View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8368_high_10 (Length: 463)
Name: NF8368_high_10
Description: NF8368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8368_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 21 - 448
Target Start/End: Complemental strand, 33455247 - 33454820
Alignment:
| Q |
21 |
taagcatcattggttggttgatagtactgtgagtataggcatgcagtataaattacaaaaggttctattcggagtaatgtcatatttactctaaagaagc |
120 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33455247 |
taagcatcattggttggttgatagtactgtgagtataggcatgcagtataaattacaaaaggttctattcggagtaatgtcatatttactctaaagaagc |
33455148 |
T |
|
| Q |
121 |
aggttcagttttgacttaacacgagaggtcttacaaaggaaatttgtaagactgaagaaaatgtcgttgatactttttgatcgagttctgctttcattta |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
33455147 |
aggttcagttttgacttaacacgagaggtcttacaaagaaaatttgtaagactgaagaaaatgtcgttgatactttttgatcgagtcctgctttcattta |
33455048 |
T |
|
| Q |
221 |
tgatattgtcagtacatcattaggcctctaagattttcatttaagcaagagagttaaaatgcataaataggtttttaaggaaggtattatacaatgcaca |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33455047 |
tgatattgtcagtacatcattaggcctctaagattttcatttaagcaagagagttaaaatgcataaataggtttttaaggaaggtattatacaatgcaca |
33454948 |
T |
|
| Q |
321 |
ctgattgctttggttgtctacatattccttgatcaagttaaaattgtgaagatgcaatgtggaaacgttttatcttgttcttatttccatcaattaaaac |
420 |
Q |
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| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33454947 |
catattgctttggttgtctacatattccttgatcaagtaaaaattgtgaagatgcaatgtggaaacgttttatcttgttcttatttccatcaattaaaac |
33454848 |
T |
|
| Q |
421 |
tttaattgcggtataaggtggttctctg |
448 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
33454847 |
tttaattgcggtataaggtggttctctg |
33454820 |
T |
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