View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8375_low_20 (Length: 240)
Name: NF8375_low_20
Description: NF8375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8375_low_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 36730500 - 36730721
Alignment:
| Q |
19 |
gtcctggttcatcacttgctttaacggttatacatttgacaattgctggattgattcaatgttttgaatggaaaattaaaggtggtgataagattgatat |
118 |
Q |
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| T |
36730500 |
gtcctggttcatcacttgctttaacggttatacatttgacaattgctggattgattcaatgttttgaatggaaaattaaaggtggtgataagattgatat |
36730599 |
T |
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| Q |
119 |
ggaagaagggtcgtcattttctgctggattggcaaaacctctagtttgttaccctgttacttgttttaatcctttttaagttttatgattattgcattta |
218 |
Q |
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| T |
36730600 |
ggaagaagggtcgtcattttctgctggattggcaaaacctctagtttgttaccctgttacttgttttaatcctttttaagttttatgattattgcattta |
36730699 |
T |
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| Q |
219 |
ccatataagataaatgttgttt |
240 |
Q |
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| T |
36730700 |
ccgtataagataaatgttgttt |
36730721 |
T |
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