View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8364_low_5 (Length: 410)

Name: NF8364_low_5
Description: NF8364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8364_low_5
NF8364_low_5
[»] chr3 (59 HSPs)
chr3 (234-393)||(1280898-1281057)
chr3 (89-223)||(8437423-8437557)
chr3 (89-222)||(49823379-49823512)
chr3 (90-221)||(10297979-10298110)
chr3 (91-222)||(19557052-19557183)
chr3 (88-223)||(22721929-22722064)
chr3 (91-223)||(34080030-34080162)
chr3 (90-225)||(8817385-8817520)
chr3 (91-221)||(48340397-48340527)
chr3 (90-223)||(4238592-4238725)
chr3 (90-223)||(40690995-40691128)
chr3 (91-224)||(44785396-44785529)
chr3 (88-221)||(51406673-51406806)
chr3 (91-223)||(2787832-2787964)
chr3 (88-224)||(9111491-9111627)
chr3 (91-223)||(21295326-21295458)
chr3 (89-221)||(37508921-37509053)
chr3 (91-223)||(38964390-38964522)
chr3 (90-221)||(17653712-17653843)
chr3 (94-223)||(42507358-42507487)
chr3 (89-222)||(46208029-46208162)
chr3 (91-216)||(6013336-6013461)
chr3 (90-222)||(36095679-36095811)
chr3 (91-223)||(42170346-42170478)
chr3 (91-207)||(35513487-35513603)
chr3 (89-207)||(33942930-33943048)
chr3 (91-207)||(34988089-34988205)
chr3 (90-225)||(26019479-26019613)
chr3 (91-225)||(9213512-9213646)
chr3 (90-221)||(9213515-9213646)
chr3 (166-215)||(33128212-33128261)
chr3 (175-226)||(17653796-17653847)
chr3 (90-146)||(9027141-9027197)
chr3 (126-186)||(21917689-21917749)
chr3 (127-206)||(29285796-29285873)
chr3 (175-227)||(40690990-40691042)
chr3 (90-150)||(45652068-45652128)
chr3 (89-137)||(46208028-46208076)
chr3 (175-222)||(4238678-4238725)
chr3 (149-204)||(8951954-8952009)
chr3 (88-147)||(34988072-34988131)
chr3 (175-222)||(37509005-37509052)
chr3 (90-137)||(42170430-42170477)
chr3 (136-207)||(43323074-43323145)
chr3 (175-222)||(46208114-46208161)
chr3 (91-137)||(17653712-17653758)
chr3 (175-221)||(21295326-21295372)
chr3 (168-206)||(26001141-26001179)
chr3 (91-137)||(37508921-37508967)
chr3 (91-137)||(51406673-51406719)
chr3 (91-207)||(5323220-5323337)
chr3 (126-207)||(8092602-8092683)
chr3 (175-224)||(10298063-10298112)
chr3 (88-137)||(19557136-19557185)
chr3 (88-137)||(49823465-49823514)
chr3 (91-147)||(2131746-2131802)
chr3 (89-137)||(36095764-36095812)
chr3 (167-223)||(45652067-45652123)
chr3 (126-190)||(49687902-49687966)
[»] chr2 (47 HSPs)
chr2 (87-228)||(44398679-44398820)
chr2 (90-225)||(41478638-41478773)
chr2 (90-223)||(37990012-37990145)
chr2 (87-228)||(44397540-44397681)
chr2 (90-222)||(3055557-3055689)
chr2 (91-222)||(15896841-15896972)
chr2 (91-221)||(13197710-13197840)
chr2 (91-223)||(15372224-15372356)
chr2 (89-224)||(13344481-13344616)
chr2 (89-222)||(38917520-38917653)
chr2 (90-221)||(6648518-6648649)
chr2 (91-226)||(16044317-16044452)
chr2 (90-221)||(37666609-37666740)
chr2 (91-221)||(12337937-12338067)
chr2 (90-206)||(9047754-9047870)
chr2 (90-222)||(16243782-16243914)
chr2 (90-217)||(41492895-41493022)
chr2 (89-207)||(30099180-30099298)
chr2 (105-222)||(4683946-4684063)
chr2 (94-193)||(44804581-44804680)
chr2 (1-87)||(2248061-2248147)
chr2 (98-207)||(12170406-12170515)
chr2 (94-202)||(16734802-16734910)
chr2 (143-207)||(31150667-31150731)
chr2 (131-190)||(41453090-41453149)
chr2 (101-206)||(1912832-1912937)
chr2 (91-224)||(13724102-13724235)
chr2 (90-223)||(23227271-23227404)
chr2 (125-207)||(36688896-36688978)
chr2 (101-206)||(23986793-23986898)
chr2 (106-207)||(36089457-36089558)
chr2 (150-206)||(4553069-4553125)
chr2 (90-150)||(15271053-15271113)
chr2 (175-227)||(37990007-37990059)
chr2 (175-223)||(41492894-41492942)
chr2 (121-207)||(10069237-10069323)
chr2 (106-172)||(11582647-11582713)
chr2 (90-204)||(15258790-15258904)
chr2 (175-224)||(3055642-3055691)
chr2 (88-137)||(4684016-4684065)
chr2 (105-150)||(15243989-15244034)
chr2 (90-147)||(37804324-37804381)
chr2 (89-137)||(3055556-3055604)
chr2 (175-223)||(6648517-6648565)
chr2 (175-223)||(9047753-9047801)
chr2 (89-137)||(15896840-15896888)
chr2 (175-223)||(41478637-41478685)
[»] chr8 (41 HSPs)
chr8 (88-223)||(2890159-2890294)
chr8 (89-223)||(54610-54744)
chr8 (90-223)||(7785777-7785910)
chr8 (91-221)||(6552655-6552785)
chr8 (90-223)||(7805698-7805831)
chr8 (90-222)||(43199353-43199485)
chr8 (90-221)||(39571202-39571333)
chr8 (90-221)||(44498186-44498317)
chr8 (91-221)||(3304278-3304408)
chr8 (88-222)||(25600997-25601131)
chr8 (90-222)||(12763653-12763785)
chr8 (90-222)||(32211362-32211494)
chr8 (91-223)||(33289261-33289393)
chr8 (90-221)||(32114474-32114605)
chr8 (97-221)||(12343146-12343270)
chr8 (90-222)||(13578856-13578988)
chr8 (90-221)||(15888351-15888482)
chr8 (91-221)||(31654613-31654743)
chr8 (90-221)||(7012171-7012302)
chr8 (90-221)||(8587170-8587301)
chr8 (89-218)||(28463614-28463743)
chr8 (159-225)||(4245649-4245715)
chr8 (98-207)||(24691986-24692094)
chr8 (105-207)||(17006925-17007027)
chr8 (105-207)||(17570220-17570322)
chr8 (90-172)||(27422239-27422321)
chr8 (89-223)||(33057592-33057726)
chr8 (107-158)||(35564706-35564757)
chr8 (175-225)||(15888348-15888398)
chr8 (92-138)||(30171483-30171529)
chr8 (167-207)||(27422266-27422306)
chr8 (106-206)||(28999063-28999163)
chr8 (90-137)||(12763738-12763785)
chr8 (164-207)||(13246808-13246851)
chr8 (167-222)||(25600999-25601054)
chr8 (91-141)||(8587170-8587220)
chr8 (91-137)||(31654613-31654659)
chr8 (96-141)||(28463616-28463661)
chr8 (175-224)||(39571200-39571249)
chr8 (175-223)||(7785776-7785824)
chr8 (89-137)||(43199438-43199486)
[»] chr6 (40 HSPs)
chr6 (86-221)||(6330115-6330250)
chr6 (88-222)||(11572142-11572276)
chr6 (91-223)||(8382969-8383101)
chr6 (91-222)||(2830334-2830465)
chr6 (90-221)||(26602323-26602454)
chr6 (89-223)||(13853591-13853725)
chr6 (90-222)||(8099529-8099661)
chr6 (88-223)||(6068564-6068699)
chr6 (90-223)||(33052793-33052926)
chr6 (90-221)||(9644696-9644827)
chr6 (90-221)||(9650713-9650844)
chr6 (89-222)||(35030999-35031132)
chr6 (91-206)||(8417793-8417908)
chr6 (91-222)||(6143553-6143684)
chr6 (88-205)||(28747131-28747248)
chr6 (129-221)||(13043758-13043850)
chr6 (91-191)||(17992018-17992118)
chr6 (88-221)||(22896471-22896595)
chr6 (88-207)||(3788050-3788170)
chr6 (91-206)||(7596977-7597092)
chr6 (126-207)||(6068975-6069056)
chr6 (88-207)||(14936454-14936573)
chr6 (89-203)||(3421571-3421685)
chr6 (106-202)||(6549902-6549997)
chr6 (88-192)||(5685368-5685472)
chr6 (90-149)||(3421645-3421704)
chr6 (90-137)||(8417877-8417924)
chr6 (87-137)||(2830331-2830381)
chr6 (175-225)||(8099614-8099664)
chr6 (100-138)||(14003076-14003114)
chr6 (165-206)||(3788111-3788152)
chr6 (89-146)||(7597052-7597109)
chr6 (175-224)||(9644780-9644829)
chr6 (175-224)||(9650797-9650846)
chr6 (94-147)||(14236697-14236750)
chr6 (106-158)||(290220-290272)
chr6 (89-137)||(8099528-8099576)
chr6 (91-147)||(8186441-8186497)
chr6 (89-137)||(11572229-11572277)
chr6 (175-223)||(26602407-26602455)
[»] chr4 (51 HSPs)
chr4 (88-223)||(3992974-3993109)
chr4 (91-221)||(46797725-46797855)
chr4 (91-223)||(47833609-47833741)
chr4 (90-223)||(48336261-48336394)
chr4 (88-221)||(53337370-53337503)
chr4 (91-223)||(3372119-3372251)
chr4 (91-221)||(6121893-6122023)
chr4 (91-221)||(20538686-20538816)
chr4 (89-221)||(24704370-24704502)
chr4 (91-223)||(42797730-42797862)
chr4 (88-222)||(3904680-3904814)
chr4 (90-207)||(33621810-33621927)
chr4 (91-228)||(51894582-51894719)
chr4 (90-222)||(47838616-47838748)
chr4 (91-225)||(43900545-43900679)
chr4 (91-227)||(7579304-7579440)
chr4 (89-221)||(52756675-52756807)
chr4 (90-221)||(5986876-5987007)
chr4 (92-222)||(40913190-40913320)
chr4 (90-224)||(41469765-41469899)
chr4 (90-207)||(3422075-3422191)
chr4 (105-222)||(26231576-26231693)
chr4 (110-222)||(33551200-33551312)
chr4 (91-207)||(41615676-41615792)
chr4 (90-207)||(17344227-17344344)
chr4 (106-206)||(50430433-50430533)
chr4 (91-222)||(29845644-29845769)
chr4 (130-207)||(25855097-25855174)
chr4 (126-206)||(31013036-31013116)
chr4 (91-158)||(4780358-4780425)
chr4 (167-221)||(4780371-4780425)
chr4 (100-206)||(43095230-43095336)
chr4 (91-147)||(1716301-1716357)
chr4 (91-147)||(44900080-44900136)
chr4 (149-207)||(17236845-17236904)
chr4 (90-141)||(17236868-17236919)
chr4 (90-137)||(43900548-43900595)
chr4 (88-138)||(25855080-25855130)
chr4 (175-221)||(42797816-42797862)
chr4 (96-162)||(45478151-45478217)
chr4 (131-212)||(6924724-6924804)
chr4 (88-137)||(33551198-33551247)
chr4 (88-137)||(40913273-40913322)
chr4 (175-223)||(3422144-3422192)
chr4 (102-138)||(6214354-6214390)
chr4 (167-207)||(24704446-24704486)
chr4 (88-136)||(26231574-26231622)
chr4 (167-207)||(32822285-32822325)
chr4 (175-223)||(41469764-41469812)
chr4 (110-202)||(41594673-41594765)
chr4 (175-223)||(47838615-47838663)
[»] chr7 (33 HSPs)
chr7 (91-221)||(23314139-23314269)
chr7 (90-223)||(1738446-1738579)
chr7 (90-223)||(7240747-7240880)
chr7 (91-224)||(46840857-46840990)
chr7 (88-223)||(9268754-9268889)
chr7 (90-222)||(7482224-7482356)
chr7 (90-222)||(38063912-38064044)
chr7 (89-224)||(1565727-1565862)
chr7 (91-221)||(31319399-31319529)
chr7 (91-223)||(22285697-22285829)
chr7 (90-221)||(36583395-36583526)
chr7 (90-222)||(28536750-28536882)
chr7 (91-221)||(94318-94448)
chr7 (91-221)||(38441460-38441590)
chr7 (91-221)||(36016196-36016326)
chr7 (90-222)||(4790247-4790379)
chr7 (97-205)||(33418392-33418500)
chr7 (91-224)||(9575406-9575539)
chr7 (98-207)||(40840126-40840235)
chr7 (98-206)||(7269412-7269520)
chr7 (88-207)||(7661090-7661209)
chr7 (91-148)||(7269478-7269535)
chr7 (88-207)||(7661073-7661192)
chr7 (90-137)||(22285698-22285745)
chr7 (98-149)||(29993251-29993302)
chr7 (91-137)||(36016280-36016326)
chr7 (90-119)||(12426528-12426557)
chr7 (126-206)||(14706710-14706791)
chr7 (88-137)||(38063997-38064046)
chr7 (175-223)||(1738445-1738493)
chr7 (175-223)||(7240833-7240881)
chr7 (89-137)||(7482223-7482271)
chr7 (175-223)||(7482309-7482357)
[»] chr1 (45 HSPs)
chr1 (91-223)||(27159358-27159490)
chr1 (91-223)||(44668093-44668225)
chr1 (90-224)||(14984834-14984968)
chr1 (91-221)||(31842795-31842925)
chr1 (91-221)||(39401966-39402096)
chr1 (91-224)||(11795930-11796063)
chr1 (94-222)||(9981646-9981774)
chr1 (91-223)||(26471065-26471197)
chr1 (89-221)||(47216697-47216829)
chr1 (90-228)||(1050881-1051019)
chr1 (90-222)||(34042695-34042827)
chr1 (91-221)||(47777481-47777611)
chr1 (90-223)||(12483627-12483760)
chr1 (90-223)||(47588336-47588469)
chr1 (97-221)||(44955212-44955336)
chr1 (88-207)||(25694333-25694452)
chr1 (111-221)||(23278021-23278131)
chr1 (90-207)||(17556766-17556884)
chr1 (90-207)||(47969708-47969826)
chr1 (90-222)||(11897053-11897185)
chr1 (91-222)||(16448108-16448239)
chr1 (91-206)||(11989796-11989911)
chr1 (101-222)||(12213484-12213605)
chr1 (89-221)||(37552141-37552273)
chr1 (100-207)||(12069500-12069607)
chr1 (89-147)||(16448182-16448240)
chr1 (98-207)||(12043618-12043726)
chr1 (90-147)||(21537943-21538000)
chr1 (91-207)||(37552141-37552257)
chr1 (90-224)||(11897053-11897187)
chr1 (103-187)||(571542-571625)
chr1 (87-135)||(12213560-12213608)
chr1 (106-172)||(1598397-1598461)
chr1 (165-223)||(12483626-12483684)
chr1 (98-156)||(17167768-17167826)
chr1 (88-137)||(9981644-9981693)
chr1 (129-198)||(11774536-11774605)
chr1 (129-194)||(31748358-31748423)
chr1 (175-224)||(34042780-34042829)
chr1 (106-147)||(45871217-45871258)
chr1 (175-223)||(14984921-14984969)
chr1 (165-221)||(19391948-19392004)
chr1 (122-206)||(21537900-21537984)
chr1 (90-186)||(30800460-30800556)
chr1 (175-207)||(44955220-44955252)
[»] scaffold0009 (2 HSPs)
scaffold0009 (91-226)||(49500-49635)
scaffold0009 (165-221)||(49579-49635)
[»] chr5 (33 HSPs)
chr5 (90-221)||(9395350-9395481)
chr5 (90-224)||(36563537-36563671)
chr5 (91-223)||(37148955-37149087)
chr5 (90-222)||(41989406-41989538)
chr5 (89-226)||(17025619-17025756)
chr5 (89-221)||(11795168-11795300)
chr5 (90-222)||(13103023-13103155)
chr5 (91-222)||(23359941-23360072)
chr5 (90-222)||(13033050-13033182)
chr5 (90-207)||(26350349-26350466)
chr5 (91-223)||(20848072-20848203)
chr5 (89-223)||(37641951-37642086)
chr5 (94-226)||(4443955-4444087)
chr5 (88-197)||(21575970-21576079)
chr5 (111-223)||(582987-583099)
chr5 (91-200)||(6126845-6126954)
chr5 (143-207)||(38361743-38361807)
chr5 (133-207)||(13539909-13539979)
chr5 (90-172)||(35904448-35904528)
chr5 (97-207)||(3549553-3549663)
chr5 (99-206)||(36595782-36595886)
chr5 (106-203)||(39290792-39290889)
chr5 (108-204)||(2629561-2629657)
chr5 (106-197)||(2366353-2366444)
chr5 (90-207)||(966162-966279)
chr5 (167-216)||(966224-966273)
chr5 (175-222)||(11795252-11795299)
chr5 (175-230)||(41989398-41989453)
chr5 (175-221)||(23360026-23360072)
chr5 (163-207)||(2366352-2366396)
chr5 (106-158)||(9006897-9006949)
chr5 (175-223)||(9395434-9395482)
chr5 (175-223)||(13103108-13103156)
[»] scaffold0482 (1 HSPs)
scaffold0482 (90-223)||(12858-12991)
[»] scaffold0204 (1 HSPs)
scaffold0204 (90-223)||(23783-23916)
[»] scaffold0464 (1 HSPs)
scaffold0464 (90-221)||(6130-6261)
[»] scaffold1707 (1 HSPs)
scaffold1707 (106-228)||(1328-1450)
[»] scaffold0011 (1 HSPs)
scaffold0011 (90-203)||(231302-231415)
[»] scaffold0650 (1 HSPs)
scaffold0650 (107-227)||(1-120)
[»] scaffold0415 (1 HSPs)
scaffold0415 (147-222)||(13782-13857)
[»] scaffold0003 (1 HSPs)
scaffold0003 (96-192)||(312747-312843)
[»] scaffold0063 (1 HSPs)
scaffold0063 (88-223)||(53338-53471)
[»] scaffold0017 (1 HSPs)
scaffold0017 (126-206)||(30042-30122)


Alignment Details
Target: chr3 (Bit Score: 152; Significance: 2e-80; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 234 - 393
Target Start/End: Complemental strand, 1281057 - 1280898
Alignment:
Q  234 gggtttgtatctaaaatttcaagctattattatgccttgttgcactgttttaatattatatttaagattaacattatgtgaagcttcaatttgggataat 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  1281057 gggtttgtatctaaaatttcaagctattattatgccttgttgcactgttttaatattatatttaagattaacattatgcgaagcttcaatttgggataac 1280958  T
Q  334 cggccgattttccagttggtttgatcttggttatattgcagtttggttgaaccggggttg 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1280957 cggccgattttccagttggtttgatcttggttatattgcagtttggttgaaccggggttg 1280898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 8437557 - 8437423
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  8437557 tatactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 8437458  T
Q  189 aaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||||| || ||||||||||||    
T  8437457 aaatttctcttataaataggaccggaggtagtatt 8437423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 89 - 222
Target Start/End: Original strand, 49823379 - 49823512
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49823379 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 49823478  T
Q  189 aaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||||| || |||||||||||    
T  49823479 aaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 10298110 - 10297979
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10298110 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 10298011  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  10298010 aatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 19557052 - 19557183
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 19557151  T
Q  191 atttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||| || |||||||||||    
T  19557152 atttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 22722064 - 22721929
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22722064 atatactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 22721965  T
