View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8376_high_3 (Length: 357)

Name: NF8376_high_3
Description: NF8376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8376_high_3
NF8376_high_3
[»] chr7 (52 HSPs)
chr7 (155-340)||(4637801-4637986)
chr7 (155-338)||(4654445-4654627)
chr7 (155-316)||(4644663-4644824)
chr7 (199-340)||(4673653-4673794)
chr7 (1-142)||(20636643-20636785)
chr7 (1-142)||(20638515-20638657)
chr7 (1-153)||(18754404-18754557)
chr7 (1-153)||(2331027-2331179)
chr7 (198-340)||(4711090-4711232)
chr7 (1-142)||(42271357-42271498)
chr7 (1-142)||(24597653-24597795)
chr7 (1-142)||(27869333-27869475)
chr7 (1-143)||(35337660-35337802)
chr7 (1-153)||(48176101-48176253)
chr7 (3-142)||(19195353-19195493)
chr7 (1-99)||(21224490-21224588)
chr7 (1-153)||(3562571-3562723)
chr7 (1-153)||(41452387-41452540)
chr7 (201-340)||(4696190-4696329)
chr7 (1-89)||(10023922-10024010)
chr7 (1-153)||(31493924-31494076)
chr7 (256-339)||(4663644-4663727)
chr7 (3-153)||(17305777-17305928)
chr7 (2-145)||(11843317-11843460)
chr7 (224-340)||(4845044-4845160)
chr7 (1-137)||(21225686-21225821)
chr7 (26-100)||(8526863-8526937)
chr7 (3-153)||(13577926-13578075)
chr7 (8-82)||(44078016-44078090)
chr7 (3-99)||(19919743-19919837)
chr7 (1-99)||(36746641-36746739)
chr7 (1-98)||(10655399-10655495)
chr7 (34-153)||(25002724-25002839)
chr7 (2-153)||(14624621-14624767)
chr7 (8-143)||(24448188-24448319)
chr7 (1-82)||(24464660-24464742)
chr7 (26-82)||(6798077-6798133)
chr7 (55-141)||(39181962-39182047)
chr7 (18-144)||(3403206-3403332)
chr7 (199-289)||(4864926-4865016)
chr7 (8-100)||(3147991-3148083)
chr7 (34-82)||(15681682-15681730)
chr7 (8-82)||(3769489-3769563)
chr7 (1-82)||(4571481-4571563)
chr7 (53-151)||(6650559-6650655)
chr7 (116-153)||(5348277-5348314)
chr7 (108-153)||(19493562-19493607)
chr7 (116-153)||(43517166-43517203)
chr7 (53-100)||(5348127-5348172)
chr7 (117-153)||(25002960-25002996)
chr7 (13-84)||(39296584-39296656)
chr7 (34-82)||(43251349-43251397)
[»] chr1 (33 HSPs)
chr1 (1-153)||(46432354-46432507)
chr1 (1-142)||(51719260-51719400)
chr1 (1-142)||(3616823-3616965)
chr1 (1-139)||(19078063-19078200)
chr1 (1-139)||(19125953-19126090)
chr1 (1-142)||(24961977-24962119)
chr1 (1-138)||(43706792-43706929)
chr1 (1-153)||(24749810-24749964)
chr1 (1-142)||(4059660-4059802)
chr1 (1-153)||(24196274-24196427)
chr1 (1-100)||(48472001-48472100)
chr1 (43-153)||(28920831-28920942)
chr1 (34-97)||(21148048-21148111)
chr1 (2-81)||(27092991-27093070)
chr1 (1-142)||(2425249-2425390)
chr1 (1-98)||(29676148-29676245)
chr1 (52-153)||(10684807-10684907)
chr1 (44-153)||(18606865-18606974)
chr1 (46-100)||(16551827-16551881)
chr1 (1-82)||(47685186-47685267)
chr1 (14-100)||(2657663-2657749)
chr1 (8-87)||(31084757-31084836)
chr1 (108-153)||(2260391-2260436)
chr1 (28-97)||(4455208-4455277)
chr1 (34-97)||(29182172-29182234)
chr1 (56-142)||(22786055-22786141)
chr1 (108-153)||(2657526-2657571)
chr1 (108-153)||(4455055-4455100)
chr1 (108-153)||(16972096-16972141)
chr1 (108-153)||(21148193-21148238)
chr1 (108-153)||(48471876-48471921)
chr1 (108-153)||(50334731-50334776)
chr1 (34-82)||(16971935-16971983)
[»] chr5 (30 HSPs)
chr5 (2-153)||(25557014-25557165)
chr5 (1-139)||(16901135-16901272)
chr5 (2-153)||(16307615-16307768)
chr5 (8-100)||(31055459-31055551)
chr5 (1-153)||(10379296-10379447)
chr5 (2-153)||(38408642-38408793)
chr5 (1-142)||(18695028-18695169)
chr5 (1-142)||(245620-245760)
chr5 (1-100)||(10293225-10293324)
chr5 (1-87)||(23765528-23765614)
chr5 (1-87)||(23815376-23815462)
chr5 (2-153)||(26639176-26639328)
chr5 (2-142)||(19169368-19169508)
chr5 (1-100)||(36641210-36641309)
chr5 (34-146)||(35302086-35302197)
chr5 (51-153)||(31648069-31648171)
chr5 (1-100)||(7187258-7187355)
chr5 (8-153)||(15885310-15885454)
chr5 (29-100)||(8645864-8645935)
chr5 (3-153)||(17704727-17704873)
chr5 (8-87)||(40428784-40428863)
chr5 (9-85)||(7835792-7835867)
chr5 (1-96)||(38476607-38476703)
chr5 (1-82)||(17825635-17825716)
chr5 (28-82)||(41663689-41663743)
chr5 (118-153)||(34125072-34125107)
chr5 (116-153)||(8646003-8646040)
chr5 (1-82)||(23040086-23040170)
chr5 (34-82)||(34125144-34125192)
chr5 (38-98)||(37961424-37961484)
[»] chr3 (38 HSPs)
chr3 (1-148)||(28173867-28174015)
chr3 (1-153)||(23428757-23428910)
chr3 (1-142)||(48907430-48907571)
chr3 (1-153)||(10743422-10743573)
chr3 (1-142)||(26628163-26628305)
chr3 (8-153)||(46673193-46673337)
chr3 (1-142)||(30155283-30155423)
chr3 (1-142)||(13080918-13081060)
chr3 (1-143)||(22500733-22500875)
chr3 (1-142)||(25179602-25179744)
chr3 (1-142)||(27852889-27853031)
chr3 (2-153)||(8542623-8542775)
chr3 (1-100)||(25022801-25022900)
chr3 (1-142)||(4521978-4522120)
chr3 (1-142)||(3328951-3329093)
chr3 (1-142)||(3780907-3781044)
chr3 (1-142)||(8339078-8339220)
chr3 (1-96)||(48860773-48860868)
chr3 (1-142)||(26633497-26633635)
chr3 (26-142)||(22447907-22448024)
chr3 (8-88)||(34878674-34878754)
chr3 (34-98)||(20001778-20001842)
chr3 (1-88)||(28155020-28155107)
chr3 (8-153)||(33279729-33279875)
chr3 (26-153)||(40836342-40836469)
chr3 (8-82)||(9496362-9496436)
chr3 (34-153)||(36311165-36311283)
chr3 (34-100)||(4775918-4775983)
chr3 (1-98)||(26127044-26127139)
chr3 (119-153)||(32315174-32315208)
chr3 (2-100)||(22416399-22416499)
chr3 (53-141)||(32960801-32960889)
chr3 (117-153)||(40836193-40836229)
chr3 (34-85)||(25336437-25336488)
chr3 (13-79)||(34296529-34296596)
chr3 (44-82)||(1743334-1743372)
chr3 (1-98)||(26177094-26177189)
chr3 (1-42)||(6927595-6927636)
[»] chr6 (29 HSPs)
chr6 (1-146)||(8412778-8412924)
chr6 (1-142)||(15298510-15298651)
chr6 (1-142)||(18791382-18791523)
chr6 (1-153)||(22968293-22968444)
chr6 (1-153)||(23819949-23820100)
chr6 (2-142)||(4597544-4597685)
chr6 (1-153)||(24603374-24603527)
chr6 (1-142)||(26710445-26710587)
chr6 (1-142)||(24051033-24051174)
chr6 (8-100)||(34833992-34834084)
chr6 (1-142)||(25819709-25819850)
chr6 (1-142)||(31210818-31210960)
chr6 (8-100)||(3118746-3118838)
chr6 (1-153)||(4013804-4013956)
chr6 (1-142)||(32451750-32451892)
chr6 (8-142)||(32682423-32682556)
chr6 (1-142)||(14572316-14572456)
chr6 (2-88)||(35102630-35102716)
chr6 (3-153)||(22269423-22269570)
chr6 (32-142)||(18749297-18749408)
chr6 (8-100)||(12427298-12427391)
chr6 (1-100)||(4370965-4371064)
chr6 (34-87)||(16415502-16415555)
chr6 (34-138)||(2058993-2059096)
chr6 (108-142)||(8149152-8149186)
chr6 (116-153)||(12291430-12291467)
chr6 (108-153)||(18749110-18749155)
chr6 (3-76)||(18749236-18749309)
chr6 (34-97)||(26240025-26240089)
[»] scaffold0062 (2 HSPs)
scaffold0062 (1-153)||(49672-49825)
scaffold0062 (1-153)||(62211-62364)
[»] chr8 (24 HSPs)
chr8 (1-153)||(4519005-4519158)
chr8 (1-142)||(12723399-12723541)
chr8 (1-142)||(17648267-17648409)
chr8 (1-100)||(19391525-19391624)
chr8 (13-140)||(21666424-21666551)
chr8 (1-142)||(19924289-19924431)
chr8 (1-142)||(30784402-30784544)
chr8 (2-142)||(33895399-33895539)
chr8 (1-142)||(5192409-5192551)
chr8 (1-142)||(8802538-8802679)
chr8 (1-96)||(38630126-38630221)
chr8 (2-100)||(32400461-32400559)
chr8 (8-141)||(44146997-44147130)
chr8 (27-142)||(21929967-21930081)
chr8 (2-143)||(3380222-3380363)
chr8 (1-98)||(4807738-4807836)
chr8 (1-99)||(22452311-22452409)
chr8 (108-153)||(8802413-8802458)
chr8 (108-153)||(18881517-18881562)
chr8 (108-146)||(7116423-7116461)
chr8 (108-153)||(21666287-21666332)
chr8 (53-100)||(1824674-1824719)
chr8 (53-100)||(1859119-1859164)
chr8 (2-100)||(7117253-7117350)
[»] chr2 (24 HSPs)
chr2 (1-153)||(15700760-15700913)
chr2 (1-142)||(25298939-25299080)
chr2 (1-153)||(4587873-4588027)
chr2 (1-153)||(2986699-2986852)
chr2 (1-142)||(38716218-38716359)
chr2 (3-142)||(11175931-11176071)
chr2 (1-142)||(9051165-9051307)
chr2 (8-153)||(9787573-9787718)
chr2 (3-138)||(30714414-30714550)
chr2 (8-142)||(6763862-6763997)
chr2 (1-142)||(15735088-15735230)
chr2 (8-153)||(22191059-22191205)
chr2 (2-142)||(18537967-18538108)
chr2 (35-153)||(36464289-36464404)
chr2 (1-100)||(331779-331879)
chr2 (9-82)||(22387214-22387287)
chr2 (109-153)||(26829332-26829376)
chr2 (2-65)||(17368318-17368381)
chr2 (108-152)||(25884192-25884236)
chr2 (108-153)||(30714288-30714333)
chr2 (113-142)||(32677840-32677869)
chr2 (3-79)||(1020478-1020554)
chr2 (121-153)||(2123636-2123668)
chr2 (117-153)||(25884434-25884470)
[»] chr4 (32 HSPs)
chr4 (3-153)||(25011748-25011899)
chr4 (1-142)||(43793769-43793910)
chr4 (9-142)||(41877172-41877304)
chr4 (1-153)||(55780400-55780552)
chr4 (1-153)||(55844580-55844732)
chr4 (3-142)||(4433323-4433462)
chr4 (8-142)||(35475315-35475448)
chr4 (1-153)||(1588551-1588703)
chr4 (1-153)||(9195802-9195953)
chr4 (1-100)||(13397813-13397912)
chr4 (1-100)||(15058956-15059055)
chr4 (1-142)||(4357276-4357418)
chr4 (1-142)||(5304485-5304625)
chr4 (1-142)||(52838255-52838393)
chr4 (8-142)||(2931345-2931480)
chr4 (1-100)||(13826557-13826655)
chr4 (2-100)||(27018282-27018379)
chr4 (8-153)||(6789103-6789249)
chr4 (1-100)||(41034703-41034802)
chr4 (2-97)||(4098726-4098822)
chr4 (1-100)||(19232481-19232581)
chr4 (3-100)||(9397258-9397356)
chr4 (54-153)||(15734413-15734512)
chr4 (53-100)||(25618786-25618833)
chr4 (14-100)||(45633504-45633590)
chr4 (1-77)||(2715855-2715930)
chr4 (53-146)||(36729247-36729339)
chr4 (34-82)||(51291341-51291389)
chr4 (53-82)||(14804435-14804464)
chr4 (108-153)||(43793644-43793689)
chr4 (108-153)||(45633682-45633727)
chr4 (34-82)||(48158681-48158729)
[»] scaffold0179 (1 HSPs)
scaffold0179 (1-142)||(5787-5929)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-142)||(2187-2327)
[»] scaffold0025 (2 HSPs)
scaffold0025 (2-142)||(61838-61979)
scaffold0025 (1-142)||(19309-19448)
[»] scaffold1202 (1 HSPs)
scaffold1202 (1-100)||(1912-2011)
[»] scaffold0087 (1 HSPs)
scaffold0087 (13-153)||(25114-25255)
[»] scaffold0419 (1 HSPs)
scaffold0419 (2-100)||(3099-3197)
[»] scaffold0267 (1 HSPs)
scaffold0267 (8-100)||(3713-3803)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-142)||(142085-142226)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-87)||(66254-66340)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-87)||(5911-5998)
[»] scaffold0406 (1 HSPs)
scaffold0406 (1-142)||(2021-2157)
[»] scaffold0002 (1 HSPs)
scaffold0002 (36-97)||(455000-455061)
[»] scaffold0683 (1 HSPs)
scaffold0683 (55-139)||(5317-5401)
[»] scaffold0174 (1 HSPs)
scaffold0174 (116-153)||(29941-29978)
[»] scaffold0014 (1 HSPs)
scaffold0014 (108-153)||(112372-112417)
[»] scaffold0007 (1 HSPs)
scaffold0007 (3-48)||(250658-250703)
[»] scaffold0005 (1 HSPs)
scaffold0005 (53-82)||(35263-35292)


Alignment Details
Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 155 - 340
Target Start/End: Complemental strand, 4637986 - 4637801
Alignment:
Q  155 taataaataaatgcaacttctacgtaccattcaaattaatgtatcttcttcactctcttctcacacagatatggcaaactccataaacaaaataacttac 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||    
T  4637986 taataaataaatgcaacttctacgtaccattcaaattaatgtatcttcttcactctcttctcacacagctatggcaaactccataaacaaaaacatttac 4637887  T
Q  255 acaaaaatgagcatactatctctctttttgctattgttccctctagttgctacctcatacaaccctgattacaatttagctatcaa 340  Q
    |||||||| ||||||||||| |||||||||||| | |||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  4637886 acaaaaatcagcatactatccctctttttgctacttttccctttagttgctaactcatacaaccctgattacaatttagccatcaa 4637801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 155 - 338
Target Start/End: Complemental strand, 4654627 - 4654445
Alignment:
Q  155 taataaataaatgcaacttctacgtaccattcaaattaatgtatcttcttcactctcttctcacacagatatggcaaactccataaacaaaataacttac 254  Q
    ||||||||||| ||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||||||||  | ||||    
T  4654627 taataaataaa-gcaacttctacgtaccattcaaattgatctattttcttcacactcttctcacacagatatggcaaactccataaacaaaaacatttac 4654529  T
Q  255 acaaaaatgagcatactatctctctttttgctattgttccctctagttgctacctcatacaaccctgattacaatttagctatc 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  4654528 acaaaaatgagcatactatctctctttttgctattgttccctctaattgcttactcatacaaccctgattacaatttagctatc 4654445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 4644824 - 4644663
Alignment:
Q  155 taataaataaatgcaacttctacgtaccattcaaattaatgtatcttcttcactctcttctcacacagatatggcaaactccataaacaaaataacttac 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| || ||||    
