 30530396
Alignment:
Q  201 taacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  30530431 taacaactttctctctcatactcacattatattctt 30530396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 39815387 - 39815426
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  39815387 acaactttctctctcatactcacattatattcttattctc 39815426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 49596276 - 49596315
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  49596276 acaactttctctctcatactcacattatattcttattctc 49596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 3606162 - 3606128
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  3606162 aaatgatatttgtacaaccaatttctaacaacttt 3606128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 11121495 - 11121561
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||| | |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  11121495 aaatgatatttgtacaacaacttttgtacaactttctctctcatactcacattatcttcttattctc 11121561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 27810315 - 27810281
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaacttt 210  Q
    |||||||||||||| ||||||||||||||||||||    
T  27810315 aaatgatatttgtacaaccaatttctaacaacttt 27810281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 46903484 - 46903538
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| |||   |||||||||| |||||||||||||||||    
T  46903484 aaatgatatttgtacaaccattttgatacaactttctctctcatactcacattat 46903538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 47059947 - 47059881
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| |||||||||| | ||  ||| ||||||||||||||| |||||    
T  47059947 aaatgatatttgtacaaccattttttaacaactttatctcatatattcacattatattcttattctc 47059881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 51571418 - 51571472
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||||| ||||||| |||||||||    
T  51571418 aaatgatatttgtacaaccactttttgacaactttctctctcatattcacattat 51571472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 17652643 - 17652700
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||  | ||| ||||||||||||  |||||||||||||||||||    
T  17652643 aaatgatatttgtacaagtattttataacaactttctcgctcatactcacattatatt 17652700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 27352671 - 27352704
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  27352671 acaactttctctctcatactcacattatattctt 27352704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 29254096 - 29254063
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  29254096 acaactttctctctcatactcacattatattctt 29254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 34818101 - 34818044
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| |  || || ||||||||||||| ||||||||||| ||||||||    
T  34818101 aaatgatatttgtacattcatttcctaacaactttctctctcatactcatattatatt 34818044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 34941950 - 34941917
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  34941950 acaactttctctctcatactcacattatattctt 34941917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 36930784 - 36930751
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  36930784 acaactttctctctcatactcacattatattctt 36930751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 8959274 - 8959221
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||||||||| ||| |||||||||    | ||||||||||||||||||    
T  8959274 aaatgatatttgtataaccattttgtaacaactt----tatcatactcacattatatt 8959221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 23554791 - 23554831
Alignment:
Q  202 aacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||| | ||||||||||||||||||||||| |||||    
T  23554791 aacaactttatctctcatactcacattatattcttattctc 23554831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 29293962 - 29294022
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||| | ||| | |||||||||| ||||||| |||||||||| ||||    
T  29293962 aaatgatatttgtacaactactttatgacaactttctctctcatagtcacattatactctt 29294022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 30414878 - 30414938
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||||| |||   ||||| |||| ||||||||||||||||| |||||    
T  30414878 aaatgatatttgtacaaccatttttgtacaaccttctctctcatactcacattatcttctt 30414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 44950478 - 44950418
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||| ||| | || | ||| |||||||||||| | |||||||||||||||||||||    
T  44950478 aaatgatatatgtttgacaactttttaacaactttctctttcatactcacattatattctt 44950418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 50797794 - 50797854
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| || || ||| | |||||||||| |||||||||||||| | ||||||    
T  50797794 aaatgatatttgtacaatcattttgtgacaactttctctctcatactcacatgacattctt 50797854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 51571351 - 51571412
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||||||||||| ||||| |   | ||||||||||  ||||||||||||||||||||||    
T  51571351 gaaaaatgatatttgtacaaccattcagtgacaactttct--ctcatactcacattatattctt 51571412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 31657 - 31591
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||||| |||| |||||    
T  31657 aaatgatatttgtacaaccattttttgacaactttctctctcatactcacattatactcttattctc 31591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 3484773 - 3484839
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||  ||||| ||| | |||||||||| ||||||||||||||||||||||| |||||    
T  3484773 aaatgatatttgtccaaccattttattacaactttctctctcatactcacattatattcttattctc 3484839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 29846948 - 29846882