Q  188 taaatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||||| || ||||||||||||    
T  22721964 taaatttctcttataaataggaccggaggtagtatt 22721929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 34080030 - 34080162
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaa 34080129  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  34080130 atttctcttataaataggaccggaggtagtatt 34080162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 8817385 - 8817520
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8817385 atactccttccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 8817484  T
Q  190 aatttctcttataaatagcactggaggtagtatttt 225  Q
    |||||||||||||||||| || | ||||||||||||    
T  8817485 aatttctcttataaataggaccgaaggtagtatttt 8817520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 48340527 - 48340397
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 48340428  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||| ||||||| || ||||||||||    
T  48340427 atttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 4238725 - 4238592
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4238725 atactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 4238626  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  4238625 aatttctcttataaataggaccggaggtagtatt 4238592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 40690995 - 40691128
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  40690995 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaaccta 40691094  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || |||| |||||||    
T  40691095 aatttctcttataaataggaccggagttagtatt 40691128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 91 - 224
Target Start/End: Original strand, 44785396 - 44785529
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||| ||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785396 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44785495  T
Q  191 atttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||||||| || |||||||||||||    
T  44785496 atttctcttataaataggaccggaggtagtattt 44785529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 51406806 - 51406673
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  51406806 atatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 51406707  T
Q  188 taaatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||||  || ||||||||||    
T  51406706 taaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 2787832 - 2787964
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2787832 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2787931  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || |||| |||||||    
T  2787932 atttctcttataaataggaccggagatagtatt 2787964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 88 - 224
Target Start/End: Original strand, 9111491 - 9111627
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  9111491 atatattccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacc 9111590  T
Q  188 taaatttctcttataaatagcactggaggtagtattt 224  Q
    |||||||||||||||||||| || | |||||||||||    
T  9111591 taaatttctcttataaataggaccgaaggtagtattt 9111627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 21295326 - 21295458
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaa 21295425  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  21295426 atttctcttataaataggaccggaggtagtatt 21295458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 37509053 - 37508921
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37509053 tatactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37508954  T
Q  189 aaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||||| || ||||| ||||    
T  37508953 aaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 38964522 - 38964390
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 38964423  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  38964422 atttctcttataaataggaccggaggtagtatt 38964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 17653843 - 17653712
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17653843 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 17653744  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||| ||||    
T  17653743 aatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 42507358 - 42507487
Alignment:
Q  94 tccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 193  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42507358 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatt 42507457  T
Q  194 tctcttataaatagcactggaggtagtatt 223  Q
    ||| |||||||||| || ||||||||||||    
T  42507458 tctattataaataggaccggaggtagtatt 42507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 89 - 222
Target Start/End: Complemental strand, 46208162 - 46208029
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  46208162 tatactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 46208063  T
Q  189 aaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||||| || ||||| |||||    
T  46208062 aaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 6013336 - 6013461
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6013336 tactccctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6013435  T
Q  191 atttctcttataaatagcactggagg 216  Q
    ||||||||||||||| | ||||||||    
T  6013436 atttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 36095679 - 36095811
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||| ||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36095679 atactcactccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 36095778  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    ||||| |||||||||||| || ||||| |||||    
T  36095779 aatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 42170346 - 42170478
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||| || |||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  42170346 tactccatctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaa 42170445  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||  || ||||||||||||    
T  42170446 atttctcttataaataagaccggaggtagtatt 42170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 35513603 - 35513487
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    ||||||||||| || ||||||||| |||||| ||  |||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35513603 tactccctccgatcctatttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 35513504  T
Q  191 atttctcttataaatag 207  Q
    |||||||||||||||||    
T  35513503 atttctcttataaatag 35513487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 33942930 - 33943048
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    ||||||| | ||| || ||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  33942930 tatactctcgccgatcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacct 33943029  T
Q  189 aaatttctcttataaatag 207  Q
    || ||||| ||||||||||    
T  33943030 aactttcttttataaatag 33943048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 34988205 - 34988089
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||| |  ||||||||||||| ||||||| ||||||||||||||    | ||| ||| ||  ||||||||||||| ||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaaagtggaccagatagatcaacttttgttgacccaa 34988106  T
Q  191 atttctcttataaatag 207  Q
    || ||||| ||||||||    
T  34988105 atgtctctaataaatag 34988089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 26019479 - 26019613
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||| |||| || ||||||||||||||  ||  |||||| |||||| || ||||| ||| |||||| |||| | ||||||| ||||| ||| ||| |    
T  26019479 atactccttccgatcctatttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaacttt-gttaaccca 26019577  T
Q  190 aatttctcttataaatagcactggaggtagtatttt 225  Q
    | |||||||||||||||| |||||||| ||||||||    
T  26019578 actttctcttataaatagaactggaggaagtatttt 26019613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 9213646 - 9213512
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||| ||| ||||||| |||||| |||  |||||||||| ||||| ||| | |||| ||| | |||||| ||||||  ||||||||||||  ||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaa 9213547  T
Q  191 atttctcttataaatagcactggaggtagtatttt 225  Q
    || ||| |||||||||| || ||||| ||||||||    
T  9213546 atgtcttttataaataggaccggagggagtatttt 9213512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 9213515 - 9213646
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||| |||  ||| ||||||||||||||||| ||||| |   ||  ||    ||||||||||  | |||||||||||||    
T  9213515 atactccctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatcaatttttgttgaccta 9213614  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    ||||||||| |||||||| || ||||| ||||    
T  9213615 aatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  166 aatacattcacttttgttgacctaaatttctcttataaatagcactggag 215  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 17653796 - 17653847
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatttta 226  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtatttta 17653847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 9027141 - 9027197
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatc 146  Q
    ||||||||||||||| ||||||||||| ||  ||| |||||||||||||||| ||||    
T  9027141 atactccctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 21917689 - 21917749
Alignment:
Q  126 gtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 186  Q
    |||||||||| || |||||||||||| ||||||||||||| || ||| | |||||||||||    
T  21917689 gtcaacaaaaattaatatatctagttcaaaattcagtccacatgcatcctcttttgttgac 21917749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 29285796 - 29285873
Alignment:
Q  127 tcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 206  Q
    |||||||||||| || ||| ||||| |||||| ||  || |||  ||||||||||||||||||||||| |||||||||||    
T  29285796 tcaacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 40691042 - 40690990
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattttat 227  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagtattttat 40690990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 45652068 - 45652128
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagt 150  Q
    ||||||||||| ||| |||||||||||||  ||||||||||||||| | ||| ||||||||    
T  45652068 atactccctccagtcctatttataagagacatttgagtcaacaaaaatggatgtatctagt 45652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 46208028 - 46208076
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||||||||||| |||||||||||||| |||  ||||||||||||    
T  46208028 tatactccctccggtcctatttataagagaaatttaggtcaacaaaagt 46208076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 8951954 - 8952009
Alignment:
Q  149 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 204  Q
    ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 34988072 - 34988131
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    ||||||||||| ||||| ||||||| |||||  |||| |||||||||||||||| |||||    
T  34988072 atatactcccttcggtcctatttattagagacatttgggtcaacaaaagttgatctatct 34988131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 37509005 - 37509052
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 42170477 - 42170430
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||| |||||||||||||||||||||||| |||  ||||||||||||    
T  42170477 atactacctccggtcttatttataagagaaatttaggtcaacaaaagt 42170430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 43323145 - 43323074
Alignment:
Q  136 gttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    |||||| ||| | |||||||||| | |||||||||||  ||||||||||||| || ||| ||||||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatag 43323074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 46208114 - 46208161
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||| ||||||||||||||| || ||||| |||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 17653712 - 17653758
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||    
T  17653712 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 17653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| ||||||||||||||| || ||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 26001141 - 26001179
Alignment:
Q  168 tacattcacttttgttgacctaaatttctcttataaata 206  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaata 26001179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 37508921 - 37508967
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||    
T  37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 37508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 51406673 - 51406719
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||| |||||||||||||||||||||||| |||  ||||||||||||    
T  51406673 tactacctccggtcttatttataagagaaatttaggtcaacaaaagt 51406719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 5323337 - 5323220
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagtt-aaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||| |  ||||||||||  || |||| |||||||||||||||| ||| | ||| ||||||||| | ||||||||||   ||||||||||  |    
T  5323337 tactccctccgatactatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgactca 5323238  T
Q  190 aatttctcttataaatag 207  Q
    | ||||| || |||||||    
T  5323237 attttcttttgtaaatag 5323220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 8092683 - 8092602
Alignment:
Q  126 gtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||| |||||||| ||||| |||||||||| |||| | ||||||  ||||| |||||   || ||||||||||||||||    
T  8092683 gtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaatag 8092602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 10298063 - 10298112
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 10298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 19557185 - 19557136
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  19557185 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 19557136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 49823514 - 49823465
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  49823514 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 49823465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 2131802 - 2131746
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    |||||||||||||| || |||| |||||  |||| |||||||||||||||| |||||    
T  2131802 tactccctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatct 2131746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 36095812 - 36095764
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||||||||||| ||||||||||| || |||  ||||||||||||    
T  36095812 tatactccctccggtcctatttataagataaatttaggtcaacaaaagt 36095764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 45652123 - 45652067
Alignment:
Q  167 atacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    |||||| || ||||||||||  |||| |||||||||||||| |||||||| ||||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatt 45652067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 49687966 - 49687902
Alignment:
Q  126 gtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||||| ||||||||| |||||| ||   ||||||||  ||||||||| ||||||    
T  49687966 gtcaacaaaagttgatttatctagtttaaaatttagataaaatacatcaacttttgtttacctaa 49687902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 44398820 - 44398679
Alignment:
Q  87 gatatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 186  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44398820 gatatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 44398721  T
