View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8368_low_25 (Length: 232)
Name: NF8368_low_25
Description: NF8368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8368_low_25 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 34020042 - 34020255
Alignment:
| Q |
7 |
tcaggaacattgttgtaggttgattagtgaagagttatgtagtattttctttatttttaagtaggtactgctttggtttaatagctagtgtttgattttt |
106 |
Q |
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|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34020042 |
tcaggaacattgttgtaggttgattaattaagagttatgtagtattttctttatttttaagtaggtactgctttggtttaatagctagtgtttgattttt |
34020141 |
T |
|
| Q |
107 |
tagcgtaatgtaataaattatgactgcattctatgctattagtagtggtttaatagacatgtttacttttaaattatggaaaattagtgtagtagaattg |
206 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
34020142 |
tagcgtaatgtaataaattatgactgcattttatgctattagtagtgg-ttaatagacatgtttacttttaaattatggaaaattagtgtaatagaattg |
34020240 |
T |
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| Q |
207 |
tttggattagttcat |
221 |
Q |
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||||||||||||||| |
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| T |
34020241 |
tttggattagttcat |
34020255 |
T |
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