View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8373_high_15 (Length: 375)

Name: NF8373_high_15
Description: NF8373
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8373_high_15
NF8373_high_15
[»] chr7 (45 HSPs)
chr7 (170-214)||(36765689-36765733)
chr7 (170-214)||(16933402-16933446)
chr7 (170-214)||(16938785-16938829)
chr7 (170-214)||(29448632-29448676)
chr7 (3-118)||(4406661-4406779)
chr7 (170-215)||(4407956-4408001)
chr7 (170-214)||(4406542-4406586)
chr7 (170-214)||(12908024-12908068)
chr7 (170-214)||(15641230-15641274)
chr7 (170-214)||(40239812-40239856)
chr7 (170-214)||(40789292-40789336)
chr7 (170-214)||(43156304-43156348)
chr7 (170-213)||(4404404-4404447)
chr7 (170-213)||(18956216-18956259)
chr7 (170-213)||(23154746-23154789)
chr7 (178-213)||(36769346-36769381)
chr7 (170-212)||(23639333-23639375)
chr7 (3-118)||(4492468-4492586)
chr7 (178-214)||(4399982-4400018)
chr7 (170-210)||(4492356-4492396)
chr7 (172-212)||(5526219-5526259)
chr7 (170-214)||(10999226-10999270)
chr7 (170-214)||(17278269-17278313)
chr7 (3-54)||(23154561-23154613)
chr7 (170-214)||(32960712-32960756)
chr7 (170-214)||(37669185-37669229)
chr7 (170-214)||(38045770-38045814)
chr7 (3-54)||(40036120-40036172)
chr7 (170-214)||(41343236-41343280)
chr7 (170-214)||(41427076-41427119)
chr7 (179-210)||(1448222-1448253)
chr7 (179-213)||(5483528-5483562)
chr7 (178-212)||(20135005-20135039)
chr7 (170-208)||(27031149-27031187)
chr7 (11-52)||(3672569-3672610)
chr7 (178-210)||(3840137-3840169)
chr7 (86-118)||(4404301-4404333)
chr7 (3-54)||(5483325-5483377)
chr7 (10-46)||(28503071-28503107)
chr7 (170-210)||(38049157-38049197)
chr7 (170-214)||(40035945-40035989)
chr7 (14-68)||(41343406-41343462)
chr7 (170-214)||(42828800-42828844)
chr7 (170-214)||(43111130-43111174)
chr7 (178-214)||(44651794-44651830)
[»] chr5 (58 HSPs)
chr5 (170-214)||(16050690-16050734)
chr5 (170-214)||(31939750-31939794)
chr5 (170-214)||(42111726-42111770)
chr5 (1-118)||(2530003-2530123)
chr5 (170-212)||(7536758-7536800)
chr5 (170-215)||(2530198-2530243)
chr5 (3-118)||(28746352-28746470)
chr5 (170-214)||(2475190-2475234)
chr5 (170-214)||(3297741-3297785)
chr5 (170-214)||(4374770-4374814)
chr5 (170-214)||(8314942-8314986)
chr5 (170-214)||(10042909-10042953)
chr5 (170-214)||(14205525-14205569)
chr5 (170-214)||(16488044-16488088)
chr5 (170-214)||(24027776-24027820)
chr5 (170-214)||(24759094-24759138)
chr5 (170-214)||(29383643-29383687)
chr5 (170-214)||(29874585-29874629)
chr5 (170-210)||(39783071-39783111)
chr5 (170-213)||(25821334-25821377)
chr5 (170-213)||(27176393-27176436)
chr5 (179-214)||(40506719-40506754)
chr5 (172-214)||(32261632-32261674)
chr5 (170-212)||(42110801-42110843)
chr5 (3-118)||(3246749-3246867)
chr5 (170-215)||(3246941-3246986)
chr5 (172-213)||(42322990-42323031)
chr5 (170-214)||(665477-665521)
chr5 (170-214)||(789978-790022)
chr5 (3-54)||(790161-790213)
chr5 (3-54)||(7536564-7536616)
chr5 (170-214)||(28746235-28746279)
chr5 (3-54)||(29382677-29382729)
chr5 (170-214)||(30503674-30503718)
chr5 (170-214)||(30544017-30544061)
chr5 (178-214)||(36088699-36088735)
chr5 (3-54)||(36242247-36242299)
chr5 (170-214)||(43396635-43396679)
chr5 (170-213)||(30503448-30503491)
chr5 (170-213)||(30543791-30543834)
chr5 (178-213)||(42416920-42416955)
chr5 (1-54)||(8314746-8314800)
chr5 (14-75)||(12197738-12197799)
chr5 (169-214)||(15976594-15976639)
chr5 (3-51)||(16488143-16488192)
chr5 (16-65)||(35412965-35413014)
chr5 (177-214)||(36514976-36515013)
chr5 (170-214)||(3213149-3213193)
chr5 (170-214)||(5589383-5589426)
chr5 (18-54)||(12285617-12285653)
chr5 (170-206)||(15875673-15875709)
chr5 (3-54)||(16166390-16166442)
chr5 (3-54)||(19361571-19361623)
chr5 (178-214)||(26379337-26379373)
chr5 (178-214)||(28887299-28887335)
chr5 (14-54)||(31308658-31308698)
chr5 (170-214)||(31958299-31958343)
chr5 (3-54)||(43396439-43396491)
[»] chr4 (55 HSPs)
chr4 (169-215)||(34664933-34664979)
chr4 (170-214)||(17624776-17624820)
chr4 (170-214)||(26111494-26111538)
chr4 (170-214)||(32200634-32200678)
chr4 (170-213)||(23628947-23628990)
chr4 (170-214)||(1166751-1166795)
chr4 (170-214)||(1169233-1169277)
chr4 (170-214)||(7365909-7365953)
chr4 (170-214)||(7400124-7400168)
chr4 (170-214)||(8151314-8151358)
chr4 (1-118)||(11180826-11180947)
chr4 (170-214)||(11200947-11200991)
chr4 (170-214)||(13890910-13890954)
chr4 (170-214)||(17976559-17976603)
chr4 (170-214)||(27288390-27288434)
chr4 (170-214)||(28116750-28116794)
chr4 (170-214)||(36189975-36190019)
chr4 (170-214)||(45019182-45019226)
chr4 (170-214)||(53274742-53274786)
chr4 (1-118)||(17976366-17976486)
chr4 (171-214)||(32139529-32139572)
chr4 (3-115)||(20681116-20681231)
chr4 (172-214)||(28361410-28361452)
chr4 (1-54)||(39651654-39651708)
chr4 (1-54)||(43117434-43117488)
chr4 (3-118)||(49125466-49125584)
chr4 (3-118)||(52620559-52620677)
chr4 (3-54)||(346710-346762)
chr4 (170-214)||(8848052-8848096)
chr4 (170-214)||(32206510-32206554)
chr4 (170-214)||(34663967-34664011)
chr4 (170-214)||(39651844-39651888)
chr4 (178-214)||(46045717-46045753)
chr4 (170-214)||(52620734-52620778)
chr4 (170-214)||(55208401-55208445)
chr4 (170-214)||(55991934-55991978)
chr4 (4-54)||(10581994-10582045)
chr4 (170-213)||(18138452-18138495)
chr4 (3-68)||(29099709-29099776)
chr4 (170-213)||(49125663-49125706)
chr4 (1-54)||(26097752-26097806)
chr4 (3-52)||(34664763-34664813)
chr4 (170-215)||(37873559-37873605)
chr4 (170-210)||(346525-346565)
chr4 (170-214)||(10581902-10581946)
chr4 (3-54)||(18138257-18138309)
chr4 (178-214)||(24303720-24303756)
chr4 (3-54)||(28361594-28361646)
chr4 (14-54)||(31760252-31760292)
chr4 (14-54)||(37193255-37193295)
chr4 (177-213)||(40665639-40665675)
chr4 (170-214)||(40951058-40951102)
chr4 (11-51)||(44918231-44918271)
chr4 (3-54)||(46045896-46045948)
chr4 (170-214)||(55188283-55188327)
[»] chr8 (52 HSPs)
chr8 (1-68)||(35916642-35916711)
chr8 (170-214)||(16845141-16845185)
chr8 (170-214)||(40048592-40048636)
chr8 (3-118)||(38139233-38139351)
chr8 (170-214)||(7219492-7219536)
chr8 (170-214)||(16239084-16239128)
chr8 (170-214)||(17045925-17045969)
chr8 (170-214)||(17313457-17313501)
chr8 (170-214)||(27467827-27467871)
chr8 (170-214)||(34805904-34805948)
chr8 (170-214)||(38139426-38139470)
chr8 (3-54)||(39525373-39525425)
chr8 (170-214)||(39685536-39685580)
chr8 (170-214)||(41361103-41361147)
chr8 (170-214)||(43817880-43817924)
chr8 (170-214)||(44908604-44908648)
chr8 (170-213)||(39140716-39140759)
chr8 (171-214)||(44602855-44602898)
chr8 (1-54)||(11579111-11579165)
chr8 (169-214)||(169621-169666)
chr8 (169-210)||(36059197-36059238)
chr8 (169-214)||(36216493-36216538)
chr8 (3-54)||(6657333-6657385)
chr8 (3-54)||(6737735-6737787)
chr8 (3-54)||(14449704-14449756)
chr8 (170-214)||(14718980-14719024)
chr8 (170-210)||(24511639-24511679)
chr8 (18-54)||(29293187-29293223)
chr8 (3-54)||(35004191-35004243)
chr8 (170-214)||(38137635-38137679)
chr8 (1-52)||(38909205-38909257)
chr8 (170-214)||(39485943-39485987)
chr8 (178-214)||(39525573-39525609)
chr8 (170-214)||(41526422-41526466)
chr8 (178-214)||(42844420-42844456)
chr8 (170-210)||(45138971-45139011)
chr8 (169-212)||(6816146-6816189)
chr8 (179-214)||(11579314-11579349)
chr8 (179-214)||(11924890-11924925)
chr8 (170-213)||(12261387-12261430)
chr8 (170-212)||(35004370-35004412)
chr8 (177-214)||(41903045-41903082)
chr8 (3-73)||(42983917-42983990)
chr8 (14-54)||(11771713-11771753)
chr8 (3-54)||(12261575-12261627)
chr8 (178-214)||(14449525-14449561)
chr8 (18-54)||(17062354-17062390)
chr8 (18-54)||(17585968-17586004)
chr8 (3-54)||(33848790-33848842)
chr8 (3-54)||(38137819-38137871)
chr8 (178-214)||(39998097-39998133)
chr8 (170-214)||(44655179-44655223)
[»] chr1 (48 HSPs)
chr1 (3-118)||(39879174-39879292)
chr1 (170-214)||(33818011-33818055)
chr1 (170-214)||(33877479-33877523)
chr1 (169-213)||(36952630-36952674)
chr1 (170-212)||(33933030-33933072)
chr1 (3-118)||(43119148-43119266)
chr1 (1-52)||(1322627-1322679)
chr1 (170-214)||(3265231-3265275)
chr1 (170-214)||(7833660-7833704)
chr1 (170-214)||(9574976-9575020)
chr1 (170-214)||(25659725-25659769)
chr1 (170-214)||(33642725-33642769)
chr1 (170-214)||(33895132-33895176)
chr1 (169-213)||(34652387-34652431)
chr1 (170-214)||(38802420-38802464)
chr1 (170-214)||(40432114-40432158)
chr1 (170-214)||(41901615-41901659)
chr1 (170-214)||(43120694-43120738)
chr1 (170-213)||(16097459-16097502)
chr1 (170-213)||(17366271-17366314)
chr1 (170-212)||(11754146-11754188)
chr1 (1-54)||(17366448-17366502)
chr1 (170-212)||(31215782-31215824)
chr1 (170-212)||(31221537-31221579)
chr1 (178-212)||(46040405-46040439)
chr1 (1-54)||(49571125-49571179)
chr1 (169-214)||(39729121-39729166)
chr1 (170-214)||(17585630-17585674)
chr1 (170-214)||(33373736-33373780)
chr1 (170-214)||(33831846-33831890)
chr1 (170-214)||(33894009-33894053)
chr1 (178-214)||(36165435-36165471)
chr1 (170-214)||(39326960-39327004)
chr1 (170-214)||(46588008-46588052)
chr1 (178-214)||(47037046-47037082)
chr1 (178-213)||(44819821-44819856)
chr1 (170-212)||(45104295-45104337)
chr1 (3-68)||(34078204-34078272)
chr1 (169-210)||(43123152-43123193)
chr1 (170-214)||(11583270-11583313)
chr1 (170-210)||(14487244-14487284)
chr1 (170-214)||(16033009-16033053)
chr1 (178-210)||(17249158-17249190)
chr1 (178-214)||(18091400-18091436)
chr1 (170-214)||(23730211-23730254)
chr1 (11-51)||(28006745-28006785)
chr1 (170-214)||(31638332-31638376)
chr1 (170-214)||(36680040-36680084)
[»] chr6 (25 HSPs)
chr6 (1-68)||(17505406-17505474)
chr6 (170-214)||(34247672-34247716)
chr6 (3-118)||(6018608-6018726)
chr6 (170-214)||(7541218-7541262)
chr6 (170-214)||(17505600-17505644)
chr6 (170-214)||(18593526-18593570)
chr6 (170-214)||(28472336-28472380)
chr6 (170-214)||(29859525-29859569)
chr6 (170-214)||(559841-559885)
chr6 (170-210)||(5414482-5414522)
chr6 (170-214)||(6018490-6018534)
chr6 (3-54)||(7541028-7541080)
chr6 (170-214)||(29977739-29977783)
chr6 (170-214)||(32244490-32244534)
chr6 (178-214)||(34206928-34206964)
chr6 (170-213)||(10943067-10943110)
chr6 (170-213)||(10945821-10945864)
chr6 (179-214)||(24046479-24046514)
chr6 (172-214)||(19989005-19989047)
chr6 (1-54)||(29043124-29043178)
chr6 (170-214)||(172968-173012)
chr6 (170-210)||(3850339-3850379)
chr6 (14-54)||(7081669-7081709)
chr6 (170-214)||(20791660-20791704)
chr6 (1-52)||(34247858-34247910)
[»] chr3 (59 HSPs)
chr3 (170-214)||(19536821-19536865)
chr3 (170-214)||(44541232-44541276)
chr3 (170-213)||(46850630-46850673)
chr3 (170-212)||(29450775-29450817)
chr3 (1-116)||(35906720-35906838)
chr3 (170-215)||(54203666-54203711)
chr3 (3-118)||(54203780-54203898)
chr3 (170-214)||(875881-875925)
chr3 (170-214)||(4019032-4019076)
chr3 (170-214)||(7040996-7041040)
chr3 (170-214)||(7265170-7265214)
chr3 (170-214)||(14587302-14587346)
chr3 (170-214)||(15496386-15496430)
chr3 (170-214)||(22346995-22347039)
chr3 (170-214)||(26881735-26881779)
chr3 (170-214)||(29500448-29500492)
chr3 (170-214)||(30268999-30269043)
chr3 (174-214)||(41990681-41990721)
chr3 (170-214)||(45599182-45599226)
chr3 (170-214)||(48961231-48961275)
chr3 (170-214)||(52461143-52461187)
chr3 (170-214)||(52674897-52674941)
chr3 (170-214)||(53022781-53022825)
chr3 (170-214)||(54510303-54510347)
chr3 (170-214)||(54741921-54741965)
chr3 (170-213)||(47719598-47719641)
chr3 (170-212)||(47670453-47670495)
chr3 (169-214)||(35529774-35529819)
chr3 (173-214)||(35690123-35690164)
chr3 (3-118)||(39721182-39721300)
chr3 (173-213)||(2909552-2909592)
chr3 (178-214)||(12101378-12101414)
chr3 (3-54)||(13337023-13337075)
chr3 (170-214)||(33899941-33899985)
chr3 (170-214)||(34433456-34433500)
chr3 (170-214)||(36592132-36592176)
chr3 (170-214)||(36987655-36987699)
chr3 (170-214)||(37013094-37013138)
chr3 (170-210)||(37413684-37413724)
chr3 (170-214)||(39721373-39721417)
chr3 (170-214)||(48545225-48545269)
chr3 (170-214)||(50739268-50739312)
chr3 (170-214)||(50773543-50773587)
chr3 (170-214)||(54113532-54113576)
chr3 (11-54)||(7824810-7824853)
chr3 (11-54)||(8174273-8174316)
chr3 (179-214)||(38361874-38361909)
chr3 (3-52)||(36987841-36987891)
chr3 (3-52)||(37013280-37013330)
chr3 (1-54)||(46090218-46090272)
chr3 (169-214)||(20849318-20849363)
chr3 (3-54)||(15496567-15496619)
chr3 (14-54)||(21549044-21549084)
chr3 (14-54)||(29687088-29687128)
chr3 (170-214)||(33932403-33932447)
chr3 (178-210)||(46757683-46757715)
chr3 (3-54)||(47670584-47670636)
chr3 (14-54)||(49600279-49600319)
chr3 (170-214)||(54795955-54795999)
[»] chr2 (41 HSPs)
chr2 (170-214)||(668207-668251)
chr2 (169-214)||(3324179-3324224)
chr2 (169-214)||(18166750-18166795)
chr2 (169-214)||(35423893-35423938)
chr2 (170-214)||(971069-971113)
chr2 (170-214)||(1835799-1835843)
chr2 (170-214)||(3079831-3079875)
chr2 (170-214)||(3243210-3243254)
chr2 (170-214)||(7274786-7274830)
chr2 (170-214)||(8683774-8683818)
chr2 (170-214)||(8878235-8878279)
chr2 (170-214)||(17032729-17032773)
chr2 (170-214)||(17051065-17051109)
chr2 (170-214)||(34912765-34912809)
chr2 (170-214)||(36085862-36085906)
chr2 (170-214)||(40202329-40202373)
chr2 (170-212)||(4631327-4631369)
chr2 (1-54)||(35423707-35423761)
chr2 (3-118)||(34912574-34912692)
chr2 (169-210)||(36078481-36078522)