Q  187 ctaaatttctcttataaatagcactggaggtagtattttatt 228  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  44398720 ctaaatttctcttataaataggaccggaggtagtatgttatt 44398679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 41478638 - 41478773
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41478638 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41478737  T
Q  190 aatttctcttataaatagcactggaggtagtatttt 225  Q
    |||||||||||||||||| || ||||||||||||||    
T  41478738 aatttctcttataaataggaccggaggtagtatttt 41478773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 37990012 - 37990145
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37990012 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37990111  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  37990112 aatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 87 - 228
Target Start/End: Complemental strand, 44397681 - 44397540
Alignment:
Q  87 gatatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 186  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44397681 gatatactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgac 44397582  T
Q  187 ctaaatttctcttataaatagcactggaggtagtattttatt 228  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  44397581 ctaaatttctcttataaataggaccggaggtagtatgttatt 44397540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 3055689 - 3055557
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3055689 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 3055590  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  3055589 aatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 15896972 - 15896841
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 15896873  T
Q  191 atttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||| || |||||||||||    
T  15896872 atttctcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 13197710 - 13197840
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 13197809  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  13197810 atttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 15372356 - 15372224
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaa 15372257  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| |||||||| ||||||    
T  15372256 atttctcttataaataggactggagggagtatt 15372224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 13344616 - 13344481
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  13344616 tatactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 13344517  T
Q  189 aaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||||||||| || |||||||||||||    
T  13344516 aaatttctcttataaatagaaccggaggtagtattt 13344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 89 - 222
Target Start/End: Original strand, 38917520 - 38917653
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  38917520 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 38917619  T
Q  189 aaatttctcttataaatagcactggaggtagtat 222  Q
    |||||| |||||||||||| || |||||||||||    
T  38917620 aaatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 6648518 - 6648649
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  6648518 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 6648617  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  6648618 aatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 16044317 - 16044452
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16044317 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaa 16044416  T
Q  191 atttctcttataaatagcactggaggtagtatttta 226  Q
    ||||||||||||||||| || |||||||||| ||||    
T  16044417 atttctcttataaataggaccggaggtagtaattta 16044452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 37666609 - 37666740
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  37666609 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 37666708  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  37666709 aatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 12337937 - 12338067
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 12338036  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    |||| |||||||||||| || ||||||||||    
T  12338037 atttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 90 - 206
Target Start/End: Original strand, 9047754 - 9047870
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  9047754 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgaccta 9047853  T
Q  190 aatttctcttataaata 206  Q
    |||||||||||||||||    
T  9047854 aatttctcttataaata 9047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 16243782 - 16243914
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16243782 atactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 16243881  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    ||||| |||||||||||| || |||| ||||||    
T  16243882 aatttttcttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 41492895 - 41493022
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgaccta 41492994  T
Q  190 aatttctcttataaatagcactggaggt 217  Q
    ||||||| |||||||||| |||| ||||    
T  41492995 aatttcttttataaataggactgaaggt 41493022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 30099180 - 30099298
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||    
T  30099180 tatactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacct 30099279  T
Q  189 aaatttctcttataaatag 207  Q
    |||||||||||||||||||    
T  30099280 aaatttctcttataaatag 30099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 4683946 - 4684063
Alignment:
Q  105 ttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 204  Q
    |||| ||||||||||||||  ||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4683946 ttatatataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 4684045  T
Q  205 tagcactggaggtagtat 222  Q
    ||| || |||||||||||    
T  4684046 taggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 44804581 - 44804680
Alignment:
Q  94 tccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 193  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804581 tccctccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2248061 - 2248147
Alignment:
Q  1 tattacaccgaacattgattatgcttcgaatttcgtaagagtcaattcgatcaaccaatttatcatctaaacaagacattttattcg 87  Q
    |||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2248061 tattacaccgaacaatgattatggttcgaatttcgtaagactcaattcgatcaaccaatttatcatctaaacaagacattttattcg 2248147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 12170406 - 12170515
Alignment:
Q  98 tccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 197  Q
    |||| |||||||||||||||||  ||| |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  12170406 tccgatcttatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctc 12170505  T
Q  198 ttataaatag 207  Q
    || |||||||    
T  12170506 ttgtaaatag 12170515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 16734910 - 16734802
Alignment:
Q  94 tccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 193  Q
    ||||||| ||| ||||||||||||||  |||||| ||||||||||||| ||| | ||||||||||||||||| ||||||  ||||||||||||| || ||    
T  16734910 tccctccagtcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactt 16734811  T
Q  194 tctcttata 202  Q
    |||||||||    
T  16734810 tctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 31150731 - 31150667
Alignment:
Q  143 tatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    |||||||||||||||| |||||||||||||  ||||||||||||  || ||||||||||||||||    
T  31150731 tatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaatag 31150667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  131 caaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    ||||||||||| ||| | ||||||||||||||||||||||||| |||||| |||||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 206
Target Start/End: Original strand, 1912832 - 1912937
Alignment:
Q  101 ggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 200  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||||| ||||||| | || | | ||||||  ||||||||||  | |||| | |||||    
T  1912832 ggtcttatttataagaaatatttgagtcaaaaaaagttgatatatctatttaaaaaattagactagatacatcaacttttgttgttccaaatatttctta 1912931  T
Q  201 taaata 206  Q
    ||||||    
T  1912932 taaata 1912937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 224
Target Start/End: Original strand, 13724102 - 13724235
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| |||||| ||||||  | |  |||||||||||||||| ||| | |||||||| |  | ||| ||||||  |||||||||||||  |    
T  13724102 tactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccaga 13724201  T
Q  191 atttctcttataaatagcactggaggtagtattt 224  Q
    || || ||||||||||| |||| ||| |||||||    
T  13724202 atatcgcttataaataggactgtagggagtattt 13724235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 23227271 - 23227404
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||||||| |||| ||||||||||| |  |||  ||||||||||  |||| |||||   ||| ||||  | ||||||||||  ||||||||||||| |    
T  23227271 atactccctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggaccaaatacatcaacttttgttgaccaa 23227370  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    ||| |||||||||||||| |||| ||| ||||||    
T  23227371 aatgtctcttataaataggactgaaggaagtatt 23227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 207
Target Start/End: Complemental strand, 36688978 - 36688896
Alignment:
Q  125 agtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||||||| ||||| ||||| ||| ||||||||| | | ||||||  || |||||||||| || ||||||||||||||||    
T  36688978 agtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaatag 36688896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 206
Target Start/End: Complemental strand, 23986898 - 23986793
Alignment:
Q  101 ggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 200  Q
    |||||||||||||||| |  ||||||||||||||| || || ||| ||||| ||||||  |  || | ||||| |||||| ||||  |||||||||||||    
T  23986898 ggtcttatttataagaaacatttgagtcaacaaaactttatgtatttagttcaaaatttggatcagaaacattaacttttattgatttaaatttctctta 23986799  T
Q  201 taaata 206  Q
    ||||||    
T  23986798 taaata 23986793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 36089558 - 36089457
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 205  Q
    |||||| ||||||  ||||||| || |||||||||| ||||||||| ||| ||     || |||| || |||||||||||||||||| ||||||||||||    
T  36089558 tatttagaagagatatttgagttaataaaagttgatgtatctagtttaaattttgaatcagatacgttaacttttgttgacctaaatatctcttataaat 36089459  T
Q  206 ag 207  Q
    ||    
T  36089458 ag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  150 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 206  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 15271053 - 15271113
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagt 150  Q
    |||||| ||||| ||||||||||||||||  |||||  |||||||||||||| ||||||||    
T  15271053 atactctctccgatcttatttataagagacatttgaagcaacaaaagttgatgtatctagt 15271113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 37990059 - 37990007
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattttat 227  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagtattttat 37990007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 41492942 - 41492894
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||||||||||||||||||| || ||||| ||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 41492894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 10069237 - 10069323
Alignment:
Q  121 tttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    |||||||||| ||||||| || ||||| |||||||| |  | | | ||||||| |||||||||||||||||| | ||||| ||||||    
T  10069237 tttgagtcaataaaagtttatgtatctggttaaaaaattggactagatacattaacttttgttgacctaaatatttcttaaaaatag 10069323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 11582647 - 11582713
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 172  Q
    ||||||||| ||  ||||||||||||||||||||||  |||||||| ||||||  | ||||||||||    
T  11582647 tatttataaaagggttttgagtcaacaaaagttgatgaatctagttcaaaatttggaccaaatacat 11582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 15258790 - 15258904
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||| ||||| |||||||||| | |||  ||||||||||||||| ||||| ||||||||  ||| ||    ||| | ||||| ||||||||||||| |    
T  15258790 atactctctccgatcttatttattaaagacgtttgagtcaacaaaaattgatgtatctagtctaaattttgaaccagacacattaacttttgttgaccca 15258889  T
Q  190 aatttctcttataaa 204  Q
    ||  |||||||||||    
T  15258890 aacatctcttataaa 15258904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 3055642 - 3055691
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 3055691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 4684065 - 4684016
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  4684065 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 4684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 15243989 - 15244034
Alignment:
Q  105 ttatttataagagaattttgagtcaacaaaagttgatatatctagt 150  Q
    ||||||||||||||  ||||| ||||||||||||||| ||||||||    
T  15243989 ttatttataagagatatttgaatcaacaaaagttgatgtatctagt 15244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 37804324 - 37804381
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    |||||||||||  | |||||||||| |||| ||||||||||||||| || ||||||||    
T  37804324 atactccctccaattttatttataaaagaaatttgagtcaacaaaaattaatatatct 37804381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 3055556 - 3055604
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  3055556 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 3055604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 6648565 - 6648517
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 6648517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 9047801 - 9047753
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 15896840 - 15896888
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  15896840 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 15896888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 41478685 - 41478637
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 41478637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 7e-59; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 2890159 - 2890294
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2890159 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 2890258  T
Q  188 taaatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||||| || ||||||||||||    
T  2890259 taaatttctcttataaataggaccggaggtagtatt 2890294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 54610 - 54744
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54610 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 54709  T
Q  189 aaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||||| || ||||||||||||    
T  54710 aaatttctcttataaataggaccggaggtagtatt 54744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 7785777 - 7785910
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7785777 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7785876  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  7785877 aatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 6552785 - 6552655
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6552686  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  6552685 atttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 7805698 - 7805831
