View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8369_low_7 (Length: 471)

Name: NF8369_low_7
Description: NF8369
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8369_low_7
NF8369_low_7
[»] chr1 (5 HSPs)
chr1 (19-112)||(23944112-23944205)
chr1 (276-369)||(5603128-5603221)
chr1 (278-378)||(42883723-42883823)
chr1 (332-387)||(37259311-37259366)
chr1 (326-388)||(28446547-28446609)
[»] chr5 (8 HSPs)
chr5 (266-376)||(40266545-40266655)
chr5 (308-389)||(25787840-25787921)
chr5 (258-320)||(17644530-17644592)
chr5 (326-375)||(6706052-6706101)
chr5 (326-387)||(11135741-11135802)
chr5 (266-320)||(1145814-1145868)
chr5 (326-376)||(7335544-7335594)
chr5 (304-369)||(17636362-17636427)
[»] chr3 (4 HSPs)
chr3 (280-387)||(26998258-26998365)
chr3 (339-388)||(3539667-3539716)
chr3 (313-391)||(30533216-30533294)
chr3 (326-390)||(54525799-54525863)
[»] chr4 (4 HSPs)
chr4 (281-387)||(54208180-54208286)
chr4 (340-378)||(38676948-38676986)
chr4 (326-375)||(24974163-24974212)
chr4 (326-387)||(27992321-27992382)
[»] chr7 (3 HSPs)
chr7 (306-387)||(28138759-28138840)
chr7 (266-324)||(149036-149094)
chr7 (326-375)||(38386186-38386235)
[»] chr2 (2 HSPs)
chr2 (270-387)||(12965049-12965166)
chr2 (308-387)||(19984702-19984781)
[»] chr8 (6 HSPs)
chr8 (278-390)||(27235489-27235601)
chr8 (270-322)||(150940-150992)
chr8 (306-390)||(9448342-9448426)
chr8 (270-396)||(15908883-15909009)
chr8 (266-335)||(17875321-17875390)
chr8 (326-370)||(33228900-33228944)
[»] chr6 (1 HSPs)
chr6 (326-390)||(32275788-32275852)
[»] scaffold0085 (2 HSPs)
scaffold0085 (311-390)||(46580-46659)
scaffold0085 (325-378)||(47239-47292)


Alignment Details
Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 23944205 - 23944112
Alignment:
Q  19 gtcgggagggtcaggcggtttcgaagacattgccgctggccgtggagatgtgaaagtgaaatccatgaacaagaagaaaccctagcggagctct 112  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  23944205 gtcgggagggtcaggcggtttcgaagacatggccgctggccgtggagacgtgaaagtgaaatccatgaacaagaagaaaccctaccggagctct 23944112  T