chr2 (170-214)||(5166382-5166426)
chr2 (14-54)||(15427698-15427738)
chr2 (170-214)||(20313163-20313207)
chr2 (170-210)||(31972397-31972437)
chr2 (3-54)||(37522618-37522670)
chr2 (170-210)||(38959564-38959604)
chr2 (3-54)||(45474644-45474696)
chr2 (3-46)||(10120533-10120576)
chr2 (170-212)||(1118094-1118136)
chr2 (13-55)||(9686462-9686504)
chr2 (1-54)||(38709626-38709680)
chr2 (173-211)||(38879253-38879291)
chr2 (1-68)||(3079637-3079706)
chr2 (172-213)||(9799239-9799280)
chr2 (170-214)||(10120725-10120769)
chr2 (11-51)||(13490728-13490768)
chr2 (170-214)||(13549491-13549535)
chr2 (14-54)||(23756718-23756758)
chr2 (170-210)||(24926005-24926045)
chr2 (3-35)||(41452755-41452787)
chr2 (170-214)||(41452929-41452973)
[»] scaffold0020 (1 HSPs)
scaffold0020 (170-215)||(132773-132818)
[»] scaffold0481 (2 HSPs)
scaffold0481 (170-214)||(7565-7609)
scaffold0481 (170-212)||(4431-4473)
[»] scaffold0178 (1 HSPs)
scaffold0178 (170-214)||(7205-7249)
[»] scaffold0166 (1 HSPs)
scaffold0166 (170-214)||(1588-1632)
[»] scaffold0024 (3 HSPs)
scaffold0024 (170-210)||(110447-110487)
scaffold0024 (169-214)||(90375-90420)
scaffold0024 (3-54)||(110625-110677)
[»] scaffold0244 (1 HSPs)
scaffold0244 (177-212)||(7493-7528)
[»] scaffold0318 (1 HSPs)
scaffold0318 (177-214)||(1173-1210)
[»] scaffold0198 (1 HSPs)
scaffold0198 (169-214)||(15175-15220)
[»] scaffold1793 (1 HSPs)
scaffold1793 (170-214)||(183-227)
[»] scaffold0197 (1 HSPs)
scaffold0197 (170-214)||(25824-25868)
[»] scaffold0027 (2 HSPs)
scaffold0027 (3-54)||(138129-138181)
scaffold0027 (170-214)||(137945-137989)
[»] scaffold0016 (1 HSPs)
scaffold0016 (170-214)||(99492-99536)
[»] scaffold0003 (1 HSPs)
scaffold0003 (170-214)||(229196-229240)
[»] scaffold1822 (1 HSPs)
scaffold1822 (170-214)||(357-401)
[»] scaffold0077 (1 HSPs)
scaffold0077 (14-54)||(8693-8733)


Alignment Details
Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 36765689 - 36765733
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  36765689 ttaaagaactttattttaactttgttttaaaatagcttttagacc 36765733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16933446 - 16933402
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  16933446 ttaaagagctttattttaactttgttttaaaatagcttttagacc 16933402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16938829 - 16938785
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  16938829 ttaaagagctttattttaactttgttttaaaatagcttttagacc 16938785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 29448676 - 29448632
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  29448676 ttaaagaactttattttaactttgttttaaagtagcttttagacc 29448632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 4406779 - 4406661
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||||||||||||||| |||||||||||  || |||||||||||||| ||  |||||||  ||||||| ||||       |||||||||||| |    
T  4406779 tattctctagtttagctcagttgatatagacaatgcataaatatatgcaaggtcgcgagttcgaaccccggacaccaccaaaaaaataataaattcaaag 4406680  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  4406679 ttttgtacaatattttgcc 4406661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 4408001 - 4407956
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagaccc 215  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  4408001 ttaaagagctttattttaactttgttttaaagtagcttttagaccc 4407956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 4406586 - 4406542
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  4406586 ttaaagagctttattttaactttgttttaaagtagcttttagacc 4406542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 12908024 - 12908068
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  12908024 ttaaagagctttattttaactttgttttaaagtagcttttagacc 12908068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 15641230 - 15641274
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  15641230 ttaaagaactttattgtaactttgtattaaaatagcttttagacc 15641274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 40239856 - 40239812
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  40239856 ttaaagagctttattttaactttgttttaaagtagcttttagacc 40239812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 40789292 - 40789336
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| | |||||||||||    
T  40789292 ttaaagaactttattttaactttgttttaaagttgcttttagacc 40789336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 43156304 - 43156348
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  43156304 ttaaagagctttattttaactttgttttaaagtagcttttagacc 43156348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 4404404 - 4404447
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  4404404 ttaaataactttattttaactttgttttaaagtagcttttagac 4404447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 18956259 - 18956216
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  18956259 ttaaagagctttattttaactttgttttaaagtagcttttagac 18956216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 23154746 - 23154789
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  23154746 ttaaataactttattttaactttgttttaaagtagcttttagac 23154789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 36769346 - 36769381
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||||||||||||||||||||||||||||||||    
T  36769346 ctttattttaactttgttttaaaatagcttttagac 36769381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 23639375 - 23639333
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  23639375 ttaaagaactttattttaactttgttttaaagtagctcttaga 23639333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 4492586 - 4492468
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaatccggacaacacc-nnnnnnntaataaattcaatg 99  Q
    |||||||||| ||||||||||| |||| |||||| ||| |||||||||||||| || |||||||  ||||||| ||||        |||||||||||| |    
T  4492586 tattctctagattagctcagttgatatcgacaatgtataaatatatgcaaggtcgctggttcgatcccggacaccaccaaaaaaaataataaattcaaag 4492487  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  4492486 ttttgtacaatattttgcc 4492468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 4400018 - 4399982
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  4400018 ctttattttaactttgttttaaagtagcttttagacc 4399982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 4492396 - 4492356
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  4492396 ttaaagagctttattttaactttgttttaaagtagctttta 4492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 5526219 - 5526259
Alignment:
Q  172 aaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  5526219 aaagaattttattttaactttgttttaaagtagcttttaga 5526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 10999226 - 10999270
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| |||||||||||||    
T  10999226 ttaaagagttttattttaactttgttttaaagtagcttttagacc 10999270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 17278269 - 17278313
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||    
T  17278269 ttaaagagctttatttcaactttgttttaaagtagcttttagacc 17278313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 23154561 - 23154613
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  23154561 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 23154613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 32960756 - 32960712
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| |||||||||||||    
T  32960756 ttaaagagttttattttaactttgttttaaagtagcttttagacc 32960712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 37669229 - 37669185
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  37669229 ttaaagagctttattttaactttgttttaaagtagtttttagacc 37669185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 38045770 - 38045814
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  38045770 ttaaagagctttattttaactttgttttaaagtagtttttagacc 38045814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 40036172 - 40036120
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  40036172 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 40036120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 41343280 - 41343236
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  41343280 ttaaagagctttattttaactttgttttaaagtagtttttagacc 41343236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 41427076 - 41427119
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||| |||||||||||||||||||||| |||||||||||||    
T  41427076 ttaaagaa-tttattttaactttgttttaaagtagcttttagacc 41427119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 210
Target Start/End: Original strand, 1448222 - 1448253
Alignment:
Q  179 tttattttaactttgttttaaaatagctttta 210  Q
    ||||||||||||||||||||||||||||||||    
T  1448222 tttattttaactttgttttaaaatagctttta 1448253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 5483528 - 5483562
Alignment:
Q  179 tttattttaactttgttttaaaatagcttttagac 213  Q
    |||||||||||||||||||||| ||||||||||||    
T  5483528 tttattttaactttgttttaaagtagcttttagac 5483562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 20135039 - 20135005
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||||||||||||||||||| |||||||||||    
T  20135039 ctttattttaactttgttttaaagtagcttttaga 20135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 27031187 - 27031149
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttt 208  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  27031187 ttaaagagctttattttaactttgttttaaagtagcttt 27031149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 3672610 - 3672569
Alignment:
Q  11 agtttagctcagttaatatagacaatatataatatatgcaag 52  Q
    |||||||||||||| |||| ||||||| ||||||||||||||    
T  3672610 agtttagctcagttgatatggacaatacataatatatgcaag 3672569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 3840137 - 3840169
Alignment:
Q  178 ctttattttaactttgttttaaaatagctttta 210  Q
    ||||||||||||||||||||||| |||||||||    
T  3840137 ctttattttaactttgttttaaagtagctttta 3840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 4404301 - 4404333
Alignment:
Q  86 taataaattcaatgttctgtacaatattttgcc 118  Q
    |||||||||||||||| ||||||||||||||||    
T  4404301 taataaattcaatgttttgtacaatattttgcc 4404333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 5483325 - 5483377
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||| ||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  5483325 tattctttagtttagctcagttgatataaacaatgtataaatatatgcaaggt 5483377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 28503071 - 28503107
Alignment:
Q  10 tagtttagctcagttaatatagacaatatataatata 46  Q
    |||||||||||||||| || |||||||||||||||||    
T  28503071 tagtttagctcagttattaaagacaatatataatata 28503107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 38049197 - 38049157
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||||||| ||| |||||    
T  38049197 ttaaagagctttattttaactttgttttaaattaggtttta 38049157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 40035989 - 40035945
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||| ||||||| |||||||||||||    
T  40035989 ttaaagagttttattttaactttattttaaagtagcttttagacc 40035945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 41343462 - 41343406
Alignment:
Q  14 ttagctcagttaatatagacaatatat-aatatatgcaagg-tgccggttcgaatcc 68  Q
    ||||||||||| ||||||||||| ||| ||||||||||||| ||| |||||||||||    
T  41343462 ttagctcagttgatatagacaatgtataaatatatgcaaggttgcgggttcgaatcc 41343406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 42828844 - 42828800
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||| || || ||||||||||    
T  42828844 ttaaagacctttattttaactttgttttgaagtaacttttagacc 42828800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 43111130 - 43111174
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||| |||||||| || |||||||||||||    
T  43111130 ttaaagagctttattttaattttgttttgaagtagcttttagacc 43111174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 44651830 - 44651794
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| || ||||||||||    
T  44651830 ctttattttaactttgttttaaagtaacttttagacc 44651794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16050734 - 16050690
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16050734 ttaaagaactttattttaactttgttttaaaatagcttttagacc 16050690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 31939794 - 31939750
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  31939794 ttaaagaactttattttaactttgttttaaagtagcttttagacc 31939750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 42111770 - 42111726
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  42111770 ttaaagaactttattttaactttgttttaaagtagcttttagacc 42111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 2530003 - 2530123
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaa 97  Q
    |||||||||||| ||||||||||| |||||||||||  || |||||||||||||| || ||||||||  ||||||| ||||       ||||||||||||    
T  2530003 attattctctagattagctcagttgatatagacaatgcataaatatatgcaaggtcgcaggttcgaaccccggacaccaccaaaaaaataataaattcaa 2530102  T
Q  98 tgttctgtacaatattttgcc 118  Q
     ||| ||||||||||||||||    
T  2530103 agttttgtacaatattttgcc 2530123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 7536758 - 7536800