T  4644824 taataaataaatgcaacttctacgtaccattcaaattaatgtatcttcttcactctcttctcacacaactatggcaaacaccataaacaaaaaaaattac 4644725  T
Q  255 acaaaaatgagcatactatctctctttttgctattgttccctctagttgctacctcatacaa 316  Q
    |||||||| |||||||| |||||| |||||||| ||||||||||| | ||||||||||||||    
T  4644724 acaaaaatcagcatactttctctcattttgctactgttccctctactagctacctcatacaa 4644663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 340
Target Start/End: Complemental strand, 4673794 - 4673653
Alignment:
Q  199 cttcttcactctcttctcacacagatatggcaaactccataaacaaaataacttacacaaaaatgagcatactatctctctttttgctattgttccctct 298  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||| | | ||||| | ||| ||||||| |||||||||||    
T  4673794 cttcttcaccctcttctcacacagctatggcaaactccataaacaaaaaaaattacacaaaaatcaccctactaccgctcattttgctcttgttccctct 4673695  T
Q  299 agttgctacctcatacaaccctgattacaatttagctatcaa 340  Q
    |||||||||||||||||| ||   |||||||||||| |||||    
T  4673694 agttgctacctcatacaaaccaatttacaatttagccatcaa 4673653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20636785 - 20636643
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  20636785 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 20636686  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| |||||||||||||||||||||||||||    
T  20636685 ttttttttaatagggggccaaaatcgcaacattttaaaactta 20636643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20638657 - 20638515
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  20638657 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 20638558  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| |||||||||||||||||||||||||||    
T  20638557 ttttttttaatagggggccaaaatcgcaacattttaaaactta 20638515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 18754404 - 18754557
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| || ||| ||||||||    
T  18754404 cgcaacattttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcacttttgcca 18754503  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            |||||||  |||||||||||||||||| ||||||| ||| ||||||    
T  18754504 ttttttttaataggggaccaaaatcgcaacattttgaaacttagggggcgaaaa 18754557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 2331179 - 2331027
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| |  ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  2331179 cgcaactttttgtaaagataaggagtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 2331080  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           |||| || |||||||| ||||||||||||||||||  |||||||||    
T  2331079 tttttttaataaggggccaaaattgcaacattttaaaacttagaggacgaaaa 2331027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 198 - 340
Target Start/End: Original strand, 4711090 - 4711232
Alignment:
Q  198 tcttcttcactctcttctcacacagatatggcaaactccataaacaaaataacttacacaaaaatgagcatactatctctctttttgctattgttccctc 297  Q
    ||||||||||||| || ||||| |  ||||||||||||||||||| ||| |  | |||| ||||| | | |||||||||||| |||||| ||||||||||    
T  4711090 tcttcttcactctattttcacataactatggcaaactccataaacgaaaaatttcacactaaaattaccctactatctctctatttgctcttgttccctc 4711189  T
Q  298 tagttgctacctcatacaaccctgattacaatttagctatcaa 340  Q
    ||||||||| ||||||||||||||||||||||||||| |||||    
T  4711190 tagttgctaactcatacaaccctgattacaatttagccatcaa 4711232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 42271498 - 42271357
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||| |||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  42271498 cgcaactttttgtaaacataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 42271399  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||  ||||||||||||||||||| |||||||    
T  42271398 tttttttaataggaggccaaaatcgcaacattttgaaactta 42271357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 24597653 - 24597795
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||||| || || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||| | ||||||||    
T  24597653 cgcaactttttgtaaagagaaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggttacttttgcca 24597752  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| | |||||||||||||||||||||||||    
T  24597753 ttttttttaatagggggacaaaatcgcaacattttaaaactta 24597795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27869333 - 27869475
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  27869333 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 27869432  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            |||||||  |||||||||||||||||| |||||||    
T  27869433 ttttttttaatagggctccaaaatcgcaacattttgaaactta 27869475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35337660 - 35337802
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  35337660 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 35337759  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaa 143  Q
           ||||| |  ||||||||| |||||||| ||||||||    
T  35337760 tttttttaatagaggaccaaaatcgtaacattttgaaacttaa 35337802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 48176101 - 48176253
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| | ||||||||||||| |||||||||||||||||||| || | ||||||||    
T  48176101 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacatagggagttacttttgcca 48176199  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| ||||||||||||||||||| ||||||| ||| ||||||    
T  48176200 ttttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaa 48176253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 19195353 - 19195493
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-n 101  Q
    |||| |||||||||||||| || ||||||||||||||||| |||||| ||| |||||||||||  |||||||||||||||||||||||| ||||||||      
T  19195353 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcacttttgccatt 19195452  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
          ||||||| | |||||| ||||||||||||||||||    
T  19195453 ttttttaatagggggtcaaaattgcaacattttaaaactta 19195493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21224490 - 21224588
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  21224490 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcc 21224588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 3562571 - 3562723
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  3562571 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 3562669  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| |||||||||| |||||||| |||||||  |||||||||    
T  3562670 ttttttttaatagggggccaaaatcgtaacattttgaaacttagaggacgaaaa 3562723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 41452387 - 41452540
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  41452387 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcacttttgcca 41452486  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| ||||||||  ||||||||| |||||||  |||||||||    
T  41452487 ttttttttaatagggggccaaaattacaacattttgaaacttagaggacgaaaa 41452540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 201 - 340
Target Start/End: Original strand, 4696190 - 4696329
Alignment:
Q  201 tcttcactctcttctcacacagatatggcaaactccataaacaaaataacttacacaaaaatgagcatactatctctctttttgctattgttccctctag 300  Q
    ||||||||||||| ||| | |  |||||||||||||| |||||||| |  | |||| ||||| | | | ||||||||| |||||||||||||||||||||    
T  4696190 tcttcactctcttatcagagaactatggcaaactccagaaacaaaaaatttcacactaaaatcatcctgctatctctcattttgctattgttccctctag 4696289  T
Q  301 ttgctacctcatacaaccctgattacaatttagctatcaa 340  Q
    |||||||||||||| |||||  |||||||||||| |||||    
T  4696290 ttgctacctcatacgaccctatttacaatttagccatcaa 4696329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10023922 - 10024010
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggt 89  Q
    |||||| |||||||||||||| || |||||||| |||||| | |||||| ||||||||||||||| |||||||||||||||||||||||    
T  10023922 cgcaactttttgtaaagataaggggtcaaaaaaaatattttccttatgtaagggggtcaaaagagcatatttccctaaacatagggggt 10024010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 31494076 - 31493924
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||| | |||||| || |||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  31494076 cgcaactttttgtaaagataaggggtcaaaaagcatattttccttatgttagagggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 31493978  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| |||||||||| |||||||| ||||||| ||| ||||||    
T  31493977 tttttgttaatagggggccaaaatcgtaacattttgaaacttaggggccgaaaa 31493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 4663727 - 4663644
Alignment:
Q  256 caaaaatgagcatactatctctctttttgctattgttccctctagttgctacctcatacaaccctgattacaatttagctatca 339  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||   |||||||||||| ||||    
T  4663727 caaaaatcagcatactatctctcattttgctattgttccctctaattgctacctcatacaacccaatttacaatttagccatca 4663644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 17305928 - 17305777
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-- 100  Q
    |||| ||||||||| |||| || ||||||| ||||||||| |||||| ||| ||||||||||| |||||| |||||||||| ||||||| ||||||||      
T  17305928 caactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacata-ggggtcacttttgccatt 17305830  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           ||||||| ||||||||||||||||||| |||||||  |||||||||    
T  17305829 tttttttaatagggggccaaaatcgcaacattttgaaacttagaggacgaaaa 17305777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 145
Target Start/End: Original strand, 11843317 - 11843460
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca- 100  Q
    ||||| |||||||| ||||| || ||||||| ||||||| | |||||| ||||| ||||||||| ||||||||||||||||||| ||||| ||||||||     
T  11843317 gcaactttttgtaaggataaggggtcaaaaagcatattttccttatgttagggg-tcaaaagagcatatttccctaaacataggaggtcacttttgccat 11843415  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagg 145  Q
           ||||||| | ||||||||||||||||| ||||||||||    
T  11843416 tttttttaatagggggtcaaaatcgcaacattttgaaacttaagg 11843460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 4845044 - 4845160
Alignment:
Q  224 tatggcaaactccataaacaaaataacttacacaaaaatgagcatactatctctctttttgctattgttccctctagttgctacctcatacaaccctgat 323  Q
    |||| |||||||||||||||||| |  | |||| ||||| | | |||||||| ||| |||| | |||||||||||||||  || ||||||||||||||||    
T  4845044 tatgccaaactccataaacaaaaaatttcacactaaaatcaccctactatctatctatttggttttgttccctctagttattaactcatacaaccctgat 4845143  T
Q  324 tacaatttagctatcaa 340  Q
    ||||||||||| |||||    
T  4845144 tacaatttagccatcaa 4845160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 21225686 - 21225821
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||  | || ||||| | ||||||||| |||||| ||||| ||||||||| |||||||||||||||||| |||||  ||||||||    
T  21225686 cgcaactttttgtaaagacgaggggtcaaatagcatatttcccttatgttagggg-tcaaaagagcatatttccctaaacatagagggtcgcttttgcca 21225784  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaa 137  Q
           ||||| |||| |||||||||||||||||||    
T  21225785 ttgttttaatagagagctaaaatcgcaacattttaaa 21225821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 8526937 - 8526863
Alignment:
Q  26 tcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||| ||||||||| |||||| ||| ||||||| ||| |||||| |||||||||||||||||||||||||||    
T  8526937 tcaaaaagcatatttcccttatgttaggaggtcaaatgagcatattttcctaaacatagggggtcatttttgcca 8526863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 13577926 - 13578075
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-n 101  Q
    |||| ||||||| ||||||||| ||||||| ||||||||| |||||| ||||| ||||||||| |||||||| |||||||| ||||||| ||||||||      
T  13577926 caactttttgtatagataaagggtcaaaaagcatatttcccttatgttagggg-tcaaaagagcatatttccttaaacata-ggggtcacttttgccatt 13578023  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
          ||||| | | ||||||||||||||||| ||||||| ||| ||||||    
T  13578024 ttttttaatagagggtcaaaatcgcaacattttgaaacttagggggcgaaaa 13578075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 44078016 - 44078090
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||||||||||||| || ||||||||||||||||  |||||| ||| ||||||||||| ||||||||||||||||    
