View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8375_low_21 (Length: 216)

Name: NF8375_low_21
Description: NF8375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8375_low_21
NF8375_low_21
[»] chr8 (34 HSPs)
chr8 (17-216)||(8897623-8897822)
chr8 (161-216)||(28407480-28407535)
chr8 (161-216)||(30454100-30454155)
chr8 (161-216)||(36720873-36720928)
chr8 (170-216)||(7136539-7136585)
chr8 (170-216)||(12670262-12670308)
chr8 (172-216)||(28817640-28817684)
chr8 (161-216)||(6760901-6760956)
chr8 (161-216)||(12625967-12626022)
chr8 (161-216)||(20870002-20870057)
chr8 (161-216)||(26102594-26102649)
chr8 (161-216)||(35261756-35261811)
chr8 (161-212)||(39460997-39461048)
chr8 (170-216)||(16225098-16225144)
chr8 (170-216)||(20284081-20284127)
chr8 (170-216)||(21070709-21070755)
chr8 (174-216)||(24245526-24245568)
chr8 (170-216)||(27507987-27508033)
chr8 (170-216)||(29877171-29877217)
chr8 (170-216)||(44530226-44530272)
chr8 (170-215)||(2626600-2626645)
chr8 (179-216)||(13160778-13160815)
chr8 (171-216)||(19729417-19729462)
chr8 (161-216)||(17823653-17823708)
chr8 (181-212)||(20869523-20869554)
chr8 (161-216)||(25250601-25250656)
chr8 (161-216)||(45071341-45071396)
chr8 (178-216)||(5135309-5135347)
chr8 (170-212)||(16013537-16013579)
chr8 (178-216)||(24365079-24365117)
chr8 (161-207)||(27468095-27468141)
chr8 (171-216)||(26954212-26954257)
chr8 (170-206)||(18164772-18164808)
chr8 (171-215)||(44781517-44781561)
[»] chr4 (54 HSPs)
chr4 (161-216)||(23501866-23501921)
chr4 (161-216)||(32484310-32484365)
chr4 (161-216)||(20225059-20225114)
chr4 (161-216)||(20225153-20225208)
chr4 (161-216)||(20639661-20639716)
chr4 (161-216)||(25629126-25629181)
chr4 (161-216)||(29207901-29207956)
chr4 (161-216)||(38755911-38755966)
chr4 (161-216)||(38786686-38786741)
chr4 (161-216)||(44363133-44363188)
chr4 (178-216)||(25463199-25463237)
chr4 (170-216)||(30690188-30690234)
chr4 (171-212)||(30639460-30639501)
chr4 (172-216)||(20405166-20405210)
chr4 (172-216)||(33836501-33836545)
chr4 (161-216)||(11394929-11394984)
chr4 (161-216)||(11404656-11404711)
chr4 (177-216)||(14983911-14983950)
chr4 (161-216)||(16408604-16408659)
chr4 (161-216)||(21647043-21647098)
chr4 (161-216)||(30352583-30352638)
chr4 (161-212)||(40553940-40553991)
chr4 (170-216)||(54175141-54175188)
chr4 (161-211)||(11054151-11054201)
chr4 (178-216)||(47482870-47482908)
chr4 (170-216)||(51865050-51865096)
chr4 (179-216)||(5648335-5648372)
chr4 (171-216)||(20908649-20908694)
chr4 (179-216)||(47444034-47444071)
chr4 (170-211)||(54730334-54730375)
chr4 (178-213)||(3580860-3580895)
chr4 (177-216)||(6430645-6430684)
chr4 (161-216)||(9832316-9832371)
chr4 (161-216)||(13256402-13256457)
chr4 (177-216)||(16911641-16911680)
chr4 (177-216)||(17043413-17043452)
chr4 (161-216)||(25388253-25388308)
chr4 (177-216)||(30581484-30581523)
chr4 (161-208)||(35532077-35532124)
chr4 (177-216)||(39029079-39029118)
chr4 (177-216)||(44718644-44718683)
chr4 (161-216)||(47528533-47528588)
chr4 (161-216)||(48598828-48598883)
chr4 (177-216)||(49938612-49938651)
chr4 (170-216)||(9987846-9987892)
chr4 (178-216)||(21489165-21489203)
chr4 (170-216)||(28494228-28494274)
chr4 (178-216)||(32478811-32478849)
chr4 (170-216)||(35567247-35567293)
chr4 (170-216)||(40915905-40915951)
chr4 (178-216)||(54967097-54967135)
chr4 (161-216)||(8473623-8473680)
chr4 (179-216)||(49796874-49796911)
chr4 (161-209)||(56322984-56323032)
[»] chr2 (30 HSPs)
chr2 (161-216)||(5841107-5841162)
chr2 (161-212)||(3633711-3633762)
chr2 (161-216)||(9671256-9671311)
chr2 (161-216)||(10543777-10543832)
chr2 (161-216)||(10546240-10546295)
chr2 (161-216)||(14444805-14444860)
chr2 (161-216)||(14530397-14530452)
chr2 (161-216)||(21779264-21779319)
chr2 (161-216)||(34080178-34080233)
chr2 (161-216)||(41409939-41409994)
chr2 (161-213)||(14544146-14544198)
chr2 (172-216)||(34766332-34766376)
chr2 (161-216)||(8455319-8455374)
chr2 (161-216)||(40579752-40579807)
chr2 (170-216)||(23488560-23488606)
chr2 (171-216)||(24890488-24890533)
chr2 (171-215)||(4794880-4794924)
chr2 (161-213)||(8575975-8576027)
chr2 (177-216)||(13245114-13245153)
chr2 (161-216)||(17896337-17896392)
chr2 (161-216)||(23397841-23397896)
chr2 (161-216)||(25079720-25079775)
chr2 (177-216)||(31158458-31158497)
chr2 (161-216)||(36871569-36871623)
chr2 (178-216)||(1289099-1289137)
chr2 (170-216)||(26684632-26684678)
chr2 (170-216)||(44643600-44643646)
chr2 (161-206)||(22371199-22371244)
chr2 (170-211)||(24860000-24860041)
chr2 (170-206)||(124926-124962)
[»] chr1 (42 HSPs)
chr1 (161-216)||(30395729-30395784)
chr1 (161-216)||(50606503-50606558)
chr1 (161-216)||(4349738-4349793)
chr1 (161-216)||(31382217-31382272)
chr1 (161-216)||(34725101-34725156)
chr1 (162-216)||(6925200-6925254)
chr1 (170-216)||(14617138-14617184)
chr1 (170-216)||(27474380-27474426)
chr1 (170-216)||(35253199-35253245)
chr1 (171-216)||(12126850-12126895)
chr1 (161-216)||(10668327-10668382)
chr1 (170-213)||(16120819-16120862)
chr1 (161-216)||(19414537-19414592)
chr1 (161-216)||(20004093-20004148)
chr1 (161-216)||(35005225-35005280)
chr1 (161-216)||(45402196-45402251)
chr1 (177-216)||(46247972-46248011)
chr1 (161-216)||(46991904-46991959)
chr1 (170-216)||(4587575-4587621)
chr1 (170-216)||(10378747-10378793)
chr1 (178-216)||(18944745-18944783)
chr1 (170-216)||(19701671-19701717)
chr1 (178-216)||(20169109-20169147)
chr1 (170-216)||(42304219-42304265)
chr1 (170-216)||(45264411-45264457)
chr1 (170-216)||(47214609-47214655)
chr1 (178-215)||(18724565-18724602)
chr1 (171-216)||(33594144-33594189)
chr1 (172-216)||(27201749-27201793)
chr1 (161-216)||(38478285-38478340)
chr1 (178-216)||(11596612-11596650)
chr1 (178-216)||(15505664-15505702)
chr1 (170-216)||(18741969-18742015)
chr1 (170-212)||(23796569-23796611)
chr1 (170-216)||(30555215-30555261)
chr1 (178-216)||(30682912-30682950)
chr1 (170-216)||(32632569-32632615)
chr1 (170-216)||(43768239-43768285)
chr1 (170-216)||(45812549-45812595)
chr1 (170-210)||(9939570-9939610)
chr1 (180-208)||(19386598-19386626)
chr1 (172-216)||(23768334-23768378)
[»] scaffold0168 (1 HSPs)
scaffold0168 (161-216)||(30654-30709)
[»] scaffold0057 (4 HSPs)
scaffold0057 (161-216)||(46908-46963)
scaffold0057 (161-216)||(24775-24830)
scaffold0057 (172-216)||(46721-46765)
scaffold0057 (161-216)||(43734-43790)
[»] scaffold0015 (1 HSPs)
scaffold0015 (161-216)||(48637-48692)
[»] chr7 (28 HSPs)
chr7 (161-216)||(21172012-21172067)
chr7 (161-216)||(32758336-32758391)
chr7 (161-216)||(42391103-42391158)
chr7 (161-216)||(42805603-42805658)
chr7 (161-216)||(48735125-48735180)
chr7 (171-216)||(10693086-10693131)
chr7 (161-209)||(42495865-42495913)
chr7 (161-216)||(7879715-7879770)
chr7 (170-213)||(21566516-21566559)
chr7 (161-216)||(31591112-31591167)
chr7 (161-216)||(40463953-40464008)
chr7 (161-216)||(45018926-45018981)
chr7 (161-216)||(47716538-47716593)
chr7 (170-216)||(2541031-2541077)
chr7 (178-216)||(18512473-18512511)
chr7 (178-216)||(27889336-27889374)
chr7 (170-216)||(35334828-35334874)
chr7 (180-216)||(42798746-42798782)
chr7 (161-216)||(27629711-27629766)
chr7 (177-216)||(34626227-34626266)
chr7 (161-216)||(39123972-39124027)
chr7 (170-216)||(18747564-18747610)
chr7 (165-215)||(23231635-23231685)
chr7 (179-216)||(19266527-19266564)
chr7 (183-216)||(33500592-33500625)
chr7 (161-214)||(35787272-35787325)
chr7 (170-215)||(38262208-38262253)
chr7 (161-216)||(29907497-29907550)
[»] chr6 (21 HSPs)
chr6 (161-216)||(1347039-1347094)
chr6 (161-216)||(1354760-1354815)
chr6 (161-216)||(12892086-12892141)
chr6 (161-216)||(23930130-23930185)
chr6 (161-216)||(29355858-29355913)
chr6 (161-214)||(26097237-26097290)
chr6 (161-216)||(6808472-6808527)
chr6 (177-216)||(32579502-32579541)
chr6 (178-216)||(12221935-12221973)
chr6 (161-211)||(25557805-25557855)
chr6 (161-216)||(2166413-2166468)
chr6 (161-216)||(2178046-2178101)
chr6 (161-216)||(9161201-9161256)
chr6 (177-216)||(10734924-10734963)
chr6 (177-216)||(11395838-11395877)
chr6 (161-216)||(12885990-12886045)
chr6 (161-216)||(13267802-13267857)
chr6 (177-216)||(24097654-24097693)
chr6 (170-216)||(14975102-14975148)
chr6 (163-213)||(20906791-20906841)
chr6 (177-213)||(29016301-29016337)
[»] chr5 (32 HSPs)
chr5 (161-216)||(16028627-16028682)
chr5 (161-216)||(16957391-16957446)
chr5 (161-216)||(32703499-32703554)
chr5 (161-216)||(38879660-38879715)
chr5 (170-216)||(25622537-25622583)
chr5 (176-216)||(10306492-10306532)
chr5 (161-216)||(4619107-4619162)
chr5 (161-216)||(7368473-7368528)
chr5 (161-216)||(8169987-8170042)
chr5 (161-216)||(12006331-12006386)
chr5 (161-216)||(13801770-13801825)
chr5 (161-216)||(21784335-21784390)
chr5 (161-216)||(24448967-24449022)
chr5 (161-216)||(30877567-30877622)
chr5 (161-216)||(34154817-34154872)
chr5 (161-216)||(41014395-41014450)
chr5 (177-216)||(43574683-43574722)
chr5 (170-214)||(10943857-10943900)
chr5 (172-216)||(27328831-27328875)
chr5 (179-214)||(1565511-1565546)
chr5 (161-216)||(20135683-20135738)
chr5 (161-216)||(22861672-22861727)
chr5 (161-216)||(35710388-35710443)
chr5 (161-216)||(43334282-43334336)
chr5 (170-216)||(4654427-4654473)
chr5 (170-212)||(7097772-7097814)
chr5 (178-216)||(24323725-24323763)
chr5 (178-216)||(24360349-24360387)
chr5 (170-216)||(39801593-39801639)
chr5 (171-216)||(19142956-19143001)
chr5 (180-216)||(21542489-21542525)
chr5 (161-209)||(32354211-32354259)
[»] chr3 (39 HSPs)
chr3 (161-216)||(353352-353407)
chr3 (161-216)||(13628793-13628848)
chr3 (161-216)||(13730605-13730660)
chr3 (161-216)||(24851304-24851359)
chr3 (161-216)||(30452894-30452949)
chr3 (161-216)||(39203613-39203668)
chr3 (161-216)||(40272815-40272870)
chr3 (177-216)||(54374364-54374403)