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7805698 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7805797  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  7805798 aatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 43199353 - 43199485
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43199353 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 43199452  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  43199453 aatttctcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 39571202 - 39571333
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  39571202 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatcta 39571301  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  39571302 aatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 44498186 - 44498317
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44498186 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44498285  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  44498286 aatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 3304278 - 3304408
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304278 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3304377  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  3304378 atttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 88 - 222
Target Start/End: Original strand, 25600997 - 25601131
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25600997 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 25601096  T
Q  188 taaatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||||| |  |||||||||||    
T  25601097 taaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 12763653 - 12763785
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12763653 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12763752  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||  || |||||||||||    
T  12763753 aatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 32211362 - 32211494
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  32211362 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 32211461  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  32211462 aatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 33289261 - 33289393
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaa 33289360  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  33289361 atttctcttataaataggaccggaggtagtatt 33289393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 32114474 - 32114605
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32114474 atactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 32114573  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  32114574 aatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 12343146 - 12343270
Alignment:
Q  97 ctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 196  Q
    |||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  197 cttataaatagcactggaggtagta 221  Q
    ||||||||||| || ||||||||||    
T  12343246 cttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 13578988 - 13578856
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||| ||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  13578988 atactccatccagtcatatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgaccta 13578889  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| ||||||||||||||    
T  13578888 aatttctcttataaatagaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 15888351 - 15888482
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||| ||  ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  15888351 atactccctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 15888450  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  15888451 aatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 31654743 - 31654613
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||| ||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31654743 tacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31654644  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||| ||||    
T  31654643 atttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 7012302 - 7012171
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||| ||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||    
T  7012302 atacttcctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatcta 7012203  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  7012202 aatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 8587301 - 8587170
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||| ||||||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||| |||| ||||||||  ||||||||||||| |    
T  8587301 atacttcctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaa 8587202  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    | |||||||||||||||| || ||||| ||||    
T  8587201 actttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 28463743 - 28463614
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    ||||||||||||| || |||||||   ||||| ||| |||| | ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||     
T  28463743 tatactccctccgatcctatttattgcagaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgaccc 28463644  T
Q  189 aaatttctcttataaatagcactggaggta 218  Q
    || |||||||||||||||| || |||||||    
T  28463643 aactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 4245649 - 4245715
Alignment:
Q  159 cagtccaaatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatttt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatttt 4245715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 24691986 - 24692094
Alignment:
Q  98 tccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 197  Q
    ||||||| ||||| ||| |||| |||| |||||||||||||||||||||| ||| |||||||||| || ||||||  |||||||||||||||| ||| ||    
T  24691986 tccggtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggtt-aaaattcagttcagatacatcaacttttgttgacctaactttttc 24692084  T
Q  198 ttataaatag 207  Q
    ||||||||||    
T  24692085 ttataaatag 24692094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 17007027 - 17006925
Alignment:
Q  105 ttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 204  Q
    ||||||||||||||| ||| |||||| |||||||||| |||||  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||    
T  17007027 ttatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaa 17006928  T
Q  205 tag 207  Q
    |||    
T  17006927 tag 17006925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 17570220 - 17570322
Alignment:
Q  105 ttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 204  Q
    ||||||||||||||| ||| |||||| |||||||||| |||||  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||    
T  17570220 ttatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaa 17570319  T
Q  205 tag 207  Q
    |||    
T  17570320 tag 17570322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 27422321 - 27422239
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 172  Q
    ||||||||| ||||| |||||||||||||| |||| |||||||||| |  || ||||| ||||||||||||||||||||||||    
T  27422321 atactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaatacat 27422239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 33057726 - 33057592
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||| ||||||||||||||||||||||  ||  |||||||||| ||||| ||||| ||||||| |||| |||  |||||   | ||||||||| |     
T  33057726 tatactccatccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatcc 33057627  T
Q  189 aaatttctcttataaatagcactggaggtagtatt 223  Q
    || ||| |||||||||||| || ||||| ||||||    
T  33057626 aactttgtcttataaataggaccggagggagtatt 33057592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 35564706 - 35564757
Alignment:
Q  107 atttataagagaattttgagtcaacaaaagttgatatatctagttaaaaatt 158  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||| ||||||    
T  35564706 atttataagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 15888398 - 15888348
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatttt 225  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||||||    
T  15888398 acttttgttgacccaaaattctcttataaatagaactggagggagtatttt 15888348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 30171483 - 30171529
Alignment:
Q  92 actccctccggtcttatttataagagaattttgagtcaacaaaagtt 138  Q
    |||||||||| || |||||| ||||||||||||||||||||||||||    
T  30171483 actccctccgatcctatttacaagagaattttgagtcaacaaaagtt 30171529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 27422266 - 27422306
Alignment:
Q  167 atacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaatag 27422306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 28999063 - 28999163
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 205  Q
    |||||||| || || ||| |||||| ||||||| |  ||| ||||||||||||||||| | ||||||  | ||||||||||| || ||||| ||||||||    
T  28999063 tatttatatgaaaaatttaagtcaataaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaat 28999162  T
Q  206 a 206  Q
    |    
T  28999163 a 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 12763785 - 12763738
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||| |||||||||||||||||||||||| |||  ||||||||||||    
T  12763785 atactacctccggtcttatttataagagaaatttaggtcaacaaaagt 12763738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 13246851 - 13246808
Alignment:
Q  164 caaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    |||||||||||| ||||||||| | |||||||||||||||||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaatag 13246808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 25601054 - 25600999
Alignment:
Q  167 atacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||| ||||||||||||| ||| ||||||||||||||| || ||||| |||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 8587170 - 8587220
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgat 141  Q
    |||||||||||||| ||||||||||||||  ||  ||||||||||||||||    
T  8587170 tactccctccggtcctatttataagagaaagtttggtcaacaaaagttgat 8587220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 31654613 - 31654659
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||    
T  31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 31654659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 28463616 - 28463661
Alignment:
Q  96 cctccggtcttatttataagagaattttgagtcaacaaaagttgat 141  Q
    ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  28463616 cctccggtcctatttataagagaaagttgggtcaacaaaagttgat 28463661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 39571249 - 39571200
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 39571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 7785824 - 7785776
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 43199486 - 43199438
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  43199486 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 43199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 7e-59; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 6330250 - 6330115
Alignment:
Q  86 cgatatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttga 185  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6330250 cgatatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttga 6330151  T
Q  186 cctaaatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||||||| || ||||||||||    
T  6330150 cctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 88 - 222
Target Start/End: Original strand, 11572142 - 11572276
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11572142 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 11572241  T
Q  188 taaatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||||| || |||||||||||    
T  11572242 taaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 8382969 - 8383101
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 8383068  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  8383069 atttctcttataaataggaccggaggtagtatt 8383101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 2830465 - 2830334
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2830366  T
Q  191 atttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||| || |||||||||||    
T  2830365 atttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 26602454 - 26602323
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26602454 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26602355  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  26602354 aatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 13853591 - 13853725
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13853591 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 13853690  T
Q  189 aaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||||| || | ||||||||||    
T  13853691 aaatttctcttataaataggaccgaaggtagtatt 13853725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 8099661 - 8099529
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  8099661 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 8099562  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  8099561 aatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 6068699 - 6068564
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  6068699 atatactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacc 6068600  T
Q  188 taaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||| |||||||||||| || ||||||||||||    
T  6068599 taaatttttcttataaataggaccggaggtagtatt 6068564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 33052793 - 33052926
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||| ||||||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33052793 atactccatccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33052892  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  33052893 aatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 9644827 - 9644696
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  9644827 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9644728  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  9644727 aatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 9650844 - 9650713
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||    
T  9650844 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9650745  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  9650744 aatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 89 - 222
Target Start/End: Original strand, 35030999 - 35031132
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35030999 tatacttcctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 35031098  T
Q  189 aaatttctcttataaatagcactggaggtagtat 222  Q
    |||||| |||||||||||| || |||||||||||    
T  35031099 aaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 8417793 - 8417908
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 8417892  T
Q  191 atttctcttataaata 206  Q
    ||||||||||||||||    
T  8417893 atttctcttataaata 8417908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 6143684 - 6143553
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||| ||||||  ||||||||||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  6143684 tactccttccggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 6143585  T
Q  191 atttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||| |  |||||||||||    
T  6143584 atttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 28747131 - 28747248
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||| | ||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |    