T  44078016 ttttgtaaagataaggggtcaaaaaacatatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 44078090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 19919743 - 19919837
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||| |||||||||||||| || ||||||||||||||| | |||||| ||| ||||||||||| |||||| ||||||||| |||||||| |||||||    
T  19919743 caactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatattt-cctaaacat-gggggtcacttttgcc 19919837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 36746641 - 36746739
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||||| |||||||||||||| || | ||||  ||||||||  |||||| ||| ||||||||||| |||||||||||||||||| |||| | |||||||    
T  36746641 cgcaactttttgtaaagataaggggttaaaaggcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagtgggttacttttgcc 36746739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10655495 - 10655399
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgc 98  Q
    |||||| |||||||||||||| || | |||||| |||||||  |||| | ||||| | ||||||| ||||||||||||||||||||| ||||||||||    
T  10655495 cgcaactttttgtaaagataaggggttaaaaaa-atatttctcttatattaggggattaaaagagcatatttccctaaacataggggatcatttttgc 10655399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 25002839 - 25002724
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattt 133  Q
    ||||||||| |||||| ||||| ||||||||| || |||||||||||||  ||||||||||||||||       ||||||| ||||||||| ||||||||    
T  25002839 catatttcctttatgttagggg-tcaaaagagcatgtttccctaaacat--ggggtcatttttgccatttatttaataggg-gccaaaatcacaacattt 25002744  T
Q  134 taaaacttaagggacgaaaa 153  Q
    | ||||||| || |||||||    
T  25002743 tgaaacttagggcacgaaaa 25002724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 14624767 - 14624621
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccan 101  Q
    ||||| ||||||||||||||||| |||||||  |||||||| |||||| |  |||||||||||| |||||| |||||||||   |||| | ||||||||     
T  14624767 gcaactttttgtaaagataaagggtcaaaaagtatatttcccttatgtta-tgggtcaaaagagcatattttcctaaacat--tgggttacttttgcca- 14624672  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
          ||||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  14624671 ttttttaataggg-gccaaaatcgcaatattttgaaacttaggggacgaaaa 14624621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 24448188 - 24448319
Alignment:
Q  8 ttttgtaaagataaaggatca-aaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnn 106  Q
    |||||||||||||| || ||| |||||||||||||| |||||| |||||||||||| || |||||||||   ||||  || || ||||||||||          
T  24448188 ttttgtaaagataaggggtcataaaaacatatttcccttatgttagggggtcaaaaaagcatatttccc---acat--ggtgttatttttgccatttttt 24448282  T
Q  107 naatagggagccaaaatcgcaacattttaaaacttaa 143  Q
     |||| || | ||||||||||||||||||||||||||    
T  24448283 taataaggggtcaaaatcgcaacattttaaaacttaa 24448319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24464742 - 24464660
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||||||  ||||||| || |||||| | ||||||||| |||||| ||||||||||||||  ||||||||||||||||    
T  24464742 cgcaacattttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacat 24464660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 6798077 - 6798133
Alignment:
Q  26 tcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||| ||||||||| |||||| || |||||||||||| ||||||||||||||||    
T  6798077 tcaaaaatcatatttcccttatgttagagggtcaaaagagcatatttccctaaacat 6798133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 39182047 - 39181962
Alignment:
Q  55 ggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnnnaatagggagccaaaatcgcaacattttaaaactt 141  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||        ||||||  ||||||||||||||||||||||||||    
T  39182047 ggtcaaaagagcatatttccctaaacat--ggggtcatttttgccattttttttaataggaggccaaaatcgcaacattttaaaactt 39181962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 3403206 - 3403332
Alignment:
Q  18 ataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggag 116  Q
    |||| ||||||||| | ||||||||| |||||| ||||||||||||||| |||||| |||| ||||  ||||||| ||||| ||        |||||| |    
T  3403206 ataagggatcaaaagatcatatttcccttatgttagggggtcaaaagagcatattttcctatacatgaggggtcacttttgtcattttttttataggggg 3403305  T
Q  117 ccaaaatcgcaacattttaaaacttaag 144  Q
     |||||||||||| ||||||||||||||    
T  3403306 tcaaaatcgcaac-ttttaaaacttaag 3403332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 289
Target Start/End: Complemental strand, 4865016 - 4864926
Alignment:
Q  199 cttcttcactctcttctcacacagatatggcaaactccataaacaaaataacttacacaaaaatgagcatactatctctctttttgctatt 289  Q
    ||||||||| |||||||||||||  |||||||||||| |||||||| | |  |||||| ||||| | | ||||||||||| |||| |||||    
T  4865016 cttcttcaccctcttctcacacaactatggcaaactcgataaacaagaaactttacactaaaatcaccctactatctctccttttcctatt 4864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 3148083 - 3147991
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||||||| |||||| |||||  | |||||||||||||| | ||||| ||||||||| |||| ||||||||||| |||| | ||||||||||    
T  3148083 ttttgtaaagttaaagggtcaaaggagcatatttccattattttaggggatcaaaagagcatatatccctaaacat-ggggataatttttgcca 3147991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 15681730 - 15681682
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||| |||| |||||| ||||||||||||||| ||||||||||||||||    
T  15681730 catagttcccttatgttagggggtcaaaagagcatatttccctaaacat 15681682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 3769563 - 3769489
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||||||||  ||||||||| ||||||||   ||||| | |||||||||| || ||||||| ||||||||    
T  3769563 ttttgtaaagataagagatcaaaaagcatatttctcatatgttaaggggtcaaaaaagcatatttctctaaacat 3769489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4571481 - 4571563
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||||| |||||  ||||||| || |||||| | ||||||||| |||||| | ||||| ||||||| ||||||||||||||||    
T  4571481 cgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaacat 4571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 151
Target Start/End: Complemental strand, 6650655 - 6650559
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaa 151  Q
    ||||||||||||| ||||||||||||| ||  ||||||  ||||||||       |||| || ||||||||||||| ||||||||||||| ||| ||||    
T  6650655 ggggtcaaaagagcatatttccctaaatat--ggggtcccttttgccatttttttaataaggggccaaaatcgcaaaattttaaaacttagggggcgaa 6650559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 5348277 - 5348314
Alignment:
Q  116 gccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  5348277 gccaaaatcacaacattttaaaacttaggggacgaaaa 5348314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 19493562 - 19493607
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| | |||||||||||||||||||||||||| || ||||||    
T  19493562 aatagggggtcaaaatcgcaacattttaaaacttaaagggcgaaaa 19493607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 43517166 - 43517203
Alignment:
Q  116 gccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||||||||||||||||||||||  |||||||||    
T  43517166 gccaaaatcgcaacattttaaaacttagtggacgaaaa 43517203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 5348172 - 5348127
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||||||||| |||||| ||||||||||  |||||||||||||||    
T  5348172 ggggtcaaaagagcatattttcctaaacata--gggtcatttttgcca 5348127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 25002960 - 25002996
Alignment:
Q  117 ccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  25002960 ccaaaatcgcaacattttaaaacttagggggcgaaaa 25002996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 39296656 - 39296584
Alignment:
Q  13 taaagataaaggatcaaaaaac-atatttccattatgtcagggggtcaaaagagtatatttccctaaacatag 84  Q
    |||||||||||||| |||| |  |||||||||| | || || |||||||||||| ||||||||||||| ||||    
T  39296656 taaagataaaggattaaaagagtatatttccataaagttagagggtcaaaagagcatatttccctaaagatag 39296584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 43251397 - 43251349
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||| |||||| || |||||||||||||| |||| |||||||||    
T  43251397 catatttcccttatgttagagggtcaaaagagtacattttcctaaacat 43251349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 46432354 - 46432507
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  46432354 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 46432453  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  46432454 ttttttttaatagggggccaaaatcgcaacattttgaaacttaaggggcgaaaa 46432507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 51719260 - 51719400
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || | ||||||||||||| | |||||| ||||| ||||||||| ||||||||||||||||| ||||||| ||||||||    
T  51719260 cgcaactttttgtaaagataaggggt-aaaaaacatattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcacttttgcca 51719358  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||||||||||||||||||||||| |||||||    
T  51719359 tttttttaatagggagccaaaatcgcaacattttgaaactta 51719400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 3616965 - 3616823
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| | | ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  3616965 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtgaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 3616866  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||||||||||||| |||||||    
T  3616865 ttttttttaatagggggccaaaatcgcaacattttgaaactta 3616823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 19078063 - 19078200
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  19078063 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 19078161  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaac 139  Q
           ||||||| |||||||| |||||||||| ||||    
T  19078162 tttttttaatagggggccaaaattgcaacattttgaaac 19078200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 19125953 - 19126090
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  19125953 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 19126051  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaac 139  Q
           ||||||| |||||||| |||||||||| ||||    
T  19126052 tttttttaatagggggccaaaattgcaacattttgaaac 19126090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24962119 - 24961977
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  24962119 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24962020  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||| ||||||||| |||||||    
T  24962019 ttttttttaatagggggccaaaatcacaacattttgaaactta 24961977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 43706792 - 43706929
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  43706792 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcacttttgcca 43706890  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaa 138  Q
            ||||||| |||||||||||||||||||||||    
T  43706891 ttttttttaatagggggccaaaatcgcaacattttaaaa 43706929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 24749964 - 24749810
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  24749964 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24749865  T
Q  101 --nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
             ||||| | ||||||||||||||||||| |||||||  |||||||||    
T  24749864 tttttttttaatagtgggccaaaatcgcaacattttgaaacttagaggacgaaaa 24749810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 4059660 - 4059802
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||| | |||||| ||| ||||||||||| |||||||||||||||||| |||||| ||||||||    
T  4059660 cgcaactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgcca 4059759  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| || |||||||||||||||| |||||||    
T  4059760 ttttttttaatagggggctaaaatcgcaacattttgaaactta 4059802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 24196427 - 24196274
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||| ||||||||| ||||||| ||||||||    
T  24196427 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacatatggggtcacttttgcca 24196328  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||| | ||||||||||||||||||| ||||||| ||| ||||||    
T  24196327 ttttttttaatagagggccaaaatcgcaacattttgaaacttagggggcgaaaa 24196274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48472001 - 48472100
