View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8370_low_12 (Length: 359)

Name: NF8370_low_12
Description: NF8370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8370_low_12
NF8370_low_12
[»] chr7 (42 HSPs)
chr7 (1-106)||(43371168-43371273)
chr7 (161-228)||(43371105-43371171)
chr7 (281-359)||(5378732-5378810)
chr7 (279-359)||(2790282-2790363)
chr7 (286-359)||(5978684-5978757)
chr7 (286-359)||(44894367-44894440)
chr7 (280-359)||(37856068-37856147)
chr7 (281-359)||(12141989-12142067)
chr7 (278-359)||(10591258-10591338)
chr7 (286-359)||(46651777-46651850)
chr7 (286-359)||(48866823-48866896)
chr7 (280-359)||(5198646-5198726)
chr7 (281-359)||(21858852-21858930)
chr7 (281-359)||(25887688-25887766)
chr7 (286-359)||(34348920-34348993)
chr7 (286-340)||(7990197-7990251)
chr7 (286-359)||(155874-155947)
chr7 (294-359)||(12102610-12102675)
chr7 (286-359)||(30180612-30180685)
chr7 (286-359)||(37351883-37351956)
chr7 (286-359)||(47193032-47193105)
chr7 (281-359)||(21752763-21752841)
chr7 (281-358)||(40717126-40717204)
chr7 (288-359)||(8792495-8792563)
chr7 (286-359)||(33684785-33684858)
chr7 (286-359)||(45607129-45607202)
chr7 (286-359)||(7807161-7807233)
chr7 (277-351)||(19426693-19426767)
chr7 (277-359)||(45432049-45432131)
chr7 (286-359)||(2414168-2414239)
chr7 (286-349)||(7701437-7701492)
chr7 (325-359)||(10656737-10656771)
chr7 (325-359)||(42204658-42204692)
chr7 (286-349)||(46022377-46022432)
chr7 (286-359)||(19510250-19510323)
chr7 (320-357)||(24700228-24700265)
chr7 (318-359)||(41985029-41985070)
chr7 (286-355)||(43445516-43445585)
chr7 (287-359)||(7077647-7077719)
chr7 (280-359)||(26041415-26041495)
chr7 (331-359)||(31982162-31982190)
chr7 (319-359)||(39875735-39875775)
[»] chr8 (40 HSPs)
chr8 (286-359)||(41344562-41344635)
chr8 (297-359)||(26871149-26871211)
chr8 (286-359)||(23258137-23258210)
chr8 (286-359)||(40413256-40413329)
chr8 (276-359)||(21648813-21648897)
chr8 (287-359)||(28927786-28927858)
chr8 (281-358)||(40102129-40102206)
chr8 (291-359)||(22767235-22767303)
chr8 (286-359)||(14029135-14029209)
chr8 (286-359)||(5359443-5359516)
chr8 (286-359)||(24503022-24503095)
chr8 (286-359)||(37524321-37524394)
chr8 (286-359)||(38128419-38128492)
chr8 (276-359)||(37101568-37101652)
chr8 (288-359)||(7678837-7678908)
chr8 (286-352)||(44103877-44103944)
chr8 (286-359)||(3989010-3989083)
chr8 (286-359)||(896012-896081)
chr8 (280-359)||(43602309-43602389)
chr8 (280-358)||(3650219-3650298)
chr8 (290-357)||(27836287-27836354)
chr8 (286-359)||(9963791-9963864)
chr8 (286-359)||(154395-154468)
chr8 (286-359)||(295651-295724)
chr8 (286-359)||(11223752-11223825)
chr8 (286-359)||(21273603-21273676)
chr8 (286-359)||(44672126-44672199)
chr8 (319-359)||(426206-426246)
chr8 (286-359)||(5502465-5502540)
chr8 (282-359)||(24946107-24946181)
chr8 (319-358)||(26507829-26507868)
chr8 (320-359)||(42012515-42012554)
chr8 (289-359)||(28473441-28473511)
chr8 (286-359)||(30925547-30925620)
chr8 (286-351)||(42543373-42543439)
chr8 (277-314)||(1370179-1370216)
chr8 (288-359)||(34474054-34474127)
chr8 (280-357)||(40713599-40713675)
chr8 (325-358)||(42996568-42996601)
chr8 (286-359)||(40604596-40604671)
[»] chr3 (46 HSPs)
chr3 (287-359)||(19418054-19418126)
chr3 (286-359)||(41111965-41112038)
chr3 (286-359)||(49130959-49131032)
chr3 (290-359)||(11173555-11173624)
chr3 (286-359)||(47849775-47849848)
chr3 (288-355)||(46315850-46315917)
chr3 (288-359)||(46473233-46473304)
chr3 (281-359)||(28300534-28300612)
chr3 (281-359)||(29706008-29706086)
chr3 (286-359)||(7231899-7231972)
chr3 (286-359)||(20380782-20380855)
chr3 (291-359)||(37215129-37215197)
chr3 (279-359)||(41957618-41957698)
chr3 (277-359)||(28269911-28269993)
chr3 (286-359)||(31997907-31997981)
chr3 (281-359)||(48649686-48649764)
chr3 (288-359)||(32687854-32687926)
chr3 (281-357)||(42475865-42475941)
chr3 (277-359)||(33007465-33007548)
chr3 (281-359)||(35272132-35272211)
chr3 (281-359)||(37302962-37303040)
chr3 (286-359)||(9027978-9028051)
chr3 (291-358)||(39540341-39540408)
chr3 (286-359)||(6126559-6126633)
chr3 (281-359)||(8066460-8066537)
chr3 (286-359)||(7293992-7294065)
chr3 (286-351)||(30839570-30839635)
chr3 (286-359)||(37303488-37303561)
chr3 (287-351)||(44365185-44365250)
chr3 (282-359)||(48945952-48946029)
chr3 (286-359)||(51672968-51673041)
chr3 (311-359)||(5188341-5188389)
chr3 (287-359)||(51650459-51650534)
chr3 (280-359)||(52453978-52454058)
chr3 (286-358)||(52727341-52727413)
chr3 (281-359)||(31249209-31249288)
chr3 (286-359)||(41877502-41877577)
chr3 (286-359)||(3730961-3731035)
chr3 (286-357)||(5350409-5350482)
chr3 (286-316)||(20162588-20162618)
chr3 (281-359)||(34733182-34733259)
chr3 (325-359)||(39604178-39604212)
chr3 (286-359)||(44695116-44695190)
chr3 (288-345)||(47723230-47723287)
chr3 (286-314)||(23592387-23592415)
chr3 (280-359)||(41877793-41877873)
[»] chr1 (43 HSPs)
chr1 (280-359)||(40610334-40610413)
chr1 (286-359)||(46948084-46948157)
chr1 (274-359)||(36690453-36690538)
chr1 (274-359)||(36706554-36706639)
chr1 (291-359)||(28253120-28253188)
chr1 (286-359)||(39010919-39010992)
chr1 (286-359)||(50659085-50659158)
chr1 (279-359)||(50061862-50061942)
chr1 (281-359)||(7645442-7645518)
chr1 (288-358)||(22389421-22389490)
chr1 (292-358)||(36418185-36418251)
chr1 (286-359)||(30631738-30631811)
chr1 (286-359)||(50141828-50141901)
chr1 (286-357)||(2362476-2362547)
chr1 (286-357)||(34187371-34187442)
chr1 (277-359)||(35846203-35846285)
chr1 (288-334)||(43755581-43755627)
chr1 (286-359)||(51703005-51703077)
chr1 (287-359)||(31290102-31290174)
chr1 (304-352)||(37690527-37690575)
chr1 (318-358)||(38913694-38913734)
chr1 (287-358)||(51571534-51571603)
chr1 (304-359)||(5477074-5477129)
chr1 (280-358)||(7503571-7503650)
chr1 (277-359)||(45272041-45272126)
chr1 (288-357)||(29264110-29264179)
chr1 (291-359)||(366762-366830)
chr1 (319-359)||(10384633-10384673)
chr1 (288-340)||(20268412-20268464)
chr1 (280-359)||(28703011-28703091)
chr1 (287-358)||(31817289-31817360)
chr1 (281-352)||(37516024-37516094)
chr1 (286-359)||(49453585-49453655)
chr1 (286-359)||(25302537-25302611)
chr1 (286-349)||(46907099-46907154)
chr1 (286-351)||(48872844-48872909)
chr1 (286-359)||(50226772-50226846)
chr1 (286-359)||(1615142-1615215)
chr1 (286-323)||(28716284-28716321)
chr1 (286-359)||(45042366-45042438)
chr1 (286-359)||(45740437-45740510)
chr1 (311-359)||(16836032-16836080)
chr1 (286-314)||(24981679-24981707)
[»] chr2 (46 HSPs)
chr2 (289-359)||(22390257-22390327)
chr2 (281-359)||(23344877-23344955)
chr2 (286-359)||(2013178-2013251)
chr2 (280-359)||(14714091-14714170)
chr2 (286-359)||(25801704-25801777)
chr2 (277-359)||(34442218-34442300)
chr2 (286-355)||(44189936-44190003)
chr2 (286-359)||(3091846-3091919)
chr2 (286-359)||(7086017-7086090)
chr2 (286-359)||(29795541-29795614)
chr2 (287-359)||(11164270-11164342)
chr2 (280-359)||(6365291-6365370)
chr2 (281-359)||(11229209-11229287)
chr2 (286-359)||(13104584-13104657)
chr2 (286-359)||(32750103-32750176)
chr2 (282-359)||(43725310-43725387)
chr2 (288-359)||(36435786-36435857)
chr2 (286-352)||(12600160-12600226)
chr2 (281-359)||(14140227-14140305)
chr2 (286-352)||(36133086-36133152)
chr2 (286-359)||(6639365-6639438)
chr2 (286-359)||(13711166-13711239)
chr2 (286-359)||(36376744-36376817)
chr2 (286-359)||(39454140-39454213)
chr2 (286-359)||(42081142-42081215)
chr2 (286-357)||(31296736-31296807)
chr2 (286-357)||(42251813-42251884)
chr2 (281-359)||(5455341-5455419)
chr2 (281-359)||(19695580-19695657)
chr2 (286-356)||(23045269-23045339)
chr2 (286-359)||(34249685-34249759)
chr2 (278-359)||(37631251-37631333)
chr2 (278-359)||(1889252-1889333)
chr2 (277-359)||(5067526-5067607)
chr2 (288-359)||(45515494-45515565)
chr2 (281-359)||(15019031-15019110)
chr2 (291-358)||(23880201-23880268)
chr2 (325-359)||(15141567-15141601)
chr2 (286-359)||(19913889-19913963)
chr2 (286-349)||(25270692-25270747)
chr2 (286-359)||(26321590-26321663)
chr2 (288-329)||(2464272-2464313)
chr2 (283-359)||(3960001-3960078)
chr2 (286-359)||(12962491-12962564)
chr2 (288-357)||(43650442-43650511)
chr2 (288-359)||(19668082-19668153)
[»] chr5 (38 HSPs)
chr5 (282-355)||(4834918-4834991)
chr5 (286-358)||(20719908-20719980)
chr5 (289-358)||(34767313-34767382)
chr5 (279-359)||(39595379-39595459)
chr5 (277-359)||(125197-125279)
chr5 (281-359)||(31284282-31284360)
chr5 (281-352)||(24431506-24431577)
chr5 (286-359)||(28811533-28811606)
chr5 (286-359)||(33567132-33567205)
chr5 (281-359)||(12718268-12718346)
chr5 (286-359)||(40566109-40566183)
chr5 (286-359)||(2117533-2117606)
chr5 (286-359)||(11306801-11306874)
chr5 (286-359)||(27392595-27392668)
chr5 (287-359)||(34381117-34381189)
chr5 (281-359)||(9714023-9714102)
chr5 (281-359)||(12779494-12779572)
chr5 (277-357)||(10232606-10232687)
chr5 (286-359)||(19376025-19376098)
chr5 (291-359)||(11666284-11666352)
chr5 (288-359)||(34400722-34400791)
chr5 (274-355)||(30334645-30334728)
chr5 (288-359)||(33243636-33243707)
chr5 (286-352)||(11767883-11767949)
chr5 (287-357)||(29402289-29402359)
chr5 (325-359)||(42909824-42909858)
chr5 (286-359)||(19127229-19127302)
chr5 (290-359)||(29498232-29498301)
chr5 (280-358)||(3141602-3141680)
chr5 (287-357)||(12661840-12661911)
chr5 (286-359)||(5130270-5130344)
chr5 (281-358)||(7077226-7077304)
chr5 (286-359)||(13613856-13613930)
chr5 (293-359)||(32536921-32536986)
chr5 (286-359)||(14323861-14323934)
chr5 (286-359)||(17990319-17990392)
chr5 (286-314)||(17625916-17625944)
chr5 (288-359)||(23991336-23991408)
[»] chr6 (22 HSPs)
chr6 (288-359)||(16336965-16337036)
chr6 (286-359)||(34021065-34021138)
chr6 (286-359)||(1897791-1897864)
chr6 (286-358)||(30906556-30906628)
chr6 (287-359)||(2582767-2582839)
chr6 (286-358)||(24752337-24752409)
chr6 (287-359)||(32457146-32457218)
chr6 (277-359)||(17768031-17768113)
chr6 (281-359)||(32853032-32853110)
chr6 (277-348)||(1196151-1196222)
chr6 (286-359)||(9954653-9954727)
chr6 (286-356)||(26378278-26378348)
chr6 (286-359)||(29383662-29383735)
chr6 (291-359)||(10387715-10387783)
chr6 (288-359)||(28965734-28965806)
chr6 (286-329)||(2241719-2241762)
chr6 (286-357)||(30733116-30733187)
chr6 (286-359)||(11785462-11785536)
chr6 (286-359)||(32253885-32253959)
chr6 (286-359)||(2340503-2340576)
chr6 (282-358)||(2881439-2881516)
chr6 (286-357)||(22491922-22491993)
[»] chr4 (55 HSPs)
chr4 (287-359)||(24772776-24772848)
chr4 (281-358)||(16004215-16004291)
chr4 (286-359)||(55927089-55927162)
chr4 (277-352)||(28480422-28480497)
chr4 (286-359)||(25523089-25523162)
chr4 (282-359)||(36512947-36513024)
chr4 (281-352)||(28481300-28481371)
chr4 (281-352)||(28482175-28482246)
chr4 (286-359)||(4896393-4896466)
chr4 (286-359)||(31275251-31275324)
chr4 (282-359)||(51389421-51389498)
chr4 (291-359)||(38844388-38844456)
chr4 (286-359)||(42915112-42915185)
chr4 (281-359)||(5234359-5234437)
chr4 (289-359)||(31658024-31658094)
chr4 (286-359)||(39241195-39241269)
chr4 (285-358)||(23690337-23690410)
chr4 (286-359)||(29384090-29384163)
chr4 (286-358)||(36792438-36792511)
chr4 (286-359)||(39844151-39844224)
chr4 (286-359)||(47998699-47998771)
chr4 (291-359)||(53583026-53583094)
chr4 (281-359)||(6953275-6953354)
chr4 (280-359)||(15596501-15596580)
chr4 (286-357)||(51717177-51717248)
chr4 (286-359)||(31240753-31240827)
chr4 (286-359)||(36444288-36444361)
chr4 (286-358)||(51296070-51296142)
chr4 (304-359)||(9162171-9162226)
chr4 (288-359)||(46173642-46173713)
chr4 (286-359)||(22257089-22257162)
chr4 (288-358)||(37249015-37249085)
chr4 (281-359)||(38952794-38952872)
chr4 (277-358)||(24337240-24337321)
chr4 (287-359)||(36408098-36408170)
chr4 (287-359)||(36413221-36413293)
chr4 (319-359)||(49194988-49195028)
chr4 (299-359)||(53091136-53091196)
chr4 (286-345)||(1033267-1033326)
chr4 (281-351)||(1580170-1580241)
chr4 (281-359)||(38160660-38160739)
chr4 (287-349)||(525838-525900)
chr4 (282-316)||(3624351-3624385)
chr4 (278-359)||(33438150-33438231)
chr4 (286-349)||(34616464-34616519)
chr4 (286-359)||(10994046-10994118)
chr4 (318-359)||(34974558-34974599)
chr4 (281-358)||(35580216-35580293)
chr4 (277-359)||(40847474-40847554)
chr4 (288-359)||(2613511-2613583)
chr4 (287-359)||(3286923-3286995)
chr4 (288-316)||(25476769-25476797)
chr4 (278-358)||(40409051-40409131)
chr4 (331-359)||(52891792-52891820)
chr4 (286-314)||(56364159-56364187)
[»] scaffold0002 (1 HSPs)
scaffold0002 (289-359)||(6532-6602)
[»] scaffold0501 (1 HSPs)
scaffold0501 (281-359)||(10404-10482)
[»] scaffold0057 (1 HSPs)
scaffold0057 (279-358)||(38985-39064)
[»] scaffold0026 (1 HSPs)
scaffold0026 (286-359)||(113730-113803)
[»] scaffold0011 (1 HSPs)
scaffold0011 (319-359)||(219590-219630)
[»] scaffold0076 (1 HSPs)
scaffold0076 (304-359)||(11297-11352)
[»] scaffold0154 (1 HSPs)
scaffold0154 (281-359)||(9736-9814)
[»] scaffold0148 (1 HSPs)
scaffold0148 (279-357)||(9558-9636)
[»] scaffold0115 (1 HSPs)
scaffold0115 (286-359)||(15082-15154)
[»] scaffold0036 (1 HSPs)
scaffold0036 (286-359)||(18109-18181)
[»] scaffold0018 (1 HSPs)
scaffold0018 (286-358)||(36105-36180)
[»] scaffold0172 (1 HSPs)
scaffold0172 (282-359)||(17080-17158)
[»] scaffold0060 (1 HSPs)
scaffold0060 (286-359)||(6922-6995)
[»] scaffold0508 (1 HSPs)
scaffold0508 (286-359)||(11429-11502)
[»] scaffold0009 (1 HSPs)
scaffold0009 (286-359)||(190778-190851)
[»] scaffold0003 (1 HSPs)
scaffold0003 (286-359)||(119938-120011)


Alignment Details
Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43371273 - 43371168
Alignment:
Q  1 tcatcatgtaaatgattctgtgatttccttttcaagtgaatgcaaacttttggcatatgacataaagtttctactactcgtgaatgccttataacttttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43371273 tcatcatgtaaatgattctgtgatttccttttcaagtgaatgcaaacttttggcatatgacataaagtttctactactcgtgattgccttataacttttt 43371174  T
Q  101 tacaca 106  Q
    ||||||    
T  43371173 tacaca 43371168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 43371171 - 43371105
Alignment:
Q  161 cacaagaatatactagctagtatgtagagtagatgatggatttggctttcttttgattctcgtttctc 228  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43371171 cacaagaatatac-agctagtatgtagagtagatgatggatttggctttcttttgattctcgtttctc 43371105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 5378810 - 5378732
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||||||||||||||||||| || | | || ||||||||||||||||||||||||||||||||    
T  5378810 tgagtagtgatatttaaacatccatttgagacaacttttttaacaatttcttttctctctcttttcattggtcaaaaac 5378732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 2790363 - 2790282
Alignment:
Q  279 tttgagcagtgatatttgaacatc-catttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| ||||||||||||||| | ||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  2790363 tttgagtagtgatatttgaacaactcattttagacaacttatgtgacaacttcttttctctctcttttcattggtcaaaaac 2790282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 5978757 - 5978684
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||| ||| ||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  5978757 agtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctctcttttcattggtcaaaaac 5978684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 44894367 - 44894440
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||| || | |||||| |||||||||| ||||||||||||||||| ||||||    
T  44894367 agtgatatttgaacatccatttgagataatttttgtgacaacttcttttatctctcttttcattggtaaaaaac 44894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 359
Target Start/End: Original strand, 37856068 - 37856147
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| |||||||||| |||||| |||||| |||||| |||||||||  |||||| ||||||||||||||||||||||||    
T  37856068 ttgagtagtgatatttaaacatctatttgaaacaacttttgtgataatctcttttttctctcttttcattggtcaaaaac 37856147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 12142067 - 12141989
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||||||| |||||| |||||| ||||| |||| ||| ||||||||||||||||||||    
T  12142067 tgagtagtgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcattggtcaaaaac 12141989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 10591338 - 10591258
Alignment:
Q  278 ttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||| |||||||||| |||| | |||||||||| ||||||    
T  10591338 ttttgagtagtgatatttgaacaaccatttgagacaacttttgtgacaacttcttttttctcac-tttcattggtaaaaaac 10591258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 46651850 - 46651777
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||| ||| |||| |||||||| ||||||| || ||||||||||||||||||||||||    
T  46651850 agtgatatttgaacaaccatatgatacaattcttgtgacaacttctattttctctcttttcattggtcaaaaac 46651777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 48866823 - 48866896
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| |||||| |||||| ||| |||||| |||||||||||||| |||||||||    
T  48866823 agtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattagtcaaaaac 48866896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 280 - 359
Target Start/End: Original strand, 5198646 - 5198726
Alignment:
Q  280 ttgagcagtgatatttgaacatc-catttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||| | ||||| ||||||||  |||||||| ||||||| ||||||||||||| ||||||||||    
T  5198646 ttgagcagtgatatttgaacaactcattttagacaacttatgtgataatttcttttttctctcttttcatcggtcaaaaac 5198726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 21858930 - 21858852
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||||| | |||||| ||||||||||||||||| | || |||||||||| ||||||||    
T  21858930 tgagtagtgatatttgaacaaccattttaaacaacttttgtgataacttcttttttttcacttttcattgatcaaaaac 21858852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 25887766 - 25887688
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||||| |||||||| |||  | |||||||||| |||| |||||||||||||||||||    
T  25887766 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtcaaaaac 25887688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 34348920 - 34348993
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||| | |||||| || | | |||||||||||||||||||||||||||| ||||||    
T  34348920 agtgatatttgaacatctatttcatacaacttttttaacaacttcttttctctctcttttcattggtaaaaaac 34348993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 7990251 - 7990197
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctct 340  Q
    |||||||||||||||| |||||||||||||| |||||| |||||||| |||||||    
T  7990251 agtgatatttgaacattcatttgagacaactgttgtgacaacttcttctctctct 7990197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 155874 - 155947
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| |||||||| |||  | |||||||||| |||  |||||||||||||||||||    
T  155874 agtgatatttgaacaaccattttagacaacttttgatacaacttcttttttcttacttttcattggtcaaaaac 155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 12102610 - 12102675
Alignment:
Q  294 ttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||| |||||| |||||||| |||||| ||||| |||| ||||||||||||||||| ||||||    
T  12102610 ttgaacaaccatttcagacaacttttgtgacaacttattttttctctcttttcattggttaaaaac 12102675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 30180685 - 30180612
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| |||| | ||| || ||| |||||| ||||||||||||| ||||||||||    
T  30180685 agtgatatttgaacatctatttgaaacaatttttgcgacaacctcttttttctctcttttcatgggtcaaaaac 30180612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 37351883 - 37351956
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||||||| | |||| |||||| || ||||||| |||||||||| |||||||||||||    
T  37351883 agtgatatttgaacaatcatttgatataacttttgtgacaatttcttttttctctctttttattggtcaaaaac 37351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 47193105 - 47193032
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| ||| |||| |||  | |||||||||| |||| |||||||||||||||||||    
T  47193105 agtgatatttgaacaaccattttagataacttttggtacaacttcttttttctcacttttcattggtcaaaaac 47193032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 21752841 - 21752763
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||| |||||||||| | || ||| |||||| |||||| || || |||| ||||||||||||||||||||||||    
T  21752841 tgagtagtgttatttgaacaacaatatgaaacaacttttgtgacaatttattttttctctcttttcattggtcaaaaac 21752763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 40717126 - 40717204
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaac-tcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||| ||||||||||||||| |||||| | ||||| | |||||| |||||||||| |||||||||| |||||| |||||    
T  40717126 tgagtagtgatatttgaacaaccatttcatacaactttttgtgacaacttcttttttctctctttttattggttaaaaa 40717204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 8792495 - 8792563
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||||| |||||| |||||| ||   ||||| |||||||||||||| |||||||||    
T  8792495 tgatatttgaacaaccatttgatacaacttttgtgacaa---cttttttctctcttttcattagtcaaaaac 8792563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 33684858 - 33684785
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| | || ||| |||||| |||||| |||||||||| ||| ||||||||||||| ||||||    
T  33684858 agtgttatttgaacaactatatgaaacaacttttgtgacaacttcttttttctatcttttcattggtaaaaaac 33684785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 45607202 - 45607129
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||| ||| |||| |||  | |||||||||| |||| |||||||||||||||||||    
T  45607202 agtgatatttgaacaactattttagataacttttggtacaacttcttttttctcacttttcattggtcaaaaac 45607129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 7807233 - 7807161
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| ||| ||||||||||||||||  |||||||||| ||||||    
T  7807233 agtgatatttgaacaaccatttcatacaacttttgatgacaacttcttttctctct--tttcattggttaaaaac 7807161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 19426767 - 19426693
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattgg 351  Q
    |||||||| ||||||||||||||| |||||| | |||||| || |||| ||||| |||| ||||||||||||||||    
T  19426767 tttttgagaagtgatatttgaacaaccatttcatacaacttttggtgacaactt-ttttttctctcttttcattgg 19426693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 45432131 - 45432049
Alignment:
Q  277 tttttgagcagtgatatttgaacatc-catttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| || ||||||||||||||| | ||||| ||||||||  ||||| |||||||||| ||||| |||| |||||||||||||    
T  45432131 ttttttagtagtgatatttgaacaactcattttagacaacttatgtgacaacttcttttttctct-tttttattggtcaaaaac 45432049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 2414239 - 2414168
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | | ||||||||| |  ||||| ||||||||  |||||||||||||||||| ||||||    
T  2414239 agtgatatttgaacaactagttgagacaatttatgtgacaacttctt--ctctctcttttcattggttaaaaac 2414168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 7701492 - 7701437
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcatt 349  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  7701492 agtgatatttgaacatccatttgagacaa--------acaacttcttttctctctcttttcatt 7701437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 10656771 - 10656737
Alignment:
Q  325 aacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||| |||||||||    
T  10656771 aacttcttttctctctcttttcattagtcaaaaac 10656737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 42204658 - 42204692
Alignment:
Q  325 aacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| ||||||||||||||||||||||||    
T  42204658 aacttcttttttctctcttttcattggtcaaaaac 42204692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 46022377 - 46022432
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcatt 349  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  46022377 agtgatatttgaacatccatttgagacaa--------acaacttcttttctctctcttttcatt 46022432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 19510250 - 19510323
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||  ||| | |||||||| |||| | ||||| |||| ||||||||||||||| ||||||||    
T  19510250 agtgttatttgaacaatcatataagacaacttttgtaacaacttattttttctctcttttcattgatcaaaaac 19510323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 24700265 - 24700228
Alignment:
Q  320 gtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  24700265 gtgataacttcttttttttctcttttcattggtcaaaa 24700228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 41985029 - 41985070
Alignment:
Q  318 ttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| ||||||| |||||||||    
T  41985029 ttgtgataacttcttttttctctcctttcattagtcaaaaac 41985070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 43445585 - 43445516
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaa 355  Q
    |||||||||||||||  ||||||| |||| | |||||| || ||||||| ||| |||||| |||||||||    
T  43445585 agtgatatttgaacaatcatttgatacaatttttgtgacaatttcttttttctttctttttattggtcaa 43445516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 7077647 - 7077719
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| | |||| | |||||| |||||| ||||| ||||  ||| |||||||||||| ||||||    
T  7077647 gtgatatttgaacaactattttaaacaacttttgtgacaacttttttttcctcacttttcattggttaaaaac 7077719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 26041495 - 26041415
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||| ||||||||| |||||||||| | ||||||| | |||| |||||  ||| |||||||| | |||||||||||||    
T  26041495 ttgagcaatgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaac 26041415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 31982190 - 31982162
Alignment:
Q  331 ttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||    
T  31982190 ttttctctctcttttcattggtcaaaaac 31982162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 39875735 - 39875775
Alignment:
Q  319 tgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| || ||||||| ||||||||||||||||||||||||    
T  39875735 tgtgacaatttcttttttctctcttttcattggtcaaaaac 39875775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 41344562 - 41344635
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41344562 agtgatatttgaacatccatttgagacaactcttatgataacttcttttctctctcttttcattggtcaaaaac 41344635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 26871211 - 26871149
Alignment:
Q  297 aacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  26871211 aacatccatttgagacaactcttgtgacaatttcttttctctctcttttcattggtcaaaaac 26871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 23258210 - 23258137
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||||| |||| | |||||| |||||||||| ||||||||||||||||||||||||    
T  23258210 agtgatatttgaacaaccatttgaaacaatttttgtgacaacttcttttttctctcttttcattggtcaaaaac 23258137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 40413256 - 40413329
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||||| |||||| || |||||||||||||| |||||||||||||| |||||||||    
T  40413256 agtgatatttgaacaaccatttgatacaacttttatgataacttcttttttctctcttttcattagtcaaaaac 40413329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 359
Target Start/End: Original strand, 21648813 - 21648897
Alignment:
Q  276 atttttgagcagtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||| |||||||||| |||| ||||||||||||||| || |||| ||||| |||||||||||||||||||||| ||||||    
T  21648813 atttttgagtagtgatattttaacaaccatttgagacaacttttggtgacaacttattttctctctcttttcattggttaaaaac 21648897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 28927858 - 28927786
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| |||||||| | || | |||||| |||||||||||||||||||||||||||||||||||    
T  28927858 gtgatatttgaacaaccatttgataaaatttttgtgacaacttcttttctctctcttttcattggtcaaaaac 28927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 40102206 - 40102129
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||| |||| |||||||||| |||| |||||||||| |||||| ||||| |||||||||||||||||||||| |||||    
T  40102206 tgagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcattggtaaaaaa 40102129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 22767303 - 22767235
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| || | |||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  22767303 tatttgaacaaccgtatgagacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaac 22767235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 14029135 - 14029209
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| ||||||||||||||| ||| ||| ||||| |||||||||||||||||||||| ||||||    
T  14029135 agtgatattttaacaaccatttgagacaacttttggtgacaacttattttctctctcttttcattggttaaaaac 14029209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 5359516 - 5359443
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| |||||| |||||| ||  |||||| |||||||||| |||||||||||||    
T  5359516 agtgatatttgaacatctatttgaaacaacttttgtgacaatctcttttttctctctttttattggtcaaaaac 5359443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 24503095 - 24503022
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||| | ||||||||||||||| || ||| |||||| ||| ||||||||||||||||||||||||    
T  24503095 agtgttatttgaataaccatttgagacaacttttatgacaacttcatttttctctcttttcattggtcaaaaac 24503022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 37524321 - 37524394
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| | |||  |||||| ||| |||||| ||||||||||||||||||||||||    
T  37524321 agtgatatttgaacatctatttgaaataacctttgtgacaacctcttttttctctcttttcattggtcaaaaac 37524394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 38128419 - 38128492
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||| | |||||| |||||||||| |||| |||||||||||||||||||    