chr3 (161-216)||(54484790-54484845)
chr3 (170-216)||(34771376-34771422)
chr3 (161-214)||(1217189-1217242)
chr3 (161-216)||(15797319-15797374)
chr3 (161-216)||(22122920-22122975)
chr3 (161-216)||(31592946-31593001)
chr3 (177-216)||(46421054-46421093)
chr3 (161-216)||(49013476-49013531)
chr3 (170-216)||(14987058-14987104)
chr3 (170-216)||(45948850-45948896)
chr3 (161-214)||(516513-516566)
chr3 (171-216)||(29366733-29366778)
chr3 (161-213)||(10484619-10484671)
chr3 (178-214)||(30928167-30928203)
chr3 (161-216)||(5173722-5173777)
chr3 (177-216)||(8247706-8247745)
chr3 (161-216)||(10795426-10795481)
chr3 (161-212)||(12914038-12914089)
chr3 (161-216)||(22609864-22609919)
chr3 (161-216)||(25517173-25517228)
chr3 (177-216)||(33926182-33926221)
chr3 (161-216)||(45786217-45786272)
chr3 (177-216)||(52926238-52926277)
chr3 (170-216)||(829454-829500)
chr3 (177-215)||(9607305-9607343)
chr3 (170-216)||(26573226-26573272)
chr3 (179-213)||(46169988-46170022)
chr3 (170-215)||(6411834-6411879)
chr3 (171-216)||(34420656-34420701)
chr3 (161-206)||(47624208-47624253)
chr3 (172-216)||(35418003-35418047)
[»] scaffold0180 (1 HSPs)
scaffold0180 (170-216)||(24145-24191)
[»] scaffold0311 (1 HSPs)
scaffold0311 (171-216)||(10887-10932)
[»] scaffold0223 (1 HSPs)
scaffold0223 (161-216)||(11206-11261)
[»] scaffold1176 (1 HSPs)
scaffold1176 (170-215)||(1599-1644)
[»] scaffold0187 (2 HSPs)
scaffold0187 (180-216)||(10072-10108)
scaffold0187 (180-216)||(20400-20436)
[»] scaffold0258 (1 HSPs)
scaffold0258 (161-216)||(13027-13082)
[»] scaffold0954 (1 HSPs)
scaffold0954 (165-215)||(3622-3672)
[»] scaffold0018 (1 HSPs)
scaffold0018 (161-211)||(72870-72920)
[»] scaffold0049 (1 HSPs)
scaffold0049 (172-216)||(59056-59100)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 7e-73; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 17 - 216
Target Start/End: Original strand, 8897623 - 8897822
Alignment:
Q  17 atcaaatctaaacggttcgtaaaaagatgacttgatacataaacttaagggagactgtctcagttagtcattaattaacaaaggcataacactgctatct 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8897623 atcaaatctaaacggttcgtaaaaagatgacttgatacataaacttaagggagactgtctcagttagtcattaattaacaaaggcataacactgctatct 8897722  T
Q  117 ctttaatctttaaaagcatagctatnnnnnnnnnnnnnnnnnnngggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||||||||||||                   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8897723 ctttaatctttaaaagcatagctataaaaatacaataaaaaaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 8897822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 28407535 - 28407480
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||||||||||||||||||| | ||||||||||||||||||||||    
T  28407535 gggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccac 28407480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 30454100 - 30454155
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  30454100 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 30454155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 36720928 - 36720873
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  36720928 gggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccac 36720873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 7136539 - 7136585
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||    
T  7136539 ggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 7136585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 12670262 - 12670308
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  12670262 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 12670308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 28817640 - 28817684
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  28817640 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 28817684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 6760956 - 6760901
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| ||||||| |||||||||||||    
T  6760956 gggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccac 6760901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 12626022 - 12625967
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  12626022 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccac 12625967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 20870057 - 20870002
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||| ||||||||||||||    
T  20870057 gggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccac 20870002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 26102649 - 26102594
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||| ||||||||||||||||||||||||    
T  26102649 gggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccac 26102594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 35261811 - 35261756
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  35261811 gggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccac 35261756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 39460997 - 39461048
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||    
T  39460997 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 39461048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 16225144 - 16225098
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||    
T  16225144 ggtgcactaaagctcccgcatatgcggggtccgggaagggatcccac 16225098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 20284081 - 20284127
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||    
T  20284081 ggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccac 20284127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 21070709 - 21070755
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||    
T  21070709 ggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccac 21070755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 24245568 - 24245526
Alignment:
Q  174 cagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  24245568 cagtaaagctcccgcatacgcagggtccaggaaggggtcccac 24245526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 27508033 - 27507987
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  27508033 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccac 27507987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 29877217 - 29877171
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  29877217 ggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccac 29877171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 44530272 - 44530226
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  44530272 ggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccac 44530226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 2626645 - 2626600
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||||| | |||||||||||||||||||||| ||||||||||||||    
T  2626645 ggtgcactgaagctcccgcatatgcagggtctgggaaggggtccca 2626600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 13160815 - 13160778
Alignment:
Q  179 aagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13160815 aagctcccgcatacgcagggtccgggaaggggtcccac 13160778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 19729462 - 19729417
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccac 19729417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 17823708 - 17823653
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||| ||||||||||||| ||||||||||| ||||    
T  17823708 gggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccac 17823653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 20869523 - 20869554
Alignment:
Q  181 gctcccgcatatgcagggtccgggaaggggtc 212  Q
    ||||||||||||||||||||||||||||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtc 20869554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 25250656 - 25250601
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||| ||||||||||||| |||| ||||||||||||||||    
T  25250656 gggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccac 25250601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 45071396 - 45071341
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||||||||||| ||| ||||||||||||||||||||    
T  45071396 gggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccac 45071341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 5135309 - 5135347
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  5135309 aaagctcctgcatacgcagggtccgggaaggggtcccac 5135347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 16013579 - 16013537
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    |||||| ||||||||||||||| |||||||| |||||||||||    
T  16013579 ggtgcactaaagctcccgcataggcagggtctgggaaggggtc 16013537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 24365079 - 24365117
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccac 24365117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 27468095 - 27468141
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaag 207  Q
    |||||||  |||||| ||||||||||||||| |||||||||||||||    
T  27468095 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 26954257 - 26954212
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| ||||||||||||||||||  |||| |||||||||||||||    
T  26954257 gtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccac 26954212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 18164772 - 18164808
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaa 206  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  18164772 ggtgcactaaagctcccgcatacgcagggtccgggaa 18164808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 44781517 - 44781561
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    ||||| ||||||||||||||| |||||||| |||| |||||||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtccca 44781561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 23501921 - 23501866