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||  |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  48472001 cgcaactttttgtaaagataaggggtcaaaaagcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcaattttgcca 48472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 28920831 - 28920942
Alignment:
Q  43 attatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnnnaatagggagccaaaatcgcaacattttaaaactt 141  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||        ||||||| ||||||||||||||||||| ||||||    
T  28920831 attatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactt 28920930  T
Q  142 aagggacgaaaa 153  Q
    | ||| ||||||    
T  28920931 agggggcgaaaa 28920942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 21148111 - 21148048
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttg 97  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  21148111 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg 21148048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 27092991 - 27093070
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaaca 81  Q
    ||||| |||||||||||||| || ||||||||||||||||   ||| | ||||||||||||||| |||||||||||||||    
T  27092991 gcaactttttgtaaagataaggggtcaaaaaacatatttcacatatattagggggtcaaaagagcatatttccctaaaca 27093070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 2425390 - 2425249
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||||| |||||||||||||| || | |||||| ||||||||| |||||| || |||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  2425390 cgcaactttttgtaaagataagggttaaaaaaaacatatttcccttatgttagagggtcaaaagagcata-ttccctaaacata-ggggtcacttttgcc 2425293  T
Q  100 a-nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
    |        ||||||| | ||||||||||||||||| |||||||    
T  2425292 attttttttaatagggggtcaaaatcgcaacattttgaaactta 2425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29676245 - 29676148
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgc 98  Q
    |||||| |||| ||||||||| || ||||||| ||||||||  |||||| ||| | ||| ||||| ||||||||||||||||||||| ||| ||||||    
T  29676245 cgcaactttttataaagataaggggtcaaaaagcatatttcacttatgttaggagatcacaagagcatatttccctaaacataggggatcacttttgc 29676148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 10684907 - 10684807
Alignment:
Q  52 gggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaa 151  Q
    ||||||||| |||||||||||||||||||| | ||||||| ||||||||       |||||||  | ||||| |||||||||||||||||||||| ||||    
T  10684907 gggggtcaatagagtatatttccctaaaca-atggggtcacttttgccatttttttaataggggactaaaattgcaacattttaaaacttaaggggcgaa 10684809  T
Q  152 aa 153  Q
    ||    
T  10684808 aa 10684807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 18606865 - 18606974
Alignment:
Q  44 ttatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattttaaaacttaa 143  Q
    |||||| | ||||||||||||| ||||||||||||||||  ||||||| |||| |||       ||||||| | ||||||| |||||||||||||||||     
T  18606865 ttatgttatggggtcaaaagagcatatttccctaaacatgaggggtcactttttccagttttttaatagggggtcaaaatcacaacattttaaaacttag 18606964  T
Q  144 gggacgaaaa 153  Q
    ||| ||||||    
T  18606965 gggtcgaaaa 18606974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 16551827 - 16551881
Alignment:
Q  46 atgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  16551827 atgttagggggtcaaaagagcatatttccctaaacattgggggtcacttttgcca 16551881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47685267 - 47685186
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||||| |||||||||| ||| || ||||||||||||||| | |||||| ||||| |||||| || |||||||| |||||||    
T  47685267 cgcaactttttgtaaaggtaaggggtcaaaaaacatattttccttatgttaggggatcaaaatagcatatttccttaaacat 47685186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 2657663 - 2657749
Alignment:
Q  14 aaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||||| || |||||| | ||||||||| |||||| ||| |||||| |||| |||||||||||||||||||| |||| ||||||||    
T  2657663 aaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagggagtcacttttgcca 2657749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 31084757 - 31084836
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggg 87  Q
    |||||||||||||| || ||||||| ||||||| |  ||||| |||||||||||| | ||||||||| |||| |||||||    
T  31084757 ttttgtaaagataaggggtcaaaaagcatattttccatatgttagggggtcaaaatattatatttccataaaaatagggg 31084836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 2260436 - 2260391
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||    
T  2260436 aataaggaaccaaaatcgcaacattttaaaacttaagggtcgaaaa 2260391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 4455208 - 4455277
Alignment:
Q  28 aaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttg 97  Q
    ||||| ||||||||| |||||| | ||||||||||||| |||||| ||||||||| |||| ||| |||||    
T  4455208 aaaaatcatatttcccttatgttacggggtcaaaagagcatattttcctaaacattggggatcacttttg 4455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 29182172 - 29182234
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttg 97  Q
    ||||||||| |||||| ||||| ||||||||| ||||||| ||||||||| ||||||| |||||    
T  29182172 catatttcccttatgttagggg-tcaaaagagcatatttctctaaacataaggggtcacttttg 29182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 142
Target Start/End: Complemental strand, 22786141 - 22786055
Alignment:
Q  56 gtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
    |||||||||| |||||||||||||||| |||| ||| ||||||||        ||||||| | |||||||||||||||||||||||||    
T  22786141 gtcaaaagagcatatttccctaaacatgggggctcacttttgccattttttttaataggg-gtcaaaatcgcaacattttaaaactta 22786055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 2657571 - 2657526
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| || ||||||||||||||||||||||||| || ||||||    
T  2657571 aatagggggctaaaatcgcaacattttaaaacttaaagggcgaaaa 2657526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 4455100 - 4455055
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||| ||||| |||||||||||||||||||||||| ||| ||||||    
T  4455100 aataaggagctaaaatcgcaacattttaaaacttaggggtcgaaaa 4455055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 16972096 - 16972141
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| || |||||||||||||||||||||||| ||| ||||||    
T  16972096 aatagggggctaaaatcgcaacattttaaaacttagggggcgaaaa 16972141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 21148193 - 21148238
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| ||||||||||||||||||||||| ||| ||| ||||||    
T  21148193 aatagggggccaaaatcgcaacattttaaaatttaggggtcgaaaa 21148238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 48471921 - 48471876
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| ||||||||||||||||||| |||| || ||||||||||    
T  48471921 aatagggggccaaaatcgcaacattttgaaacataggggacgaaaa 48471876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 50334776 - 50334731
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| |||||||| |||||||||||||||||| ||| ||||||    
T  50334776 aatagggggccaaaattgcaacattttaaaacttagggggcgaaaa 50334731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 16971983 - 16971935
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||| |||||| |||||||| |||||| |||| |||||||||||    
T  16971983 catatttcccttatgttagggggtctaaagagcatatatccctaaacat 16971935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 25557014 - 25557165
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccan 101  Q
    ||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||     
T  25557014 gcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccat 25557113  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
          ||||||| | ||||||||||||||||| ||||||| ||| ||||||    
T  25557114 ttttttaatagggggtcaaaatcgcaacattttgaaacttagggggcgaaaa 25557165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 16901135 - 16901272
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  16901135 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 16901233  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaac 139  Q
           ||||||| | ||||||||||||||||| ||||    
T  16901234 tttttttaatagggggtcaaaatcgcaacattttgaaac 16901272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 16307615 - 16307768
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggg-gtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||| |||||||||||||| |  ||||||||||||||| | |||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||| |    
T  16307615 gcaactttttgtaaagataaggagtcaaaaaacatattttccttatgttaggggggtcaaaagagcatatttccctaaacatagggggtcacttttgcaa 16307714  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            |||||||||| ||||||||||||||||||||||||| || ||||||    
T  16307715 ttttttttaatagggagctaaaatcgcaacattttaaaacttaaagggcgaaaa 16307768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 31055459 - 31055551
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||||||||||| || ||||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  31055459 ttttgtaaagataaggggtcaaaaaacatatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 31055551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 10379447 - 10379296
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| | ||||||||||||| |||||| |||||||||||| ||||| |||||| |    
T  10379447 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-ggggtcaaaagagcatattttcctaaacataggaggtcacttttgcta 10379349  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           |||| || |||||||| | |||||||||||||||| ||||||||||    
T  10379348 tttttttaataaggggccaaaattgtaacattttaaaacttaggggacgaaaa 10379296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 38408793 - 38408642
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca- 100  Q
    ||||| |||||||||||||| || ||||||||||||||||| |||||| || || ||||||||| ||||||| ||||||||||||||||| ||||||||     
T  38408793 gcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagtgg-tcaaaagagcatatttctctaaacatagggggtcacttttgccat 38408695  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           ||||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  38408694 tttttttaatagggggccaaaatcgcaatattttgaaacttaggggacgaaaa 38408642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 18695169 - 18695028
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  18695169 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 18695071  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| | |||||||||||||||||||||||||    
T  18695070 ttttttttaatagggggtcaaaatcgcaacattttaaaactta 18695028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 245760 - 245620
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  245760 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 245662  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| |||||||| |||| ||||| |||||||    
T  245661 tttttttaatagggggccaaaattgcaatattttgaaactta 245620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 10293225 - 10293324
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||| |||||||| |  ||||||||||||||||| |||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10293225 cgcaactttttggaaagataaggagtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttcccaaaacatagggggtcatttttgcca 10293324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23765528 - 23765614
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggg 87  Q
    |||||| ||||||||||||||| ||||||||| ||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||    
T  23765528 cgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggg 23765614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23815376 - 23815462
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggg 87  Q
    |||||| ||||||||||||||| ||||||||| ||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||    
T  23815376 cgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggg 23815462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 26639176 - 26639328
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca- 100  Q
    ||||| |||||||||||||| || ||||||  ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||     
T  26639176 gcaactttttgtaaagataaggggtcaaaacgcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccat 26639275  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           || ||||  |||||||||||||||||| |||||||  |||||||||    