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  7536758 ttaaagaactttattttaactttgttttaaagtagcttttaga 7536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 2530198 - 2530243
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagaccc 215  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2530198 ttaaagagctttattttaactttgttttaaagtagcttttagaccc 2530243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 28746470 - 28746352
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||| ||||||||||||||||||||||| ||| |||||||||||||| || ||||||||  ||||||| |||        |||||||||||| |    
T  28746470 tattctctagcttagctcagttaatatagacaatgtataaatatatgcaaggtcgcgggttcgaaccccggacaccacaaaaaaaataataaattcaaag 28746371  T
Q  100 ttctgtacaatattttgcc 118  Q
    || | ||||||||||||||    
T  28746370 ttttatacaatattttgcc 28746352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 2475234 - 2475190
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||    
T  2475234 ttaaagaactttattttaactttgttttaaagtagtttttagacc 2475190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 3297785 - 3297741
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  3297785 ttaaagagctttattttaactttgttttaaagtagcttttagacc 3297741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 4374814 - 4374770
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  4374814 ttaaagagctttattttaactttgttttaaagtagcttttagacc 4374770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 8314942 - 8314986
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  8314942 ttaaagagctttattttaactttgttttaaagtagcttttagacc 8314986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 10042909 - 10042953
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  10042909 ttaaagagctttattttaactttgttttaaagtagcttttagacc 10042953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 14205525 - 14205569
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  14205525 ttaaagagctttattttaactttgttttaaagtagcttttagacc 14205569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16488088 - 16488044
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||    
T  16488088 ttaaagaactttattttaactttattttaaagtagcttttagacc 16488044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 24027820 - 24027776
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  24027820 ttaaagagctttattttaactttgttttaaagtagcttttagacc 24027776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 24759094 - 24759138
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  24759094 ttaaagagctttattttaactttgttttaaagtagcttttagacc 24759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 29383687 - 29383643
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  29383687 ttaaagacctttattttaactttgttttaaagtagcttttagacc 29383643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 29874629 - 29874585
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||    
T  29874629 ttaaagaactttatttttactttgttttaaagtagcttttagacc 29874585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 39783071 - 39783111
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  39783071 ttaaagaactttattttaactttgttttaaagtagctttta 39783111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 25821334 - 25821377
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  25821334 ttaaagagctttattttaactttgttttaaagtagcttttagac 25821377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 27176436 - 27176393
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  27176436 ttaaagagctttattttaactttgttttaaaataccttttagac 27176393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 40506754 - 40506719
Alignment:
Q  179 tttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||||||||    
T  40506754 tttattttaactttgttttaaaatagcttttagacc 40506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 32261674 - 32261632
Alignment:
Q  172 aaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  32261674 aaagagctttattttaactttgttttaaagtagcttttagacc 32261632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 42110801 - 42110843
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  42110801 ttaaagaactttattttaactttattttaaagtagcttttaga 42110843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 3246749 - 3246867
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaatc-cggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||| |||||||||||| || ||||||||||| ||| |||||||||||||| || ||||| || | |||||| ||||       ||||||||| ||||    
T  3246749 tattctttagtttagctcaattgatatagacaatgtataaatatatgcaaggtcgcgggttcaaacctcggacaccaccaaaaaaataataaatttaatg 3246848  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  3246849 ttttgtacaatattttgcc 3246867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 3246941 - 3246986
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagaccc 215  Q
    |||||||  |||||||||||||||||||||| ||||||||||||||    
T  3246941 ttaaagagttttattttaactttgttttaaagtagcttttagaccc 3246986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 42322990 - 42323031
Alignment:
Q  172 aaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  42322990 aaagagctttattttaactttgttttaaagtagcttttagac 42323031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 665521 - 665477
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  665521 ttaaagagctttattttaaatttgttttaaagtagcttttagacc 665477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 790022 - 789978
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  790022 ttaaagagctttattttaactttgttttaaagtaccttttagacc 789978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 790213 - 790161
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  790213 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 790161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 7536564 - 7536616
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    ||||||||||||||||| |||| ||||||||||| ||| ||||||||||||||    
T  7536564 tattctctagtttagcttagttgatatagacaatgtataaatatatgcaaggt 7536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 28746279 - 28746235
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  28746279 ttaaagagctttattttaactttgttttaaagtaacttttagacc 28746235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 29382729 - 29382677
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  29382729 tattatctagtttagctcagttgatatagacaatgtataaatatatgcaaggt 29382677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 30503718 - 30503674
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||    
T  30503718 ttaaagagctttattttaactttgttttaaagttgcttttagacc 30503674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 30544061 - 30544017
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| | |||||||||||    
T  30544061 ttaaagagctttattttaactttgttttaaagttgcttttagacc 30544017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 36088699 - 36088735
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  36088699 ctttattttaactttgttttaaagtagcttttagacc 36088735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 36242247 - 36242299
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  36242247 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 36242299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 43396635 - 43396679
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  43396635 ttaaagagctttattttaactttgttttaaagtagtttttagacc 43396679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 30503491 - 30503448
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    |||||||  |||||||||||||||||||||| ||||||||||||    
T  30503491 ttaaagagttttattttaactttgttttaaagtagcttttagac 30503448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 30543834 - 30543791
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    |||||||  |||||||||||||||||||||| ||||||||||||    
T  30543834 ttaaagagttttattttaactttgttttaaagtagcttttagac 30543791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 42416920 - 42416955
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||||||||||||||||||| ||||||||||||    
T  42416920 ctttattttaactttgttttaaagtagcttttagac 42416955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8314746 - 8314800
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| ||||| ||||| ||| ||||||||||||||    
T  8314746 attattctctagcttagctcagttgatataaacaatgtataaatatatgcaaggt 8314800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 12197738 - 12197799
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggtgccggttcgaatccggacaac 75  Q
    ||||||||||| |||||||||| || ||||||||||||| |   ||||||||||| ||||||    
T  12197738 ttagctcagttgatatagacaaaatctaatatatgcaagatcagggttcgaatcccgacaac 12197799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 15976594 - 15976639
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||| ||||||||||||||||||||||| |  ||||||||||    
T  15976594 tttaaagagctttattttaactttgttttaaagtgacttttagacc 15976639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 16488192 - 16488143
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaa 51  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||||||    
T  16488192 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaa 16488143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 35412965 - 35413014
Alignment:
Q  16 agctcagttaatatagacaatatataatatatgcaaggtgccggttcgaa 65  Q
    |||||||||||||| ||||||  |||||||||||||||| | ||||||||    
T  35412965 agctcagttaatatggacaatgcataatatatgcaaggtccgggttcgaa 35413014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 36515013 - 36514976
Alignment:
Q  177 actttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  36515013 actttattttaactttgttttaaaggagcttttagacc 36514976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 3213193 - 3213149
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||| || || ||||||||||    
T  3213193 ttaaagacctttattttaactttgttttgaagtaacttttagacc 3213149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 5589426 - 5589383
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||    
T  5589426 ttaaagagctttattt-aactttgttttaaagtagcttttagacc 5589383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 12285653 - 12285617
Alignment:
Q  18 ctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  12285653 ctcagttgataaagacaatatataatatatgcaaggt 12285617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 15875709 - 15875673
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagct 206  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  15875709 ttaaagacctttattttaactttgttttaaagtagct 15875673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 16166442 - 16166390
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| |||||||||||  || ||||||||||||||    
T  16166442 tattctctagcttagctcagttgatatagacaatgcataaatatatgcaaggt 16166390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 19361571 - 19361623
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||| |||||    
T  19361571 tattctctagcttagctcagttgatatagacaatgtataaatatatgtaaggt 19361623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 26379337 - 26379373
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  26379337 ctttattttaactttgttttaaagtagcttgtagacc 26379373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 28887299 - 28887335
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| || ||||||||||    
T  28887299 ctttattttaactttgttttaaagtaacttttagacc 28887335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 31308698 - 31308658
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    |||||||||||  || |||||||||||||||||||||||||    
T  31308698 ttagctcagttggtaaagacaatatataatatatgcaaggt 31308658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 31958343 - 31958299
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| ||| |||||||||    
T  31958343 ttaaagagttttattttaactttgttttaaagtagtttttagacc 31958299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 43396439 - 43396491
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| |||||| |||| ||||||||||| ||| ||||||||||||||    
T  43396439 tattctctagcttagcttagttgatatagacaatgtataaatatatgcaaggt 43396491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 34664933 - 34664979
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagaccc 215  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34664933 tttaaagaactttattttaactttgttttaaagtagcttttagaccc 34664979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 17624776 - 17624820
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  17624776 ttaaagaactttattttaactttgttttaaagtagcttttagacc 17624820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 26111494 - 26111538
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  26111494 ttaaagaactttattttaactttgttttaaagtagcttttagacc 26111538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 32200678 - 32200634
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  32200678 ttaaagagctttattttaactttgttttaaaatagcttttagacc 32200634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 23628947 - 23628990
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  23628947 ttaaagaactttattttaactttgttttaaagtagcttttagac 23628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 1166751 - 1166795