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  23501921 gggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccac 23501866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 32484365 - 32484310
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  32484365 gggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccac 32484310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 20225114 - 20225059
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  20225114 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 20225059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 20225208 - 20225153
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||||||||||    
T  20225208 gggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 20225153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 20639661 - 20639716
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  20639661 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 20639716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 25629181 - 25629126
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  25629181 gggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccac 25629126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 29207901 - 29207956
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  29207901 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 29207956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 38755911 - 38755966
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  38755911 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 38755966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 38786741 - 38786686
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  38786741 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 38786686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 44363133 - 44363188
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  44363133 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 44363188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 25463237 - 25463199
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccac 25463199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 30690188 - 30690234
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  30690188 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 30690234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 30639501 - 30639460
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  30639501 gtgcactaaagctcccgcatatgcagggtccgggaaggggtc 30639460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 20405210 - 20405166
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| |||||||||||||||||| |||||||||||||||||||||    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 20405166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 33836501 - 33836545
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  33836501 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 33836545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 11394984 - 11394929
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  11394984 gggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccac 11394929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 11404711 - 11404656
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  11404711 gggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccac 11404656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 14983950 - 14983911
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  14983950 taaagctcccgcatacgcagggtccgggaaggggtcccac 14983911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 16408604 - 16408659
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||||| ||||    
T  16408604 gggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccac 16408659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 21647098 - 21647043
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| ||||| |||||||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccac 21647043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 30352583 - 30352638
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  30352583 gggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccac 30352638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 40553940 - 40553991
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||    
T  40553940 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtc 40553991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 54175188 - 54175141
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtcc-gggaaggggtcccac 216  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  54175188 ggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccac 54175141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 11054151 - 11054201
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggt 211  Q
    |||||||  |||||| || ||||||||||||||||||||||||||||||||    
T  11054151 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggt 11054201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 47482870 - 47482908
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  47482870 aaagctcccgcatacgcagggtccgggaaggggtcccac 47482908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 51865050 - 51865096
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccac 51865096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 5648372 - 5648335
Alignment:
Q  179 aagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5648372 aagctcccgcatacgcagggtccgggaaggggtcccac 5648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 20908649 - 20908694
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccac 20908694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 47444071 - 47444034
Alignment:
Q  179 aagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  47444071 aagctcctgcatatgcagggtccgggaaggggtcccac 47444034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 54730375 - 54730334
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggt 211  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  54730375 ggtgcactaaagctcccgcatacgcagggtccgggaaggggt 54730334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 3580860 - 3580895
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    ||||||||| ||||||||||||||||||||||||||    
T  3580860 aaagctcccacatatgcagggtccgggaaggggtcc 3580895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 6430645 - 6430684
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  6430645 taaagctcccgcatacgcagggtccgggaagtggtcccac 6430684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 9832316 - 9832371
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || || ||| ||||||||||||||||||||||||||||||    
T  9832316 gggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccac 9832371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 13256402 - 13256457
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  13256402 gggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccac 13256457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 16911680 - 16911641
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  16911680 taaagctcccgcgtacgcagggtccgggaaggggtcccac 16911641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 17043413 - 17043452
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  17043413 taaagctccagcatatgcagggtctgggaaggggtcccac 17043452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 25388308 - 25388253
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  25388308 gggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccac 25388253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 30581484 - 30581523
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  30581484 taaagctcctacatatgcagggtccgggaaggggtcccac 30581523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 35532124 - 35532077
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaagg 208  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||    
T  35532124 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 39029079 - 39029118
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  39029079 taaagctcccgcatatgcagggtccggaaagtggtcccac 39029118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 44718683 - 44718644
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  44718683 taaagctcccgcatacgcagggtctgggaaggggtcccac 44718644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 47528533 - 47528588
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||||| ||||| |||||||||||||||||||||||    
T  47528533 gggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccac 47528588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 48598828 - 48598883
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||| ||||||||| ||||||||||||||||||||    
T  48598828 gggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccac 48598883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 49938612 - 49938651
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  49938612 taaagctcccgcatatgcagggtatgggaaggggtcccac 49938651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 9987846 - 9987892
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||||||| ||||  ||||||||||||||    
T  9987846 ggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccac 9987892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 21489203 - 21489165
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccac 21489165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 28494274 - 28494228