T  26639276 tttttttaacaggggaccaaaatcgcaacattttgaaacttagaggacgaaaa 26639328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 19169508 - 19169368
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccan 101  Q
    ||||| |||||||||||||| || ||||||| ||||||||| |||||| | | ||||||| ||| |||||| |||||||||||||| ||| ||||||||     
T  19169508 gcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaagaggtcaaatgagcatattttcctaaacataggggatcacttttgccat 19169409  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
          ||||| || ||||||| | ||||||||||||||||    
T  19169408 ttttttaatagagaaccaaaattgtaacattttaaaactta 19169368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 36641309 - 36641210
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||| ||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||| ||||||||||||| ||| ||||||||    
T  36641309 cgcaactttttataaagataacgggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacataggggctcacttttgcca 36641210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 35302086 - 35302197
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattt 133  Q
    ||||||| |||||||| ||||||||||||||| ||||||||||||| || |||||||| ||||||||       ||||| | | ||||||||||||||||    
T  35302086 catatttacattatgttagggggtcaaaagagcatatttccctaaatat-gggggtcacttttgccatttttataatagagggtcaaaatcgcaacattt 35302184  T
Q  134 taaaacttaaggg 146  Q
    | |||||||||||    
T  35302185 tgaaacttaaggg 35302197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 31648171 - 31648069
Alignment:
Q  51 agggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacga 150  Q
    |||||||||||| || ||||||||||||||||| ||||||| ||||||||       ||||||| || |||||||||||||||| ||| ||| |||||||    
T  31648171 agggggtcaaaaaagcatatttccctaaacataaggggtcacttttgccatttttttaatagggggcgaaaatcgcaacattttgaaatttatgggacga 31648072  T
Q  151 aaa 153  Q
    |||    
T  31648071 aaa 31648069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7187355 - 7187258
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||| ||||  | ||| ||||||||||||| |||||| || ||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  7187355 cgcaactttttgtaaaaataattggtcataaaacatatttcccttatgttagagggtcaaaagaatatatttccctaaacat--ggggtcaattttgcca 7187258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 15885310 - 15885454
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnn 107  Q
    |||||||||||||| || |||| |||||||||||| |||||| | | ||||||||||| |||||||| ||||||||  ||| |||||||||||           
T  15885310 ttttgtaaagataaggg-tcaacaaacatatttcccttatgttaagaggtcaaaagagaatatttccataaacataaagggacatttttgccattttttt 15885408  T
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||| ||  ||||||| |||||||||| ||||||| ||||| ||||    
T  15885409 aataagggaccaaaatagcaacattttgaaacttaggggacaaaaa 15885454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 8645935 - 8645864
Alignment:
Q  29 aaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||| ||||||||| |||||| ||| ||||||||||| |||||||||||||||| |||||||| ||||||||    
T  8645935 aaaatcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttgcca 8645864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 153
Target Start/End: Original strand, 17704727 - 17704873
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccann 102  Q
    |||| ||||||||||||||||| |||||||  |||||||| |||||| |  |||||||||||| |||||| |||||||||   |||| | |||||| |      
T  17704727 caactttttgtaaagataaagggtcaaaaagtatatttcccttatgtta-tgggtcaaaagagcatattttcctaaacat---gggttacttttgctatt 17704822  T
Q  103 nnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
         ||||||| ||||||||||||| ||||| ||||||| ||||||||||    
T  17704823 tttttaatagggggccaaaatcgcaatattttgaaacttaggggacgaaaa 17704873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 40428784 - 40428863
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggg 87  Q
    |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||  ||||||||||||||| |||||    
T  40428784 ttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagaacatatttccctaaacacagggg 40428863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 7835867 - 7835792
Alignment:
Q  9 tttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagg 85  Q
    ||||||||||||| || ||||||||||||||| | |||||| | ||| ||||||||| |||||||||||||||||||    
T  7835867 tttgtaaagataaggggtcaaaaaacatattttccttatgttatggg-tcaaaagagcatatttccctaaacatagg 7835792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38476607 - 38476703
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcattttt 96  Q
    |||||| |||||  ||||||| || |||||| | ||||||||| |||||| | ||||||||||||| ||||||||||||| ||||||||||| ||||    
T  38476607 cgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtcaaaagagcatatttccctaaatatagggggtcactttt 38476703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17825635 - 17825716
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaa-aacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||||| |||||  |||||||||| |||||| ||||||||||  |||||| ||||| ||||||||| ||||||||||||||||    
T  17825635 cgcaactttttgacaagataaagggtcaaaagaacatatttctcttatgttagggg-tcaaaagagcatatttccctaaacat 17825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 41663689 - 41663743
Alignment:
Q  28 aaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||| ||||||||| |||||| | ||||||||||||| ||||||||||||||||    
T  41663689 aaaaatcatatttcccttatgttatggggtcaaaagagcatatttccctaaacat 41663743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 34125107 - 34125072
Alignment:
Q  118 caaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||||||||||||||||||||||| ||||||||    
T  34125107 caaaatcgcaacattttaaaacttaagagacgaaaa 34125072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 8646003 - 8646040
Alignment:
Q  116 gccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  8646003 gccaaaatcgcaacattttaaaacataaggggcgaaaa 8646040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23040086 - 23040170
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggg--gtcaaaagagtatatttccctaaacat 82  Q
    |||||| |||||  ||||||| || |||||| | ||||||||| |||||| |||||  |||||||||| ||||||||||||||||    
T  23040086 cgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtcaaaagagcatatttccctaaacat 23040170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 34125192 - 34125144
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||| | |||||| ||||| ||||||||| ||||||||||||||||    
T  34125192 catattttccttatgttaggggatcaaaagagcatatttccctaaacat 34125144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 37961424 - 37961484
Alignment:
Q  38 tttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgc 98  Q
    ||||| |||||| ||| |||||||||||  ||||||||||||||| |||| ||| ||||||    
T  37961424 tttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgggggatcacttttgc 37961484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 28173867 - 28174015
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||    
T  28173867 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagaggatcatttttgcca 28173966  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggac 148  Q
            ||||||| ||||||||||||||||||| |||||||||||||    
T  28173967 ttttttttaatagggggccaaaatcgcaacattttgaaacttaagggac 28174015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 23428757 - 23428910
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  23428757 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 23428856  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| |||||||| | |||||||| ||||||| ||| ||||||    
T  23428857 ttttttttaatagggggccaaaattgtaacattttgaaacttagggggcgaaaa 23428910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 48907430 - 48907571
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||| ||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  48907430 cgcaactttttttaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 48907529  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| ||||||||||||||||||| |||||||    
T  48907530 tttttttaatagggggccaaaatcgcaacattttgaaactta 48907571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 10743573 - 10743422
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| | ||||| ||||||| |||||||||||||||||||| |||| ||||| ||    
T  10743573 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-ggggttaaaagagcatatttccctaaacatagggagtcacttttgtca 10743475  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           ||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  10743474 tttttttaatagggggccaaaatcgcaacattttaaaacttagggggcgaaaa 10743422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26628163 - 26628305
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  26628163 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 26628262  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||||||||||||| |||||||    
T  26628263 ttttttttaatagggggccaaaatcgcaacattttgaaactta 26628305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 46673193 - 46673337
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnn 107  Q
    |||||||||||||| || |||||| |||||||||| |||||| |||| |||||||||| ||||||||||||||||||||| ||| ||||||||           
T  46673193 ttttgtaaagataaggggtcaaaa-acatatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgccattttttt 46673291  T
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| | |||||||||||||||| |||||||||||| ||||||    
T  46673292 aatagggggtcaaaatcgcaacatttgaaaacttaaggggcgaaaa 46673337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 30155283 - 30155423
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  30155283 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgcca 30155382  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           |||||||   |||||||||||||||||||||||||    
T  30155383 -ttttttaataggggatcaaaatcgcaacattttaaaactta 30155423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 13081060 - 13080918
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| | | ||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  13081060 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcacttttgcca 13080961  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||||||||||||||||||||||| |||||||    
T  13080960 ttttttttaatagggagccaaaatcgcaacattttgaaactta 13080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22500733 - 22500875
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||| |||| |||||||||| ||||||||| |||||| ||| ||||||||||| |||||| |||||||||||||||||| ||||||||    
T  22500733 cgcaactttttgtaaatataagggatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgcca 22500832  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaa 143  Q
           ||||||| | |||||| |||||||||||||| ||||    
T  22500833 tttttttaatagggggtcaaaattgcaacattttaaaatttaa 22500875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 25179744 - 25179602
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||  ||| || ||| ||||||||||| ||||||||||||||||||||||||| |||||| |    
T  25179744 cgcaactttttgtaaagataaggggtcaaaaaacatatttctcttacgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcta 25179645  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| |||||||||||||||||||||||||||    
T  25179644 ttttttttaatagggggccaaaatcgcaacattttaaaactta 25179602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27852889 - 27853031
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  27852889 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 27852988  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| |||||||| |||||||||| |||||||    
T  27852989 ttttttttaatagggggccaaaattgcaacattttgaaactta 27853031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 8542775 - 8542623
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca- 100  Q
    ||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||     
T  8542775 gcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccat 8542676  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           ||||||| | |||||| |||||||||| |||||||  |||||||||    
T  8542675 tttttttaatagggggtcaaaattgcaacattttgaaacttagaggacgaaaa 8542623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 25022801 - 25022900
