View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8361_low_13 (Length: 245)
Name: NF8361_low_13
Description: NF8361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8361_low_13 |
 | |
|
| [»] chr1 (4 HSPs) |
| |
|
| [»] chr7 (2 HSPs) |
| |
|
| [»] chr4 (3 HSPs) |
| |
|
| [»] chr3 (2 HSPs) |
| |
|
| [»] chr6 (2 HSPs) |
| |
|
Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 5 - 245
Target Start/End: Complemental strand, 13868120 - 13867880
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
13868120 |
aatgaaatggtcatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccataaagtaccaaaagtagcacaatgtagaaat |
13868021 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13868020 |
aaatgagaaacagactctgccatgccacacccagtaacacacaatgctgcctcgccaacaatgataccacgccggagaaggtgattcttagtcggcaacc |
13867921 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaaccttaagc |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13867920 |
tatcccgtaacaatctccaagcaaaaatggaaaccttaagc |
13867880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 33150830 - 33150937
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||||||||||||||| || |||||||||||||| |||||| |||||| || ||||||||| | |||||||| || || || |||||| |
|
|
| T |
33150830 |
aatgaaatggtcatcaatattaagggggtcggcacctgacattccgatccaagacctgataagatgccacaatgagccaaaagtggcgcagtgaataaat |
33150929 |
T |
|
| Q |
105 |
aaatgaga |
112 |
Q |
| |
|
|||||||| |
|
|
| T |
33150930 |
aaatgaga |
33150937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 26510662 - 26510426
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||| ||||||| ||| ||| ||||||||||||| |||||| |||||| | ||||||||| ||||| ||| | |||||||| ||||| |
|
|
| T |
26510662 |
aatgaaatggtcatcgatattaaaggggtcaacacctgacattccgatccaagacctgatatgatgccacaatgtaccgaaaatggcacaatgaataaac |
26510563 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
|| |||| ||||||| || |||| || || |||||||||| |||| ||| | |||| | ||||| | | ||| | ||||||||||||||||| |
|
|
| T |
26510562 |
aagtgaggcgcagactcttccttgccgcatcctgtaacacacataactgcttcggtattgattactccacgtctcataagattattcttagtcggcaacc |
26510463 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaacctt |
241 |
Q |
| |
|
| ||||| ||||| | |||||||| ||||| ||||| |
|
|
| T |
26510462 |
tgtcccgcaacaaccgtcaagcaaagatggagacctt |
26510426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 45795267 - 45795299
Alignment:
| Q |
213 |
aacaatctccaagcaaaaatggaaaccttaagc |
245 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
45795267 |
aacaatccccaagcaaaaatggaaaccttaagc |
45795299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 245
Target Start/End: Original strand, 35213468 - 35213708
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
35213468 |
aatgaaatggtcatcaatattaaggggatcaacacctgacattccaatccaacacctgacaaaatgccacaaagtaacgaaagtagcacaatgtataaat |
35213567 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
35213568 |
aaatgggaaacagactctgccatgccgcacccagtaacacacaatgctgcctcgccaacaatgatgccatgccggagaaggtgattcttagtcggcaacc |
35213667 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaaccttaagc |
245 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
35213668 |
tatcccgtaacaatcttcaagcaaaaatggaaaccttaagc |
35213708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 26855548 - 26855784
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| ||| |||||||| || ||||||||||||||||| ||| || |||||| || ||||||||||| ||||||||| | ||||| ||||| |
|
|
| T |
26855548 |
aatgaaatggtcattaatattaaaagggtcagcacctgacattccgatcaaagacctgataagatgccacaaagaaccaaaagtggtgcaatgaataaaa |
26855647 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
| |||||| || ||| |||| || ||||| || ||||||| ||||||| |||| |||||||||| | ||| ||||||||||||||||||| |
|
|
| T |
26855648 |
agatgagatgtagtctcttccataccgcaccctgtgacacacatacaagcctcgctgttgattatgccacgcctaaaaagatgattcttagtcggcaacc |
26855747 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaacctt |
241 |
Q |
| |
|
|||| || || |||| ||||||||||||||||||||| |
|
|
| T |
26855748 |
tatcacgcaataatcgccaagcaaaaatggaaacctt |
26855784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 5 - 245
Target Start/End: Complemental strand, 43517035 - 43516795