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| || |||||||||||||||||| || |||||||||||||||    
T  28494274 ggtgcactagagctcccgcatatgcaggatctgggaaggggtcccac 28494228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 32478811 - 32478849
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| || |||||||||||||||||||||    
T  32478811 aaagctcccgcatacgctgggtccgggaaggggtcccac 32478849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 35567293 - 35567247
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  35567293 ggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccac 35567247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 40915951 - 40915905
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| | ||||||||||||| ||||||||||||||||| ||||||    
T  40915951 ggtgcactgaagctcccgcatacgcagggtccgggaagggctcccac 40915905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 54967135 - 54967097
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  54967135 aaagctcccgcatatgtagggtacgggaaggggtcccac 54967097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 8473623 - 8473680
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgca-gggtcc-gggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  8473623 gggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccac 8473680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 49796911 - 49796874
Alignment:
Q  179 aagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccac 49796874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 56323032 - 56322984
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggg 209  Q
    |||||||  |||||| |||||||||||||||| | ||||||||||||||    
T  56323032 gggcaacccggtgcactaaagctcccgcatatccggggtccgggaaggg 56322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 5841162 - 5841107
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||    
T  5841162 gggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 5841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 3633711 - 3633762
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  3633711 gggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 9671311 - 9671256
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  9671311 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 9671256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 10543832 - 10543777
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10543832 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 10543777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 10546295 - 10546240
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10546295 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 10546240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 14444860 - 14444805
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  14444860 gggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 14444805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 14530452 - 14530397
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  14530452 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 14530397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 21779264 - 21779319
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  21779264 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 21779319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 34080233 - 34080178
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||| |||||||||||||||||||||||||||||||||||    
T  34080233 gggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccac 34080178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 41409994 - 41409939
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||||||||||||||||||||||||||||||||||||    
T  41409994 gggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccac 41409939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 14544198 - 14544146
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    |||||||| |||||| ||||||||||||||| ||||||||| |||||||||||    
T  14544198 gggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtcc 14544146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 34766376 - 34766332
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 34766332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 8455319 - 8455374
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  8455319 gggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccac 8455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 40579752 - 40579807
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||  |||||||||||||||||||||||    
T  40579752 gggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccac 40579807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 23488606 - 23488560
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||    
T  23488606 ggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccac 23488560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 24890533 - 24890488
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccac 24890488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 4794924 - 4794880
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    ||||| || |||||||||||||||||| |||||||||||||||||    
T  4794924 gtgcactagagctcccgcatatgcaggatccgggaaggggtccca 4794880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 8576027 - 8575975
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    |||||||  |||||| |||||||||| |||| |||||||||||||||||||||    
T  8576027 gggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 13245114 - 13245153
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  13245114 taaagctcccgtatatgcatggtccgggaaggggtcccac 13245153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 17896392 - 17896337
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| | |||| |||||||||| |||| |||||||||| |||||||||||||    
T  17896392 gggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccac 17896337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 23397896 - 23397841
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||| |||||||| |||||||||||||    
T  23397896 gggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccac 23397841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 25079720 - 25079775
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||  ||||| ||||||||||||||||||||||||    
T  25079720 gggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccac 25079775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 31158458 - 31158497
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  31158458 taaagctcccgcatacgcagggtctgggaaggggtcccac 31158497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 36871623 - 36871569
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  36871623 gggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccac 36871569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 1289137 - 1289099
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  1289137 aaagctcccgcatatgcatgatccgggaaggggtcccac 1289099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 26684632 - 26684678
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| ||||||| ||||||| ||||||||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccac 26684678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 44643646 - 44643600
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||| ||||||||||| |||||||| |||||||||||||||    
T  44643646 ggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccac 44643600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 22371244 - 22371199
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaa 206  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||    
T  22371244 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 24860000 - 24860041
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggt 211  Q
    |||||| ||||||||||||||| |||||||||| ||||||||    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggt 24860041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 124926 - 124962
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaa 206  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  124926 ggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 30395729 - 30395784
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||    
T  30395729 gggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 30395784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 50606558 - 50606503
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  50606558 gggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccac 50606503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 4349793 - 4349738
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4349793 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 4349738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 31382217 - 31382272
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  ||| |||||||||||||||||||||||||||| ||||||||||||||    
T  31382217 gggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccac 31382272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 34725101 - 34725156
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  34725101 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 34725156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 6925254 - 6925200
Alignment:
Q  162 ggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||    
T  6925254 ggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccac 6925200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 14617184 - 14617138
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  14617184 ggtgcactaaagctcccgcatatgcagggtccgggaagggatcccac 14617138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 27474426 - 27474380
