View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8364_low_9 (Length: 371)
Name: NF8364_low_9
Description: NF8364
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8364_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 6 - 354
Target Start/End: Original strand, 46589776 - 46590124
Alignment:
| Q |
6 |
tattattctgtacacatttgacttatcagctattaattgaacttttcatcatcttattaaaccaaatcataatcttaaggttaaatctattttgcatatg |
105 |
Q |
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| T |
46589776 |
tattattctgtacacatttgacttatcagctattaattgaacttttcatcatcttattaaaccaaatcataatcttaaggttaaatctattttgcatatg |
46589875 |
T |
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| Q |
106 |
tgacatatgttttgcacgatatacacaaagttgtttcttccattccactgtatcaacaaatttcaatatcaaatttaatgatctattgtaagatttaatt |
205 |
Q |
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| T |
46589876 |
tgacatatgttttgcacgatatacacaaagttgtttcttccattccattgtatcaacaaatttcaatatcaaatttaatgatctattgtaagatttaatt |
46589975 |
T |
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| Q |
206 |
atttattgagnnnnnnnngtttgtatatagttcaatactgacttgtttgtgaaagaatattacacaaagtcagtcttatgagaggtgattttttaacgcc |
305 |
Q |
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| T |
46589976 |
atttattgagaaaaaaaagtttgtatatagttcaatactgatttgtttgtgaaagaatattacacaaagtcagtcttatgagaggtgattttttaacgcc |
46590075 |
T |
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| Q |
306 |
cttgccaaaaaacaacctttctcattctctttatctcacttcatcattt |
354 |
Q |
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| T |
46590076 |
cttgccaaaaatcaacctttctcattctctttatctcacttcatcattt |
46590124 |
T |
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