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  1166751 ttaaagagctttattttaactttgttttaaagtagcttttagacc 1166795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 1169233 - 1169277
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  1169233 ttaaagagctttattttaactttgttttaaagtagcttttagacc 1169277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7365909 - 7365953
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7365909 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7365953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 7400168 - 7400124
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7400168 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 8151314 - 8151358
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  8151314 ttaaagagctttattttaactttgttttaaagtagcttttagacc 8151358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11180826 - 11180947
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacacc-nnnnnnntaataaattca 96  Q
    |||||||||||| ||||||||||| ||||||||||| ||| |||||||||||||| || ||||||||  |||||||  |||        |||||||||||    
T  11180826 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaaccccggacactaccaaaaaaaataataaattca 11180925  T
Q  97 atgttctgtacaatattttgcc 118  Q
    ||||| ||||||||||||||||    
T  11180926 atgttttgtacaatattttgcc 11180947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 11200947 - 11200991
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  11200947 ttaaagagctttattttaactttgttttaaagtagcttttagacc 11200991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 13890954 - 13890910
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  13890954 ttaaagagctttattttaactttgttttaaagtagcttttagacc 13890910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 17976559 - 17976603
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  17976559 ttaaagagctttattttaactttgttttaaagtagcttttagacc 17976603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 27288434 - 27288390
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  27288434 ttaaagagctttattttaactttgttttaaagtagcttttagacc 27288390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 28116794 - 28116750
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  28116794 ttaaagagctttattttaactttgttttaaagtagcttttagacc 28116750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 36190019 - 36189975
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  36190019 ttaaagagctttattttaactttgttttaaagtagcttttagacc 36189975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 45019226 - 45019182
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  45019226 ttaaagagctttattttaactttgttttaaagtagcttttagacc 45019182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 53274742 - 53274786
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  53274742 ttaaagagctttattttaactttgttttaaagtagcttttagacc 53274786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17976366 - 17976486
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaat-ccggacaacaccnnnnnnntaataaattcaa 97  Q
    |||||||||||  ||| ||||||| ||||||||||| ||| |||||||||||||| || ||||||||| ||||||| ||||       ||||||||||||    
T  17976366 attattctctaacttaactcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaatcccggacaccaccaaaaaaataataaattcaa 17976465  T
Q  98 tgttctgtacaatattttgcc 118  Q
     ||| ||| ||||||||||||    
T  17976466 agttttgtgcaatattttgcc 17976486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 32139529 - 32139572
Alignment:
Q  171 taaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  32139529 taaaaaactttattttaactttgttttaaagtagcttttagacc 32139572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 20681116 - 20681231
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||||||||| || ||||| ||  ||||||| ||||       ||||||||||||||    
T  20681116 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggtcgcaggttcaaaccccggacaccaccaaaaaaataataaattcaatg 20681215  T
Q  100 ttctgtacaatatttt 115  Q
    ||  ||||||||||||    
T  20681216 tttcgtacaatatttt 20681231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 28361452 - 28361410
Alignment:
Q  172 aaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  28361452 aaagagctttattttaactttgttttaaagtagcttttagacc 28361410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39651654 - 39651708
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  39651654 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 39651708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43117434 - 43117488
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  43117434 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 43117488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 49125466 - 49125584
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||||||||||||||| |||||| ||||  || |||||||||||||| || ||||||||  ||||||| ||||       |||||||||||| |    
T  49125466 tattctctagtttagctcagttgatatagtcaatgcataaatatatgcaaggtcgcgggttcgaaccccggacaccaccaaaaaaataataaattcaaag 49125565  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||| ||||    
T  49125566 ttttgtacaatattatgcc 49125584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 52620559 - 52620677
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||| ||||| ||||||||||| |||||||||||  || |||||||||||||| || |||||||| |||||||| ||||       |||||||||||  |    
T  52620559 tattatctagcttagctcagttgatatagacaatgcataaatatatgcaaggtcgcgggttcgaactccggacaccaccaaaaaaataataaattcagag 52620658  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  52620659 ttttgtacaatattttgcc 52620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 346762 - 346710
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| |||||||||| |||| ||||||||||||||    
T  346762 tattctctagcttagctcagttgatatagacaacatataaatatatgcaaggt 346710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 8848052 - 8848096
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||    
T  8848052 ttaaagagctttattttaactttgttttaaagtagcttgtagacc 8848096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 32206554 - 32206510
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  32206554 ttaaagagctttattttaactttattttaaagtagcttttagacc 32206510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 34663967 - 34664011
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  34663967 ttaaagagctttattttaactttattttaaagtagcttttagacc 34664011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 39651844 - 39651888
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  39651844 ttaaagagctttattttaactttgttttaaagtagtttttagacc 39651888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 46045753 - 46045717
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  46045753 ctttattttaactttgttttaaagtagcttttagacc 46045717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 52620734 - 52620778
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  52620734 ttaaagagctttattttaactttgttttaaagtaacttttagacc 52620778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 55208445 - 55208401
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  55208445 ttaaagagctttattttaactttgttttaaagtaacttttagacc 55208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 55991934 - 55991978
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  55991934 ttaaagagctttattttaactttgttttaaagtagtttttagacc 55991978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 10582045 - 10581994
Alignment:
Q  4 attctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    ||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  10582045 attctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 10581994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 18138452 - 18138495
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  18138452 ttaaagagctttattttaactttattttaaagtagcttttagac 18138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 29099776 - 29099709
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaatcc 68  Q
    |||||||||| ||||||||||| |||||||||||  || |||||||||||||| || |||||||||||    
T  29099776 tattctctagcttagctcagttgatatagacaatgcataaatatatgcaaggtcgcgggttcgaatcc 29099709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 49125663 - 49125706
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||||    
T  49125663 ttaaagagctttattttaactttattttaaagtagcttttagac 49125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26097806 - 26097752
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| ||||| ||||| ||| ||||||||||||||    
T  26097806 attattctctagcttagctcagttgatatatacaatgtataaatatatgcaaggt 26097752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 34664763 - 34664813
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaag 52  Q
    ||||||||||||||||| |||| ||||||||||| ||| ||||||||||||    
T  34664763 tattctctagtttagctaagttgatatagacaatgtataaatatatgcaag 34664813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 37873605 - 37873559
Alignment:
Q  170 ttaaagaactttatttt-aactttgttttaaaatagcttttagaccc 215  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  37873605 ttaaagagctttatttttaactttgttttaaagtagcttttagaccc 37873559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 346565 - 346525
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||| ||||||||||||| |||||||||    
T  346565 ttaaagagctttatttttactttgttttaaagtagctttta 346525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 10581946 - 10581902
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||| ||||||||||| ||| |||||||||    
T  10581946 ttaaagagctttattttaattttgttttaaagtagtttttagacc 10581902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18138257 - 18138309
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||||||||||||| |||||| ||||  || ||||||||||||||    
T  18138257 tattctctagtttagctcagttgatatagtcaatgcataaatatatgcaaggt 18138309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 24303756 - 24303720
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  24303756 ctttattttaactttattttaaagtagcttttagacc 24303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 28361646 - 28361594
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||| ||||| ||||||||||| ||| ||||||||||||||    
T  28361646 tattctctagcttagcccagttgatatagacaatgtataaatatatgcaaggt 28361594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 31760252 - 31760292
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    |||||||||||  |||||||||| |||||||||||||||||    
T  31760252 ttagctcagttggtatagacaatgtataatatatgcaaggt 31760292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 37193255 - 37193295
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    |||||||||||| ||| |||||| |||||||||||||||||    
T  37193255 ttagctcagttagtatggacaatgtataatatatgcaaggt 37193295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 40665639 - 40665675
Alignment:
Q  177 actttattttaactttgttttaaaatagcttttagac 213  Q
    |||||||||||||||||||||||||||  ||||||||    
T  40665639 actttattttaactttgttttaaaataatttttagac 40665675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 40951058 - 40951102
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||| ||||||| |||||||||||||    
T  40951058 ttaaagagttttattttaactttattttaaagtagcttttagacc 40951102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 44918271 - 44918231
Alignment:
Q  11 agtttagctcagttaatatagacaatatataatatatgcaa 51  Q
    |||||| ||||||| ||| ||||||||||||||||||||||    
T  44918271 agtttaactcagttgatagagacaatatataatatatgcaa 44918231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 46045948 - 46045896
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||| ||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  46045948 tattatctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 46045896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 55188283 - 55188327
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||||||  |||||||||    
T  55188283 ttaaagagctttattttaactttattttaaaataatttttagacc 55188327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35916711 - 35916642
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaatcc 68  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||    
T  35916711 attattctctagcttagctcagttgatatagacaatatataaatatatgcaaggtcgcgggttcgaatcc 35916642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 16845141 - 16845185
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  16845141 ttaaagaactttattttaactttgttttaaagtagcttttagacc 16845185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 40048636 - 40048592
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  40048636 ttaaagaactttattttaactttattttaaaatagcttttagacc 40048592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 38139233 - 38139351
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||||||||| |  ||||||||  ||||||| ||||       |||||||||||| |    
T  38139233 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggtcgtgggttcgaaccccggacaccaccaaaaaaataataaattcaaag 38139332  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  38139333 ttttgtacaatattttgcc 38139351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7219492 - 7219536