T  38128419 agtgatatttgaacaaccattttaaacaatttttgtgacaacttcttttttctcacttttcattggtcaaaaac 38128492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 276 - 359
Target Start/End: Original strand, 37101568 - 37101652
Alignment:
Q  276 atttttgagcagtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||| ||||||||||||||| |||||| | |||| | || |||| |||||||||| ||||||||||||||||| ||||||    
T  37101568 atttttgagtagtgatatttgaacaaccatttcatacaatttttcgtgacaacttcttttttctctcttttcattggttaaaaac 37101652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 7678908 - 7678837
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| | |||||| |||||| |||| | |||||||||| ||||||||||||||||| ||||||    
T  7678908 tgatatttgaacaactatttgatacaacttttgtaacaacttcttttttctctcttttcattggttaaaaac 7678837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 44103944 - 44103877
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataac-ttcttttctctctcttttcattggt 352  Q
    ||||||||||||||| |||||| ||| |||| |||||||||| || ||||||||||||||||||||||    
T  44103944 agtgatatttgaacaaccatttaagataactattgtgataacttttttttctctctcttttcattggt 44103877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 3989083 - 3989010
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||  ||||||||||  ||||| |||||||||| |||||||||||||| |||||||||    
T  3989083 agtgttatttgaacaaccaaatgagacaacttatgtgacaacttcttttttctctcttttcattagtcaaaaac 3989010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 896081 - 896012
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||    |||||||||||||| || | | |||||||||| ||||||||||||||||||||||||    
T  896081 agtgatatttgaa----catttgagacaacttttttaacaacttcttttttctctcttttcattggtcaaaaac 896012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 359
Target Start/End: Original strand, 43602309 - 43602389
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||| ||||||||| |||||||||| | ||||||| | |||| |||||  |||||||||||||| |||||||||||||    
T  43602309 ttgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaac 43602389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 3650298 - 3650219
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||| |||||||||| |||| |||||||||| |||| ||| ||| || || |||||||||||||||||||||| |||||    
T  3650298 ttgagtagtgatattttaacaaccatttgagataacttttggtgacaatttattttctctctcttttcattggttaaaaa 3650219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 27836354 - 27836287
Alignment:
Q  290 atatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||| |||| |  | |||||  ||||| |||||||||||||||||||||||||||||||||    
T  27836354 atatttgaacaaccatgttgggcaacttatgtgacaacttcttttctctctcttttcattggtcaaaa 27836287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 9963864 - 9963791
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| ||||||||| |||| ||||||||||||||||| ||||||    
T  9963864 agtgatatttgaacaaccattttatacaacttttgatgataacttttttt-tctctcttttcattggttaaaaac 9963791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 154468 - 154395
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| ||| || |||||||| |||||| |||||   || |||||||||| |||||||||||||    
T  154468 agtgatatttgaacaaccaattaagacaactattgtgacaactttcattttctctctttttattggtcaaaaac 154395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 295724 - 295651
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| | |||||||| |||| |||||| || || |||| ||||| ||||||||||||||||||    
T  295724 agtgttatttgaacaactatttgagataacttttgtgacaatttattttttctctattttcattggtcaaaaac 295651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 11223752 - 11223825
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  | |||||||||||| |||  | |||||||||| |||| |||||||||||| ||||||    
T  11223752 agtgatatttgaacaatcttttgagacaacttttggtacaacttcttttttctcacttttcattggtaaaaaac 11223825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 21273603 - 21273676
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||| | |||||| |||||| ||||| | || ||||||||||||||||| ||||||    
T  21273603 agtgatatttgaacaactatttcatacaacttttgtgacaacttttcttttctctcttttcattggttaaaaac 21273676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 44672126 - 44672199
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||   |||||| |||||| |||||| |  ||||||| ||||||||||||||||| ||||||    
T  44672126 agtgatatttgaacaattatttgatacaacttttgtgacacattcttttttctctcttttcattggttaaaaac 44672199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 426246 - 426206
Alignment:
Q  319 tgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  426246 tgtgacaacttcttttttctctcttttcattggtcaaaaac 426206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 5502540 - 5502465
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctc--tcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||||||| | || | |||||| |||||||| ||||||  ||||||||||||||||||||    
T  5502540 agtgatatttgaacaatcatttgatataatttttgtgacaacttcttctctctctatcttttcattggtcaaaaac 5502465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 24946181 - 24946107
Alignment:
Q  282 gagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||| |||||| |||||||| |||  | ||   ||||| |||| |||||||||||||||||||    
T  24946181 gagcagtgatatttgaacaaccattttagacaacttttggtacaa---cttttttctcacttttcattggtcaaaaac 24946107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 358
Target Start/End: Original strand, 26507829 - 26507868
Alignment:
Q  319 tgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  26507829 tgtgacaacttcttttttctctcttttcattggtcaaaaa 26507868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 42012515 - 42012554
Alignment:
Q  320 gtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  42012515 gtgacaacttcttttctctctcttttcattggttaaaaac 42012554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 359
Target Start/End: Original strand, 28473441 - 28473511
Alignment:
Q  289 gatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||  | ||||||||| | || | | |||||||||| ||||||||||||||||| ||||||    
T  28473441 gatatttgaacatttaattgagacaatttttttaacaacttcttttttctctcttttcattggtaaaaaac 28473511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 30925547 - 30925620
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| ||| ||||| |||| ||||||||||||||||| ||||||    
T  30925547 agtgatatttgaacaaccattttatacaacttttggtgacaacttttttt-tctctcttttcattggttaaaaac 30925620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 351
Target Start/End: Original strand, 42543373 - 42543439
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattgg 351  Q
    ||||||| ||||||| |||||| | |||||| ||| ||| |||||||||| ||||||||||||||||    
T  42543373 agtgataattgaacaaccatttcatacaacttttggtgacaacttcttttttctctcttttcattgg 42543439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 1370179 - 1370216
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaa 314  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  1370179 ttttagagtagtgatatttgaacatccatttgagacaa 1370216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 34474127 - 34474054
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttg-tgataacttctttt-ctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||| | |||||| ||| ||| |||||||||| |||||| ||||||||||| ||||||    
T  34474127 tgatatttgaacaaccatttcatacaacttttggtgacaacttctttttctctcttttttcattggttaaaaac 34474054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 357
Target Start/End: Original strand, 40713599 - 40713675
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||| |||||||||||||||  ||| |||||||| |  || |||||||| |||| | ||||||||||||||||||||    
T  40713599 ttgagtagtgatatttgaacaatcatgtgagacaatttatgcgataacttttttt-tatctcttttcattggtcaaaa 40713675  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 358
Target Start/End: Complemental strand, 42996601 - 42996568
Alignment:
Q  325 aacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||| |||||||||||||||||||||||    
T  42996601 aacttcttttttctctcttttcattggtcaaaaa 42996568  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 40604596 - 40604671
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttctttt--ctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||  |||||||| |  |||||||| |||||||  |||||||| ||||||||||||||||    
T  40604596 agtgttatttgaacaaccaaatgagacaatttatgtgataatttcttttttctctctctcttcattggtcaaaaac 40604671  T

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Target: chr3 (Bit Score: 69; Significance: 7e-31; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 19418054 - 19418126
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19418054 gtgatatttgaacatccatttgagacaactcttgtgacaacttcttttctctctcttttcattggtcaaaaac 19418126  T

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Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 41111965 - 41112038
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||||| || | | |||||||||||||||||||||||||||||||||||    
T  41111965 agtgatatttgaacatccatttgagacaacttttttaacaacttcttttctctctcttttcattggtcaaaaac 41112038  T

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Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 49131032 - 49130959
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| |||||||||    
T  49131032 agtgatatttgaacatccatttgagacaatttttgtgacaacttcttttctctctcttttcattagtcaaaaac 49130959  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 11173624 - 11173555
Alignment:
Q  290 atatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||| |||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  11173624 atatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaac 11173555  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 47849848 - 47849775
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| ||||||||||||| | | |||||| ||||||||||||||||||||||||    
T  47849848 agtgatatttgaacatctatttgaaacaactcttgtgacagcctcttttttctctcttttcattggtcaaaaac 47849775  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 46315850 - 46315917
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaa 355  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |||| ||| ||||||||||||||||    
T  46315850 tgatatttgaacatccattcgagacaactcttgtgacaactttttttatctttcttttcattggtcaa 46315917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 46473304 - 46473233
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||||| |||||| || ||| |||||||||| ||||||||||||||||||||||||    
T  46473304 tgatatttgaacaaccatttgatacaacttttatgacaacttcttttttctctcttttcattggtcaaaaac 46473233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 28300534 - 28300612
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||| ||| ||||||||||||| ||||| | || ||||||||||||||||||||||||    
T  28300534 tgagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttttattttctctcttttcattggtcaaaaac 28300612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 29706086 - 29706008
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| | |||||| |||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  29706086 tgagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggtaaaaaac 29706008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 7231899 - 7231972
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||||| |||||| |||||| || || |||| ||||||||||||||||||||||||    
T  7231899 agtgatatttgaacaaccatttgatacaacttttgtgacaatttattttttctctcttttcattggtcaaaaac 7231972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 20380782 - 20380855
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| |||||| |||||||||| |||| |||||||||||||||||||    
T  20380782 agtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcacttttcattggtcaaaaac 20380855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 291 - 359
Target Start/End: Original strand, 37215129 - 37215197
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| |||||||||| |||||| ||||| |||| ||||||||||||||||||||||||    
T  37215129 tatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttcattggtcaaaaac 37215197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 41957698 - 41957618
Alignment:
Q  279 tttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| |||||||||| |||| |||||| | |||||| ||||||||| ||||||| |||| |||||||||||||||||||    
T  41957698 tttgagtagtgatatttaaacaaccattttaaacaacttttgtgataatttcttttttctcacttttcattggtcaaaaac 41957618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 28269993 - 28269911
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| || |||| |||||||||| |||| |||||||||| ||| || |||||||||| ||| ||||||||||||||||||||    
T  28269993 ttttttagtagtgttatttgaacaaccatatgagacaacttttgcgacaacttcttttttctatcttttcattggtcaaaaac 28269911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 31997981 - 31997907
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| ||||||||||||||| ||| ||| ||||||||||||||||||||| ||| || ||||||    
T  31997981 agtgatatttgaacaaccatttgagacaacttttgatgacaacttcttttctctctctttttattagttaaaaac 31997907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 48649764 - 48649686
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||| |||||||||| |||| ||||| || | |||||||||||| |||||||||| ||||||||||||||||||    
T  48649764 tgagtagtgttatttgaacaaccatatgagataatttttgtgataacttattttctctcttttttcattggtcaaaaac 48649686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 32687854 - 32687926
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| | |||||| |||||| ||| |||||||||||||| ||||||||||||||||| ||||||    
T  32687854 tgatatttgaacaactatttgatacaacttttggtgataacttcttttttctctcttttcattggttaaaaac 32687926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 42475865 - 42475941
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||| |||| |||||||||| |||| | |||||||| |||||| ||||| |||| ||||||||||||||||||||||    
T  42475865 tgagtagtgttatttgaacaaccatataagacaacttttgtgaaaacttattttttctctcttttcattggtcaaaa 42475941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 33007548 - 33007465
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttct-ctctcttttcattggtcaaaaac 359  Q
    |||| ||| |||| |||||||||| |||| |||||||| | |||||| |||||||||| | |||||||||||||||||||||||    
T  33007548 ttttcgagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttctttttttctctcttttcattggtcaaaaac 33007465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 35272211 - 35272132
Alignment:
Q  281 tgagcagtgatatttgaaca-tccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| | ||||| ||||||||  ||||| |||||||||| |||||||||| |||||||||||||    
T  35272211 tgagtagtgatatttgaacaattcattttagacaacttatgtgacaacttcttttttctctctttttattggtcaaaaac 35272132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 37302962 - 37303040
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||| ||||||||||  ||| |||||||||| |||||| || ||||||| ||||||||||||||||| ||||||    