T  28747131 atatactcccttcagtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatc 28747230  T
Q  188 taaatttctcttataaat 205  Q
    ||||||||||||||||||    
T  28747231 taaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  129 aacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 91 - 191
Target Start/End: Complemental strand, 17992118 - 17992018
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||| | ||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  17992118 tactcccttcggtcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaa 17992019  T
Q  191 a 191  Q
    |    
T  17992018 a 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 22896595 - 22896471
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    |||||||||| |||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||         ||||||||    
T  22896595 atatactcccgccggtcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgacc 22896505  T
Q  188 taaatttctcttataaatagcactggaggtagta 221  Q
    |||| ||||||||||||||| || ||||| ||||    
T  22896504 taaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 3788170 - 3788050
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttg-ttgac 186  Q
    ||||||||||||||||||||||||||||| || |||  |||||||||||||||| ||| ||||||| ||||||||||| || ||   | ||||| |||||    
T  3788170 atatactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtccacatccaacaaattttgattgac 3788071  T
Q  187 ctaaatttctcttataaatag 207  Q
    | || ||||||||||||||||    
T  3788070 ccaactttctcttataaatag 3788050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 7596977 - 7597092
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    ||||||||||  || |||||||| ||||| |||||||||| |||||||||| ||| |||||||||||||||| |  ||||||  ||||||||| ||  ||    
T  7596977 tactccctccaatcctatttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaa 7597076  T
Q  191 atttctcttataaata 206  Q
     |||||||||||||||    
T  7597077 ctttctcttataaata 7597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 6068975 - 6069056
Alignment:
Q  126 gtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||||||| |||  |||| ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||    
T  6068975 gtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaatag 6069056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 14936454 - 14936573
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    |||||||||||| |||| ||| || |||| |  |||  ||||||||||| |||| ||||||||||| ||||   |||||||||||  ||| |||||||||    
T  14936454 atatactccctctggtcctatatagaagaaacatttaggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacc 14936553  T
Q  188 taaatttctcttataaatag 207  Q
     |||| ||||||||||||||    
T  14936554 caaatatctcttataaatag 14936573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 3421571 - 3421685
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||| | | | ||||||||||| || |||||||||||||||||||||||||||  ||||||| ||| || | ||| ||  ||||||||||||      
T  3421571 tatactcccttcagccatatttataagaaaaatttgagtcaacaaaagttgatatatcttattaaaaaatcaatctagatatatcaacttttgttgactc 3421670  T
Q  189 aaatttctcttataa 203  Q
    || |||| |||||||    
T  3421671 aactttcacttataa 3421685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 6549997 - 6549902
Alignment:
Q  106 tatttataagaga-attttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 202  Q
    ||||||||||||| |||||| || ||||||||||||| ||||||||  ||| ||   || ||||||||| ||||||||||||||||||||||||||||    
T  6549997 tatttataagagatattttg-gttaacaaaagttgatgtatctagtccaaattttcatc-aaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 5685472 - 5685368
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||| || |||||||||||||||| |  |||| |||| |||||  |||| || || ||||| ||||  ||||||||||||  |||||||||||||    
T  5685472 atatactccatctggtcttatttataagaaacatttgggtcagcaaaatatgatgtaacttgttaataatttggtccaaatacatcaacttttgttgacc 5685373  T
Q  188 taaat 192  Q
     ||||    
T  5685372 caaat 5685368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 3421704 - 3421645
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctag 149  Q
    |||||||||  |||| || ||||||| |||  ||||||||||||||||||||||||||||    
T  3421704 atactcccttaggtcctacttataagtgaaagttgagtcaacaaaagttgatatatctag 3421645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 8417924 - 8417877
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||||| ||||||||||||||||||| |||  ||||||||||||    
T  8417924 atactccctctggtcttatttataagagaaatttaggtcaacaaaagt 8417877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 2830331 - 2830381
Alignment:
Q  87 gatatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  2830331 gatatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 2830381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 8099614 - 8099664
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatttt 225  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagtatttt 8099664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 14003114 - 14003076
Alignment:
Q  100 cggtcttatttataagagaattttgagtcaacaaaagtt 138  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  14003114 cggtcttatttataagagacatttgagtcaacaaaagtt 14003076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 3788111 - 3788152
Alignment:
Q  165 aaatacattcacttttgttgacctaaatttctcttataaata 206  Q
    ||||||||  |||||||||||||||||||| |||||||||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaata 3788152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 7597109 - 7597052
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatc 146  Q
    ||||||||||||  |||||||||||||||||  ||| || ||||||||||||| ||||    
T  7597109 tatactccctccaatcttatttataagagaaagttgtgttaacaaaagttgatgtatc 7597052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 9644780 - 9644829
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9644829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 9650797 - 9650846
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagtattt 9650846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 14236750 - 14236697
Alignment:
Q  94 tccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    |||||||  |||| ||||||||||||  |||||||||||||||||||| |||||    
T  14236750 tccctccaatcttgtttataagagaaagttgagtcaacaaaagttgatgtatct 14236697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 290272 - 290220
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaatt 158  Q
    |||||||||||||  ||||||| ||||||| |||||||||||| || ||||||    
T  290272 tatttataagagatatttgagtaaacaaaatttgatatatctaattcaaaatt 290220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 8099528 - 8099576
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  8099528 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 8099576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 8186497 - 8186441
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    ||||||| |||||| ||||||||| |||| ||||  ||||||||||||||| |||||    
T  8186497 tactccccccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatct 8186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 11572277 - 11572229
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  11572277 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 11572229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 26602407 - 26602455
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 26602455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 7e-59; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 3993109 - 3992974
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3993109 atatactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 3993010  T
Q  188 taaatttctcttataaatagcactggaggtagtatt 223  Q
     ||||||||||||||||||| || ||||||||||||    
T  3993009 gaaatttctcttataaataggaccggaggtagtatt 3992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 46797855 - 46797725
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46797756  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  46797755 atttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 47833741 - 47833609
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 47833642  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  47833641 atttctcttataaataggaccggaggtagtatt 47833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 48336394 - 48336261
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48336394 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 48336295  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  48336294 aatttctcttataaataggaccggaggtagtatt 48336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 53337503 - 53337370
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  53337503 atatactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 53337404  T
Q  188 taaatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||||| || ||||||||||    
T  53337403 taaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 3372251 - 3372119
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372251 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3372152  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  3372151 atttctcttataaataggaccggaggtagtatt 3372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 6121893 - 6122023
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 6121992  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  6121993 atttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 20538686 - 20538816
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 20538785  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  20538786 atttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 24704502 - 24704370
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  24704502 tatactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 24704403  T
Q  189 aaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||||| || ||||||||||    
T  24704402 aaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 42797862 - 42797730
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 42797763  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||| |||| || ||||||||||||    
T  42797762 atttctcttatatataggaccggaggtagtatt 42797730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 88 - 222
Target Start/End: Original strand, 3904680 - 3904814
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  3904680 atatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacc 3904779  T
Q  188 taaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||| |||||||||| || |||||||||||    
T  3904780 taaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 33621927 - 33621810
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33621927 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33621828  T
Q  190 aatttctcttataaatag 207  Q
    ||||||||||||||||||    
T  33621827 aatttctcttataaatag 33621810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 91 - 228
Target Start/End: Original strand, 51894582 - 51894719
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaa 51894681  T
Q  191 atttctcttataaatagcactggaggtagtattttatt 228  Q
    |||| |||||||||||| || |||||||||||| ||||    
T  51894682 atttttcttataaataggaccggaggtagtattatatt 51894719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 47838616 - 47838748
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  47838616 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccga 47838715  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| |  |||||||||||    
T  47838716 aatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 43900679 - 43900545
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||| ||||||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaa 43900580  T
Q  191 atttctcttataaatagcactggaggtagtatttt 225  Q
    ||||||||||||||||| || ||||| ||||||||    
T  43900579 atttctcttataaataggaccggagggagtatttt 43900545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 7579440 - 7579304
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||| ||||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  7579440 tacttcctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaa 7579341  T
Q  191 atttctcttataaatagcactggaggtagtattttat 227  Q
    ||||||||||||||||| || ||||||||||| ||||    
T  7579340 atttctcttataaataggaccggaggtagtatattat 7579304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 52756807 - 52756675
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  52756807 tatactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacct 52756708  T
Q  189 aaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||||| || |||| |||||    
T  52756707 aaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 5987007 - 5986876
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  5987007 atactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgaccta 5986908  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
     ||||||||||||||||| |  ||||||||||    
T  5986907 tatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 40913190 - 40913320
Alignment:
Q  92 actccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaa 191  Q
    ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  40913190 actccctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaa 40913289  T
Q  192 tttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||| || ||||| |||||    
T  40913290 tttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 90 - 224
Target Start/End: Original strand, 41469765 - 41469899
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  41469765 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 41469864  T
Q  190 aatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||| |||||||||| || | ||| |||||||    
T  41469865 aatttcttttataaataggaccgaaggaagtattt 41469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 3422191 - 3422075
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||    
T  3422191 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgaccta 3422093  T
Q  190 aatttctcttataaatag 207  Q
    ||||||||||||||||||    
T  3422092 aatttctcttataaatag 3422075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 105 - 222
Target Start/End: Complemental strand, 26231693 - 26231576
Alignment:
Q  105 ttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 204  Q
    |||| ||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26231693 ttatatataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaa 26231594  T
Q  205 tagcactggaggtagtat 222  Q
    ||| || |||||||||||    
T  26231593 taggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 33551312 - 33551200
Alignment:
Q  110 tataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagca 209  Q
    ||||||||||||||| ||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaatagga 33551213  T
Q  210 ctggaggtagtat 222  Q
    | |||||||||||    
T  33551212 ccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 41615676 - 41615792
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||| ||||||| ||||||||||||||  |||  ||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  41615676 tactccatccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaa 41615775  T
Q  191 atttctcttataaatag 207  Q
     ||||||||||||||||    
T  41615776 ttttctcttataaatag 41615792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 17344344 - 17344227
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||||||||  ||||||||||||||||| ||||  ||||||||||||||| ||||   ||||||||||||| || ||||||  |||||||||||  ||    