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7219492 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7219536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16239128 - 16239084
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  16239128 ttaaagagctttattttaactttgttttaaagtagcttttagacc 16239084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 17045969 - 17045925
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  17045969 ttaaagagctttattttaactttgttttaaagtagcttttagacc 17045925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 17313501 - 17313457
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  17313501 ttaaagagctttattttaactttgttttaaagtagcttttagacc 17313457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 27467827 - 27467871
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  27467827 ttaaagagctttattttaactttgttttaaagtagcttttagacc 27467871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 34805904 - 34805948
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  34805904 ttaaagagctttattttaactttgttttaaagtagcttttagacc 34805948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 38139426 - 38139470
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  38139426 ttaaagagctttattttaactttgttttaaagtagcttttagacc 38139470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 39525373 - 39525425
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  39525373 tattctctagtttagctcagttgatatagacaatgtataaatatatgcaaggt 39525425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 39685536 - 39685580
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||    
T  39685536 ttaaagagctttattttaactttattttaaaatagcttttagacc 39685580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 41361103 - 41361147
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  41361103 ttaaagagctttattttaactttgttttaaagtagcttttagacc 41361147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 43817924 - 43817880
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  43817924 ttaaagagctttattttaactttgttttaaagtagcttttagacc 43817880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 44908604 - 44908648
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  44908604 ttaaagagctttattttaactttgttttaaagtagcttttagacc 44908648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 39140759 - 39140716
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  39140759 ttaaagaactttattttaactttgttttaaagtaacttttagac 39140716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 44602898 - 44602855
Alignment:
Q  171 taaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||| ||||||||||||||||||||||||||| |||||||||    
T  44602898 taaagagctttattttaactttgttttaaaatagtttttagacc 44602855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11579111 - 11579165
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  11579111 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 11579165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 169666 - 169621
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||    
T  169666 tttaaaggactttattttaactttattttaaagtagcttttagacc 169621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 36059238 - 36059197
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  36059238 tttaaagaactttatttgaactttgttttaaagtagctttta 36059197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 36216538 - 36216493
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||    
T  36216538 tttaaagaactttattttaatttttttttaaagtagcttttagacc 36216493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 6657333 - 6657385
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||    
T  6657333 tattctctagcttaactcagttgatatagacaatatataaatatatgcaaggt 6657385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 6737735 - 6737787
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||    
T  6737735 tattctctagcttaactcagttgatatagacaatatataaatatatgcaaggt 6737787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 14449756 - 14449704
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  14449756 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 14449704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 14718980 - 14719024
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  14718980 ttaaagagctttattttaactttattttaaagtagcttttagacc 14719024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 24511639 - 24511679
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  24511639 ttaaagatctttattttaactttgttttaaagtagctttta 24511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 29293187 - 29293223
Alignment:
Q  18 ctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29293187 ctcagttaatatagacaatatataatatatgtaaggt 29293223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 35004191 - 35004243
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  35004191 tattctgtagtttagctcagttgatatagacaatgtataaatatatgcaaggt 35004243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 38137679 - 38137635
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| |||||||||||||    
T  38137679 ttaaagagttttattttaactttgttttaaagtagcttttagacc 38137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38909205 - 38909257
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaag 52  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||    
T  38909205 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaag 38909257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 39485987 - 39485943
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||    
T  39485987 ttaaagagctttattttaactttgttttaaagtagcctttagacc 39485943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 39525573 - 39525609
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  39525573 ctttattttaactttgttttaaagtagcttttagacc 39525609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 41526422 - 41526466
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||    
T  41526422 ttaaagagctttattttaactttgttttaaagtagcttctagacc 41526466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 42844420 - 42844456
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  42844420 ctttattttaactttgttttaaagtagcttttagacc 42844456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 45139011 - 45138971
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  45139011 ttaaagagctttattttaactttgttttaaagtagctttta 45138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 6816146 - 6816189
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    |||||||  ||||||||||||||||||||||| |||||||||||    
T  6816146 tttaaagggctttattttaactttgttttaaagtagcttttaga 6816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 11579314 - 11579349
Alignment:
Q  179 tttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||| |||||||||||||    
T  11579314 tttattttaactttgttttaaagtagcttttagacc 11579349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 11924890 - 11924925
Alignment:
Q  179 tttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||| |||||||||||||    
T  11924890 tttattttaactttgttttaaagtagcttttagacc 11924925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 12261430 - 12261387
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||    
T  12261430 ttaaagaactttattttaactttattttaaagtagtttttagac 12261387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 35004370 - 35004412
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||    
T  35004370 ttaaataactttattttaactttgttttaaagtagtttttaga 35004412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 41903082 - 41903045
Alignment:
Q  177 actttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  41903082 actttattttatctttgttttaaaagagcttttagacc 41903045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 42983917 - 42983990
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggaca 73  Q
    |||| ||||| ||||||||||| ||||||||||| ||| |||||||||||||| || |||||||| ||||||||    
T  42983917 tattatctagcttagctcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaactccggaca 42983990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 11771713 - 11771753
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||| ||| |||||||| ||||||||||||||||    
T  11771713 ttagctcagttgatagagacaatacataatatatgcaaggt 11771753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 12261627 - 12261575
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||  ||||||||||| ||||||||||| ||| ||||||||||||||    
T  12261627 tattctctaacttagctcagttgatatagacaatgtataaatatatgcaaggt 12261575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 14449561 - 14449525
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| || ||||||||||    
T  14449561 ctttattttaactttgttttaaagtaacttttagacc 14449525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 17062390 - 17062354
Alignment:
Q  18 ctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  17062390 ctcagttgatatagacaatacataatatatgcaaggt 17062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 17585968 - 17586004
Alignment:
Q  18 ctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  17585968 ctcagttgatatagacaatacataatatatgcaaggt 17586004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 33848842 - 33848790
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||| ||||||    
T  33848842 tattctctagcttagctcagttgatatagacaatgtataaatatatacaaggt 33848790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 38137871 - 38137819
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||| | ||||||||||| ||||||||||| ||| ||||||||||||||    
T  38137871 tattctctggcttagctcagttgatatagacaatgtataaatatatgcaaggt 38137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 39998097 - 39998133
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| || ||||||||||    
T  39998097 ctttattttaactttgttttaaagtatcttttagacc 39998133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 44655179 - 44655223
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||| |||||||||||| ||||||| |||||    
T  44655179 ttaaagagctttattttatctttgttttaaagtagctttaagacc 44655223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 39879292 - 39879174
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||||| || ||||||||  || |||| ||||       ||||||||||||||    
T  39879292 tattctctagtttagctcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaaccccagacaccaccaaaaaaataataaattcaatg 39879193  T
Q  100 ttctgtacaatattttgcc 118  Q
    || |||| |||||||||||    
T  39879192 ttttgtaaaatattttgcc 39879174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 33818055 - 33818011
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  33818055 ttaaagagctttattttaactttgttttaaaatagcttttagacc 33818011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 33877523 - 33877479
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  33877523 ttaaagagctttattttaactttgttttaaaatagcttttagacc 33877479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 36952674 - 36952630
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  36952674 tttaaagaactttattttaactttgttttaaagtagcttttagac 36952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 33933030 - 33933072
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  33933030 ttaaagaactttattttaactttgttttaaagtagcttttaga 33933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 43119266 - 43119148
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaagg-tgccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||| ||||||||||||||||| ||||||||||| ||| ||||||||||||| ||| ||||||||  ||||||| |||        |||||||||||| |    
T  43119266 tattatctagtttagctcagttgatatagacaatgtataaatatatgcaaggttgcaggttcgaaccccggacaccacaaaaaaaataataaattcaaag 43119167  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  43119166 ttttgtacaatattttgcc 43119148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1322679 - 1322627
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaag 52  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  1322679 attattctctagtttagctcagttgatatagacaatgtataaatatatgcaag 1322627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 3265231 - 3265275
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  3265231 ttaaagaactttattttaactttgttttagagtagcttttagacc 3265275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7833660 - 7833704
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7833660 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7833704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 9574976 - 9575020
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  9574976 ttaaagagctttattttaactttgttttaaagtagcttttagacc 9575020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 25659769 - 25659725
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  25659769 ttaaagagctttattttaactttgttttaaagtagcttttagacc 25659725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 33642725 - 33642769
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  33642725 ttaaagagctttattttaactttgttttaaagtagcttttagacc 33642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 33895176 - 33895132
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  33895176 ttaaagagctttattttaactttgttttaaagtagcttttagacc 33895132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 34652387 - 34652431