T  37302962 tgagtagtgttatttgaacaagcatatgagacaacttttgtgacaatttcttttttctctcttttcattggtaaaaaac 37303040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 9028051 - 9027978
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||||| || | | |||||| |||||| ||||||||| |||| |||||||||||||    
T  9028051 agtgatatttgaacaaccatttgatacgatttttgtgacaacttcgtttctctctatttttattggtcaaaaac 9027978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 39540408 - 39540341
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||| |||| ||||| || | ||||||||| || |||| |||||||||||||||||||||||    
T  39540408 tatttgaacaaccatatgagataatttttgtgataatttattttttctctcttttcattggtcaaaaa 39540341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 6126633 - 6126559
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| | | |||||||||| ||||||||||||||||| ||||||    
T  6126633 agtgatatttgaacaaccatttcatacaacttttggttacaacttcttttttctctcttttcattggttaaaaac 6126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 8066537 - 8066460
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||| ||||| ||||  ||| |||||||||| |||||| ||||| |||| ||||||||||||||||||||||||    
T  8066537 tgagtagtgttatttaaacaatcatatgagacaactattgtgacaacttatttt-tctctcttttcattggtcaaaaac 8066460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 7293992 - 7294065
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| |||||||| |||  | |||||||||| |||   ||||||||||||||||||    
T  7293992 agtgatatttgaacaaccattttagacaacttttgatacaacttcttttttcttatttttcattggtcaaaaac 7294065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 30839635 - 30839570
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattgg 351  Q
    |||||||||| ||||  ||| ||| ||||||||||||| ||||||| || ||||||||||||||||    
T  30839635 agtgatatttaaacaatcatatgatacaactcttgtgacaacttctattttctctcttttcattgg 30839570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 37303561 - 37303488
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| | || |||||||||| |||||| || || |||| ||||||||||||||| ||||||||    
T  37303561 agtgttatttgaacaactatatgagacaacttttgtgacaatttattttttctctcttttcattgatcaaaaac 37303488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 44365185 - 44365250
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattgg 351  Q
    |||||||||||||| |||||| | |||| | ||| ||| |||||||||||||||||||||||||||    
T  44365185 gtgatatttgaacaaccattttatacaatttttggtgacaacttcttttctctctcttttcattgg 44365250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 48946029 - 48945952
Alignment:
Q  282 gagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||  ||||||| |||| |  | |||||||||||||| ||||  ||||||||||||||||||    
T  48946029 gagcggtgatatttgaacaatcatttgaaacaatttatatgataacttcttttttctcaattttcattggtcaaaaac 48945952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 51673041 - 51672968
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| |||||||| |||  | |||||||||| | ||  ||||||||||||||||||    
T  51673041 agtgatatttgaacaaccattttagacaacttttggtacaacttcttttttttcagttttcattggtcaaaaac 51672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 5188389 - 5188341
Alignment:
Q  311 acaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  5188389 acaacttttgtgacaacttcttttttctctcttttcattggttaaaaac 5188341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 51650534 - 51650459
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttg-tgataacttctttt--ctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| |||||| | |||||| ||| ||| ||||||||||  |||||||||||||||||| ||||||    
T  51650534 gtgatatttgaacaaccatttcatacaacttttggtgacaacttcttttttctctctcttttcattggttaaaaac 51650459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 359
Target Start/End: Original strand, 52453978 - 52454058
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||| ||||||||| |||||||||| | ||||||| | |||| |||||  |||||||||||| | |||||||||||||    
T  52453978 ttgagcaatgatatttgtacatccatttcatgacaactttagtgacaactttgtttctctctcttcttattggtcaaaaac 52454058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 52727341 - 52727413
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||| |||||| |||||| |||| | |||||| ||  |||||| ||||| |||||||||||||||||    
T  52727341 agtgatatttaaacatctatttgaaacaatttttgtgacaatctcttttttctctattttcattggtcaaaaa 52727413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 31249209 - 31249288
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||||| | |||||| || |||| ||||| |||| | ||||||||||||||| ||||||    
T  31249209 tgaggagtgatatttgaacaaccatttcatacaacttttggtgacaactttttttttttctcttttcattggttaaaaac 31249288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 41877502 - 41877577
Alignment:
Q  286 agtgatatttgaaca-tccatttgagacaactcttgtgataacttctttt-ctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| | ||||| ||||||||  ||||| || ||||||| |||||||||||||||||||||||||    
T  41877502 agtggtatttgaacaattcattttagacaacttatgtgacaatttctttttctctctcttttcattggtcaaaaac 41877577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 3730961 - 3731035
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||  ||||||||||||||  ||| ||| || || |||||||||||||||||||||| ||||||    
T  3730961 agtgatattttaacgaccatttgagacaacgtttggtgacaatttattttctctctcttttcattggttaaaaac 3731035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 5350482 - 5350409
Alignment:
Q  286 agtgatatttgaacatccatttg--agacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||||||| |||| ||  ||||||||  ||| ||||||| |||| |||||||||||||| |||||||    
T  5350482 agtgatatttgaacaaccatatgtgagacaacttatgtaataacttattttatctctcttttcattagtcaaaa 5350409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 316
Target Start/End: Original strand, 20162588 - 20162618
Alignment:
Q  286 agtgatatttgaacatccatttgagacaact 316  Q
    |||||||||||||||||||||||||||||||    
T  20162588 agtgatatttgaacatccatttgagacaact 20162618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 34733182 - 34733259
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||||| |||||| |||||| ||| || ||  |||||| ||||| ||||| ||||||||||||    
T  34733182 tgagtagtgatatttgaacatctatttgaaacaacttttgagacaatctcttttttctcttttttc-ttggtcaaaaac 34733259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 39604178 - 39604212
Alignment:
Q  325 aacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| ||||||||||||||||||||||||    
T  39604178 aacttcttttttctctcttttcattggtcaaaaac 39604212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 44695190 - 44695116
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataactt-cttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||||||||| ||  |||| ||||| ||||||||||| ||||||    
T  44695190 agtgatatttgaacaaccatttcatacaacttttgtgataatttatttttttctcttttttcattggttaaaaac 44695116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 47723287 - 47723230
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctctttt 345  Q
    |||||||||||||  ||| ||| ||||||||||||||||||||| || ||||| ||||    
T  47723287 tgatatttgaacaatcatatgatacaactcttgtgataacttctattttctctttttt 47723230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 23592415 - 23592387
Alignment:
Q  286 agtgatatttgaacatccatttgagacaa 314  Q
    |||||||||||||||||||||||||||||    
T  23592415 agtgatatttgaacatccatttgagacaa 23592387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 41877873 - 41877793
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||| ||||||||| |||||||||| | ||||||| | |||| |||||  ||| ||||| |||| |||||||||||||    
T  41877873 ttgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaac 41877793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 40610413 - 40610334
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  40610413 ttgagtagtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaac 40610334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 46948157 - 46948084
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  46948157 agtgatatttgaacatccatttgagacaactcttgtgacaacttcttttctctatcttttcattggtcaaaaac 46948084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 36690453 - 36690538
Alignment:
Q  274 atatttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||| |||| |||||||||| |||| |||||||||| |||||| ||||| |||||||||| ||||||||||||||||||    
T  36690453 atattattgagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctattttcattggtcaaaaac 36690538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 36706554 - 36706639
Alignment:
Q  274 atatttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||| |||| |||||||||| |||| |||||||||| |||||| ||||| |||||||||| ||||||||||||||||||    
T  36706554 atattattgagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctattttcattggtcaaaaac 36706639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 28253188 - 28253120
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  28253188 tatttgaacaaccatatgagacaacttttgtaacaacttcttttctctctcttttcattggtcaaaaac 28253120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 39010992 - 39010919
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| |||||||||| |||||| ||||| |||| ||||||||||||||||||||||||    
T  39010992 agtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttcattggtcaaaaac 39010919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 50659085 - 50659158
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| ||| ||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  50659085 agtgttatttgaacaaccatatgaaacaacttatgtgacaacttcttttctctctcttttcattggtcaaaaac 50659158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 359
Target Start/End: Original strand, 50061862 - 50061942
Alignment:
Q  279 tttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||  |||||| |||| |||| | | ||||||||||||||||||||| |||| ||||||||    
T  50061862 tttgagcagtgatatttgaacatttatttgaaacaattcttataacaacttcttttctctctctttttattgatcaaaaac 50061942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 7645442 - 7645518
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||||||||||||||||| | || | | |||||||||  ||||||||||||||||||||||||    
T  7645442 tgagtagtgatatttgaacatccatttgagacaatttttttaacaacttcttt--tctctcttttcattggtcaaaaac 7645518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 288 - 358
Target Start/End: Original strand, 22389421 - 22389490
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||||||| ||||||||  ||||| |||||| |||||||||| |||||||||||||||||||||||    
T  22389421 tgatatttgaacaaccatttgat-caacttttgtgacaacttcttttttctctcttttcattggtcaaaaa 22389490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 36418251 - 36418185
Alignment:
Q  292 atttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||| | |||||| |||||| |||||| |||||||||||||||||||||||||||| |||||    
T  36418251 atttgaacaactatttgatacaacttttgtgacaacttcttttctctctcttttcattggttaaaaa 36418185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 30631738 - 30631811
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| |||||||| |||  | |||||||||| |||| |||||||||||||||||||    
T  30631738 agtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtcaaaaac 30631811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 50141828 - 50141901
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| | || |||||||||| |||||| || || |||||||||||||||||||||||||||||    
T  50141828 agtgttatttgaacaactatatgagacaacttttgtgacaatttattttctctctcttttcattggtcaaaaac 50141901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 2362547 - 2362476
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||||||| | |||||| |||| | |||||| |||||||||||||||| ||||||||||| ||||    
T  2362547 agtgatatttgaacaactatttgatacaatttttgtgacaacttcttttctctcttttttcattggttaaaa 2362476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 34187442 - 34187371
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||||||| |||| |||||||| |  ||||| ||||||| || ||||||||||||||||||||||    
T  34187442 agtgatatttgaacaaccatgtgagacaatttatgtgacaacttctcttttctctcttttcattggtcaaaa 34187371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 359
Target Start/End: Original strand, 35846203 - 35846285
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| || ||| ||||||||||| |||||| |||||||| |||  | |||||||||| |||| |||||||||||||||||||    
T  35846203 ttttttagtagtcatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtcaaaaac 35846285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 43755581 - 43755627
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttctttt 334  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  43755581 tgatatttgaacatccatttgagacaactcttgtgacaacttttttt 43755627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 51703005 - 51703077
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| |||||||| ||||||||| || |||| ||| ||||||||||||| ||||||    
T  51703005 agtgatatttgaacaaccatttcagacaacttttgtgataattttttttttct-tcttttcattggttaaaaac 51703077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 31290102 - 31290174
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| |||||| | |||||| |||||| ||||| |||| ||||| ||||||||||| ||||||    
T  31290102 gtgatatttgaacaaccatttcacacaacttttgtgacaacttattttttctcttttttcattggttaaaaac 31290174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 304 - 352
Target Start/End: Complemental strand, 37690575 - 37690527
Alignment:
Q  304 atttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  37690575 atttgatacaacttttgtgacaacttcttttctctctcttttcattggt 37690527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 38913734 - 38913694
Alignment:
Q  318 ttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  38913734 ttgtgataacttattttctctctcttttcattggtcaaaaa 38913694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 358
Target Start/End: Complemental strand, 51571603 - 51571534
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||||||| |||||| | |||||| |||||| |||||||||  | |||||||||||||||||||||    
T  51571603 gtgatatttgaacaaccatttaatacaacttttgtgacaacttcttt--tttctcttttcattggtcaaaaa 51571534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 5477074 - 5477129
Alignment:
Q  304 atttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| |||||| |||||| |||||||||| |||||||||| |||||||||||||    
T  5477074 atttgatacaacttttgtgacaacttcttttttctctctttttattggtcaaaaac 5477129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 7503650 - 7503571
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||||||||||||||| |||||| | |||||| || |||| || || |||| ||||||||||||||||| |||||    
T  7503650 ttgagcagtgatatttgaacaaccatttcatacaacttttggtgacaattttttttttctctcttttcattggttaaaaa 7503571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 359
Target Start/End: Original strand, 45272041 - 45272126