T  17344344 atactccctccaatcttatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgattta 17344245  T
Q  190 aatttctcttataaatag 207  Q
    | ||||||||||||||||    
T  17344244 actttctcttataaatag 17344227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 50430433 - 50430533
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 205  Q
    ||||||||||| |  |||| |||||||||| ||||| ||||| |||||||||||| |||||||||||  ||||||||||||| || || |||||||||||    
T  50430433 tatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaat 50430532  T
Q  206 a 206  Q
    |    
T  50430533 a 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 29845769 - 29845644
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagtt-gatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||||||||||| ||||||||||||      |  |||||||||||| ||| ||| |||||||||||||||| |||||| ||| | |||||||||||||    
T  29845769 tactccctccggtcctatttataagag------ggatcaacaaaagtttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgaccta 29845677  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||| ||| |||| ||| |||||    
T  29845676 aatttctcttataagtaggactgaagggagtat 29845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 207
Target Start/End: Complemental strand, 25855174 - 25855097
Alignment:
Q  130 acaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    |||||||| ||| ||| | ||||||||||||||||||||||||| ||||||||||||  || ||||||| ||||||||    
T  25855174 acaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaatag 25855097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 31013116 - 31013036
Alignment:
Q  126 gtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 206  Q
    ||||||||||| |||| ||||||||||| |||| |  ||||||||||  ||||||||||| |||||| ||| |||||||||    
T  31013116 gtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 4780425 - 4780358
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaatt 158  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||| || |||||  |||||||||    
T  4780425 tactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaatt 4780358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  167 atacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 221  Q
    ||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 206
Target Start/End: Original strand, 43095230 - 43095336
Alignment:
Q  100 cggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctt 199  Q
    |||||||||||||||||||  |||| | |||||||| || || ||| | ||| ||||||  | ||| ||||||| | |||||||||| ||||| ||||||    
T  43095230 cggtcttatttataagagacgtttgggccaacaaaaattaatgtatatggttcaaaatttggaccagatacattaatttttgttgacttaaatatctctt 43095329  T
Q  200 ataaata 206  Q
    |||||||    
T  43095330 ataaata 43095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 1716301 - 1716357
Alignment:
Q  91 tactccctccggtcttatttataagaga-attttgagtcaacaaaagttgatatatct 147  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||||| |||||    
T  1716301 tactccctccggtcttatttataagagataatttg-gtcaacaaaagttgatgtatct 1716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 44900080 - 44900136
Alignment:
Q  91 tactccctccggtcttatttataagaga-attttgagtcaacaaaagttgatatatct 147  Q
    |||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||    
T  44900080 tactccctccggtcctatttataagagatattctg-gtcaacaaaagttgatatatct 44900136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 17236845 - 17236904
Alignment:
Q  149 gttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaatag 17236904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 17236919 - 17236868
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgat 141  Q
    |||||| |||||||| ||||||||||| || |||| ||||||||||||||||    
T  17236919 atactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgat 17236868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 43900548 - 43900595
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||||||||||| |||||||||||||| |||  ||||||||||||    
T  43900548 atactccctccggtcctatttataagagaaatttaggtcaacaaaagt 43900595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 25855080 - 25855130
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagtt 138  Q
    |||||||||||| |||| ||||||| ||||||  |||||||||||||||||    
T  25855080 atatactccctcaggtcctatttatgagagaaagttgagtcaacaaaagtt 25855130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| ||||||||||||||| || ||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 45478217 - 45478151
Alignment:
Q  96 cctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagt 162  Q
    |||||| || |||||||||||||| | || ||||| |||||||||| ||||  ||||||||||||||    
T  45478217 cctccgatcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagt 45478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 6924724 - 6924804
Alignment:
Q  131 caaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagcactg 212  Q
    |||||||||||  ||||  || |||||| || ||||||||||| |||||||||||||||| ||| ||||||| |||| ||||    
T  6924724 caaaagttgatgcatctgattcaaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggactg 6924804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 33551198 - 33551247
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  33551198 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 33551247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 40913322 - 40913273
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||||||||||||| |||||||||||||| |||   |||||||||||    
T  40913322 atatactccctccggtcctatttataagagaaatttagatcaacaaaagt 40913273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 3422144 - 3422192
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 3422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 6214390 - 6214354
Alignment:
Q  102 gtcttatttataagagaattttgagtcaacaaaagtt 138  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  6214390 gtcttatttataaaagaattttaagtcaacaaaagtt 6214354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 24704446 - 24704486
Alignment:
Q  167 atacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||| ||||||||||||| ||| |||||||||||||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaatag 24704486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 26231574 - 26231622
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaag 136  Q
    ||||||| ||||||||| |||||||||||||| |||  |||||||||||    
T  26231574 atatactacctccggtcctatttataagagaaatttaggtcaacaaaag 26231622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  167 atacattcacttttgttgacctaaatttctcttataaatag 207  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 41469812 - 41469764
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 41469764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 41594765 - 41594673
Alignment:
Q  110 tataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 202  Q
    ||||||||||  ||| ||||||  |||||||| ||||| ||| ||||||  | ||| ||||||  ||||||||||||| || |||||||||||    
T  41594765 tataagagaaagttgggtcaacttaagttgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 47838663 - 47838615
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagtatt 47838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 23314139 - 23314269
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23314238  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  23314239 atttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 1738446 - 1738579
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1738446 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 1738545  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  1738546 aatttctcttataaataggaccggaggtagtatt 1738579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 7240880 - 7240747
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7240880 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7240781  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  7240780 aatttctcttataaataggaccggaggtagtatt 7240747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 91 - 224
Target Start/End: Complemental strand, 46840990 - 46840857
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46840891  T
Q  191 atttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||||||| || |||||||||||||    
T  46840890 atttctcttataaataggaccggaggtagtattt 46840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 88 - 223
Target Start/End: Complemental strand, 9268889 - 9268754
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9268889 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacc 9268790  T
Q  188 taaatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||||| ||  |||||||||||    
T  9268789 taaatttctcttataaataggaccagaggtagtatt 9268754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 7482356 - 7482224
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  7482356 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 7482257  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  7482256 aatttctcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 38063912 - 38064044
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38063912 atactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 38064011  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  38064012 aatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 1565727 - 1565862
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||| ||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1565727 tatactcccttcggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 1565826  T
Q  189 aaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||||||||| || |||||||||||||    
T  1565827 aaatttctcttataaataggaccggaggtagtattt 1565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 31319399 - 31319529
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31319498  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  31319499 atttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 22285829 - 22285697
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 22285730  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||| ||||||    
T  22285729 atttctcttataaataggaccggagggagtatt 22285697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 36583526 - 36583395
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36583526 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgaccta 36583427  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  36583426 aatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 28536750 - 28536882
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| |||||||||||||||||||  |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28536750 atactccctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgaccta 28536849  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  28536850 aatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 94318 - 94448
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    ||||||||||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  94318 tactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaa 94417  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || |||| |||||    
T  94418 atttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 38441590 - 38441460
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||    
T  38441590 tacttcctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataa 38441491  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  38441490 atttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 36016196 - 36016326
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||| || |||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  36016196 tactccatctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 36016295  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||| ||||    
T  36016296 atttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 4790379 - 4790247
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||| ||||||||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  4790379 atacttcctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgaccta 4790280  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    ||||| |||||||||||| || |||||||||||    
T  4790279 aatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 97 - 205
Target Start/End: Complemental strand, 33418500 - 33418392
Alignment:
Q  97 ctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 196  Q
    |||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 33418401  T
Q  197 cttataaat 205  Q
    |||| ||||    
T  33418400 cttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 224
Target Start/End: Complemental strand, 9575539 - 9575406
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||| ||||| ||||||||||||||  ||  |||||||||| ||||| ||||||||||||||||||||| |||||| || ||||||||||||| ||    
T  9575539 tactcccttcggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaa 9575440  T
Q  191 atttctcttataaatagcactggaggtagtattt 224  Q
     ||||||||| |||||| ||  |||| |||||||    
T  9575439 ctttctcttacaaataggaccagagggagtattt 9575406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 207
Target Start/End: Original strand, 40840126 - 40840235
Alignment:
Q  98 tccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 197  Q
    ||||||| |||||||||||||| |||  |||||||||||||||| ||  ||||||||||||||||||||||||||| | ||||||| || ||| ||||||    
T  40840126 tccggtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctc 40840225  T
Q  198 ttataaatag 207  Q
    || |||||||    
T  40840226 ttctaaatag 40840235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 206
Target Start/End: Original strand, 7269412 - 7269520
Alignment:
Q  98 tccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 197  Q
    ||||||| ||||||||||||||  ||| || |||||||||||||  |||| ||||||||||||||  | ||||||  | ||||||||||| || ||| ||    
T  7269412 tccggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttc 7269511  T
Q  198 ttataaata 206  Q
    |||||||||    
T  7269512 ttataaata 7269520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 7661209 - 7661090
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    |||||||||||| |||| |||||||| ||||  |||| |||||||||||||||| ||||||||  ||  ||    |||  |||||  |||||| |||||     
T  7661209 atatactccctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgaca 7661110  T
Q  188 taaatttctcttataaatag 207  Q
    ||||||||||||||||||||    
T  7661109 taaatttctcttataaatag 7661090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 7269535 - 7269478
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatcta 148  Q
    |||||||||||||||||||||||||| ||  ||| |||||||||| ||||| ||||||    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatcta 7269478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 7661073 - 7661192
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||| || || |||||||||||||| |||  ||||| |||||||||| || || || ||||| |  | | | ||||||  |||||||||||||    
T  7661073 atatactcccttcgatcctatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgttgacc 7661172  T
Q  188 taaatttctcttataaatag 207  Q
     |||| |||| |||||||||    
T  7661173 caaatgtctcatataaatag 7661192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 22285698 - 22285745
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||||||||||| |||||||||||||| |||  ||||||||||||    
T  22285698 atactccctccggtcctatttataagagaaatttaggtcaacaaaagt 22285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 29993251 - 29993302
Alignment:
Q  98 tccggtcttatttataagagaattttgagtcaacaaaagttgatatatctag 149  Q
    ||||||| ||||| ||||||||| ||| ||||||||||||| ||||||||||    