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||||||||||||||||| |||||    
T  29846948 aaatgatatttgtacaaccatttttgtacaactttctctctcatactcacattatattcttattctc 29846882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 31997813 - 31997882
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||||||||| ||||| ||| | |||||||||| | ||||||||||||||| ||||| |||||    
T  31997813 gaaaaatgatatttgtacaaccactttgtgacaactttctttttcatactcacattattttcttattctc 31997882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 29057662 - 29057728
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  29057662 aaatgatatttgtacaaccatttttgtacaactttctctctcatactcacattatcttcttattctc 29057728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 35554172 - 35554118
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    ||||||||||||||||| || ||| | |||||||||| |||||||||||||||||    
T  35554172 aaatgatatttgtataatcactttttgacaactttctctctcatactcacattat 35554118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 34662017 - 34662078
Alignment:
Q  173 gaaaaatgatatttgtataa-ccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||||||||| ||| ||| || ||||||| | ||||||||||||||||||||    
T  34662017 gaaaaatgatatttgtataacccattttttagcaactttatctctcatactcacattatatt 34662078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 1834546 - 1834586
Alignment:
Q  202 aacaactttctgtctcatactcacattatattcttcttctc 242  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  1834546 aacaactttctctctcatactcacattatattcttattctc 1834586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 47683804 - 47683856
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacatt 228  Q
    |||||||||||||| ||||| ||| | |||||||||| |||||||||||||||    
T  47683804 aaatgatatttgtacaaccattttgtgacaactttctctctcatactcacatt 47683856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 22153905 - 22153944
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  22153905 acaactttctctctcatactcacattatattcttattctc 22153944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 43900787 - 43900748
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  43900787 acaactttctctctcatactcacattatattcttattctc 43900748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 23869035 - 23868981
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| |||||| ||||| | |||||||||||||||    
T  23869035 aaatgatatttgtacaaccattttataacaattttctctttcatactcacattat 23868981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 23907044 - 23906978
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| | | | |||||||||| |||||||||||||| | |||||| |||||    
T  23907044 aaatgatatttgtacaaccattatgttacaactttctctctcatactcacatgagattcttattctc 23906978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 35368625 - 35368691
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||| | |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  35368625 aaatgatatttgtacaactatttttgtacaactttctctctcatactcacattatcttcttattctc 35368691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 40785730 - 40785696
Alignment:
Q  202 aacaactttctgtctcatactcacattatattctt 236  Q
    ||||||||||| |||||||||||||||||||||||    
T  40785730 aacaactttctctctcatactcacattatattctt 40785696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 43169810 - 43169756
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | |||||||| | |||||||||||||||||    
T  43169810 aaatgatatttgtacaaccattttgtgacaactttttctctcatactcacattat 43169756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 46952952 - 46953006
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| ||| | | |||||||| |||||||||||||||||    
T  46952952 aaatgatatttgtacaaccattttttgataactttctctctcatactcacattat 46953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 48490570 - 48490516
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattat 230  Q
    |||||||||||||| ||||| |||   |||||||||| |||||||||||||||||    
T  48490570 aaatgatatttgtacaaccacttttgtacaactttctctctcatactcacattat 48490516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 50745563 - 50745629
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| || || |||   |||||||||| ||||||||||||||||| ||||| |||||    
T  50745563 aaatgatatttgtacaatcatttttgtacaactttctctctcatactcacattatcttcttattctc 50745629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 7244 - 7211
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  7244 acaactttctctctcatactcacattatattctt 7211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 1901956 - 1901923
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  1901956 acaactttctctctcatactcacattatattctt 1901923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 1911402 - 1911369
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  1911402 acaactttctctctcatactcacattatattctt 1911369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 8868913 - 8868946
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  8868913 acaactttctctctcatactcacattatattctt 8868946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 36869867 - 36869834
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  36869867 acaactttctctctcatactcacattatattctt 36869834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 45150296 - 45150263
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  45150296 acaactttctctctcatactcacattatattctt 45150263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 3328 - 3277
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacat 227  Q
    |||||||||||||| ||||| ||||| |||||||||| ||||||||||||||    
T  3328 aaatgatatttgtacaaccactttctcacaactttctctctcatactcacat 3277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 31517237 - 31517171
