View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8371_low_17 (Length: 247)
Name: NF8371_low_17
Description: NF8371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8371_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 44249045 - 44249276
Alignment:
| Q |
1 |
cacacagattgggaagaacaggagggtttccgtcaggacctggaacaaacagccctgggttgacattcgcgaattttacaccaaagatggcaagcagttg |
100 |
Q |
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| T |
44249045 |
cacacagattgggaagaacaggagggtttccgtcaggacctggaacaaacagccttgggttgacattcgcgaattttacaccaaagatggcaagcagttg |
44249144 |
T |
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| Q |
101 |
cctggcaaaaaaggtatcggattcattttctcatgaatctgtgaacatggttccgtttcgttgtttatgaaatcttttaatggcttatttgcttattgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44249145 |
cctggcaaaaaaggtatcggattcattttctcatgaatctgtgaacatggttccgtttcgttgtttatgaaatcttttaatggcttatttgcttattgat |
44249244 |
T |
|
| Q |
201 |
tgggttttgaaatagaatggtatctttatatc |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
44249245 |
tgggttttgaaatagaatggtatctttatatc |
44249276 |
T |
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