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||| ||| |||||| | ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  25022801 cgcaactttttgtaaagataagggttcaaaaaacatatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 25022900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4522120 - 4521978
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| | | ||||||||||| ||||||||||||||||| ||||||| |||||| |    
T  4522120 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcacttttgcta 4522021  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| |||||||||||||||||||||||||||    
T  4522020 ctttttttaatagggggccaaaatcgcaacattttaaaactta 4521978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 3328951 - 3329093
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||  ||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||||||| |||| |||    
T  3328951 cgcaactttttgtaaagataaggggtcaaaaggcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactttttcca 3329050  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||||||||||||| |||||||    
T  3329051 ttttttttaatagggggccaaaatcgcaacattttgaaactta 3329093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 3781044 - 3780907
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||||||||||| ||||||| ||||||||| |||||| | ||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  3781044 cgcaactttttgtaaagataaagggtcaaaaagcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 3780948  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| | ||||||||||||||||| |||||||    
T  3780947 tttttttaataggg-gtcaaaatcgcaacattttgaaactta 3780907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8339078 - 8339220
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| |||||||| ||||||| ||| |||||||| || ||||||||||||||||| ||||||| ||||||||    
T  8339078 cgcaactttttgtaaagataaggggtcaaaaagcatatttctattatgttaggaggtcaaaaaagcatatttccctaaacataaggggtcacttttgcca 8339177  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| |||||||| |||||||||| |||||||    
T  8339178 ttttttttaatagggggccaaaattgcaacattttgaaactta 8339220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48860868 - 48860773
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcattttt 96  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||  |||||||| || ||||||||||||||||| ||||||||||||    
T  48860868 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagaaggtcaaaatagcatatttccctaaacataaggggtcattttt 48860773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26633497 - 26633635
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||  |||||| | ||||||||||||| ||||||||||||| ||  ||||||||||||||||    
T  26633497 cgcaactttttgtaaagataaggggtcaaaaaacatatttctcttatgtta-ggggtcaaaagagcatatttccctaaagat--ggggtcatttttgcca 26633593  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| | ||||||||||||||||  |||||||    
T  26633594 tttttttaatagggggtcaaaatcgcaacatttagaaactta 26633635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 22447907 - 22448024
Alignment:
Q  26 tcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnnnaatagggagccaaaatc 124  Q
    ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||||| ||||||||        ||||||| ||||||||     
T  22447907 tcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgccatattttttaatagggggccaaaatt 22448006  T
Q  125 gcaacattttaaaactta 142  Q
    ||||||||||||||||||    
T  22448007 gcaacattttaaaactta 22448024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 34878674 - 34878754
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacataggggg 88  Q
    |||||||||||||| |||||||||| ||||||||| |||| | ||||||||||||||| |||||||||||||| |||||||    
T  34878674 ttttgtaaagataagggatcaaaaagcatatttcccttatattagggggtcaaaagagcatatttccctaaacttaggggg 34878754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 20001842 - 20001778
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgc 98  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  20001842 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgc 20001778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28155020 - 28155107
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacataggggg 88  Q
    |||||| ||||||||||||||  | ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||    
T  28155020 cgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatgggg 28155107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 33279729 - 33279875
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnn 105  Q
    ||||||||| |||| ||||||||| | ||||||||| |||||| ||||||||||||||| |||||| |||||||| || ||| || ||||||||          
T  33279729 ttttgtaaatataagggatcaaaagagcatatttcccttatgttagggggtcaaaagagcatattttcctaaaca-agagggccacttttgccatttttt 33279827  T
Q  106 nnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
      ||||||| | ||||||||||||||||||||||||| ||| ||||||    
T  33279828 ttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaa 33279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 40836342 - 40836469
Alignment:
Q  26 tcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca--nnnnnnnaatagggagccaaaat 123  Q
    ||||||||||||||||| |||| | ||||||||||||||  ||||||||||||||||  ||||||| ||||||||         ||||||| | ||||||    
T  40836342 tcaaaaaacatatttcccttatattagggggtcaaaagaacatatttccctaaacat--ggggtcacttttgccatttttttttaatagggggtcaaaat 40836439  T
Q  124 cgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||||||||||||||| ||| ||||||    
T  40836440 cgcaacattttaaaacttagggggcgaaaa 40836469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 9496362 - 9496436
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||||||||||||| ||  |||||| ||||||||| |||||| || |||||||||||| ||||||||||||||||    
T  9496362 ttttgtaaagataaggggacaaaaagcatatttcctttatgttagagggtcaaaagagcatatttccctaaacat 9496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 36311283 - 36311165
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnn--aatagggagccaaaatcgcaacat 131  Q
    ||||||||| |||||| | |||||||||||||||||||| |||||| ||  ||||||| ||||||||         ||||||| ||||||||||||||||    
T  36311283 catatttcccttatgttatggggtcaaaagagtatattttcctaaatat--ggggtcacttttgccatttttttttaataggg-gccaaaatcgcaacat 36311187  T
Q  132 tttaaaacttaagggacgaaaa 153  Q
    ||||||||||| ||||||||||    
T  36311186 tttaaaacttaggggacgaaaa 36311165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 4775983 - 4775918
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||||||  ||||| |||||||||||| || |||||||||||||||| |||||||| ||||||||    
T  4775983 catatttcccgtatgtgagggggtcaaaatagcatatttccctaaacat-gggggtcacttttgcca 4775918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 26127044 - 26127139
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgc 98  Q
    |||||| |||||||||||||| ||  |||||| |||||||||  ||||| || ||||||||| |  ||||||||||||||||  ||||||| ||||||    
T  26127044 cgcaactttttgtaaagataaggggccaaaaagcatatttcccctatgttagagggtcaaaataacatatttccctaaacat--ggggtcacttttgc 26127139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 32315174 - 32315208
Alignment:
Q  119 aaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||||||||||||||||||||||||||||||    
T  32315174 aaaatcgcaacattttaaaacttaagggacgaaaa 32315208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 22416499 - 22416399
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaaca-tagggggtcatttttgcc 99  Q
    ||||| |||||||||||||| || |||||| | ||||||| | |||||| ||  ||||||||||| |||| |||||||||| | |||||||| |||||||    
T  22416499 gcaactttttgtaaagataatgggtcaaaagagcatatttaccttatgttagaaggtcaaaagagcatatatccctaaacattggggggtcacttttgcc 22416400  T
Q  100 a 100  Q
    |    
T  22416399 a 22416399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 32960801 - 32960889
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnnnaatagggagccaaaatcgcaacattttaaaactt 141  Q
    |||||||||| || ||||||||||||||||||||||||| ||||||||        |||||||  |||||||||||||||||| ||||||    
T  32960801 ggggtcaaaa-agcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaactt 32960889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 40836229 - 40836193
Alignment:
Q  117 ccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||||||||||||||||||||| ||||||||||    
T  40836229 ccaaaatcgcaacattttaaaacttaggggacgaaaa 40836193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 25336488 - 25336437
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagg 85  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||||| |||||    
T  25336488 catatttcccttatgttagggggtcaaaagagcataattccctaaatatagg 25336437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 34296529 - 34296596
Alignment:
Q  13 taaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaa 79  Q
    |||||||||||| |||||| | ||||||||||| | || || |||||||||||| |||||||||||||    
T  34296529 taaagataaagggtcaaaagagcatatttccataaagttagagggtcaaaagagcatatttccctaaa 34296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 1743372 - 1743334
Alignment:
Q  44 ttatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  1743372 ttatgttagggggtcaaaagagtatattttcctaaacat 1743334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 26177094 - 26177189
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgc 98  Q
    |||||| |||||||||||||| |   |||||| |||||||||  ||||| || ||||||||| || |||||||||| |||||  ||||||| ||||||    
T  26177094 cgcaactttttgtaaagataatgagccaaaaagcatatttcccctatgttagagggtcaaaatagcatatttccctgaacat--ggggtcacttttgc 26177189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6927636 - 6927595
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttcc 42  Q
    |||||| |||||||||||||| || |||||||||||||||||    
T  6927636 cgcaactttttgtaaagataaggggtcaaaaaacatatttcc 6927595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 8412924 - 8412778
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||  ||||||||    
T  8412924 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttctctaaacatagggggtcgcttttgcca 8412825  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaaggg 146  Q
            ||||||||||||||||||||||||||| |||||||||||    
T  8412824 ttttttttaatagggagccaaaatcgcaacattttgaaacttaaggg 8412778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15298651 - 15298510
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| |||||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  15298651 cgcaactttttgtaaagataagggatcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 15298552  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| |||||| |||||||||||| |||||||    
T  15298551 tttttttaatagggggccaaactcgcaacattttgaaactta 15298510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 18791523 - 18791382
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||| | || ||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  18791523 cgcaactttttgtaaagatgaggggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 18791424  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||| | |||||||||||||||||||||||||||    
T  18791423 tttttttaatagagggccaaaatcgcaacattttaaaactta 18791382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 22968293 - 22968444
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  22968293 cgcaactttttgtaaagataaggg-tcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 22968391  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  22968392 ttttttttaataggg-gccaaaatcgcaacattttgaaacttaaggggcgaaaa 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 23820100 - 23819949
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  23820100 cgcaactttttgtaaagataaggg-tcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 23820002  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  23820001 ttttttttaataggg-gccaaaatcgcaacattttgaaacttaaggggcgaaaa 23819949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 4597544 - 4597685
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca- 100  Q
    ||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||     
T  4597544 gcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcatttttgccat 4597643  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| |||||||| |||||||||| |||||||    
T  4597644 tttttataatagggggccaaaattgcaacattttgaaactta 4597685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 24603527 - 24603374
