View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8372_low_13 (Length: 203)
Name: NF8372_low_13
Description: NF8372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8372_low_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 47117147 - 47117349
Alignment:
| Q |
1 |
tcgtgcaggttccacaggttctgccatgaacaacatcgggagaacacaaaacaatgccacaaaagccgctgctcaacgactcgcacaagttatgtcgcat |
100 |
Q |
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| T |
47117147 |
tcgtgcaggttccacaggttctgccatgaacaacatcgggagaacacaaaacaatgccacaaaagccgctgctcaacgacttgcacaagttatgtcgcat |
47117246 |
T |
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| Q |
101 |
caaacaattgatgaagaagaagacgatgacgatgttcctcttgactattctgcaattagtggcactagaagcatcggacttggtggtggaagagcagcgc |
200 |
Q |
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| T |
47117247 |
caaacaattgatgaagaagaagacgatgacgatgttcctcttgactattctgcaattagtggcactagaagcatcggacttggtggtggaagagcagcgc |
47117346 |
T |
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| Q |
201 |
ggc |
203 |
Q |
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||| |
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| T |
47117347 |
ggc |
47117349 |
T |
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