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
43517035 |
aatgaaatggtcatcaatattaaggggatcagcacctgacattccaatccaacacctgataaaatgccacaaagtaccgaaagtagcacaatgtataaat |
43516936 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
|||||||||||||||| | |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
43516935 |
aaatgagaaacagactatgtcatgccgcacccagtaacacacaatgctacctcgccaacgatgatgccacgccggaggagatgattcttagtcggcaacc |
43516836 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaaccttaagc |
245 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
43516835 |
tatcccataacaatctccaagcaaaaatggaaaccttaagc |
43516795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 20543920 - 20544156
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||||||||||| ||| ||||||||||||||||| |||||| |||||| || ||||||||| | ||||||||| || || || |||||| |
|
|
| T |
20543920 |
aatgaaatggtcatcaatattaaaggggtcagcacctgacattccgatccaagacctgataagatgccacaatgaaccaaaagtggcgcagtgaataaat |
20544019 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
|||||||| || ||| |||| || ||||| || ||||||| || |||||| |||| |||||||||| ||||| || |||||||||||||||| |
|
|
| T |
20544020 |
aaatgagatgtagtctcttccataccgcaccctgtgacacacatacttgtctcgccgttgattatgccacgccttagaagatggttcttagtcggcaacc |
20544119 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaacctt |
241 |
Q |
| |
|
|||| || || |||| ||||| ||||||||||||||| |
|
|
| T |
20544120 |
tatctcgcaataatcgccaagtaaaaatggaaacctt |
20544156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 38295784 - 38295820
Alignment:
| Q |
207 |
tcccgtaacaatctccaagcaaaaatggaaaccttaa |
243 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
38295784 |
tcccgtaacaacctccaagcaaaaatggaaactttaa |
38295820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 40514000 - 40513771
Alignment:
| Q |
16 |
catcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaac |
115 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||| || |
|
|
| T |
40514000 |
catcaatattaaggggatcagcacatgacattccaatccaacacctgacaaaatgccataaagtaccaaaagtaggacaatgtagaaataaatgagagac |
40513901 |
T |
|
| Q |
116 |
agactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaac |
215 |
Q |
| |
|
|||||| |||||||||||||| | |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
40513900 |
agactctgccatgccacacccggaaacacacaatgctgcctcaccgacgatgataccacgccgaagaaggtgattcttagtcggcaacctatcccgtaac |
40513801 |
T |
|
| Q |
216 |
aatctccaagcaaaaatggaaaccttaagc |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
40513800 |
aatctccaagcaaaaatggaaaccttaagc |
40513771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 34829254 - 34829490
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||||||||||| ||| | | ||||||||||||| |||||| |||||| | ||||||||| |||| ||||| |||||||| ||||| |
|
|
| T |
34829254 |
aatgaaatggtcatcaatattaaaggggttaacacctgacattccgatccaagacctgatatgatgccacaatgtactgaaagtggcacaatgaataaac |
34829353 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
|| |||| ||||||| || |||| ||||| |||||||||| || | ||| || |||| | ||||| | ||||| | ||||||| ||| ||||| |
|
|
| T |
34829354 |
aagtgaggcgcagactcttccttgccgcaccctgtaacacacataactacttcggcattgattactccacgtcttagaagattattcttaatcgacaacc |
34829453 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaacctt |
241 |
Q |
| |
|
| ||||| ||||| | ||||||||| ||||| ||||| |
|
|
| T |
34829454 |
tgtcccgcaacaaccgccaagcaaagatggagacctt |
34829490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 11196186 - 11196422
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| |||||||||||||| | || |||||||||||| |||||| |||||| || ||||||||| | ||||||||| || || || |||||| |
|
|
| T |
11196186 |
aatgaaatggtcatcaatattaaggaggtcgacacctgacattctgatccaagacctgataagatgccacaatgaaccaaaagtggcgcagtgaataaat |
11196285 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacc |
204 |
Q |
| |
|
|||||||| || ||| ||||| || ||||| |||||||||| ||||||||||| |||| |||||||||| ||||| || |||||||||||||||| |
|
|
| T |
11196286 |
aaatgagacgcaatctctgccataccgcaccctgtaacacacataactgcctcgccattgattatgccacgccttagaagatggttcttagtcggcaacc |
11196385 |
T |
|
| Q |
205 |
tatcccgtaacaatctccaagcaaaaatggaaacctt |
241 |
Q |
| |
|
|||| || ||||||| ||||| ||||||||||||||| |