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  27474426 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 27474380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 35253199 - 35253245
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  35253199 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 35253245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 12126850 - 12126895
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccac 12126895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 10668382 - 10668327
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| |||||| |||||||||||||||||    
T  10668382 gggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccac 10668327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 16120862 - 16120819
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  16120862 ggtgcattaaagctcccgcatatgcaggggccgggaaggggtcc 16120819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 19414592 - 19414537
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||| ||||||||||||||||    
T  19414592 gggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccac 19414537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 20004093 - 20004148
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| ||||| |||||||||||||||    
T  20004093 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccac 20004148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 35005280 - 35005225
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||| |||||||| ||||||||||||||||||||||||    
T  35005280 gggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccac 35005225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 45402251 - 45402196
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| |||||||| |||||||||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccac 45402196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 46247972 - 46248011
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  46247972 taaagctcccgcatacgcagggtccgggaaggggtcccac 46248011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 46991959 - 46991904
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||| |||| ||||||||||||||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccac 46991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 4587575 - 4587621
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  4587575 ggtgcactgaagctcccgcataggcagggtccgggaaggggtcccac 4587621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 10378747 - 10378793
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||    
T  10378747 ggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccac 10378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 18944783 - 18944745
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  18944783 aaagctcccgcatacgcagggtccgggaaggggtcccac 18944745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 19701717 - 19701671
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||    
T  19701717 ggtgcactaaagctcccgcatacgcagggtccgggaaggggccccac 19701671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 20169109 - 20169147
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  20169109 aaagctcccgcatatgcagggtccgggaaggagtcccac 20169147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 42304219 - 42304265
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||    
T  42304219 ggtgcactaaagctcccacatacgcagggtccgggaaggggtcccac 42304265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 45264411 - 45264457
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||||||||||||||||||| | |||||||||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccac 45264457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 47214655 - 47214609
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||    
T  47214655 ggtgcactagagctcccgcatatgcagggtctgggaaggggtcccac 47214609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 18724565 - 18724602
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||||||||||||||| |||||||||||||||||||||    
T  18724565 aaagctcccgcatatgtagggtccgggaaggggtccca 18724602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 33594144 - 33594189
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccac 33594189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 27201793 - 27201749
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||    
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccac 27201749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 38478285 - 38478340
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||||||||||||||||||||| |||||||| ||||    
T  38478285 gggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccac 38478340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 11596650 - 11596612
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccac 11596612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 15505702 - 15505664
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccac 15505664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 18741969 - 18742015
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||| |||||| |||||||| |||||||||||||||    
T  18741969 ggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccac 18742015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 23796611 - 23796569
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    |||||| ||||||||| |||||||||||||| |||||||||||    
T  23796611 ggtgcactaaagctccagcatatgcagggtctgggaaggggtc 23796569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 30555261 - 30555215
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||| |||||| |||||||||| |||||||||||||    
T  30555261 ggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccac 30555215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 30682950 - 30682912
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  30682950 aaagctcccgcatacgcacggtccgggaaggggtcccac 30682912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 32632569 - 32632615
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| | |||||||||||||||||||||  |||||||||||||||    
T  32632569 ggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccac 32632615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 43768285 - 43768239
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||| ||| |||||||| |||||||||||||||    
T  43768285 ggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccac 43768239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 45812549 - 45812595
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| || ||||||||||||||||||||  |||||||||||||||    
T  45812549 ggtgcactagagctcccgcatatgcagggtttgggaaggggtcccac 45812595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 9939610 - 9939570
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaagggg 210  Q
    |||||| ||||||||||||||| |||||||||| |||||||    
T  9939610 ggtgcactaaagctcccgcatacgcagggtccgagaagggg 9939570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 208
Target Start/End: Original strand, 19386598 - 19386626
Alignment:
Q  180 agctcccgcatatgcagggtccgggaagg 208  Q
    |||||||||||||||||||||||||||||    
T  19386598 agctcccgcatatgcagggtccgggaagg 19386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 23768334 - 23768378
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| |||||||| ||||||| |||||||    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccac 23768378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 30709 - 30654
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  30709 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 30654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 46963 - 46908
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  46963 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 46908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 24775 - 24830
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||| || |||| ||||||||||||||| ||||||| ||||||||||||||||    
T  24775 gggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccac 24830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 46721 - 46765
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||    
T  46721 tgcattaaagctcccgcatacgcagggtctgggaaggggtcccac 46765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 43790 - 43734
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccg-ggaaggggtcccac 216  Q
    ||||||||  ||||| || ||||||||||||||||||||||| | ||||||||||||    
T  43790 gggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccac 43734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 48637 - 48692
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  48637 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 48692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 21172012 - 21172067
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  21172012 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 21172067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 32758391 - 32758336
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  32758391 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 32758336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 42391103 - 42391158
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  42391103 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 42391158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 42805658 - 42805603
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||||||||||    
T  42805658 gggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 42805603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 48735125 - 48735180