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactctt-gtgataac--ttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||| ||||||||||||||| |||||| | |||||| || ||||||||  || |||| ||||||||||||||||| ||||||    
T  45272041 tttttgaggagtgatatttgaacaaccatttcatacaacttttggtgataactttttttttttctctcttttcattggttaaaaac 45272126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 29264179 - 29264110
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||||| | || ||  ||||||  |||||||| |||||||||||||||||| |||||||||||    
T  29264179 tgatatttgaacaactatgtggaacaacttatgtgataatttcttttctctctctttttattggtcaaaa 29264110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 366830 - 366762
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||  ||||||||||  ||||| ||||| ||||  |||||||||||||||||||||||    
T  366830 tatttgaacaaccaaatgagacaacttatgtgacaacttttttttcctctcttttcattggtcaaaaac 366762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 10384673 - 10384633
Alignment:
Q  319 tgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  10384673 tgtgacaacttcttttctcactcttttcattggtcaaaaac 10384633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 20268412 - 20268464
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctct 340  Q
    |||||||| |||| ||||||||||||||| || |||||||||| |||||||||    
T  20268412 tgatattttaacaaccatttgagacaacttttatgataacttcatttctctct 20268464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 359
Target Start/End: Original strand, 28703011 - 28703091
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||| || |||| |||||||||| || | || |||| ||||| |||||||||||||||||||||| ||||||    
T  28703011 ttgagtagtgataatttaacaaccatttgagataattttttgtgacaacttattttctctctcttttcattggttaaaaac 28703091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 31817289 - 31817360
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||||||||||||||||||||| | || | | || ||||||| ||| | ||||||||||| |||||    
T  31817289 gtgatatttgaacatccatttgagacaatttttttaacaatttcttttttctttattttcattggtaaaaaa 31817360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 37516094 - 37516024
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    |||| ||||||||||||||| ||| ||||||||| |  ||||| ||||| |||| |||||||||||||||||    
T  37516094 tgagtagtgatatttgaacaaccacttgagacaattactgtgacaactt-ttttttctctcttttcattggt 37516024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 49453655 - 49453585
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||| |||||| |||||| ||   ||||| ||||||||||||||||| ||||||    
T  49453655 agtgatatttgaacaactatttgatacaacttttgtgacaa---cttttttctctcttttcattggttaaaaac 49453585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 25302537 - 25302611
Alignment:
Q  286 agtgatatttgaacatc-catttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | ||||| |||||| |  ||||| ||||| |||| ||||||||||||||||| ||||||    
T  25302537 agtgatatttgaacaactcattttagacaatttatgtgacaactttttttttctctcttttcattggttaaaaac 25302611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 46907154 - 46907099
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcatt 349  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  46907154 agtgatatttgaacatccatttgagacaa--------acaacttcttttctctctcttttcatt 46907099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 351
Target Start/End: Original strand, 48872844 - 48872909
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattgg 351  Q
    ||||||||||||||| |||||| | |||||| ||| ||| ||||| |||||||||||||||||||||    
T  48872844 agtgatatttgaacaaccatttcatacaacttttggtgacaactt-ttttctctctcttttcattgg 48872909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 50226772 - 50226846
Alignment:
Q  286 agtgatatttgaaca-tccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | ||||| ||||||||  ||||||||||| |||| |||||| ||| |||||| ||||||    
T  50226772 agtgatatttgaacaattcattttagacaacttatgtgataacttattttttctctcattttattggtaaaaaac 50226846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 1615215 - 1615142
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| ||||| |||| |||||| ||||| | || ||||||||||||| ||| ||||||    
T  1615215 agtgttatttgaacaaccatatgagataacttttgtgacaacttatattttctctcttttcataggtaaaaaac 1615142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 323
Target Start/End: Complemental strand, 28716321 - 28716284
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtga 323  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  28716321 agtgatatttgaacaaccatttgagacaacttttgtga 28716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 45042438 - 45042366
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||  ||||||||||  ||||||||| | |||| | ||||||||||||||||||||||    
T  45042438 agtgttatttgaacaaccaaatgagacaacttatgtgataacctttttttt-tctcttttcattggtcaaaaac 45042366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 45740437 - 45740510
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||||||| | || | || ||| |||||||||| ||||  ||||||||||||||||||    
T  45740437 agtgatatttgaacaatcatttgaaataatttttatgacaacttcttttttctcaattttcattggtcaaaaac 45740510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 16836032 - 16836080
Alignment:
Q  311 acaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| |||||| |||||||||| |||  |||||||||||||||||||    
T  16836032 acaacttttgtgacaacttcttttttcttacttttcattggtcaaaaac 16836080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 24981679 - 24981707
Alignment:
Q  286 agtgatatttgaacatccatttgagacaa 314  Q
    |||||||||||||||||||||||||||||    
T  24981679 agtgatatttgaacatccatttgagacaa 24981707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 22390327 - 22390257
Alignment:
Q  289 gatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22390327 gatatttgaacatccatttgagacaactcttgtgacaacttcttttctctctcttttcattggtcaaaaac 22390257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 23344877 - 23344955
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  23344877 tgagtagtgatatttgaacattcatttgagacaactcttctgacaacttcttttctctctcttttcattggtcaaaaac 23344955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 2013178 - 2013251
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  2013178 agtgatattttaacatccatttgagacaactcttgtgacaacttattttctctctcttttcattggtcaaaaac 2013251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 14714170 - 14714091
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||    
T  14714170 ttgagtagtgatatttgaacatccatttgagacaatttttgtgacaacttcttttctctctcttttcattgatcaaaaac 14714091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 25801704 - 25801777
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  25801704 agtgatatttgaacaacaatttgagacaacttttgtgatcacttcttttttctctcttttcattggtcaaaaac 25801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 34442300 - 34442218
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||| ||||||||||||||||| |||||| |||| | || ||| ||| ||||||||||||||||| |||||||||||||    
T  34442300 tttttgagtagtgatatttgaacatctatttgaaacaatttttctgacaacctcttttctctctctttttattggtcaaaaac 34442218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 44190003 - 44189936
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaa 355  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||||||  |||||||||||||||||    
T  44190003 agtgatatttgaacatccattcgagacaactcttgtgacaacatcttttct--ctcttttcattggtcaa 44189936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 3091919 - 3091846
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||   |||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  3091919 agtgatatttgaacaattatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaac 3091846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 7086017 - 7086090
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| |||||||| | |||||| ||||| |||||||||||||||||||||||||||||    
T  7086017 agtgttatttgaacaaccatatgagacaatttttgtgacaacttattttctctctcttttcattggtcaaaaac 7086090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 29795614 - 29795541
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| |||||| |||||| |||  ||||| ||||||||||||||||||||||||    
T  29795614 agtgatatttgaacatcaatttgaaacaacttttgtgacaaccacttttttctctcttttcattggtcaaaaac 29795541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 11164270 - 11164342
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| | |||||| |||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  11164270 gtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaac 11164342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 6365370 - 6365291
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||| |||| | |||||| || ||| ||| |||||| |||||||||| |||||||||||||    
T  6365370 ttgagcagtgatatttgaacatctatttaaaacaacttttatgacaacctcttttttctctctttttattggtcaaaaac 6365291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 11229209 - 11229287
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||||| |||||||| |||  | |||||||||| |||| |||||||||||||||||||    
T  11229209 tgagtagtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtcaaaaac 11229287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 13104657 - 13104584
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| |||||||| | |||||| ||||| |||| ||||||||||||||||||||||||    
T  13104657 agtgttatttgaacaaccatatgagacaatttttgtgacaacttattttttctctcttttcattggtcaaaaac 13104584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 32750176 - 32750103
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| |||||||| | |||||| ||||| |||| ||||||||||||||||||||||||    
T  32750176 agtgttatttgaacaaccatatgagacaatttttgtgacaacttattttttctctcttttcattggtcaaaaac 32750103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 43725387 - 43725310
Alignment:
Q  282 gagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||||||| |||||| |||||||| |||  | |||||||||| |||| |||||||||||||||||||    
T  43725387 gagcggtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtcaaaaac 43725310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 36435857 - 36435786
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||  |||||| |||||| |||||| ||| |||||||||||||||||||||| | ||||||    
T  36435857 tgatatttgaacatttatttgaaacaacttttgtgacaacctcttttctctctcttttcattgataaaaaac 36435786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 12600226 - 12600160
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    ||||||||||||||| | |||| | |||||| |||||| |||||||||| |||||||||||||||||    
T  12600226 agtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcattggt 12600160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 14140227 - 14140305
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||||||||  ||||| | | |||| |||||| || ||||||| ||||||||||||||||||||||||    
T  14140227 tgagtagtgatatttgaacaatcatttaaaataacttttgtgacaatttcttttttctctcttttcattggtcaaaaac 14140305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 36133152 - 36133086
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    ||||||||||||||| | |||| | |||||| |||||| |||||||||| |||||||||||||||||    
T  36133152 agtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcattggt 36133086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 6639365 - 6639438
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||  ||||| ||||  ||||| |||||||||||||||||||||||||||| ||||||    
T  6639365 agtgttatttgaacaaccaaatgagataacttatgtgacaacttcttttctctctcttttcattggtaaaaaac 6639438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 13711239 - 13711166
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | ||||   |||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  13711239 agtgatatttgaacaactattttgtacaacttttgtgacaacttcttttttctctcttttcattggttaaaaac 13711166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 36376744 - 36376817
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| | |||||| || | || | | |||||||||| ||||||||||||||||||||||||    
T  36376744 agtgatatttgaacatctaattgagataatttttttaacaacttcttttttctctcttttcattggtcaaaaac 36376817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 39454140 - 39454213
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| |||| | ||| || ||  |||||| ||||||||||||||||||||||||    
T  39454140 agtgatatttgaacatctatttgaaacaagttttgagacaatctcttttttctctcttttcattggtcaaaaac 39454213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 42081215 - 42081142
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||  ||||||||||| | || | | |||||||||| ||||| ||||||||||||||||||    
T  42081215 agtgatatttgaacattaatttgagacaatttttttaacaacttcttttttctctattttcattggtcaaaaac 42081142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 31296736 - 31296807
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||||| | |||| || |||||||  ||||| || ||||||| ||||||||||||||||||||||    
T  31296736 agtgatatttgaataaccatatgggacaacttatgtgacaatttcttttttctctcttttcattggtcaaaa 31296807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 42251813 - 42251884
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||||||||| ||||  ||||||  ||||||  ||||| |||||||||| ||||||||||||||||||||||    
T  42251813 agtgatatttaaacaatcatttggaacaacttatgtgacaacttcttttttctctcttttcattggtcaaaa 42251884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 5455341 - 5455419
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||| ||||||||||| |||||| | |||||| ||| | ||| ||||||| ||||||||||||||||| ||||||    
T  5455341 tgagtagtaatatttgaacaaccattttatacaacttttggggtaatttcttttttctctcttttcattggttaaaaac 5455419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 19695580 - 19695657
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||| |||||||||| |||  ||||||||||  ||||| ||||| ||||| |||||||||||||||||||||||    
T  19695580 tgagtagtgttatttgaacaaccaaatgagacaacttatgtgacaactttttttc-ctctcttttcattggtcaaaaac 19695657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 23045339 - 23045269
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaa 356  Q
    |||| |||||||||| |||  ||||||||||  ||||| |||||||||| ||||| |||||||||||||||    
T  23045339 agtgttatttgaacaaccaaatgagacaacttatgtgacaacttcttttttctctattttcattggtcaaa 23045269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 34249759 - 34249685
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttct-ctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| |||||||| | |||||| ||||| |||| | |||||||||||||||||||||||    
T  34249759 agtgttatttgaacaaccatatgagacaatttttgtgacaacttatttttttctctcttttcattggtcaaaaac 34249685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 359
Target Start/End: Original strand, 37631251 - 37631333
Alignment:
Q  278 ttttgagcagtgatatttgaacatccatttgaga-caactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||| ||||||||||||| |||||||  | ||||| || ||| ||| |||||| |||||||| |||||||||||||||    