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Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 276 - 369
Target Start/End: Original strand, 5603128 - 5603221
Alignment:
Q  276 aacgtgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccattt 369  Q
    |||||||||||||||| | |||||||| | |||||| |||||||||||||||||  | ||   ||||||| |||| ||||||||||| ||||||    
T  5603128 aacgtgagttaactcacgcaaatttaacactagcgtgagttaactcatgcagggacactttgatcatttactttgaaaatgagcaaatccattt 5603221  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 378
Target Start/End: Original strand, 42883723 - 42883823
Alignment:
Q  278 cgtgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaag 377  Q
    |||||||||||||||| |||||||| | | |||| |||||||   || |||| |||||  | |||||||||| ||||||||||||||||||| | |||||    
T  42883723 cgtgagttaactcatgcaaatttaacacttgcgtgagttaacatgtgtagggatattttggacatttattttagaaatgagcaaaaccatttagctaaag 42883822  T
Q  378 a 378  Q
    |    
T  42883823 a 42883823  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 387
Target Start/End: Complemental strand, 37259366 - 37259311
Alignment:
Q  332 atttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattc 387  Q
    ||||||| |||||| ||||||||||||||||||| ||| |||||||| || |||||    
T  37259366 atttcagacatttactttggaaatgagcaaaaccgtttagataaagagcataattc 37259311  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 388
Target Start/End: Original strand, 28446547 - 28446609
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattca 388  Q
    ||||| |||||||||||||| ||||| ||||||| || |||||||| ||| || |||||||||    
T  28446547 aggggcatttcagtcatttactttgggaatgagcgaatccatttgggtaatgagcaaaattca 28446609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 376
Target Start/End: Original strand, 40266545 - 40266655
Alignment:
Q  266 taagtcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaacc 365  Q
    ||||||||| | |||||||||||||| | |||||||| |||||||| |||||||||| ||| ||| ||||  |||||||| ||||| |||||||||| ||    
T  40266545 taagtcacgtagcgtgagttaactcacgcaaatttaacattagcgtgagttaactcacgcatgggcattttggtcatttactttgggaatgagcaaatcc 40266644  T
Q  366 atttggataaa 376  Q
    |||||| ||||    
T  40266645 atttgggtaaa 40266655  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 389
Target Start/End: Original strand, 25787840 - 25787921
Alignment:
Q  308 gcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattcaa 389  Q
    |||| |||||||||||||||||| ||||  ||||||||||||||||||||||| |||| |||||||||||| || |||||||    
T  25787840 gcgtgagttaactcatgcaggggcattttggtcatttattttggaaatgagcataaccgtttggataaagagcagaattcaa 25787921  T

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Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 17644530 - 17644592
Alignment:
Q  258 gcgtgatctaagtcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaact 320  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| | |||||| ||||||||    
T  17644530 gcgtgatttaagtcacgcagcgtgagttaactcatgtaaatttaacactagcgtgagttaact 17644592  T

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Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 6706052 - 6706101
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataa 375  Q
    ||||| |||||||||||||| ||||||||||||| || ||||||||||||    
T  6706052 aggggcatttcagtcatttactttggaaatgagcgaatccatttggataa 6706101  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 387
Target Start/End: Complemental strand, 11135802 - 11135741
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattc 387  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||| |||||| || |||||    
T  11135802 aggggtattttggtcatttattttggaaatgagcgaaatcatttgggtaaagagcataattc 11135741  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 1145814 - 1145868
Alignment:
Q  266 taagtcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaact 320  Q
    |||| |||||| |||||||||||||||| |||||| | |||||||| ||||||||    
T  1145814 taagacacgcagcgtgagttaactcatgcaaattttacattagcgtgagttaact 1145868  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 7335594 - 7335544
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaa 376  Q
    ||||||||||  |||||||||||| | ||||||||||||| ||||||||||    
T  7335594 aggggtattttggtcatttattttaggaatgagcaaaaccgtttggataaa 7335544  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 17636427 - 17636362
Alignment:
Q  304 attagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccattt 369  Q
    |||||||| |||||||   || |||||||||||| ||||||||||||| ||||||| || ||||||    
T  17636427 attagcgtgagttaacatgtgtaggggtatttcaatcatttattttgggaatgagcgaatccattt 17636362  T

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Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 26998258 - 26998365
Alignment:
Q  280 tgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaa 379  Q
    ||||||||||||||||||||||| | |||||| |||||||   || |||| |||||   ||||||||||| ||||||||| ||||||||||||| ||||     
T  26998258 tgagttaactcatgtaaatttaacactagcgtgagttaacatgtgtagggatattttgatcatttattttagaaatgagcgaaaccatttggatgaagag 26998357  T
Q  380 caaaattc 387  Q
    || |||||    
T  26998358 cagaattc 26998365  T

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Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 3539716 - 3539667
Alignment:
Q  339 tcatttattttggaaatgagcaaaaccatttggataaagaacaaaattca 388  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||    
T  3539716 tcatttattttggaaatgagcaaaaccatttggataaagagcataattca 3539667  T