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  48735125 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 48735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 10693086 - 10693131
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  10693086 gtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 10693131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 42495865 - 42495913
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggg 209  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  42495865 gggcaacggggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 7879770 - 7879715
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  7879770 gggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccac 7879715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 21566559 - 21566516
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    |||||| ||||||||||||||||||||||| |||||||||||||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcc 21566516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 31591112 - 31591167
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||| ||||||||||||||||||||    
T  31591112 gggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccac 31591167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 40464008 - 40463953
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| |||||| | ||||||||||||| |||||||||| |||||||||||||    
T  40464008 gggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccac 40463953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 45018926 - 45018981
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  45018926 gggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccac 45018981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 47716593 - 47716538
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  ||||||  ||||||||||||||||| |||||||||||||||||||||    
T  47716593 gggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccac 47716538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 2541031 - 2541077
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||    
T  2541031 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccac 2541077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 18512473 - 18512511
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  18512473 aaagctcccgcatacgcagggtccgggaaggggtcccac 18512511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 27889336 - 27889374
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  27889336 aaagctcccgcatacgcagggtccgggaaggggtcccac 27889374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 35334828 - 35334874
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  35334828 ggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccac 35334874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 42798782 - 42798746
Alignment:
Q  180 agctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||||||||||||||| |||||||||    
T  42798782 agctcccgcatatgcagggtccgggaaagggtcccac 42798746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 27629766 - 27629711
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||| |||||||||||||| |||||||||||||||||    
T  27629766 gggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccac 27629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 34626227 - 34626266
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  34626227 taaagctcccgcatacgcagggtccgggaagggatcccac 34626266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 39124027 - 39123972
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| || ||||||  ||||||||| |||| ||||||||||||||||||||||||    
T  39124027 gggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccac 39123972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 18747610 - 18747564
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| ||||||| | ||||||||||||||    
T  18747610 ggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccac 18747564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 23231685 - 23231635
Alignment:
Q  165 aactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||| |||||| ||||||| ||||||| ||||||| |||||||||||||||    
T  23231685 aactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtccca 23231635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 19266564 - 19266527
Alignment:
Q  179 aagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccac 19266527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 33500625 - 33500592
Alignment:
Q  183 tcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  33500625 tcccgcatacgcagggtccgggaaggggtcccac 33500592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 35787272 - 35787325
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccc 214  Q
    |||||||  |||||| | ||||||||||||| ||| ||||||||||||||||||    
T  35787272 gggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtccc 35787325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 38262208 - 38262253
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||||| ||||||||||||||| |||| || |||||||||||||||    
T  38262208 ggtgcactaaagctcccgcatacgcagtgttcgggaaggggtccca 38262253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 29907550 - 29907497
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||  |||||||||||| ||||||||||    
T  29907550 gggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccac 29907497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 1347094 - 1347039
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  1347094 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 1347039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 1354760 - 1354815
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  1354760 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 1354815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 12892141 - 12892086
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||||||||||    
T  12892141 gggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 12892086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 23930130 - 23930185
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  23930130 gggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccac 23930185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 29355858 - 29355913
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  29355858 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 29355913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 26097290 - 26097237
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccc 214  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||    
T  26097290 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccc 26097237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 6808527 - 6808472
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||  |||||||||||||||||||||||    
T  6808527 gggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccac 6808472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 32579541 - 32579502
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  32579541 taaagctcccgcatatgcagggtctgggaaggggtcccac 32579502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 12221935 - 12221973
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  12221935 aaagctcccgcatacgcagggtccgggaaggggtcccac 12221973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 25557855 - 25557805
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggt 211  Q
    |||||||  |||||| || ||||||||||||||||||||||||||||||||    
T  25557855 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggt 25557805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 2166413 - 2166468
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||| ||||  ||||||||||||||||||||||    
T  2166413 gggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccac 2166468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 2178046 - 2178101
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||| ||||  ||||||||||||||||||||||    
T  2178046 gggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccac 2178101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 9161256 - 9161201
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  9161256 gggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccac 9161201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 10734924 - 10734963
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  10734924 taaagctcccgcatacgcagggtccgggaagggggcccac 10734963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 11395877 - 11395838
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  11395877 taaagctcccgcatacgcaggatccgggaaggggtcccac 11395838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 12886045 - 12885990
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||| |||| |||||||| |||||||||||||||    
T  12886045 gggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccac 12885990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 13267857 - 13267802
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  13267857 gggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccac 13267802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 24097693 - 24097654
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  24097693 taaagcttccgcatacgcagggtccgggaaggggtcccac 24097654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 14975102 - 14975148
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||| ||||||||||||| |||| ||||||||||||||||    
T  14975102 ggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccac 14975148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 20906791 - 20906841
Alignment:
Q  163 gcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    |||||| ||| || |||||||||||||||||| ||||| ||||||||||||    
T  20906791 gcaacttggttcactaaagctcccgcatatgcggggtctgggaaggggtcc 20906841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 29016301 - 29016337
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  29016301 taaagctcccgcatacgcagggtctgggaaggggtcc 29016337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 16028627 - 16028682
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  16028627 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 16028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 16957446 - 16957391
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  16957446 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 16957391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 32703554 - 32703499
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  32703554 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 32703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 38879715 - 38879660
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  38879715 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 38879660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 25622583 - 25622537
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  25622583 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 25622537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 10306492 - 10306532
Alignment:
Q  176 gtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  10306492 gtaaagctcccgcatacgcagggtccgggaaggggtcccac 10306532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 4619107 - 4619162
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||| ||||||||| |||||||||||||||||||||    
T  4619107 gggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccac 4619162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 7368528 - 7368473
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||||| |||||||||||||||||||||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccac 7368473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 8169987 - 8170042
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | || |||||||||||||||||||||||||||||||||||    
T  8169987 gggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccac 8170042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 12006331 - 12006386
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| |||||||| |||||||||||||||    
T  12006331 gggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccac 12006386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 13801770 - 13801825
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||| ||||||||| |||||||||||||||||||||    
T  13801770 gggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccac 13801825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 21784335 - 21784390
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| |||||| |||| |||||||||| ||||||||||| ||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccac 21784390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 24449022 - 24448967
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  24449022 gggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccac 24448967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 30877567 - 30877622
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||||| |||||||||||||||||||||||||||||    
T  30877567 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccac 30877622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 34154817 - 34154872
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||| ||||||||||||||||||||||||||||||||    
T  34154817 gggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccac 34154872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 41014450 - 41014395
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||| ||||||||||||||    
T  41014450 gggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccac 41014395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 43574722 - 43574683
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43574722 taaagctcccgcatacgcagggtccgggaaggggtcccac 43574683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 10943857 - 10943900
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccc 214  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  10943857 ggtgcactaaagctcccgcat-tgcagggtccgggaaggggtccc 10943900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 27328875 - 27328831
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccac 27328831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Complemental strand, 1565546 - 1565511
Alignment:
Q  179 aagctcccgcatatgcagggtccgggaaggggtccc 214  Q
    |||||||| |||||||||||||||||||||||||||    
T  1565546 aagctcccacatatgcagggtccgggaaggggtccc 1565511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 20135738 - 20135683
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||||| |||||||| |||||||||||||||||||||    
T  20135738 gggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccac 20135683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 22861672 - 22861727
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| | |||||| || |||||||||||||||||||| || |||||||||||||    
T  22861672 gggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccac 22861727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 35710443 - 35710388
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||| | ||||||||||||||||||    
T  35710443 gggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccac 35710388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 43334336 - 43334282
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||  ||||||||||||||||||||||||    
T  43334336 gggcaacccggtgcactaaagctcccgcatc-gcagggtccgggaaggggtcccac 43334282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 4654427 - 4654473
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||||||||||| || |||||| ||||||    
T  4654427 ggtgcactaaagctcccgcatatgcagggttcgagaagggatcccac 4654473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Original strand, 7097772 - 7097814
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtc 7097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 24323725 - 24323763
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  24323725 aaagctcccgcatatacagggtctgggaaggggtcccac 24323763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 24360349 - 24360387
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  24360349 aaagctcccgcatatacagggtctgggaaggggtcccac 24360387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 39801639 - 39801593
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| | |||||| |||||||||||||||    
T  39801639 ggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccac 39801593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 19142956 - 19143001
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| |||| |||||||||| ||| ||||||||||||||||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccac 19143001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 21542489 - 21542525
Alignment:
Q  180 agctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||||||| |||| |||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccac 21542525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 32354259 - 32354211
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggg 209  Q
    |||||||  |||||| |||||||||||||||  ||||||||||||||||    
T  32354259 gggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 353352 - 353407
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||||||||||    
T  353352 gggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 353407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 13628793 - 13628848
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  13628793 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 13628848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 13730605 - 13730660
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||||||||||    
T  13730605 gggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccac 13730660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 24851304 - 24851359
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24851304 gggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccac 24851359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 30452949 - 30452894
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||||    
T  30452949 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 30452894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 39203668 - 39203613
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  39203668 gggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccac 39203613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 40272815 - 40272870
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  40272815 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 40272870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 54374364 - 54374403
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  54374364 taaagctcccgcatatgcagggtccgggaaggggtcccac 54374403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 54484845 - 54484790
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  54484845 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 54484790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 34771376 - 34771422
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  34771376 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 34771422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 1217242 - 1217189
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccc 214  Q