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||    
T  34652387 tttaaagaactttattttaactttgttttaaagtagtttttagac 34652431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 38802420 - 38802464
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  38802420 ttaaagagctttattttaactttgttttaaagtagcttttagacc 38802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 40432158 - 40432114
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  40432158 ttaaagagctttattttaactttgttttaaagtagcttttagacc 40432114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 41901659 - 41901615
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  41901659 ttaaagagctttattttaactttgttttaaagtagcttttagacc 41901615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 43120738 - 43120694
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  43120738 ttaaagagctttattttaactttgttttaaagtagcttttagacc 43120694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 16097459 - 16097502
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  16097459 ttaaaggactttattttaactttgttttaaagtagcttttagac 16097502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 17366314 - 17366271
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  17366314 ttaaagagctttattttaactttgttttaaagtagcttttagac 17366271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 11754188 - 11754146
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  11754188 ttaaagagctttattttaactttgttttaaagtagcttttaga 11754146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17366502 - 17366448
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  17366502 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 17366448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 31215824 - 31215782
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  31215824 ttaaagagctttattttaactttgttttaaagtagcttttaga 31215782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 31221579 - 31221537
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  31221579 ttaaagagctttattttaactttgttttaaagtagcttttaga 31221537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 46040439 - 46040405
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttaga 212  Q
    |||||||||||||||||||||||||||||||||||    
T  46040439 ctttattttaactttgttttaaaatagcttttaga 46040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 49571125 - 49571179
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  49571125 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 49571179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 39729166 - 39729121
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||    
T  39729166 tttaaagagctttattttaattttgttttaaagtagcttttagacc 39729121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 17585630 - 17585674
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| |||||||||||||    
T  17585630 ttaaagagttttattttaactttgttttaaagtagcttttagacc 17585674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 33373780 - 33373736
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  33373780 ttaaagagctttattttaactttgttttaaagtagtttttagacc 33373736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 33831890 - 33831846
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  33831890 ttaaagagctttattttaactttgttttaaagtagattttagacc 33831846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 33894053 - 33894009
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  33894053 ttaaagagctttattttaactttgttttaaagtagattttagacc 33894009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 36165471 - 36165435
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36165471 ctttattttaactttattttaaaatagcttttagacc 36165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 39327004 - 39326960
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  39327004 ttaaagagctttattttaactttattttaaagtagcttttagacc 39326960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 46588052 - 46588008
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||    
T  46588052 ttaaagagctttattttaactttgttttagagtagcttttagacc 46588008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 47037082 - 47037046
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  47037082 ctttattttaactttgttttaaagtagcttttagacc 47037046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 44819856 - 44819821
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||||||||||||||||||| ||||||||||||    
T  44819856 ctttattttaactttgttttaaagtagcttttagac 44819821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 45104295 - 45104337
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||    
T  45104295 ttaaagagctttattttaactttgtttaaaagtagcttttaga 45104337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 34078204 - 34078272
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaa--tatataatatatgcaaggt-gccggttcgaatcc 68  Q
    |||||||||| ||||||||||| |||| |||||  |||| |||||||||||||| || |||||||||||    
T  34078204 tattctctagcttagctcagttgatatggacaatgtataaaatatatgcaaggtcgcgggttcgaatcc 34078272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 43123152 - 43123193
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    |||||||  ||||||||||||||||||||||| |||||||||    
T  43123152 tttaaagggctttattttaactttgttttaaagtagctttta 43123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 11583270 - 11583313
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  11583270 ttaaagagctttattttaa-tttgttttaaagtagcttttagacc 11583313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 14487284 - 14487244
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||| ||||||| |||||||||    
T  14487284 ttaaagagctttattttaactttattttaaagtagctttta 14487244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 16033053 - 16033009
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||| || || ||||||||||    
T  16033053 ttaaagacctttattttaactttgttttgaagtaacttttagacc 16033009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 17249158 - 17249190
Alignment:
Q  178 ctttattttaactttgttttaaaatagctttta 210  Q
    ||||||||||||||||||||||| |||||||||    
T  17249158 ctttattttaactttgttttaaagtagctttta 17249190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 18091400 - 18091436
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||| || |||||||||||||    
T  18091400 ctttattttaactttgttttgaactagcttttagacc 18091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 23730254 - 23730211
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||    
T  23730254 ttaaagagctttattttaactttg-tttaaagtagcttttagacc 23730211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 28006745 - 28006785
Alignment:
Q  11 agtttagctcagttaatatagacaatatataatatatgcaa 51  Q
    |||||| |||||||||||||||||||  |||||||||||||    
T  28006745 agtttaactcagttaatatagacaatgcataatatatgcaa 28006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 31638376 - 31638332
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||| |||||||||||| ||||||| |||||    
T  31638376 ttaaagagctttattttatctttgttttaaagtagctttaagacc 31638332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 36680040 - 36680084
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||| || || ||||||||||    
T  36680040 ttaaagacctttattttaactttgttttgaattaacttttagacc 36680084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17505406 - 17505474
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggtgccggttcgaatcc 68  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||  ||||||||||||    
T  17505406 attattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggtcgcggttcgaatcc 17505474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 34247716 - 34247672
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  34247716 ttaaagaactttattttaactttgttttaaagtagcttttagacc 34247672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 6018726 - 6018608
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |  ||||||||  ||||||| ||||       ||||||||| || |    
T  6018726 tattctctagtttagctcagttgatatagacaatgtataaatatatgcaaggtcgtgggttcgaaccccggacaccaccaaaaaaataataaatttaaag 6018627  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  6018626 ttttgtacaatattttgcc 6018608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7541218 - 7541262
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7541218 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7541262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 17505600 - 17505644
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  17505600 ttaaagagctttattttaactttgttttaaagtagcttttagacc 17505644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 18593570 - 18593526
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  18593570 ttaaagagctttattttaactttgttttaaagtagcttttagacc 18593526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 28472336 - 28472380
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  28472336 ttaaagagctttattttaactttgttttaaagtagcttttagacc 28472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 29859525 - 29859569
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  29859525 ttaaagagctttattttaactttgttttaaagtagcttttagacc 29859569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 559841 - 559885
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  559841 ttaaagagctttattttaactttgttttaaagtaacttttagacc 559885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 5414522 - 5414482
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  5414522 ttaaagagttttattttaactttgttttaaaatagctttta 5414482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 6018534 - 6018490
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  6018534 ttaaagagctttattttaactttgttttaaagtaacttttagacc 6018490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 7541028 - 7541080
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  7541028 tattctctagattagctcagttgatatagacaatgtataaatatatgcaaggt 7541080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 29977739 - 29977783
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||    
T  29977739 ttaaagagctttatttaaactttgttttaaaatagtttttagacc 29977783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 32244490 - 32244534
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  32244490 ttaaagagctttattttaactttattttaaagtagcttttagacc 32244534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 34206964 - 34206928
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  34206964 ctttattttaactttgttttaaagtagcttttagacc 34206928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 10943110 - 10943067
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||    
T  10943110 ttaaagagctttattttaactttgttttaaagtagattttagac 10943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 10945821 - 10945864
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||    
T  10945821 ttaaagaactttattttaactttgttttaaagtaaattttagac 10945864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 24046514 - 24046479
Alignment:
Q  179 tttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||| |||||||||||||    
T  24046514 tttattttaactttgttttaaagtagcttttagacc 24046479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 19989005 - 19989047
Alignment:
Q  172 aaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||    
T  19989005 aaagagctttattttaactttgttttaaagtagattttagacc 19989047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29043124 - 29043178
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| |||||||| || ||||||||||| ||| ||||||||||||||    
T  29043124 attattctctagcttagctcaattgatatagacaatttataaatatatgcaaggt 29043178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 173012 - 172968
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| ||| |||||||||    
T  173012 ttaaagagttttattttaactttgttttaaagtagtttttagacc 172968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 3850339 - 3850379
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||| ||| |||||||||    
T  3850339 ttaaagagctttattttaactttgtttgaaagtagctttta 3850379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 7081709 - 7081669
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||| ||| |||||||| ||||||||||||||||    
T  7081709 ttagctcagttgataaagacaatacataatatatgcaaggt 7081669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 20791660 - 20791704
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||||    
T  20791660 ttaaagagctttattttaactttgttttaaagtattttttagacc 20791704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34247910 - 34247858
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaag 52  Q
    |||||||||||| |||| |||||| ||||||||||| ||| ||||||||||||    
T  34247910 attattctctagcttagttcagttgatatagacaatgtataaatatatgcaag 34247858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 19536821 - 19536865
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  19536821 ttaaagaactttattttaactttgttttaaattagcttttagacc 19536865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 44541232 - 44541276
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  44541232 ttaaagaactttattttaactttgttttaaaagagcttttagacc 44541276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 46850673 - 46850630