T  29993251 tccggtcctatttgtaagagaatgttgggtcaacaaaagttaatatatctag 29993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 36016326 - 36016280
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||    
T  36016326 tactccctccggtcctatttataagagaaatttaggtcaacaaaagt 36016280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 119
Target Start/End: Original strand, 12426528 - 12426557
Alignment:
Q  90 atactccctccggtcttatttataagagaa 119  Q
    ||||||||||||||||||||||||||||||    
T  12426528 atactccctccggtcttatttataagagaa 12426557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 14706791 - 14706710
Alignment:
Q  126 gtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa-atttctcttataaata 206  Q
    ||||||||||||||||||||||  |||| |||||| | || ||||||  ||||||||| ||||||  ||| |||||||||||    
T  14706791 gtcaacaaaagttgatatatctgattaacaattcaattcagatacatcaacttttgttaacctaatttttttcttataaata 14706710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 38064046 - 38063997
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  38064046 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 38063997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 1738493 - 1738445
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 1738445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 7240833 - 7240881
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7240881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 7482223 - 7482271
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    |||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  7482223 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 7482271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 7482309 - 7482357
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 7482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 27159358 - 27159490
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 27159457  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  27159458 atttctcttataaataggaccggaggtagtatt 27159490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 44668093 - 44668225
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44668192  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  44668193 atttctcttataaataggaccggaggtagtatt 44668225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 90 - 224
Target Start/End: Complemental strand, 14984968 - 14984834
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14984968 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 14984869  T
Q  190 aatttctcttataaatagcactggaggtagtattt 224  Q
    |||||||||||||||||| || |||| ||||||||    
T  14984868 aatttctcttataaataggaccggagatagtattt 14984834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 31842795 - 31842925
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31842894  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  31842895 atttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 39401966 - 39402096
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 39402065  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || ||||||||||    
T  39402066 atttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 91 - 224
Target Start/End: Complemental strand, 11796063 - 11795930
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaa 11795964  T
Q  191 atttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||||||| || |||||||||||||    
T  11795963 atttctcttataaataggaccggaggtagtattt 11795930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 94 - 222
Target Start/End: Complemental strand, 9981774 - 9981646
Alignment:
Q  94 tccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 193  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981774 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 9981675  T
Q  194 tctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||| || |||||||||||    
T  9981674 tctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 26471065 - 26471197
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26471164  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  26471165 atttctcttataaataggaccggaggtagtatt 26471197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 47216697 - 47216829
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47216697 tatactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 47216796  T
Q  189 aaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||||| || ||||||||||    
T  47216797 aaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 90 - 228
Target Start/End: Complemental strand, 1051019 - 1050881
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  1051019 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgaccta 1050920  T
Q  190 aatttctcttataaatagcactggaggtagtattttatt 228  Q
    |||||||||||||||||| || |||||||||| ||||||    
T  1050919 aatttctcttataaataggaccggaggtagtaatttatt 1050881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 34042827 - 34042695
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  34042827 atactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 34042728  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || |||||||||||    
T  34042727 aatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 47777481 - 47777611
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaa 47777580  T
Q  191 atttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||| || || |||||||    
T  47777581 atttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 12483627 - 12483760
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  12483627 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgaccta 12483726  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  12483727 aatttctcttataaataggaccggaggtagtatt 12483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 90 - 223
Target Start/End: Original strand, 47588336 - 47588469
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  47588336 atactcccttcggttttatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgaccta 47588435  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||  ||  |||||||||||    
T  47588436 aatttctcttataaataagaccagaggtagtatt 47588469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 44955212 - 44955336
Alignment:
Q  97 ctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 196  Q
    |||||||| ||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  197 cttataaatagcactggaggtagta 221  Q
    ||||||||||| || ||||||||||    
T  44955312 cttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 88 - 207
Target Start/End: Complemental strand, 25694452 - 25694333
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |    
T  25694452 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatc 25694353  T
Q  188 taaatttctcttataaatag 207  Q
    ||||||||||||||||||||    
T  25694352 taaatttctcttataaatag 25694333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 23278021 - 23278131
Alignment:
Q  111 ataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagcac 210  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 23278120  T
Q  211 tggaggtagta 221  Q
     ||||||||||    
T  23278121 cggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 17556884 - 17556766
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaataca-ttcacttttgttgacct 188  Q
    ||||||||||||||| ||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  17556884 atactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacct 17556785  T
Q  189 aaatttctcttataaatag 207  Q
    || ||||||||||||||||    
T  17556784 aactttctcttataaatag 17556766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 47969826 - 47969708
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||| | |||||||  ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||    
T  47969826 atactccctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgaccta 47969727  T
Q  190 aatttctc-ttataaatag 207  Q
    |||||||| ||||||||||    
T  47969726 aatttctctttataaatag 47969708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 11897185 - 11897053
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||  |||||||||||||| || ||||||  |||||||||||||||    
T  11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgaccta 11897086  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    | |||||||||||||||| || ||||| |||||    
T  11897085 actttctcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 16448108 - 16448239
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    ||||| ||||||||||||||||| | |||| ||| ||||||||||||| || ||||| ||| ||||||||||||| ||||||  ||||||||||||| ||    
T  16448108 tactcactccggtcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaa 16448207  T
Q  191 atttctcttataaatagcactggaggtagtat 222  Q
     |||||||||||||||| || ||||| |||||    
T  16448208 ctttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 11989911 - 11989796
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||| |||| |||||||||| |||| ||||| ||| | ||||||||||||||||||||| |||   ||||||||||| ||    
T  11989911 tactccctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaa 11989812  T
Q  191 atttctcttataaata 206  Q
     |||||||||||||||    
T  11989811 ctttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 12213484 - 12213605
Alignment:
Q  101 ggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 200  Q
    |||| ||||||| ||||||  ||| |||||||||| ||||| ||| |||||||||||||| || ||||||||| | ||||||||||||||  ||||||||    
T  12213484 ggtcctatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctctta 12213583  T
Q  201 taaatagcactggaggtagtat 222  Q
    ||||||  |||||||| |||||    
T  12213584 taaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 37552273 - 37552141
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    ||||||||| |||||| |||||||||||||| |||| |||||||||| |  || ||||| ||||||||||||||||| ||||||  ||| ||||||||      
T  37552273 tatactccccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactc 37552174  T
Q  189 aaatttctcttataaatagcactggaggtagta 221  Q
    || ||| |||||||||||| || ||||| ||||    
T  37552173 aactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 207
Target Start/End: Complemental strand, 12069607 - 12069500
Alignment:
Q  100 cggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctt 199  Q
    ||||||||||||||||||||  ||||||  | |||||||||| ||||  ||||||||||||||| ||||||||  | ||||||| ||  || |||||||     
T  12069607 cggtcttatttataagagaaaattgagttgataaaagttgatttatcaggttaaaaattcagtctaaatacataaatttttgttaactcaactttctctc 12069508  T
Q  200 ataaatag 207  Q
    ||||||||    
T  12069507 ataaatag 12069500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 16448240 - 16448182
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    |||||||||||||||| ||||||||||||||  ||| |||||||||||||||| |||||    
T  16448240 tatactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 207
Target Start/End: Complemental strand, 12043726 - 12043618
Alignment:
Q  98 tccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 197  Q
    ||||||| ||||||||||| || ||| | ||||||||| || || ||||| |||||||||| | | |||||||||  |||||||||||| ||||| |||     
T  12043726 tccggtcctatttataagaaaaatttaaatcaacaaaaattaatgtatcttgttaaaaattgaat-caaatacatcaacttttgttgacttaaatatctt 12043628  T
Q  198 ttataaatag 207  Q
    ||||||||||    
T  12043627 ttataaatag 12043618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 21538000 - 21537943
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||||||||| |||||    
T  21538000 atactctctccgatcttatttataagagaaaattgagtcaacaaaagttgatgtatct 21537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 37552141 - 37552257
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||| ||  |||||||||||| |||| || ||||| |    || ||    ||| ||||||||| ||||||||||| ||    
T  37552141 tactccctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaa 37552240  T
Q  191 atttctcttataaatag 207  Q
    |||||||||||||||||    
T  37552241 atttctcttataaatag 37552257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 224
Target Start/End: Original strand, 11897053 - 11897187
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatct-agttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    ||||||||||||||| ||||||||||||||  ||  |||||||||||||||| ||||| |  | ||  || |  ||  ||||||  |||||||||||||     
T  11897053 atactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaattttta-accggatacatcaacttttgttgaccc 11897151  T
Q  189 aaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||||||||| || ||||| |||||||    
T  11897152 aaatttctcttataaataggaccggagggagtattt 11897187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 571625 - 571542
Alignment:
Q  103 tcttatttataagagaat-tttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||| |||||| ||||| |||||||||||| || || |||||| ||||||||||| ||||||| | |||||||||||||    
T  571625 tcttatttataggagaatatttga-tcaacaaaagttaatgtacctagttcaaaattcagtctaaataca-taacttttgttgacc 571542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 12213608 - 12213560
Alignment:
Q  87 gatatactccctccggtcttatttataagagaattttgagtcaacaaaa 135  Q
    |||||||||||||| ||||||||||||||||||| ||  ||||||||||    
T  12213608 gatatactccctccagtcttatttataagagaatgttaggtcaacaaaa 12213560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 1598397 - 1598461
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 172  Q
    |||||||||||||| | || |||||||||| ||||| ||| | ||||||||||||||||||||||||    
T  1598397 tatttataagagaaatatg-gtcaacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 12483684 - 12483626
Alignment:
Q  165 aaatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatt 12483626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 17167826 - 17167768
Alignment:
Q  98 tccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaa 156  Q
    |||| ||||||||| || |||| |||||||||||||||||| || |||||| |||||||    
T  17167826 tccgatcttatttacaaaagaaatttgagtcaacaaaagttaatgtatctaattaaaaa 17167768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 9981644 - 9981693
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagt 137  Q
    ||||||| ||||||||| |||||||||||||| |||  ||||||||||||    
T  9981644 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagt 9981693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 11774605 - 11774536
Alignment:
Q  129 aacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 198  Q
    ||||||||||||  ||||||||| ||||||||||  || |||||  | |||||||||||||| |||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 31748423 - 31748358
Alignment:
Q  129 aacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattt 194  Q
    ||||||||||||||||||| ||| |||||| || | ||||| || || ||||||||| ||||||||    
T  31748423 aacaaaagttgatatatcttgtttaaaatttagactaaatatatacatttttgttgatctaaattt 31748358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 34042780 - 34042829
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattt 224  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagtattt 34042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 45871217 - 45871258
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatct 147  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  45871217 tatttataagagatgtttgagtcaacagaagttgatatatct 45871258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 14984921 - 14984969
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 14984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 19391948 - 19392004
Alignment:
Q  165 aaatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||| ||||||||| ||  || ||||||||||| |||| |||||||||||||    