|
|
| T |
11196386 |
tatctcgcaacaatcgccaagtaaaaatggaaacctt |
11196422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 241
Target Start/End: Original strand, 32624217 - 32624425
Alignment:
| Q |
33 |
tcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacagactcagccatgccac |
132 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || ||||||||| | ||||||||| || ||||| |||||||||||||| || ||| |||| || | |
|
|
| T |
32624217 |
tcagcacctgacattccaatccaagacctgataagatgccacaatgaaccaaaagtggcgcaatgaataaataaatgagatgtagtctcttccataccgc |
32624316 |
T |
|
| Q |
133 |
acccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaatctccaagcaaaaat |
232 |
Q |
| |
|
| || || ||||||| ||||||||| |||| |||||||||| ||||| || |||||||||||||||||||| | || |||| |||| ||||||| |
|
|
| T |
32624317 |
atcctgtgacacacatacatgcctcgccgttgattatgccacgccttagaagatggttcttagtcggcaacctatctctcaataatcgccaaacaaaaat |
32624416 |
T |
|
| Q |
233 |
ggaaacctt |
241 |
Q |
| |
|
||||||||| |
|
|
| T |
32624417 |
ggaaacctt |
32624425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 144301 - 144246
Alignment:
| Q |
33 |
tcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagt |
88 |
Q |
| |
|
||||||||||||||||| |||||| |||||| || ||||||||||| ||||||||| |
|
|
| T |
144301 |
tcagcacctgacattccgatccaagacctgataagatgccacaaagaaccaaaagt |
144246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 21368223 - 21367987
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaat |
104 |
Q |
| |
|
||||| |||| ||||||||||||| || ||||||||||||||||| |||||| |||||| || ||||||||| | ||||||||| || ||||| ||||| |
|
|
| T |
21368223 |
aatgaaatggtcatcaatattaagagggtcagcacctgacattccgatccaagacctgataagatgccacaatgaaccaaaagtggcgcaatgaataaaa |
21368124 |
T |
|
| Q |
105 |
aaatgagaaacagactcagccatgccacacccagtaacacacaatgc-tgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaac |
203 |
Q |
| |
|
| || ||| || ||| |||| || ||||| || ||||| | | | ||||||||| |||| |||||||||| || || || ||||||||||||||| |
|
|
| T |
21368123 |
agataagatgtagtctcttccataccgcaccctgtgacaca-attacatgcctcgccgttgattatgccacgccttaggagatggttcttagtcggcaac |
21368025 |
T |
|
| Q |
204 |
ctatcccgtaacaatctccaagcaaaaatggaaacctt |
241 |
Q |
| |
|
||||| | || |||| ||||| ||||||||||||||| |
|
|
| T |
21368024 |
ctatctctcaataatcgccaagaaaaaatggaaacctt |
21367987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 979392 - 979350
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacatt |
47 |
Q |
| |
|
||||| |||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
979392 |
aatgaaatggtcatcaatattaaggggatcaccacctgacatt |
979350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 245
Target Start/End: Complemental strand, 14687285 - 14687073
Alignment:
| Q |
33 |
tcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacagactcagccatgccac |
132 |
Q |
| |
|
||||||||||||||||| |||||| |||||| || ||||||||||| ||||||||| | ||||| ||||| | |||||| || ||| ||| || | |
|
|
| T |
14687285 |
tcagcacctgacattccgatccaagacctgataagatgccacaaagaaccaaaagtggtgcaatgaataaaaagatgagatgtagtctcttccacaccgc |
14687186 |
T |
|
| Q |
133 |
acccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaatctccaagcaaaaat |
232 |
Q |
| |
|
|||| || ||||||| |||| | |||| |||||||||| | ||| ||||||||||||||||||||||| || || |||| |||||||||||| |
|
|
| T |
14687185 |
accctgtgacacacatacaaacctcactgttgattatgccacgcctaaaaagatgattcttagtcggcaacctatcacgcaataatcgccaagcaaaaat |
14687086 |
T |
|
| Q |
233 |
ggaaaccttaagc |
245 |
Q |
| |
|
||||||||||||| |
|
|
| T |
14687085 |
ggaaaccttaagc |
14687073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 26513744 - 26513795
Alignment:
| Q |
190 |
tcttagtcggcaacctatcccgtaacaatctccaagcaaaaatggaaacctt |
241 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
26513744 |
tcttggtcggcaacctatcccgcaacaactgccaagcaaaaatggaaacctt |
26513795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 25900869 - 25900925
Alignment:
| Q |
5 |
aatgagatggacatcaatattaaggggatcagcacctgacattccaatccaacacct |
61 |
Q |
| |
|
||||| |||| |||||||||||| ||| ||| ||||||||||||| |||||| |||| |
|
|
| T |
25900869 |
aatgaaatggtcatcaatattaaaggggtcaacacctgacattccgatccaagacct |
25900925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University