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  24603527 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24603428  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            |||||||   ||||||||||||||||| |||||||| |||||||||    
T  24603427 ttttttttaataggggagcaaaatcgcaacattttgaaacttaaaggacgaaaa 24603374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26710445 - 26710587
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  26710445 cgcaactttttgtaaagataaggggtcaaaaaacatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcgcttttgcca 26710544  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||||||||||||| |||||||    
T  26710545 ttttttttaatagggggccaaaatcgcaacattttgaaactta 26710587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24051174 - 24051033
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||| |||| || |||||||  |||||||  |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  24051174 cgcaactttttgtaaatataaggggtcaaaaagtatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 24051075  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| ||||||||||||||||||| |||||||    
T  24051074 tttttttaatagggggccaaaatcgcaacattttgaaactta 24051033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 34834084 - 34833992
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  34834084 ttttgtaaagataacgggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 34833992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 25819850 - 25819709
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  25819850 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacata-ggggtcacttttgcca 25819752  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| |||||||| ||||||||||||||||||    
T  25819751 ttttttttaatagggggccaaaattgcaacattttaaaactta 25819709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31210960 - 31210818
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| |||||| |||||||||||||||||| ||||| ||    
T  31210960 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgtca 31210861  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||  |||||||||||||||||||||||||||    
T  31210860 ttttttttaataggaggccaaaatcgcaacattttaaaactta 31210818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 3118838 - 3118746
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||||||||||  | ||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  3118838 ttttgtaaagataagaggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagagggtcacttttgcca 3118746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4013804 - 4013956
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    ||||||||||||  ||||||| || |||||| | ||||||||| |||| | ||||||||||||||| |||||||||||||||| |||||||| ||||| |    
T  4013804 cgcaacattttgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacat-gggggtcacttttgac 4013902  T
Q  100 annnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |       ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  4013903 atttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaa 4013956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 32451892 - 32451750
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| |||||||  |||||||||||||||| ||||||||    
T  32451892 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttctataaacatagggggtcacttttgcca 32451793  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||| ||||||||| |||||||    
T  32451792 ttttttttaatagggggccaaaatcacaacattttgaaactta 32451750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 32682423 - 32682556
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnn 107  Q
    |||||||||||||| || ||||||||||||||||| |||||| | | ||||||||||| ||||||||||||||||| ||||||| |||||| |           
T  32682423 ttttgtaaagataaggggtcaaaaaacatatttcctttatgttatgaggtcaaaagagcatatttccctaaacata-ggggtcacttttgctattttttt 32682521  T
Q  108 aatagggagccaaaatcgcaacattttaaaactta 142  Q
    ||||| || ||||||| ||||||||||||||||||    
T  32682522 aatagagaaccaaaattgcaacattttaaaactta 32682556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 14572316 - 14572456
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||| ||||||||| || ||||||| ||||||||| |||||| |||  |||||||||| ||||||||||||||||| ||||||| ||||||||    
T  14572316 cgcaactttttataaagataaggggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 14572414  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| |||||||| |||| |||||||||||||    
T  14572415 tttttttaatagggggccaaaattgcaatattttaaaactta 14572456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 35102630 - 35102716
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacataggggg 88  Q
    ||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||    
T  35102630 gcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggg 35102716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 22269570 - 22269423
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccann 102  Q
    |||| |||||||||||||| || ||||||||||||||||| |||||| |  |||||||||||  ||||||||||||||||| ||||||| ||||||||      
T  22269570 caactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-agggtcaaaagaacatatttccctaaacata-ggggtcacttttgcca-t 22269474  T
Q  103 nnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
         ||||| | ||||||||||||| ||||| |||||||  |||||||||    
T  22269473 tttttaatagagggccaaaatcgcaatattttgaaacttagaggacgaaaa 22269423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 18749297 - 18749408
Alignment:
Q  32 aacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnnnaatagggagccaaaatcgcaaca 130  Q
    ||||||||||| |||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||||        ||||||| | |||||||||||||    
T  18749297 aacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaatcgcaaca 18749396  T
Q  131 ttttaaaactta 142  Q
    |||| |||||||    
T  18749397 ttttgaaactta 18749408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 12427391 - 12427298
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||||||||||||| | |||||| ||||||||| |||||| |  || ||||||||| |||||||||||||||| |||| ||| ||||||||    
T  12427391 ttttgtaaagataaagggtaaaaaaaacatatttcctttatgttaatggttcaaaagagcatatttccctaaacatgggggatcacttttgcca 12427298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 4371064 - 4370965
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||||| |||||||||||||| || |||||  | ||||||||| |||||| ||||| ||||||||| |||||||||||||||| | |||||| |||||||    
T  4371064 cgcaactttttgtaaagataaggggtcaaaggagcatatttcccttatgttagggg-tcaaaagagcatatttccctaaacatggagggtcacttttgcc 4370966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 16415502 - 16415555
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggg 87  Q
    ||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||    
T  16415502 catatttcccttatgttaggcggtcaaaagaatatatttccctaaacatagggg 16415555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 2058993 - 2059096
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattt 133  Q
    ||||||||| |||||| |||| ||||||| || ||||||||||||||||   |||||| ||||||||       ||||||| | ||||||||||||||||    
T  2058993 catatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcacttttgcca-ttttttaatagggggtcaaaatcgcaacattt 2059091  T
Q  134 taaaa 138  Q
    |||||    
T  2059092 taaaa 2059096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 8149152 - 8149186
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaactta 142  Q
    ||||| |||||||||||||||||||||||||||||    
T  8149152 aatagtgagccaaaatcgcaacattttaaaactta 8149186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 12291467 - 12291430
Alignment:
Q  116 gccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  12291467 gccaaaatcgcaacattttgaaacttaggggacgaaaa 12291430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 18749155 - 18749110
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| |||||||| ||||||||||||||| |||||| ||||||    
T  18749155 aatagggggccaaaattgcaacattttaaaacataaggggcgaaaa 18749110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 18749236 - 18749309
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccct 76  Q
    |||| |||||||||||||| || ||||||| ||||||||| |||||| | | ||||||| ||  ||||||||||    
T  18749236 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatgaggtcaaatgaacatatttccct 18749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 26240089 - 26240025
Alignment:
Q  34 catatttccattatgtca-gggggtcaaaagagtatatttccctaaacatagggggtcatttttg 97  Q
    ||||||||| |||||| | |||||||||||||| |||||||| |||||||  ||||||| |||||    
T  26240089 catatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcacttttg 26240025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 49825 - 49672
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  49825 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgcca 49726  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            |||||||  |||||||||||||||||||||||||||||| ||||||    
T  49725 ttttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaa 49672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 62364 - 62211
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  62364 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgcca 62265  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            |||||||  |||||||||||||||||||||||||||||| ||||||    
T  62264 ttttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaa 62211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4519005 - 4519158
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| | ||||||||| ||||||||||||||||||||||||| ||||||||    
T  4519005 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggagatcaaaagagcatatttccctaaacatagggggtcacttttgcca 4519104  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||||||||||||||||||||||| |||||||  |||||||||    
T  4519105 ttttttttaatagggagccaaaatcgcaacattttgaaacttagaggacgaaaa 4519158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 12723399 - 12723541
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  12723399 cgcaactttttgtaaagataacgggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttctctaaacatagggggtcatttttgcca 12723498  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||||||||||||| |||||||    
T  12723499 ttttttttaatagggggccaaaatcgcaacattttgaaactta 12723541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17648409 - 17648267
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  17648409 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 17648310  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||||||||||||| ||||||||| |||||||    
T  17648309 ttttttttaatagggagccaaaatcacaacattttgaaactta 17648267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19391525 - 19391624
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  19391525 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 19391624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 21666424 - 21666551
Alignment:
Q  13 taaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatag 112  Q
    ||||||||| || ||||||||||||||||| |||||| |||||||||| |||| |||||||||||||||| |||||||| ||||||||       |||||    
T  21666424 taaagataaggggtcaaaaaacatatttcccttatgttagggggtcaagagagcatatttccctaaacatggggggtcacttttgccatttttttaatag 21666523  T
Q  113 ggagccaaaatcgcaacattttaaaact 140  Q
    || ||||||||||||||||||| |||||    
T  21666524 ggggccaaaatcgcaacattttgaaact 21666551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19924431 - 19924289
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19924431 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcagaagagtatatttccctaaacatagggggtcacttttgcca 19924332  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            |||| || |||||||| ||||||||||||||||||    
T  19924331 ttttttttaataaggggccaaaattgcaacattttaaaactta 19924289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 30784402 - 30784544
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  30784402 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcacttttgcca 30784501  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            |||| || ||||||||||||||||||| |||||||    
T  30784502 ttttttttaataaggggccaaaatcgcaacattttgaaactta 30784544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 33895539 - 33895399