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| ||||| ||| | |||||||| | |||||||||||||||||| |||| |||||    
T  31517237 aaatgatatttgtacaaccactttttgacaactttttctctcatactcacattatactcttattctc 31517171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 2060690 - 2060633
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||| ||||||| ||| | |||||||| | ||||||||||||||||||||    
T  2060690 aaatgatatttgaataaccattttatgacaactttttctctcatactcacattatatt 2060633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 2718041 - 2717980
Alignment:
Q  181 atatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||| ||||| |||||| |||||||||||| ||||||| |||||||||||| || |||||    
T  2718041 atatttatataatcaatttgtaacaactttctctctcataatcacattatattattgttctc 2717980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 7693354 - 7693395
Alignment:
Q  201 taacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  7693354 taacaactttctctctcatactcacattatattcttattctc 7693395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 30253345 - 30253304
Alignment:
Q  201 taacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  30253345 taacaactttctctctcatactcacattatattcttattctc 30253304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 32644626 - 32644683
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||||| ||| | ||| | |||||||||| ||||||||||||||||||||    
T  32644626 aaatgatatttgtacaactattttttgacaactttctctctcatactcacattatatt 32644683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 18792464 - 18792429
Alignment:
Q  201 taacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  18792464 taacaactttctctctcatactcacattatattctt 18792429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 23633353 - 23633314
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  23633353 acaactttctctctcatactcacattatattcttattctc 23633314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 1196061 - 1196127
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||||||| || || ||| | |||||||||| ||| |||||||||||||| |||| |||||    
T  1196061 aaatgatatttgtacaatcactttttgacaactttctctctaatactcacattatactcttattctc 1196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 14094952 - 14094985
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  14094952 acaactttctctctcatactcacattatattctt 14094985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 16352217 - 16352160
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatatt 233  Q
    ||||||||||| || ||||| ||| |||||| ||||| ||||||| ||||||||||||    
T  16352217 aaatgatatttatacaaccattttataacaattttctctctcataatcacattatatt 16352160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 16743296 - 16743263
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  16743296 acaactttctctctcatactcacattatattctt 16743263  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 32729930 - 32729963
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  32729930 acaactttctctctcatactcacattatattctt 32729963  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 12177580 - 12177640
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    ||||| |||||||| ||| | ||| | |||||||||| | |||||||||||||||||||||    
T  12177580 aaatgttatttgtacaactattttgtgacaactttctctttcatactcacattatattctt 12177640  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 12441541 - 12441601
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||||| ||| | ||| | |||||||||| |||||||||||||| | ||||||    
T  12441541 aaatgatatttgtacaactactttgtgacaactttctctctcatactcacatgacattctt 12441601  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 16328758 - 16328699
Alignment:
Q  176 aaatgatatttgtataaccaatttctaacaactttctgtctc--atactcacattatatt 233  Q
    |||||||||||||| ||||| ||| |||||||||| | ||||  ||||||||||||||||    
T  16328758 aaatgatatttgtacaaccattttataacaactttatctctcatatactcacattatatt 16328699  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 16337954 - 16337922
Alignment:
Q  201 taacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||| ||||||||||||||||||||    
T  16337954 taacaactttctctctcatactcacattatatt 16337922  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 16368078 - 16368046
Alignment:
Q  201 taacaactttctgtctcatactcacattatatt 233  Q
    |||||||||||| ||||||||||||||||||||    
T  16368078 taacaactttctttctcatactcacattatatt 16368046  T

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Target: scaffold0511 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 11677 - 11712
Alignment:
Q  201 taacaactttctgtctcatactcacattatattctt 236  Q
    |||||||||||| |||||||||||||||||||||||    
T  11677 taacaactttctctctcatactcacattatattctt 11712  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 4356 - 4395
Alignment:
Q  203 acaactttctgtctcatactcacattatattcttcttctc 242  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  4356 acaactttctatctcatactcacattatattcttattctc 4395  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 199307 - 199340
Alignment:
Q  203 acaactttctgtctcatactcacattatattctt 236  Q
    |||||||||| |||||||||||||||||||||||    
T  199307 acaactttctctctcatactcacattatattctt 199340  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 263766 - 263729
Alignment:
Q  173 gaaaaatgatatttgtataaccaatttctaacaacttt 210  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  263766 gaaaaatgatatttgtacaaccactttctaacaacttt 263729  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 15220 - 15180
Alignment:
Q  201 taacaactttctgtctcatactcacattatattcttcttct 241  Q
    |||||||||||| |||||||||||||||||| |||| ||||    
T  15220 taacaactttctttctcatactcacattatactcttattct 15180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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