T  37631251 ttttgagcaatgatatttgaacaaccatttgctaacaacttttatgacaacctcttttttctctcttctcattggtcaaaaac 37631333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 1889333 - 1889252
Alignment:
Q  278 ttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||| | || ||||||||||  ||  |||||||| |  ||||| |||||||||| ||||||||||||||||||||||||    
T  1889333 ttttgagtaatgttatttgaacaatcaaatgagacaatttatgtgacaacttcttttttctctcttttcattggtcaaaaac 1889252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 359
Target Start/End: Original strand, 5067526 - 5067607
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgat-aacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||| |||||||||||||||  ||||| |||||||| |||  || |||||||||| |||| |||||||||||||||||||    
T  5067526 ttttggagtagtgatatttgaacaatcattttagacaacttttg--atcaacttcttttttctcacttttcattggtcaaaaac 5067607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 45515494 - 45515565
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||| | |||||| ||| ||| |||||||||| ||||||||||||||||| ||||||    
T  45515494 tgatatttgaacaaccatttcatacaacttttggtgacaacttctttt-tctctcttttcattggttaaaaac 45515565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 15019031 - 15019110
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| ||||||||| ||||| ||| ||| ||||| |||| ||||| |||| |||||| ||||||    
T  15019031 tgaggagtgatatttgaacaaccatttgaggcaacttttgatgacaactttttttttctctttttttattggttaaaaac 15019110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 358
Target Start/End: Complemental strand, 23880268 - 23880201
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||| |||| |||||||||| || ||| || || |||| ||||||||||||||||| |||||    
T  23880268 tatttgaacaaccatatgagacaacttttatgacaatttattttttctctcttttcattggtaaaaaa 23880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 15141601 - 15141567
Alignment:
Q  325 aacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||| |||||||||    
T  15141601 aacttcttttctctctcttttcattagtcaaaaac 15141567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 19913963 - 19913889
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| | | ||| ||||| |||| ||||||||||||||||| ||||||    
T  19913963 agtgatatttgaacaaccatttcatacaactttcggtgacaactttttttttctctcttttcattggttaaaaac 19913889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 25270692 - 25270747
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcatt 349  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  25270692 agtgatatttgaacatccatttgagacaa--------acaacttcttttctctctcttttcatt 25270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 26321590 - 26321663
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||||| | |||||| ||| ||||||||| |||| ||||||||||||||||| ||||||    
T  26321590 agtgatatttgaacaatcatttcatacaacttttggtgataacttttttt-tctctcttttcattggttaaaaac 26321663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Complemental strand, 2464313 - 2464272
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataactt 329  Q
    |||||||||||||||||||||| |||||| |||||| |||||    
T  2464313 tgatatttgaacatccatttgatacaacttttgtgacaactt 2464272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 3960078 - 3960001
Alignment:
Q  283 agcagtgatatttgaacatccatttgaga-caactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||| ||||||| || ||||| || ||| || ||| ||| ||||||||||||||| ||||||||    
T  3960078 agcaatgatatttgaacaaccatttgcgaacaacttttatgacaatttcatttttctctcttttcattgatcaaaaac 3960001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 12962564 - 12962491
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||| | || | |||| | || |||||||||||||||||| |||||| ||||||    
T  12962564 agtgatatttgaacaactatttgatataaattttgtaacaatttcttttctctctcttttaattggttaaaaac 12962491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 43650442 - 43650511
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||||||| ||||  ||||||| ||||||  ||||| || ||||||| |||||||||| |||||||||||    
T  43650442 tgatatttaaacaatcatttgatacaacttatgtgacaatttcttttttctctctttttattggtcaaaa 43650511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 19668082 - 19668153
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataac-ttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||||| |||||   | ||||||| ||| ||| ||||||||||||||||||||||||    
T  19668082 tgatatttgaacaaccatttgatacaacctatttgataaccttccttt-tctctcttttcattggtcaaaaac 19668153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 4834918 - 4834991
Alignment:
Q  282 gagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaa 355  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4834918 gagcaatgatatttgaacatctatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaa 4834991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 20719908 - 20719980
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  20719908 agtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaa 20719980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 34767313 - 34767382
Alignment:
Q  289 gatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34767313 gatatttgaacatctatttgagacaactcttgtgacaacttcttttctctctcttttcattggtcaaaaa 34767382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 279 - 359
Target Start/End: Complemental strand, 39595459 - 39595379
Alignment:
Q  279 tttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| | ||||||||||||| |||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  39595459 tttgagtaatgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaac 39595379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 125279 - 125197
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| || ||||||||||||||| |||||||| |||||| ||| || |||||||||| ||||||||||||||||||||||||    
T  125279 ttttttagtagtgatatttgaacaaccatttgatacaacttttgcgacaacttcttttttctctcttttcattggtcaaaaac 125197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 31284282 - 31284360
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||| |||||| | |||||| ||| || |||||||||||||||||||||||||||| ||||||    
T  31284282 tgagcagtgatatttgaacaaccatttcatacaacttttgcgacaacttcttttctctctcttttcattggttaaaaac 31284360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 24431506 - 24431577
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    |||| ||||||||||||||| ||||||||||||||| |||||| |||||| ||| |||||||||||||||||    
T  24431506 tgagtagtgatatttgaacaaccatttgagacaactattgtgacaacttcatttttctctcttttcattggt 24431577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 28811606 - 28811533
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| ||| |||||| |||||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  28811606 agtgatatttgaatatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaac 28811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 33567132 - 33567205
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||| |||||| |||||||| |||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  33567132 agtgatatatgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaac 33567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 12718268 - 12718346
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| ||||||   |||| | |||||| |||||||||||||| ||||||||||||||||||||    
T  12718268 tgagtagtgatatttgaacaaccattttcaacaatttttgtgacaacttcttttctctttcttttcattggtcaaaaac 12718346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 40566109 - 40566183
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttctt-ttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||||| || | | ||||| || || ||||||||||||||||||||||||    
T  40566109 agtgatatttgaacatccatttgagacaacttttttaacaactttttattttctctcttttcattggtcaaaaac 40566183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 2117533 - 2117606
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||| |||||| |||||| |||||||||| ||||| ||||||||||| ||||||    
T  2117533 agtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctcttttttcattggttaaaaac 2117606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 11306874 - 11306801
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||| |||||| ||| || |||||||||| ||||||||||||||||| ||||||    
T  11306874 agtgatatttgaacaactatttgatacaacttttgagacaacttcttttttctctcttttcattggttaaaaac 11306801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 27392595 - 27392668
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| |||||||||| |||||| ||||| |||| | ||||||||||||||||||||||    
T  27392595 agtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttttctcttttcattggtcaaaaac 27392668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 34381189 - 34381117
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| |||||||| | || | |||||| |||||| ||| ||||||||||||||||||||||||    
T  34381189 gtgatatttgaacaaccatttgatataatttttgtgacaacttcgtttttctctcttttcattggtcaaaaac 34381117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 9714023 - 9714102
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctc-ttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||| ||| ||||||||||||| ||||||| || ||| || ||||||||||||||||||    
T  9714023 tgagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctatctttttcattggtcaaaaac 9714102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 12779494 - 12779572
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||| | ||||||   |||| | |||||| |||||||||||||| ||||||||||||||||||||    
T  12779494 tgagtagtgatatttgaataaccattttcaacaatttttgtgacaacttcttttctctttcttttcattggtcaaaaac 12779572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 10232687 - 10232606
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||||||| ||||||||||||||| | |||| | |||||| ||| ||| |||||||||| ||||||||||||||||| ||||    
T  10232687 tttttgagtagtgatatttgaacaactattttatacaacttttggtgacaacttcttttttctctcttttcattggttaaaa 10232606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 19376025 - 19376098
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| | |  ||||||||||  ||||| |||||||||| ||||||||||||||||||||||||    
T  19376025 agtgttatttgaacaactaaatgagacaacttatgtgacaacttcttttttctctcttttcattggtcaaaaac 19376098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 11666352 - 11666284
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||| | |||| ||||| |||| |||| | |||||||||| ||||||||||||||||||||||||    
T  11666352 tatttgaaaaaccatatgagataacttttgtaacaacttcttttttctctcttttcattggtcaaaaac 11666284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 34400791 - 34400722
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||| |||||||||||||||||  || |||| ||| | |||| |||||||||||||    
T  34400791 tgatatttgaacatccatttaagacaactcttgtgata--tttttttatctttttttttattggtcaaaaac 34400722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 30334645 - 30334728
Alignment:
Q  274 atatttttgagcagtgatatttgaacatccatttgagacaactcttgtgataac-ttct-tttctctctcttttcattggtcaa 355  Q
    ||||||| ||| ||| |||||||||||  ||||||||||||||||||||| ||| |||| | ||||||||| ||||||||||||    
T  30334645 atattttagaggagtaatatttgaacactcatttgagacaactcttgtgacaactttctctctctctctctcttcattggtcaa 30334728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 33243636 - 33243707
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||| ||| |||| |||||| || || |||| ||||||||||||||||| ||||||    
T  33243636 tgatatttgaacaaccatttcagataacttttgtgacaatttattttttctctcttttcattggttaaaaac 33243707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 11767883 - 11767949
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    ||||||||||||||| |||||| |||||||| |||  | |||||||||| |||| ||||||||||||    
T  11767883 agtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggt 11767949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 29402359 - 29402289
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||| |||||||| |||| ||||||||||  ||||| |||||||||| ||| |||||| |||||||||||    
T  29402359 gtgatgtttgaacaaccatgtgagacaacttatgtgacaacttcttttttctttctttttattggtcaaaa 29402289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 42909858 - 42909824
Alignment:
Q  325 aacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||||||||    
T  42909858 aacttcttttctctctcttttcattggtcaaaaac 42909824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 19127302 - 19127229
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| || |||||||||| ||||  |||||||||||| |||||    
T  19127302 agtgatatttgaacaaccattttaaacaacttttgcgacaacttcttttttctcatttttcattggtccaaaac 19127229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 29498301 - 29498232
Alignment:
Q  290 atatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||  |||||||||||| | || ||| ||||| ||||||||||||||| ||| |||||||||    
T  29498301 atatttgaacaatcatttgagacaaattttatgacaacttattttctctctctttttattagtcaaaaac 29498232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 3141680 - 3141602
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||| ||||||||||||||| |||||| | |||||| ||| ||| ||||| |||| ||||||||||||||||| |||||    
T  3141680 ttgagtagtgatatttgaacaaccatttcatacaacttttgatgacaactt-ttttttctctcttttcattggttaaaaa 3141602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 12661840 - 12661911
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||||||||||||| | |||| | |||||| ||| ||| |||||||||| ||||||||||||||||| ||||    
T  12661840 gtgatatttgaacaactatttcatacaacttttggtgacaacttcttttttctctcttttcattggttaaaa 12661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 5130270 - 5130344
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||| | |||| | || |||| |||||||||| ||||||||||||||||| ||||||    
T  5130270 agtgatatttgaacaactatttcatacaattttttgtgacaacttcttttttctctcttttcattggttaaaaac 5130344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 7077226 - 7077304
Alignment:
Q  281 tgagcagtgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||| ||||||||| |||||||||| | ||||||| | |||| |||||  ||| |||||||||| ||||||||||||    
T  7077226 tgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaaa 7077304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 13613856 - 13613930
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||||| | |||||| ||| ||| || ||||||| ||||||||||||||||| ||||||    
T  13613856 agtgatatttgaacaatcatttcatacaacttttggtgacaatttcttttttctctcttttcattggttaaaaac 13613930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 32536986 - 32536921
Alignment:
Q  293 tttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||| | ||||||||||||| ||||||||| || |||||||| |||||| |||| ||||||||    
T  32536986 tttgaacaactatttgagacaacttttgtgataa-tttttttctctttctttttattgatcaaaaac 32536921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 14323861 - 14323934
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| || ||||||| |||| |||  | |||||||||| |||| ||||| |||||||||||||    