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  46850673 ttaaagacctttattttaactttgttttaaaatagcttttagac 46850630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 29450775 - 29450817
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  29450775 ttaaagaactttattttaactttgttttaaagtagcttttaga 29450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 35906838 - 35906720
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaatc-cggacaacaccnnnnnnntaataaattcaa 97  Q
    |||||||||||| |||||||| || ||||||||||||||| |||||||||||||| || |||||||| | |||||| ||||       |||| |||||||    
T  35906838 attattctctagcttagctcaattgatatagacaatatataaatatatgcaaggtcgcgggttcgaacctcggacaccaccaaaaaaataatcaattcaa 35906739  T
Q  98 tgttctgtacaatattttg 116  Q
     ||| ||||||||||||||    
T  35906738 agttttgtacaatattttg 35906720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 54203711 - 54203666
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagaccc 215  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  54203711 ttaaagagctttattttaactttgttttaaagtagcttttagaccc 54203666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 54203898 - 54203780
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaatc-cggacaacaccnnnnnnntaataaattcaatg 99  Q
    ||||||||| |||||||||||| ||||||||||| ||| |||||||||||||| || ||||| || | |||||| ||||       ||||||||| ||||    
T  54203898 tattctctaatttagctcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcaaacctcggacaccaccaaaaaaataataaatttaatg 54203799  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  54203798 ttttgtacaatattttgcc 54203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 875881 - 875925
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  875881 ttaaagagctttattttaactttgttttaaagtagcttttagacc 875925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 4019032 - 4019076
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  4019032 ttaaagagctttattttaactttgttttaaagtagcttttagacc 4019076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7040996 - 7041040
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7040996 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7041040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7265170 - 7265214
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7265170 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7265214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 14587346 - 14587302
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  14587346 ttaaagagctttattttaactttgttttaaagtagcttttagacc 14587302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 15496430 - 15496386
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  15496430 ttaaagagctttattttaactttgttttaaagtagcttttagacc 15496386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 22347039 - 22346995
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  22347039 ttaaagagctttattttaactttgttttaaagtagcttttagacc 22346995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 26881735 - 26881779
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  26881735 ttaaagagctttattttaactttgttttaaagtagcttttagacc 26881779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 29500448 - 29500492
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  29500448 ttaaagagctttattttaactttgttttaaagtagcttttagacc 29500492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 30269043 - 30268999
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  30269043 ttaaagagctttattttaactttgttttaaagtagcttttagacc 30268999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 41990721 - 41990681
Alignment:
Q  174 agaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  41990721 agaactttattttaactttgttttaaagtagcttttagacc 41990681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 45599226 - 45599182
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  45599226 ttaaagagctttattttaactttgttttaaagtagcttttagacc 45599182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 48961231 - 48961275
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  48961231 ttaaagagctttattttaactttgttttaaagtagcttttagacc 48961275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 52461143 - 52461187
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  52461143 ttaaagagctttattttaactttgttttaaagtagcttttagacc 52461187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 52674897 - 52674941
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  52674897 ttaaagagctttattttaactttgttttaaagtagcttttagacc 52674941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 53022781 - 53022825
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  53022781 ttaaagagctttattttaactttgttttaaagtagcttttagacc 53022825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 54510347 - 54510303
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  54510347 ttaaagagctttattttaactttgttttaaagtagcttttagacc 54510303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 54741921 - 54741965
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  54741921 ttaaagagctttattttaactttgttttaaagtagcttttagacc 54741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 47719598 - 47719641
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  47719598 ttaaagagctttattttaactttgttttaaagtagcttttagac 47719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 47670495 - 47670453
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  47670495 ttaaaaaattttattttaactttgttttaaaatagcttttaga 47670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 35529819 - 35529774
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||    
T  35529819 tttaaagggctttattttaactttgttttaaagtagcttttagacc 35529774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 35690164 - 35690123
Alignment:
Q  173 aagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  35690164 aagaactttattttaactttgttttaaagtaacttttagacc 35690123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 39721182 - 39721300
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||| ||||| |  ||||||||  ||||||| ||||       |||||||||||| |    
T  39721182 tattctctagcttagctcagttgatatagacaatgtataaatatatgtaaggtcgtgggttcgaaccccggacaccaccaaaaaaataataaattcaaag 39721281  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  39721282 ttttgtacaatattttgcc 39721300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 2909552 - 2909592
Alignment:
Q  173 aagaactttattttaactttgttttaaaatagcttttagac 213  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  2909552 aagagctttattttaactttgttttaaagtagcttttagac 2909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 12101414 - 12101378
Alignment:
Q  178 ctttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||| |||||||||||||    
T  12101414 ctttattttaactttgttttaaagtagcttttagacc 12101378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13337023 - 13337075
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  13337023 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 13337075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 33899941 - 33899985
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||    
T  33899941 ttaaaaaactttattttaactttgttttaaagtaacttttagacc 33899985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 34433500 - 34433456
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||    
T  34433500 ttaaaggactttatttaaactttgttttaaagtagcttttagacc 34433456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 36592176 - 36592132
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| |||||||||||||    
T  36592176 ttaaagagttttattttaactttgttttaaagtagcttttagacc 36592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 36987699 - 36987655
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  36987699 ttaaagagctttattttaactttgttttaaagtagtttttagacc 36987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 37013138 - 37013094
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  37013138 ttaaagagctttattttaactttgttttaaagtagtttttagacc 37013094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 37413684 - 37413724
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  37413684 ttaaaggactttattttaactttgttttaaagtagctttta 37413724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 39721373 - 39721417
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  39721373 ttaaagagctttattttaactttgttttaaagtagtttttagacc 39721417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 48545225 - 48545269
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||| ||||||||||| |||||||||||||    
T  48545225 ttaaagagctttattttaattttgttttaaagtagcttttagacc 48545269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 50739268 - 50739312
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  50739268 ttaaagagctttattttaactttattttaaagtagcttttagacc 50739312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 50773587 - 50773543
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||||    
T  50773587 ttaaagagctttattttaactttattttaaagtagcttttagacc 50773543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 54113532 - 54113576
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||    
T  54113532 ttaaaggactttattttaactttgttttaaagtagtttttagacc 54113576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 7824810 - 7824853
Alignment:
Q  11 agtttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||    
T  7824810 agtttaactcagttgatatagacaatacataatatatgcaaggt 7824853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 8174273 - 8174316
Alignment:
Q  11 agtttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||||||  || |||||||||||||||||||||||||    
T  8174273 agtttagctcagttggtagagacaatatataatatatgcaaggt 8174316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 38361874 - 38361909
Alignment:
Q  179 tttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||| |||||||||||||    
T  38361874 tttattttaactttgttttaaagtagcttttagacc 38361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 36987891 - 36987841
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaag 52  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||    
T  36987891 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaag 36987841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 37013330 - 37013280
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaag 52  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||    
T  37013330 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaag 37013280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 46090272 - 46090218
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||||||||||| |||||||||||  || ||||||||||||||    
T  46090272 attattctctagcttagctcagttgatatagacaatgcataaatatatgcaaggt 46090218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 20849363 - 20849318
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||| ||||||| || ||||||||||    
T  20849363 tttaaaggactttattttaacttttttttaaagtaacttttagacc 20849318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 15496619 - 15496567
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||| |||||||||    
T  15496619 tattctctagcttagctcagttgatatagacaatgtataaatacatgcaaggt 15496567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 21549044 - 21549084
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||| |||| |||||| |||||||||||||||||    
T  21549044 ttagctcagttgatatggacaatgtataatatatgcaaggt 21549084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 29687088 - 29687128
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||| |||| ||||||||||| ||||||||||||    
T  29687088 ttagctcagttgatatggacaatatatattatatgcaaggt 29687128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 33932447 - 33932403
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||| | ||| |||||||||    
T  33932447 ttaaagagctttattttaactttgttttagagtagtttttagacc 33932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 46757683 - 46757715
Alignment:
Q  178 ctttattttaactttgttttaaaatagctttta 210  Q
    ||||||||||||||||||||||| |||||||||    
T  46757683 ctttattttaactttgttttaaagtagctttta 46757715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 47670636 - 47670584
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||| |||||    
T  47670636 tattctctagcttagctcagttgatatagacaatgtataaatatatgaaaggt 47670584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 49600319 - 49600279
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    |||||||||||| || |||||||| ||||||||||||||||    
T  49600319 ttagctcagttagtagagacaataaataatatatgcaaggt 49600279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 54795999 - 54795955
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||| || || ||||||||||    
T  54795999 ttaaagacctttattttaactttgttttgaagtaacttttagacc 54795955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 668251 - 668207
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  668251 ttaaagaactttattttaactttgttttaaagtagcttttagacc 668207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 3324224 - 3324179
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||    