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Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 391
Target Start/End: Complemental strand, 30533294 - 30533216
Alignment:
Q  313 agttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattcaaat 391  Q
    |||||||||| ||||||||||||  | |||||| ||||| ||||||| ||||||||||| | ||||  |||||||||||    
T  30533294 agttaactcacgcaggggtatttgtgacatttactttgggaatgagcgaaaccatttgggtgaagagtaaaattcaaat 30533216  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 54525863 - 54525799
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattcaaa 390  Q
    |||| ||||||||||||||| ||||||||||||| || | |||| | |||||| || ||||||||    
T  54525863 agggatatttcagtcatttactttggaaatgagcgaatcaatttaggtaaagagcataattcaaa 54525799  T

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Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 54208286 - 54208180
Alignment:
Q  281 gagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaac 380  Q
    ||||||| ||| ||||||| || | || ||||||||||||   | ||||||||||   ||||||| ||||| |||||||||||||||||||||||||| |    
T  54208286 gagttaagtcacgtaaattcaacactaacgtaagttaacttgagtaggggtattttgatcatttactttgggaatgagcaaaaccatttggataaagagc 54208187  T
Q  381 aaaattc 387  Q
    | |||||    
T  54208186 ataattc 54208180  T

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Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 378
Target Start/End: Complemental strand, 38676986 - 38676948
Alignment:
Q  340 catttattttggaaatgagcaaaaccatttggataaaga 378  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  38676986 catttattttgggaatgagcaaaaccgtttggataaaga 38676948  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 24974163 - 24974212
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataa 375  Q
    ||||| ||||| |||||||| ||||| |||||||||| ||||||||||||    
T  24974163 aggggcatttcggtcatttactttgggaatgagcaaatccatttggataa 24974212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 27992321 - 27992382
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattc 387  Q
    ||||||||||  | |||||||||| |||||||||||| |||||||| ||| ||||| |||||    
T  27992321 aggggtattttggacatttattttagaaatgagcaaatccatttgggtaatgaacataattc 27992382  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 28138840 - 28138759
Alignment:
Q  306 tagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattc 387  Q
    |||||| |||||| ||| ||||||||||||  |||||||| ||||| ||||||||||| ||||||| |||||| || |||||    
T  28138840 tagcgtgagttaagtcacgcaggggtattttggtcatttactttgggaatgagcaaaatcatttgggtaaagagcagaattc 28138759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 324
Target Start/End: Complemental strand, 149094 - 149036
Alignment:
Q  266 taagtcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaactcatg 324  Q
    ||||||| ||||||||| |||||||| | |||||||| | |||||| ||||||||||||    
T  149094 taagtcatgcaacgtgacttaactcacgcaaatttaacactagcgtgagttaactcatg 149036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 38386235 - 38386186
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataa 375  Q
    ||||| |||||| ||||||| ||||||||||||| || ||||||||||||    
T  38386235 aggggcatttcaatcatttactttggaaatgagcgaatccatttggataa 38386186  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 270 - 387
Target Start/End: Complemental strand, 12965166 - 12965049
Alignment:
Q  270 tcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccattt 369  Q
    ||||||| |||||||||||||  |||||||||| |||||||| |||||||||| | ||| | ||||   ||||||| |||| ||||||||| || | |||    
T  12965166 tcacgcagcgtgagttaactctcgtaaatttaacattagcgtgagttaactcacgtaggagcattttgatcatttactttgaaaatgagcagaaacgttt 12965067  T
Q  370 ggataaagaacaaaattc 387  Q
    || |||||| || |||||    
T  12965066 gggtaaagagcagaattc 12965049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 387
Target Start/End: Original strand, 19984702 - 19984781