T  14323861 agtgatatttaaacaaccttttgagataacttttggtacaacttcttttttctcactttttattggtcaaaaac 14323934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 17990392 - 17990319
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| || |||||||||||| |||||| || || |||| |||| ||| ||||| |||||||||    
T  17990392 agtgatatttaaacaaccgtttgagacaacttttgtgacaatttattttttctcacttctcatttgtcaaaaac 17990319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 17625944 - 17625916
Alignment:
Q  286 agtgatatttgaacatccatttgagacaa 314  Q
    |||||||||||||||||||||||||||||    
T  17625944 agtgatatttgaacatccatttgagacaa 17625916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 23991408 - 23991336
Alignment:
Q  288 tgatatttgaacatccatttgaga-caactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||||  | ||||| || ||| ||| || ||| ||||||||||||||||||||||||    
T  23991408 tgatatttgaacaaccatttgctaacaacttttttgagaacctcatttttctctcttttcattggtcaaaaac 23991336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 6e-28; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 16336965 - 16337036
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  16336965 tgatatttgaacatccatttgagacaactcttgtgacaacttctattctctctcttttcattggtcaaaaac 16337036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 34021065 - 34021138
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||||| || | | |||||||||||||||||||||||||||||||||||    
T  34021065 agtgatatttgaacatccatttgagacaacttttttaacaacttcttttctctctcttttcattggtcaaaaac 34021138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 1897864 - 1897791
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| |||||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  1897864 agtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaac 1897791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 30906556 - 30906628
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||||||||||||||||| ||||||||| ||| || |||||||||||||||||| |||||| |||||    
T  30906556 agtgatatttgaacatccatttgaaacaactcttatgacaatttcttttctctctctttttattggttaaaaa 30906628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 2582839 - 2582767
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||| |||||| |||||| |||||| ||| |||||| ||||||||||||||| ||||||||    
T  2582839 gtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattgatcaaaaac 2582767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 24752409 - 24752337
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||||||||| |||||| |||||||| |||  | |||||||||| |||| ||||||||||||||||||    
T  24752409 agtgatatttgaacaaccattttagacaacttttggtacaacttcttttttctcacttttcattggtcaaaaa 24752337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 32457146 - 32457218
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||| |||||| |||||| |||| | |||||||||| |||||| ||||| ||||||||||||||||||    
T  32457146 gtgatatttaaacatctatttgaaacaaattttgtgataacctcttttttctcttttttcattggtcaaaaac 32457218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 17768113 - 17768031
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||||  ||||||| |  ||| ||||||||||  ||||||||  ||||| |||||||    
T  17768113 tttttgagcagtgatatttgaacatccatttttgacaactatgatgacaacttctttttcctctctttctattgggcaaaaac 17768031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 32853032 - 32853110
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| | |||||| |||| | |||||| |||||||||| ||||| ||||||||||| ||||||    
T  32853032 tgagtagtgatatttgaacaactatttgatacaatttttgtgacaacttcttttttctcttttttcattggttaaaaac 32853110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 1196222 - 1196151
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcat 348  Q
    |||||||| |||| ||||||||||  ||  ||||||||||  |||||||||||||||| |||||||||||||    
T  1196222 tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat 1196151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 9954727 - 9954653
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| ||| |||||||| | ||||||||||||||||| ||||||    
T  9954727 agtgatatttgaacaaccatttaatacaacttttggtgacaacttcttctttctctcttttcattggttaaaaac 9954653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 26378278 - 26378348
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaa 356  Q
    ||||||||||||||| |||||| |||||||| |||  | |||||||||| ||||  |||||||||||||||    
T  26378278 agtgatatttgaacaaccattttagacaacttttgatacaacttcttttttctcatttttcattggtcaaa 26378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 29383735 - 29383662
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||  ||  |||||||| |  ||||| |||||||||| ||||||||||||||||||||||||    
T  29383735 agtgttatttgaacaagcaaatgagacaatttatgtgacaacttcttttttctctcttttcattggtcaaaaac 29383662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 359
Target Start/End: Original strand, 10387715 - 10387783
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||  ||| ||||| |||| ||||||||| ||||||| ||| |||||| |||||||||||||    
T  10387715 tatttgaacaatcatatgagataacttttgtgataatttcttttttctatctttttattggtcaaaaac 10387783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 28965734 - 28965806
Alignment:
Q  288 tgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| || |||||||||| | ||||||| | ||||||||||  |||||||||||||| |||||||||||||    
T  28965734 tgatatatgtacatccatttaatgacaactttggtgataactttgtttctctctcttttgattggtcaaaaac 28965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 2241719 - 2241762
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataactt 329  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||    
T  2241719 agtgatatttgaacaaccatttgatacaacttttgtgataactt 2241762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 30733187 - 30733116
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||||||||| |||| ||||||||||||||| |||||| || || |||  ||||| |||| |||||||||||    
T  30733187 agtgatatttaaacaaccatttgagacaacttttgtgacaatttttttgttctctttttttattggtcaaaa 30733116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 11785536 - 11785462
Alignment:
Q  286 agtgatatttgaacatc-catttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | ||||| ||||||||  ||||| ||||| |||| ||||| |||| |||||||||||||    
T  11785536 agtgatatttgaacaactcattttagacaacttatgtgacaacttgttttttctctttttttattggtcaaaaac 11785462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 32253959 - 32253885
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttctttt-ctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||  |||||| |||||| || || |||| |||||||||||||||||| ||||||    
T  32253959 agtgatatttgaacaactatttggtacaacttttgtgacaatttttttttctctctcttttcattggttaaaaac 32253885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 2340576 - 2340503
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| ||||  |||||||||||||| |||| |||| ||  ||| |||||||||| ||||||| |||||    
T  2340576 agtgatatttaaacaatcatttgagacaacttttgtaataattttctttttctctctttttattggtcgaaaac 2340503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 2881516 - 2881439
Alignment:
Q  282 gagcagtgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||| ||||||||| |||||||||| | ||||||| | |||| |||||  |||||||||||| | ||||||||||||    
T  2881516 gagcaatgatatttggacatccatttaatgacaactttggtgacaactttgtttctctctcttcttattggtcaaaaa 2881439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 22491922 - 22491993
Alignment:
Q  286 agtgatatttgaacatc-catttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    ||||||||||||||| | ||||| ||| ||||  ||||| |||||||||| |||||||||| |||||||||||    
T  22491922 agtgatatttgaacaactcattttagaaaacttatgtgacaacttctttt-tctctcttttgattggtcaaaa 22491993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 24772848 - 24772776
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||    
T  24772848 gtgatatttgaacatccatttgagacaactcttgtgacaatttcttttctctctctttttattggtcaaaaac 24772776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 16004215 - 16004291
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||    
T  16004215 tgagtagtgatatttgaacatccatttgagacaactcttgtgacaactt-ttttttctctcttttcattggtcaaaaa 16004291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 55927162 - 55927089
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||    
T  55927162 agtgatatttgaacatccatttgagacaatttttgtgacaatttcttttctctctcttttcattggtcaaaaac 55927089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 352
Target Start/End: Original strand, 28480422 - 28480497
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    |||||||| ||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  28480422 tttttgagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcattggt 28480497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 25523089 - 25523162
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  25523089 agtgttatttgaacaaccatatgagacaacttttgtgataacttattttctctctcttttcattggtcaaaaac 25523162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 36513024 - 36512947
Alignment:
Q  282 gagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| |||||| ||||||    
T  36513024 gagcaatgatatttgaaaatccatttgagacaattcttgtgacaacttcttttctctctctttttattggtaaaaaac 36512947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 28481300 - 28481371
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    |||| ||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  28481300 tgagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcattggt 28481371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 28482175 - 28482246
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggt 352  Q
    |||| ||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  28482175 tgagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcattggt 28482246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 4896393 - 4896466
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| |||||| |||||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  4896393 agtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaac 4896466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 31275324 - 31275251
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||||| |||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  31275324 agtgatatttgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaac 31275251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 51389498 - 51389421
Alignment:
Q  282 gagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||||| |||||||| |||||| |||||| |||||||||| |||||||||||||| || ||||||    
T  51389498 gagcagtgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattagtaaaaaac 51389421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 291 - 359
Target Start/End: Original strand, 38844388 - 38844456
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| |||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  38844388 tatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcattggtcaaaaac 38844456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 42915112 - 42915185
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||| |||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  42915112 agtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaac 42915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 5234359 - 5234437
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| |||||||| |||||| |||||| || || |||| |||||||||| |||||||||||||    
T  5234359 tgagtagtgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttttattggtcaaaaac 5234437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 31658094 - 31658024
Alignment:
Q  289 gatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||| |||||||| ||| || |||||| |||||||||| |||| |||||||||||||||||||    
T  31658094 gatatttgaacaaccatttgatacagcttttgtgacaacttcttttttctcacttttcattggtcaaaaac 31658024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 39241195 - 39241269
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| ||||||||||||||| ||| ||| ||||| |||||||||||||||||||||| ||||||    
T  39241195 agtgatattttaacaaccatttgagacaacttttggtgacaacttattttctctctcttttcattggttaaaaac 39241269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 23690410 - 23690337
Alignment:
Q  285 cagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||||||||||||| |||||| |||| | |||||| ||  |||||| |||||||||||||||||||||||    
T  23690410 cagtgatatttgaacatctatttgaaacaatttttgtgacaatatcttttttctctcttttcattggtcaaaaa 23690337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 29384090 - 29384163
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||| ||| ||||||||||||| ||||||| || ||||| ||||||||||||||||||    
T  29384090 agtgatatttgaacaatcatatgatacaactcttgtgacaacttctattttctcttttttcattggtcaaaaac 29384163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 36792511 - 36792438
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||||||||| |||||| | |||||| ||| ||| |||||||||||||||||||||||||||| |||||    
T  36792511 agtgatatttgaacaaccatttcatacaacttttggtgacaacttcttttctctctcttttcattggttaaaaa 36792438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 39844151 - 39844224
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||||| | ||||||||||| || | | |||||||||| |||||||||| |||||||||||||    
T  39844151 agtgatatttgaacatctaattgagacaacttttttaacaacttcttttttctctctttttattggtcaaaaac 39844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 47998771 - 47998699
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||||||| |||||| |||||||||||| |||| ||| ||||||||||||||||||||    
T  47998771 agtgatatttgaacaatcatttgatacaacttttgtgataactt-ttttttctttcttttcattggtcaaaaac 47998699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 291 - 359
Target Start/End: Original strand, 53583026 - 53583094
Alignment:
Q  291 tatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| |||||||||| |||||| ||||| |||||||||| |||| |||||||||||||    
T  53583026 tatttgaacaaccatatgagacaacttttgtgacaacttattttctctctattttaattggtcaaaaac 53583094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 6953275 - 6953354
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| ||||||   |||||| ||| ||| |||||||||||||||||||||||||||| ||||||    
T  6953275 tgagtagtgatatttgaacaaccatttcttacaacttttggtgacaacttcttttctctctcttttcattggttaaaaac 6953354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 15596580 - 15596501
Alignment:
Q  280 ttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||||||||||| |||||| | |||||| |||||| |||||||||| ||||  |||||||||||| |||||    
T  15596580 ttgagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcatttttcattggtccaaaac 15596501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 51717177 - 51717248
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||||||||||||||  ||| ||||||||||  ||||| || ||||||| ||||||||||||||||||||||    
