View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8364_low_25 (Length: 242)
Name: NF8364_low_25
Description: NF8364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8364_low_25 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 39448275 - 39448051
Alignment:
| Q |
18 |
atatcttccttttgattcaagttaagctcttcttttctatcttaaaaaatgtaaaatttcccatttgaattaagcagcatttaatacatgcgtgtattca |
117 |
Q |
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| T |
39448275 |
atatcttccttttgattcaagttaagctcttcttttctatcttaaaaaatgtaaaatttcccatttgaattaagcagcatttaatacatgcgtgtattca |
39448176 |
T |
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| Q |
118 |
aagtcgatattgtagtttatataaaaacacattacttttgtatccatttcttatatatccatttctcttctatatgtaaaaatatgcaaagatttccttt |
217 |
Q |
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| T |
39448175 |
aagtcgatattgtagtttatataaaaacacattacttttatatccatttcttatatatacatttctcttctatatgtaaaaatatgcaaagatttccttt |
39448076 |
T |
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| Q |
218 |
taaatcacgtagcagttaataagtg |
242 |
Q |
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||||||||||||||||||||||||| |
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| T |
39448075 |
taaatcacgtagcagttaataagtg |
39448051 |
T |
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