Alignment:
Q  308 gcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattc 387  Q
    |||| |||||||||| ||||||||||||  |||||||| ||| |||| ||||| |||| ||||| |||||| || |||||    
T  19984702 gcgtgagttaactcacgcaggggtattttggtcatttactttagaaacgagcataaccgtttgggtaaagagcagaattc 19984781  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 390
Target Start/End: Original strand, 27235489 - 27235601
Alignment:
Q  278 cgtgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaag 377  Q
    ||||| |||||||| | |||||||| ||||||||||||||||   || |||| ||||| ||||| ||  ||||  ||||||||||| ||||| |||||||    
T  27235489 cgtgatttaactcacgcaaatttaacattagcgtaagttaacatgtgtagggatattttagtcaatttctttgagaatgagcaaaaacatttagataaag 27235588  T
Q  378 aacaaaattcaaa 390  Q
    | || ||||||||    
T  27235589 agcataattcaaa 27235601  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 150940 - 150992
Alignment:
Q  270 tcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaactca 322  Q
    |||||||||||||||||| ||| | | | ||||||||||||||||||||||||    
T  150940 tcacgcaacgtgagttaagtcacgcagaattaatattagcgtaagttaactca 150992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 9448426 - 9448342
Alignment:
Q  306 tagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattcaaa 390  Q
    |||||| | |||||||| | || |||||||  ||||||||| |||| ||||| ||||||| ||||| |||||| |||||||||||    
T  9448426 tagcgtgacttaactcacgtagcggtattttggtcatttatcttgggaatgatcaaaaccttttgggtaaagagcaaaattcaaa 9448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 396
Target Start/End: Complemental strand, 15909009 - 15908883
Alignment:
Q  270 tcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccattt 369  Q
    |||| ||||||| |||||||||  |||| |||||| |||| | |||||||||||||| ||||| ||  ||| |||   |||| || |||||||| || ||    
T  15909009 tcacacaacgtgtgttaactcacttaaaattaatactagcatgagttaactcatgcatgggtaattttgtcttttcagttgggaacgagcaaaaacagtt 15908910  T
Q  370 ggataaagaacaaaattcaaatattga 396  Q
     |||||||| |||||||| || |||||    
T  15908909 agataaagagcaaaattctaaaattga 15908883  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 17875321 - 17875390
Alignment:
Q  266 taagtcacgcaacgtgagttaactcatgtaaatttaatattagcgtaagttaactcatgcaggggtattt 335  Q
    |||||||||||||||||||||| ||| | ||||| || | ||| || |||||||||| |||||| |||||    
T  17875321 taagtcacgcaacgtgagttaagtcacgcaaattaaacactagtgtgagttaactcacgcagggttattt 17875390  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 33228900 - 33228944
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttg 370  Q
    |||||||| || |||||||| |||||||||||||||| |||||||    
T  33228900 aggggtatatccgtcatttactttggaaatgagcaaatccatttg 33228944  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 32275788 - 32275852
Alignment:
Q  326 aggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattcaaa 390  Q
    ||||| |||||||||||||| ||||| |||||||  |||||||||||||| || || ||||||||    
T  32275788 aggggcatttcagtcatttactttgggaatgagcggaaccatttggataatgagcataattcaaa 32275852  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 390
Target Start/End: Complemental strand, 46659 - 46580
Alignment:
Q  311 taagttaactcatgcaggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaagaacaaaattcaaa 390  Q
    |||||||||||| ||||||||||||  || ||||| |||   ||||||||||||| ||||||| || |||| ||||||||    
T  46659 taagttaactcacgcaggggtattttggttatttactttaataatgagcaaaaccgtttggatgaaaaacataattcaaa 46580  T

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Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 378
Target Start/End: Original strand, 47239 - 47292
Alignment:
Q  325 caggggtatttcagtcatttattttggaaatgagcaaaaccatttggataaaga 378  Q
    |||||||||||  | |||||||||||| |||||||| |||| ||||||||||||    
T  47239 caggggtattttggccatttattttgggaatgagcataaccgtttggataaaga 47292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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