    |||||||  |||||| || |||||||||||||||||||||||||||||||||||    
T  1217242 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtccc 1217189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 15797374 - 15797319
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||||| |||||||||||||||||||||||||||||    
T  15797374 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccac 15797319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 22122920 - 22122975
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||| |||||||||||||||||||||||||||||||    
T  22122920 gggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccac 22122975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 31593001 - 31592946
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||||||||||||||||||||||||||| |||||||    
T  31593001 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccac 31592946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 46421054 - 46421093
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccac 46421093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 49013476 - 49013531
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||||||||| ||||| |||||||||||||||||||||    
T  49013476 gggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccac 49013531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 14987104 - 14987058
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||    
T  14987104 ggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccac 14987058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 45948850 - 45948896
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccac 45948896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 516566 - 516513
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccc 214  Q
    |||||||  |||||| ||||||||||||||| |||||||| |||||||||||||    
T  516566 gggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtccc 516513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 29366733 - 29366778
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||    
T  29366733 gtgcactaaagctcccacatacgcagggtccgggaaggggtcccac 29366778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 10484619 - 10484671
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    |||||||  |||||| ||||||||||||||| ||||||||| |||||||||||    
T  10484619 gggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 30928167 - 30928203
Alignment:
Q  178 aaagctcccgcatatgcagggtccgggaaggggtccc 214  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30928167 aaagctcccacatatgcagggtccgggaaggggtccc 30928203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 5173722 - 5173777
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||||||||| ||| |||||||||||||| |||||    
T  5173722 gggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccac 5173777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 8247706 - 8247745
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccac 8247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 10795426 - 10795481
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||||||||||| ||||||||| ||||||||||||||    
T  10795426 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccac 10795481  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 12914038 - 12914089
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtc 212  Q
    |||||||  |||||| | |||||||||||||||||||||| |||||||||||    
T  12914038 gggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtc 12914089  T

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Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 22609919 - 22609864
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| | ||||||||||||| ||| ||||||||||||||||||||    
T  22609919 gggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccac 22609864  T

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Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 25517173 - 25517228
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||| ||||| ||||| ||||||||||||||||||    
T  25517173 gggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccac 25517228  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 33926221 - 33926182
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  33926221 taaagctctcgcatatgcagggtccaggaaggggtcccac 33926182  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 45786217 - 45786272
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| ||||||||| ||||  ||||||||||||||||||||||||    
T  45786217 gggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccac 45786272  T

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Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 52926238 - 52926277
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  52926238 taaagctcccgcatacgcagggtccgggaaggtgtcccac 52926277  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 829454 - 829500
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||| ||||| ||||||| ||||||||||||||||    
T  829454 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccac 829500  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 9607343 - 9607305
Alignment:
Q  177 taaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  9607343 taaagctcccgcatatgcggggtctgggaaggggtccca 9607305  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 26573272 - 26573226
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| |||||||| |||||| ||||||||||||| ||||||||||    
T  26573272 ggtgcactaaagctcacgcatacgcagggtccgggatggggtcccac 26573226  T

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Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 46169988 - 46170022
Alignment:
Q  179 aagctcccgcatatgcagggtccgggaaggggtcc 213  Q
    |||||||| ||||||||||||||||||||||||||    
T  46169988 aagctcccacatatgcagggtccgggaaggggtcc 46170022  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 6411834 - 6411879
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||||| ||||||||||||||| ||| |||| ||||||||||||||    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtccca 6411879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 34420656 - 34420701
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| |||||||||| |||| ||| ||||||||||||||||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccac 34420701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 47624253 - 47624208
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaa 206  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||    
T  47624253 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 35418047 - 35418003
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| |||||||| ||||| ||| |||||||||||||||||||||    
T  35418047 tgcactaaagctctcgcatttgcggggtccgggaaggggtcccac 35418003  T

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Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 24145 - 24191
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  24145 ggtgcactagagctcccgcatatgcagggtccgggaaggggtcccac 24191  T

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Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 10932 - 10887
Alignment:
Q  171 gtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccac 10887  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 11261 - 11206
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| || ||||||||||||||||||||||||||||| |||||||    
T  11261 gggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccac 11206  T

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Target: scaffold1176 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 1599 - 1644
Alignment:
Q  170 ggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||||| ||||||||||||||| || ||||||||||||||||||||    
T  1599 ggtgcactaaagctcccgcatacgccgggtccgggaaggggtccca 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 10072 - 10108
Alignment:
Q  180 agctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||||||||||||||||||    
T  10072 agctcctgcatatgcagggtccgggaaggggtcccac 10108  T

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Target: scaffold0187; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 20400 - 20436
Alignment:
Q  180 agctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||| ||||||||||||||||||||||||||||||    
T  20400 agctcctgcatatgcagggtccgggaaggggtcccac 20436  T

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Target: scaffold0258 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 13027 - 13082
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||||||  |||||| |||||| |||||||| |||||||| |||||||||||||||    
T  13027 gggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccac 13082  T

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Target: scaffold0954 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 3672 - 3622
Alignment:
Q  165 aactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtccca 215  Q
    |||| |||||| ||||||| ||||||| ||||||| |||||||||||||||    
T  3672 aactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtccca 3622  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 72870 - 72920
Alignment:
Q  161 gggcaactgggtgcagtaaagctcccgcatatgcagggtccgggaaggggt 211  Q
    |||||||  |||||| ||||||||||||||| ||||| |||||||||||||    
T  72870 gggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggt 72920  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 59100 - 59056
Alignment:
Q  172 tgcagtaaagctcccgcatatgcagggtccgggaaggggtcccac 216  Q
    |||| ||||||||||||||| |||| ||| |||||||||||||||    
T  59100 tgcactaaagctcccgcatacgcagagtctgggaaggggtcccac 59056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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