T  19391948 aaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 21537900 - 21537984
Alignment:
Q  122 ttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 206  Q
    |||||||||| ||||||||| |||||  || ||| || ||| || ||||||  ||||||||||||  || |||||||||||||||    
T  21537900 ttgagtcaacgaaagttgatgtatctgattcaaattttagttcagatacatcaacttttgttgactcaattttctcttataaata 21537984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 30800556 - 30800460
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgac 186  Q
    ||||||||| || ||||||||| | |||||  ||| || ||||||||||||| |||||  || ||||||||||  | ||||||  ||||||||||||    
T  30800556 atactcccttcgatcttatttacatgagaacgttgggttaacaaaagttgatgtatctgattcaaaattcagtatagatacatcaacttttgttgac 30800460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 44955252 - 44955220
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatag 207  Q
    ||||||||||||||||| |||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaatag 44955220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 91 - 226
Target Start/End: Complemental strand, 49635 - 49500
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 49536  T
Q  191 atttctcttataaatagcactggaggtagtatttta 226  Q
    ||||||||||||||||| || |||||||||||||||    
T  49535 atttctcttataaataggaccggaggtagtatttta 49500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  165 aaatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||| || ||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 9395481 - 9395350
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9395481 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 9395382  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  9395381 aatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 90 - 224
Target Start/End: Original strand, 36563537 - 36563671
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36563537 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 36563636  T
Q  190 aatttctcttataaatagcactggaggtagtattt 224  Q
    |||||||||||||||||| |  |||||||||||||    
T  36563637 aatttctcttataaataggatcggaggtagtattt 36563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 37148955 - 37149087
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37149054  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  37149055 atttctcttataaataggaccggaggtagtatt 37149087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 41989406 - 41989538
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41989406 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41989505  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||| |||||| || |||||||||||    
T  41989506 aatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 17025756 - 17025619
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| |||||    
T  17025756 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacct 17025657  T
Q  189 aaatttctcttataaatagcactggaggtagtatttta 226  Q
    ||||||||||||||||||| || |||||||||||||||    
T  17025656 aaatttctcttataaataggaccggaggtagtatttta 17025619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 89 - 221
Target Start/End: Complemental strand, 11795300 - 11795168
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacct 188  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11795300 tatactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 11795201  T
Q  189 aaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||||||||| |  ||||||||||    
T  11795200 aaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 13103155 - 13103023
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  13103155 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13103056  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || ||||| |||||    
T  13103055 aatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 23360072 - 23359941
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23359973  T
Q  191 atttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||||||| ||  ||||||||||    
T  23359972 atttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 13033182 - 13033050
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||||||||||| || ||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  13033182 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13033083  T
Q  190 aatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||||| || ||||| |||||    
T  13033082 aatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 26350349 - 26350466
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||| |||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26350349 atactccctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26350448  T
Q  190 aatttctcttataaatag 207  Q
    ||||||||||||||||||    
T  26350449 aatttctcttataaatag 26350466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 20848203 - 20848072
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  20848203 tactccctccggtcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 20848105  T
Q  191 atttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||||||| || ||||||||||||    
T  20848104 atttctcttataaataggaccggaggtagtatt 20848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 89 - 223
Target Start/End: Complemental strand, 37642086 - 37641951
Alignment:
Q  89 tatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcac-ttttgttgacc 187  Q
    |||||||||||||||| ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||    
T  37642086 tatactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacc 37641987  T
Q  188 taaatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||||| || ||||||||||||    
T  37641986 taaatttctcttataaataggaccggaggtagtatt 37641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 94 - 226
Target Start/End: Complemental strand, 4444087 - 4443955
Alignment:
Q  94 tccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 193  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  4444087 tccctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatt 4443988  T
Q  194 tctcttataaatagcactggaggtagtatttta 226  Q
    |||||||||||||| || | ||| |||||||||    
T  4443987 tctcttataaataggaccgaaggaagtatttta 4443955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 21576079 - 21575970
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  21576079 atatactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacc 21575980  T
Q  188 taaatttctc 197  Q
    ||||||||||    
T  21575979 taaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 583099 - 582987
Alignment:
Q  111 ataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagcac 210  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggac 583000  T
Q  211 tggaggtagtatt 223  Q
     ||||||||||||    
T  582999 cggaggtagtatt 582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 6126954 - 6126845
Alignment:
Q  91 tactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 190  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaa 6126855  T
Q  191 atttctctta 200  Q
    ||||||||||    
T  6126854 atttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 38361743 - 38361807
Alignment:
Q  143 tatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaatag 38361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 13539909 - 13539979
Alignment:
Q  133 aaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||||| ||||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaatag 13539979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 35904528 - 35904448
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacat 172  Q
    |||||| || ||||||||||||| ||||||  || |||||||||||||  || ||| ||||||||||||||||||||||||||    
T  35904528 atactctcttcggtcttatttattagagaaaatttagtcaacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 97 - 207
Target Start/End: Original strand, 3549553 - 3549663
Alignment:
Q  97 ctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 196  Q
    |||||||| |||||||||||||| |||   | ||||||||||||| |||   |||||||||| || ||| ||||||| | ||||||||||  |||| |||    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatct 3549652  T
Q  197 cttataaatag 207  Q
    |||||||||||    
T  3549653 cttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 36595782 - 36595886
Alignment:
Q  99 ccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 198  Q
    |||||||||||||||||||||  ||  |||||||||| ||||| |||||  |||||||||||||| | |||||||   ||||||||| | ||  ||||||    
T  36595782 ccggtcttatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagtctagatacatt---ttttgttgatcaaatattctct 36595878  T
Q  199 tataaata 206  Q
    ||||||||    
T  36595879 tataaata 36595886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 39290889 - 39290792
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 203  Q
    ||||||||||||||  | || |||||||||||| || |||||| ||||||||| | |||||||||||  | |||||||||||| |  |||||||||||    
T  39290889 tatttataagagaaagtcgaatcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttataa 39290792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 2629561 - 2629657
Alignment:
Q  108 tttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 204  Q
    ||||||||| |  |||||||||| |||| ||||| ||| |||||||||| | ||  || ||||||| |||||||||||||||||| | |||||||||    
T  2629561 tttataagaaacatttgagtcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaa 2629657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 2366353 - 2366444
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 197  Q
    |||||||||||||| |||| |||||||| |||| || ||| | ||||||| ||||||||||||||||  |||||| || ||| || ||||||    
T  2366353 tatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttctc 2366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 966279 - 966162
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    |||| |||||| ||| |||||||||||||| ||||  ||||||||| |  || ||||| ||||||||||||||| | ||||||  ||| |||||||   |    
T  966279 ataccccctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtcaagatacatgaactgttgttgattca 966180  T
Q  190 aatttctcttataaatag 207  Q
    | |||||||| |||||||    
T  966179 actttctcttgtaaatag 966162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  167 atacattcacttttgttgacctaaatttctcttataaatagcactggagg 216  Q
    ||||||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 11795252 - 11795299
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtat 222  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 41989453 - 41989398
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtattttattgc 230  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| |||||||| ||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagtattttgttgc 41989398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagta 221  Q
    ||||||||||||| ||| ||||||||||||||| || ||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  163 ccaaatacattcacttttgttgacctaaatttctcttataaatag 207  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 9006897 - 9006949
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaatt 158  Q
    ||||||||| ||| ||||  |||||||||||||||| ||||||||| ||||||    
T  9006897 tatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 9395434 - 9395482
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9395482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 13103108 - 13103156
Alignment:
Q  175 acttttgttgacctaaatttctcttataaatagcactggaggtagtatt 223  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 13103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 12991 - 12858
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12991 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12892  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  12891 aatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 90 - 223
Target Start/End: Complemental strand, 23916 - 23783
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23916 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 23817  T
Q  190 aatttctcttataaatagcactggaggtagtatt 223  Q
    |||||||||||||||||| || ||||||||||||    
T  23816 aatttctcttataaataggaccggaggtagtatt 23783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 90 - 221
Target Start/End: Original strand, 6130 - 6261
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  6130 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgaccta 6229  T
Q  190 aatttctcttataaatagcactggaggtagta 221  Q
    |||||||||||||||||| || ||||||||||    
T  6230 aatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 1450 - 1328
Alignment:
Q  106 tatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 205  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1450 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 1351  T
Q  206 agcactggaggtagtattttatt 228  Q
    || || ||| ||||||| |||||    
T  1350 aggaccggatgtagtatgttatt 1328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 231302 - 231415
Alignment:
Q  90 atactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgaccta 189  Q
    ||||||||||||||| |||||||| |||||| ||  ||||||||||||||||||| |||||| ||||||||||||| ||||||  ||||||||||| | |    
T  231302 atactccctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatcca 231401  T
Q  190 aatttctcttataa 203  Q
    | ||||||||||||    
T  231402 actttctcttataa 231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 1 - 120
Alignment:
Q  107 atttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 206  Q
    |||||||||||||  | |||||||||||||||||| ||| | |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||    
T  1 atttataagagaaagtcgagtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaata 99  T
Q  207 gcactggaggtagtattttat 227  Q
    | || ||||| ||||| ||||    
T  100 gaaccggagggagtatattat 120  T

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Target: scaffold0415 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 13782 - 13857
Alignment:
Q  147 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagcactggaggtagtat 222  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||| |||| ||| |||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggactgaagggagtat 13857  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 312843 - 312747
Alignment:
Q  96 cctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaat 192  Q
    |||||||| ||||||| |||||| ||||   ||||||||| ||||| ||||||||| ||||||  |  || ||||||| ||||||||||||| ||||    
T  312843 cctccggttttatttaaaagagactttttgatcaacaaaaattgatgtatctagtttaaaatttggatcagatacattaacttttgttgaccaaaat 312747  T

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Target: scaffold0063 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 53338 - 53471
Alignment:
Q  88 atatactccctccggtcttatttataagagaattttgagtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacc 187  Q
    ||||||||| |||| |||||||||||| ||||  ||  |  ||||||||||||| ||||| |||||||||| | | || |||||  || |||||||||||    
T  53338 atatactccatccgatcttatttataaaagaaagtttggataacaaaagttgatgtatctcgttaaaaattaaattcagataca-acaattttgttgacc 53436  T
Q  188 taaatttctcttataaatagcactggaggtagtatt 223  Q
    ||  ||| | |||||||||| |||||||| ||||||    
T  53437 taccttt-ttttataaataggactggagggagtatt 53471  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 30042 - 30122
Alignment:
Q  126 gtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 206  Q
    ||||| ||||| |||| ||||||||||| |||| || ||||||||||  ||||||||| |  ||||| ||| |||||||||    
T  30042 gtcaataaaagatgatgtatctagttaagaatttagaccaaatacatctacttttgtttatttaaatgtctattataaata 30122  T

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