View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8370_low_27 (Length: 218)
Name: NF8370_low_27
Description: NF8370
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8370_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 48236301 - 48236102
Alignment:
| Q |
1 |
aatgttgtcaaatagtagcagcacgctataacattgttatgcagcggagtttgaacaaattgctattgacaacgtttgtttacctttttccacttcttaa |
100 |
Q |
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| T |
48236301 |
aatgttgtcaaatagtagcagcacgctataacattgttatgcagcggagtttgaacaaattgctattgacaacgtttgtttacctttttccacttcttaa |
48236202 |
T |
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| Q |
101 |
actttgactgccactcatctttttgttatgacaagaatatgtttacacaattatgacaatatactttttcctccttacgtgcacaggttgaggtactaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
48236201 |
actttgactgccactcatctttttgttatgacaagaatatgtttacacaattatgacaatatactttttcctccttacatgcacaggttgaggtactaag |
48236102 |
T |
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