T  51717177 agtgatatttgaacaatcatatgagacaacttatgtgacaatttcttttttctctcttttcattggtcaaaa 51717248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 31240827 - 31240753
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| ||| |||||||||| ||||||||||||||||| ||||||    
T  31240827 agtgatatttgaacaaccatttcatacaacttttggtgacaacttcttttttctctcttttcattggttaaaaac 31240753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 36444288 - 36444361
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||| ||| |||| |||||||| ||||||| || ||||| ||||||||||||||||||    
T  36444288 agtgatatttgaacaatcatatgatacaattcttgtgacaacttctattttctcttttttcattggtcaaaaac 36444361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 286 - 358
Target Start/End: Original strand, 51296070 - 51296142
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||||||||||| |||||| |||||| |||||| ||  |||||| |||||||||  ||||||||||||    
T  51296070 agtgatatttgaacatctatttgaaacaacttttgtgacaatctcttttttctctctttctattggtcaaaaa 51296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 9162226 - 9162171
Alignment:
Q  304 atttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| |||| | |||||| |||||||||| ||||||||||||||||||||||||    
T  9162226 atttgatacaatttttgtgacaacttcttttttctctcttttcattggtcaaaaac 9162171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 46173713 - 46173642
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||| | |||||||| |||||| |||||| || ||||||| | ||||||||||||||| ||||||    
T  46173713 tgatatttgaataaccatttgatacaacttttgtgacaatttcttttttttctcttttcattggtaaaaaac 46173642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 22257089 - 22257162
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttg-tgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| ||| ||| ||||| |||||||||||||||||||||| ||||||    
T  22257089 agtgatatttgaacaaccatttcatacaacttttggtgacaactt-ttttctctctcttttcattggttaaaaac 22257162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 358
Target Start/End: Complemental strand, 37249085 - 37249015
Alignment:
Q  288 tgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||||||||||| |||||| |||||| ||| |||||| |||||| ||||| |||| |||| |||||||    
T  37249085 tgatatttgaacatctatttgaaacaacttttgagataacctcttttttctctatttttattgctcaaaaa 37249015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Complemental strand, 38952872 - 38952794
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||||||||| ||||   |||||| |||| | ||||||||| ||||||| ||||| ||||||||||||||||||    
T  38952872 tgagtagtgatatttaaacaattatttgatacaatttttgtgataatttcttttttctcttttttcattggtcaaaaac 38952794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 358
Target Start/End: Original strand, 24337240 - 24337321
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||||| |||| |||||||||| |||  ||||| || |  ||||| | |||||||| |||||||||||||||||||||||    
T  24337240 tttttgagtagtgttatttgaacaaccaaatgagataatttatgtgacagcttcttttttctctcttttcattggtcaaaaa 24337321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 36408098 - 36408170
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| | |||||| |||||| |||||| || ||||||| | |||||||||||| || ||||||    
T  36408098 gtgatatttgaacaactatttgatacaacttttgtgacaatttcttttttttctcttttcattagttaaaaac 36408170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 36413221 - 36413293
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| | |||||| |||||| |||||| || ||||||| | |||||||||||| || ||||||    
T  36413221 gtgatatttgaacaactatttgatacaacttttgtgacaatttcttttttttctcttttcattagttaaaaac 36413293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 49195028 - 49194988
Alignment:
Q  319 tgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  49195028 tgtgacaacttcttttctctctctttttattggtcaaaaac 49194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 359
Target Start/End: Original strand, 53091136 - 53091196
Alignment:
Q  299 catccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||| |||||| |||||| |||||||||| |||||  ||| |||||||||||||    
T  53091136 catccatttgatacaacttttgtgacaacttcttttttctcttcttttattggtcaaaaac 53091196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 1033326 - 1033267
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctctttt 345  Q
    ||||||||||||||| |||||| | |||||| |||||| |||||||||| ||||| ||||    
T  1033326 agtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctctttttt 1033267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 1580170 - 1580241
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactctt-gtgataacttcttttctctctcttttcattgg 351  Q
    |||| ||||||||||||||| |||||| | |||||| || |||| ||||| |||| ||||||||||||||||    
T  1580170 tgagtagtgatatttgaacaaccatttcatacaactttttgtgacaactttttttttctctcttttcattgg 1580241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 38160660 - 38160739
Alignment:
Q  281 tgagcagtgatatttgaacatc-catttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| ||||||||||||||| | ||||| ||||||||  ||||| ||||| |||| ||||| |||||||| |||||||||    
T  38160660 tgagtagtgatatttgaacaactcattttagacaacttatgtgacaacttattttttctcttttttcattagtcaaaaac 38160739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 525900 - 525838
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcatt 349  Q
    |||||| |||||||   ||||||||||||| |||||| || || |||||||||||||||||||    
T  525900 gtgataattgaacaattatttgagacaacttttgtgacaattttttttctctctcttttcatt 525838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 3624351 - 3624385
Alignment:
Q  282 gagcagtgatatttgaacatccatttgagacaact 316  Q
    ||||||||||||||||||| |||||||||||||||    
T  3624351 gagcagtgatatttgaacaaccatttgagacaact 3624385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 33438231 - 33438150
Alignment:
Q  278 ttttgagcagtgatatttgaacatccatttgagacaactcttgtgataac-ttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||| |||||||| |||| |||||||  |||||| || ||||||| ||| ||| |||||||||| |||||||||||||    
T  33438231 ttttgagcaatgatatttaaacaaccatttggtacaacttttttgataaccttcattt-tctctctttttattggtcaaaaac 33438150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 34616519 - 34616464
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcatt 349  Q
    |||||||||||||||||||||||||||||        | |||||||||||||||||||||||||    
T  34616519 agtgatatttgaacatccatttgagacaa--------acaacttcttttctctctcttttcatt 34616464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 10994046 - 10994118
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||  ||||| |||||| |  || || ||||||||||||||||||||| |||||| ||||||    
T  10994046 agtgatatttgaacaatcattttagacaatttatgcgacaacttcttttctctctctttt-attggttaaaaac 10994118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 34974599 - 34974558
Alignment:
Q  318 ttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| |||||||||| |||| |||||||||||||||||||    
T  34974599 ttgtgacaacttcttttttctcacttttcattggtcaaaaac 34974558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 35580293 - 35580216
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||| |||| ||||||||||  ||  ||||||||||  ||||| ||||| ||||  ||||||||||||||||||||||    
T  35580293 tgagtagtgttatttgaacaatcaaatgagacaacttatgtgacaacttttttttcctctcttttcattggtcaaaaa 35580216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 40847554 - 40847474
Alignment:
Q  277 tttttgagcagtgatatttgaacatccatttgagacaactcttgtgataa-cttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| ||||||||||||| |||||||| |||||  || ||| || ||||||||   ||||||||||||||| ||||||    
T  40847554 tttttgagcaatgatatttgaacaaccatttgacacaacctttttgacaaccttctttt---tctcttttcattggtaaaaaac 40847474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 2613511 - 2613583
Alignment:
Q  288 tgatatttgaacatccatttgaga-caactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| |||||||| | ||||| |||||| ||  |  |||||||||||||| |||||||||||||    
T  2613511 tgatatttgaacaaccatttgataacaacttttgtgacaatctactttctctctcttttaattggtcaaaaac 2613583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 3286995 - 3286923
Alignment:
Q  287 gtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||| |||||| | |||||| |||||| || || |||| ||||  ||||||||||| ||||||    
T  3286995 gtgatatttgaacaaccatttcacacaacttttgtgacaatttattttttctcctttttcattggttaaaaac 3286923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 316
Target Start/End: Complemental strand, 25476797 - 25476769
Alignment:
Q  288 tgatatttgaacatccatttgagacaact 316  Q
    |||||||||||||||||||||||||||||    
T  25476797 tgatatttgaacatccatttgagacaact 25476769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 358
Target Start/End: Original strand, 40409051 - 40409131
Alignment:
Q  278 ttttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    ||||||| ||||||||||||||| | |||| || ||||| |||  | |||||||||| |||| ||||| |||| |||||||    
T  40409051 ttttgagtagtgatatttgaacaactattttagccaacttttggtacaacttcttttttctcactttttattgatcaaaaa 40409131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 52891792 - 52891820
Alignment:
Q  331 ttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||    
T  52891792 ttttctctctcttttcattggtcaaaaac 52891820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 56364159 - 56364187
Alignment:
Q  286 agtgatatttgaacatccatttgagacaa 314  Q
    |||||||||||||||||||||||||||||    
T  56364159 agtgatatttgaacatccatttgagacaa 56364187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 6602 - 6532
Alignment:
Q  289 gatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  6602 gatatttgaacatccatttgagacaactctcgtgataacttcttttttctctcttttcattgatcaaaaac 6532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 10404 - 10482
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||| |||||||||| |||| |||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  10404 tgagcagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcattggtcaaaaac 10482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 279 - 358
Target Start/End: Complemental strand, 39064 - 38985
Alignment:
Q  279 tttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaa 358  Q
    |||||| ||||||||||||||||| |||||| |||||| |||||| ||  |||||| ||||||||||||||||| |||||    
T  39064 tttgagtagtgatatttgaacatctatttgaaacaacttttgtgacaatctcttttttctctcttttcattggtaaaaaa 38985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 113803 - 113730
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||||| |||||| |||| | |||||| ||| ||| || ||||||||||||||||||||||||    
T  113803 agtgatatttaaacatctatttgaaacaatttttgtgacaacctctcttttctctcttttcattggtcaaaaac 113730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 219590 - 219630
Alignment:
Q  319 tgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  219590 tgtgacaacttcttttctctctcttttcattggtcaaaaac 219630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 359
Target Start/End: Complemental strand, 11352 - 11297
Alignment:
Q  304 atttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||| |||||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  11352 atttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaac 11297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 9736 - 9814
Alignment:
Q  281 tgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||| |||| ||||||||||  ||| |||| ||||| |||||| ||||| |||| | ||||||||||||||||||||||    
T  9736 tgagtagtgttatttgaacaatcatatgaggcaacttttgtgacaacttattttttttctcttttcattggtcaaaaac 9814  T

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Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 357
Target Start/End: Complemental strand, 9636 - 9558
Alignment:
Q  279 tttgagcagtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaa 357  Q
    |||||| ||||||||||||||| | || ||||||| || | |||||||||||  || |||||||||| |||||||||||    
T  9636 tttgagtagtgatatttgaacaactatatgagacagctttggtgataacttccattttctctctttttattggtcaaaa 9558  T

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Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 15082 - 15154
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||  |||||| |||||| |||||||||| ||||| ||||||||||| ||||||    
T  15082 agtgatatttgaacaactatttggtacaacttttgtgacaacttctttt-tctcttttttcattggttaaaaac 15154  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 18181 - 18109
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||||| |||||| || ||| ||||| |||| ||||||||||||||||| ||||||    
T  18181 agtgatatttgaacaactatttgatacaacttttatgacaacttttttt-tctctcttttcattggttaaaaac 18109  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 358
Target Start/End: Complemental strand, 36180 - 36105
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactctt-gtgataacttcttttct--ctctcttttcattggtcaaaaa 358  Q
    ||||||||||||||| |||||||| |||||| || |||| ||||| |||| |  ||||||||||||||||||||||    
T  36180 agtgatatttgaacaaccatttgatacaactttttgtgacaacttgttttttttctctcttttcattggtcaaaaa 36105  T

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Target: scaffold0172 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 17158 - 17080
Alignment:
Q  282 gagcagtgatatttgaacatccatttga-gacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||| ||||||||| |||||||||| | ||||||| | |||| |||||  |||||||||||| | |||||||||||||    
T  17158 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaac 17080  T

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Target: scaffold0060 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 6995 - 6922
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgt-gataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| |||||| | |||||| |||  || ||||| |||||||||||||||||||||| ||||||    
T  6995 agtgatatttgaacaaccattttatacaacttttggcgacaactt-ttttctctctcttttcattggttaaaaac 6922  T

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Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 11429 - 11502
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||||| | |||| |||||||| |||  | || || |||| |||| |||||||||||||||||||    
T  11429 agtgatatttgaacaactattttagacaacttttgatacaatttattttttctcacttttcattggtcaaaaac 11502  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 190778 - 190851
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    ||||||||||||| ||  |||||| |||| | ||||||||| ||||||| ||||  |||| |||||||||||||    
T  190778 agtgatatttgaatatttatttgaaacaatttttgtgataatttcttttttctcattttttattggtcaaaaac 190851  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 120011 - 119938
Alignment:
Q  286 agtgatatttgaacatccatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaaaaac 359  Q
    |||||||||| |||| |||||||| || |||  ||||  || ||||||| ||||||||||||||||| ||||||    
T  120011 agtgatatttaaacaaccatttgatactactactgtggcaatttcttttttctctcttttcattggtaaaaaac 119938  T

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