T  3324224 tttaaagagctttattttaactttgttttaaagtagcttttagacc 3324179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 18166795 - 18166750
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||||||||||||||||||||||||||| || ||||||||||    
T  18166795 tttaaagaactttattttaactttgttttaaagtaacttttagacc 18166750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 35423893 - 35423938
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||    
T  35423893 tttaaagagctttattttaactttgttttaaagtagcttttagacc 35423938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 971069 - 971113
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  971069 ttaaagagctttattttaactttgttttaaagtagcttttagacc 971113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 1835799 - 1835843
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  1835799 ttaaagagctttattttaactttgttttaaagtagcttttagacc 1835843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 3079831 - 3079875
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  3079831 ttaaagagctttattttaactttgttttaaagtagcttttagacc 3079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 3243254 - 3243210
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  3243254 ttaaagagctttattttaactttgttttaaagtagcttttagacc 3243210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7274786 - 7274830
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7274786 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7274830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 8683774 - 8683818
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  8683774 ttaaagagctttattttaactttgttttaaagtagcttttagacc 8683818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 8878235 - 8878279
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  8878235 ttaaagagctttattttaactttgttttaaagtagcttttagacc 8878279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 17032773 - 17032729
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  17032773 ttaaagagctttattttaactttgttttaaagtagcttttagacc 17032729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 17051109 - 17051065
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  17051109 ttaaagagctttattttaactttgttttaaagtagcttttagacc 17051065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 34912765 - 34912809
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  34912765 ttaaagagctttattttaactttgttttaaagtagcttttagacc 34912809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 36085906 - 36085862
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  36085906 ttaaagatctttattttaactttgttttaaagtagcttttagacc 36085862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 40202329 - 40202373
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  40202329 ttaaagagctttattttaactttgttttaaagtagcttttagacc 40202373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 4631327 - 4631369
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  4631327 ttaaagagctttattttaactttgttttaaagtagcttttaga 4631369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35423707 - 35423761
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||    
T  35423707 attattctctagcttatctcagttaatatagacaatgtataaatatatgcaaggt 35423761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 34912574 - 34912692
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaa-tccggacaacaccnnnnnnntaataaattcaatg 99  Q
    |||||||||| |||| |||||| ||||||||||| ||| |||||||||||||| || ||||||||  ||||||| |||        |||||||||||| |    
T  34912574 tattctctagcttagttcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaaccccggacaccacaaaaaaaataataaattcaaag 34912673  T
Q  100 ttctgtacaatattttgcc 118  Q
    || ||||||||||||||||    
T  34912674 ttttgtacaatattttgcc 34912692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 36078522 - 36078481
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  36078522 tttaaagagctttattttaactttgttttaaagtagctttta 36078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 5166382 - 5166426
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||    
T  5166382 ttaaagagctttattttaactttgttttaaagtagctttttgacc 5166426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 15427698 - 15427738
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  15427698 ttagctcagttgatatggacaatatataatatatgcaaggt 15427738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 20313207 - 20313163
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  20313207 ttaaagagctttattttaactttgttttaaagtaacttttagacc 20313163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 31972397 - 31972437
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  31972397 ttaaagagctttattttaactttgttttaaagtagctttta 31972437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 37522618 - 37522670
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  37522618 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 37522670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 38959604 - 38959564
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  38959604 ttaaagagctttattttaactttgttttaaagtagctttta 38959564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45474644 - 45474696
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  45474644 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 45474696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 10120533 - 10120576
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatataatata 46  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||    
T  10120533 tattctctagcttagctcagttgatatagacaatgtataatata 10120576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 1118094 - 1118136
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    |||||||  |||||||||||||||||||||| |||||||||||    
T  1118094 ttaaagagttttattttaactttgttttaaagtagcttttaga 1118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 9686462 - 9686504
Alignment:
Q  13 tttagctcagttaatatagacaatatataatatatgcaaggtg 55  Q
    ||||||||||||  ||||||||||| |||||||||||||||||    
T  9686462 tttagctcagttggtatagacaatacataatatatgcaaggtg 9686504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38709626 - 38709680
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||||| ||| ||||||| ||||||||||| ||| ||||||||||||||    
T  38709626 attattctctagcttaactcagttgatatagacaatgtataaatatatgcaaggt 38709680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 38879253 - 38879291
Alignment:
Q  173 aagaactttattttaactttgttttaaaatagcttttag 211  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  38879253 aagaactttattttaactttattttaaagtagcttttag 38879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3079637 - 3079706
Alignment:
Q  1 attattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt-gccggttcgaatcc 68  Q
    |||||||||||  ||| ||||||| ||||||||||| ||| |||||||||||||| || |||||||||||    
T  3079637 attattctctaacttaactcagttgatatagacaatgtataaatatatgcaaggtcgcgggttcgaatcc 3079706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 9799280 - 9799239
Alignment:
Q  172 aaagaactttattttaactttgttttaaaatagcttttagac 213  Q
    ||||| |||||||||| |||||||||||| ||||||||||||    
T  9799280 aaagagctttattttatctttgttttaaagtagcttttagac 9799239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 10120725 - 10120769
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||| ||||||||||| |||||||||||||    
T  10120725 ttaaagagttttattttaattttgttttaaagtagcttttagacc 10120769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 13490728 - 13490768
Alignment:
Q  11 agtttagctcagttaatatagacaatatataatatatgcaa 51  Q
    |||||||||||||| ||| ||||||| ||||||||||||||    
T  13490728 agtttagctcagttgatagagacaatgtataatatatgcaa 13490768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 13549535 - 13549491
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||||||  |||||||||    
T  13549535 ttaaagagttttattttaactttgttttaaaataatttttagacc 13549491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 23756718 - 23756758
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    ||||||||||| |||||||||||| |||| |||||||||||    
T  23756718 ttagctcagttgatatagacaatacataaaatatgcaaggt 23756758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 24926045 - 24926005
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||| ||||||||||||||||||| ||| |||||||||    
T  24926045 ttaaagagctttattttaactttgtttaaaagtagctttta 24926005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 41452755 - 41452787
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaa 35  Q
    |||||||||||||||||||||| ||||||||||    
T  41452755 tattctctagtttagctcagttgatatagacaa 41452787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 41452929 - 41452973
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| ||||||| |||||    
T  41452929 ttaaagagttttattttaactttgttttaaagtagctttaagacc 41452973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 132773 - 132818
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagaccc 215  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  132773 ttaaagagctttattttaactttgttttaaagtagcttttagaccc 132818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 7565 - 7609
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7565 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 4473 - 4431
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||| ||||||||||||||||||||||| |||||||||||    
T  4473 ttaaagagctttattttaactttgttttaaagtagcttttaga 4431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 7249 - 7205
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  7249 ttaaagagctttattttaactttgttttaaagtagcttttagacc 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 1588 - 1632
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  1588 ttaaagagctttattttaactttgttttaaagtagcttttagacc 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 110487 - 110447
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagctttta 210  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  110487 ttaaagaactttattttaactttgttttaaagtagctttta 110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 90420 - 90375
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| | |||||||||||||||||||||| |||||||||||||    
T  90420 tttaaaggattttattttaactttgttttaaagtagcttttagacc 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 110677 - 110625
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||  ||||||||||| ||||||||||| ||| ||||||||||||||    
T  110677 tattctctaacttagctcagttgatatagacaatttataaatatatgcaaggt 110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 212
Target Start/End: Complemental strand, 7528 - 7493
Alignment:
Q  177 actttattttaactttgttttaaaatagcttttaga 212  Q
    ||||||||||||||||||||||||||||||||||||    
T  7528 actttattttaactttgttttaaaatagcttttaga 7493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 1173 - 1210
Alignment:
Q  177 actttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  1173 actttattttaactttgttttaaaagagcttttagacc 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 15220 - 15175
Alignment:
Q  169 tttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||| | ||||||||||||||||||||||| |||||||||||||    
T  15220 tttaaaaagctttattttaactttgttttaaagtagcttttagacc 15175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 227 - 183
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| || ||||||||||    
T  227 ttaaagagctttattttaactttgttttaaagtaacttttagacc 183  T

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Target: scaffold0197 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 25824 - 25868
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| |||||||||||||    
T  25824 ttaaagagttttattttaactttgttttaaagtagcttttagacc 25868  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 138181 - 138129
Alignment:
Q  3 tattctctagtttagctcagttaatatagacaatatat-aatatatgcaaggt 54  Q
    |||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||    
T  138181 tattctctagcttagctcagttgatatagacaatgtataaatatatgcaaggt 138129  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 137989 - 137945
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| ||||||||||||||||||||||| ||  |||||||||    
T  137989 ttaaagagctttattttaactttgttttaaagtaatttttagacc 137945  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 99492 - 99536
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||    
T  99492 ttaaagacctttattttaactttgttttgaaataacttttagacc 99536  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 229196 - 229240
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||    
T  229196 ttaaaggactttattttaactttgttttaaaggagcttttagacc 229240  T

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Target: scaffold1822 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 357 - 401
Alignment:
Q  170 ttaaagaactttattttaactttgttttaaaatagcttttagacc 214  Q
    |||||||  |||||||||||||||||||||| || ||||||||||    
T  357 ttaaagagttttattttaactttgttttaaagtaacttttagacc 401  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 8693 - 8733
Alignment:
Q  14 ttagctcagttaatatagacaatatataatatatgcaaggt 54  Q
    |||||||| ||||||  ||||||||||||||||||||||||    
T  8693 ttagctcaattaataaggacaatatataatatatgcaaggt 8733  T

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