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccan 101  Q
    ||||| |||||||||||||| || | ||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||| ||| ||||||       
T  33895539 gcaactttttgtaaagataaggggttaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggatcacttttgcttt 33895440  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
          |||| ||| ||||||| ||||||||||||||||||    
T  33895439 ttttttaatatggaaccaaaattgcaacattttaaaactta 33895399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 5192409 - 5192551
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||||||||  | ||||||||||||||||| |||||| | | ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  5192409 cgcaactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 5192508  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||| |  ||||||||||||||||||||||||||    
T  5192509 ttttttttaatagaggaccaaaatcgcaacattttaaaactta 5192551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8802538 - 8802679
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| | ||||||| |||||| ||| ||||||||||| |||||||||||||||||| |||||| ||||||||    
T  8802538 cgcaactttttgtaaagataaggggtcaaaaagc-tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgcca 8802636  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||||||||||||| |||||||    
T  8802637 ttttttttaatagggggccaaaatcgcaacattttgaaactta 8802679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 38630221 - 38630126
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcattttt 96  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| |||||||||||||||||||| |||| ||||    
T  38630221 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcactttt 38630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 32400461 - 32400559
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||| ||||||||||||||| | ||||||  ||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||||| ||||||||    
T  32400461 gcaactttttgtaaagataaatggtcaaaaggcatatttcccttatgttagggggtcaaaagcgcatatttcactaaacatagggggtcacttttgcca 32400559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 44147130 - 44146997
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnn 106  Q
    |||||||||||||| || ||||||| ||||||||| |||||| ||| |||||||| || ||||||||||||||||| ||||||| ||||||||           
T  44147130 ttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaatagcatatttccctaaacata-ggggtcacttttgccattttttt 44147032  T
Q  107 naatagggagccaaaatcgcaacattttaaaactt 141  Q
     ||||||| ||||||||||||||||||| ||||||    
T  44147031 taatagggggccaaaatcgcaacattttgaaactt 44146997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 142
Target Start/End: Original strand, 21929967 - 21930081
Alignment:
Q  27 caaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgc 126  Q
    |||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||       ||||||| | |||||||||    
T  21929967 caaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgccatttttttaatagggggtcaaaatcgc 21930065  T
Q  127 aacattttaaaactta 142  Q
    |||||||| |||||||    
T  21930066 aacattttgaaactta 21930081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 3380363 - 3380222
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccan 101  Q
    ||||| ||||||| ||||||  | ||||||||||||||||| |||||  || ||| |||||||| |||||| ||||||||| |||||||| | ||  ||     
T  3380363 gcaactttttgtagagataagaggtcaaaaaacatatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcactattttcat 3380264  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaacttaa 143  Q
          ||||||||||||||||||||||||||| ||||||||    
T  3380263 ttttttaatagggagccaaaatcgcaacattttgaaacttaa 3380222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4807738 - 4807836
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatag-ggggtcatttttgc 98  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||  |||||||| ||||||||| ||||||| ||||||    
T  4807738 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagaacatatttccttaaacatagaggggtcacttttgc 4807836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22452311 - 22452409
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||||| ||||||||||||||  | ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||| ||| | ||||| |||||||    
T  22452311 cgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaatatatgaggtcacttttgcc 22452409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 8802458 - 8802413
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||    
T  8802458 aatagggggccaaaatcgcaacattttaaaacatacgggacgaaaa 8802413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 18881562 - 18881517
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||    
T  18881562 aatagggggccaaaatcgcaacatttcaaaacttaagggtcgaaaa 18881517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 7116461 - 7116423
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaaggg 146  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  7116461 aatagggtgccaaaatcgcaacatttcaaaacttaaggg 7116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 21666332 - 21666287
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||||| |||||| ||||||||  ||||||||||||||||||    
T  21666332 aatagggagctaaaatcacaacatttcgaaacttaagggacgaaaa 21666287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 1824719 - 1824674
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  1824719 ggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 1824674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 1859164 - 1859119
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  1859164 ggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 1859119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 7117253 - 7117350
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaa-aacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||| |||||||||||||| || | |||| |||| ||| || || ||| || |||||||||||| ||||||| ||||||||  ||||||| ||||||||    
T  7117253 gcaactttttgtaaagataaggggttaaaagaacacattccccttctgttagtgggtcaaaagagcatatttctctaaacat--ggggtcacttttgcca 7117350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 15700913 - 15700760
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||| || |||||    
T  15700913 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgcca 15700814  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            |||||||  |||||||||||||||||||||||||||||| ||||||    
T  15700813 ttttttttaataggggtccaaaatcgcaacattttaaaacttaaggggcgaaaa 15700760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 25298939 - 25299080
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| |||||||||||||||||||| |||||| | | ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  25298939 cgcaactttttgtaaagataagggatcaaaaaacatatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 25299038  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| || |||||||||||||||| |||||||    
T  25299039 tttttttaatagggggctaaaatcgcaacattttgaaactta 25299080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 4588027 - 4587873
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || | ||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  4588027 cgcaactttttgtaaagataaggggttaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 4587928  T
Q  101 --nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
             ||||||| ||||||||||||||||||| ||||||| ||| ||||||    
T  4587927 tttttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaa 4587873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 2986852 - 2986699
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||| ||    
T  2986852 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgtca 2986753  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| ||||||||||||||||||| |||||||| || ||||||    
T  2986752 ttttttttaatagggggccaaaatcgcaacattttgaaacttaaagggcgaaaa 2986699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 38716359 - 38716218
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||  |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  38716359 cgcaactttttgtaaagataaggggtcaaaaagcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgcca 38716260  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| | |||||||||||||||||||||||||    
T  38716259 tttttttaatagggggtcaaaatcgcaacattttaaaactta 38716218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 11176071 - 11175931
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-n 101  Q
    |||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||      
T  11176071 caactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 11175972  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
          ||||||| ||||||||||||||||||| |||||||    
T  11175971 ttttttaatagggggccaaaatcgcaacattttgaaactta 11175931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 9051165 - 9051307
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||||||||  | ||||||| ||||||||| |||||| ||| ||||||||||| |||||||||||||||||||| |||| ||||||||    
T  9051165 cgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggagtcacttttgcca 9051264  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| | |||||||||||||||||||||||||    
T  9051265 ttttttttaatagggggtcaaaatcgcaacattttaaaactta 9051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 9787718 - 9787573
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnn 107  Q
    |||||||||||||| || ||||||| ||||||||| |||||| ||  ||||||||||| |||||||||||||||||| |||||| ||||||||           
T  9787718 ttttgtaaagataaggggtcaaaaagcatatttcccttatgttagcaggtcaaaagagcatatttccctaaacatagtgggtcacttttgccattttttt 9787619  T
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| | |||||| ||||||||||||||| || ||| ||||||    
T  9787618 aatagggggtcaaaattgcaacattttaaaacatagggggcgaaaa 9787573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 30714414 - 30714550
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-n 101  Q
    |||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||| ||||||||||||||| ||||||||      
T  30714414 caactttttgtaaagataacgggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcacttttgccatt 30714513  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaa 138  Q
          ||||||| |||||||| ||||||||||||||    
T  30714514 ttttttaatagggggccaaaattgcaacattttaaaa 30714550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 6763862 - 6763997
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnn 106  Q
    |||||||||||||| || ||||||| ||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||           
T  6763862 ttttgtaaagataaggggtcaaaaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttt 6763961  T
Q  107 naatagggagccaaaatcgcaacattttaaaactta 142  Q
     |||||||  |||||||||||||||||| |||||||    
T  6763962 taataggggaccaaaatcgcaacattttgaaactta 6763997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15735230 - 15735088
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || |||||| |||||||||| |||||| | | ||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  15735230 cgcaactttttgtaaagataaggggtcaaaatacatatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcacttttgcca 15735131  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            |||||||  |||||||||||||||||| |||||||    
T  15735130 tttcttttaataggggaccaaaatcgcaacattttgaaactta 15735088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 22191205 - 22191059
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnn 106  Q
    |||||||||||||| || ||||||  ||||||||| |||||| |||  |||||||||| ||||||||||||||||||||||||| ||||||||           
T  22191205 ttttgtaaagataaggggtcaaaaggcatatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttt 22191106  T
Q  107 naatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
      |||||| |||||||| ||||||||||||||| || ||||||||||    
T  22191105 tgatagggggccaaaattgcaacattttaaaacataggggacgaaaa 22191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 18537967 - 18538108
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca- 100  Q
    ||||| |||||||||||||| || ||||||| ||||||||| | |||| | | |||||||| || ||||||||||||||||||||||||| ||||||||     
T  18537967 gcaactttttgtaaagataaggggtcaaaaagcatatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcacttttgccat 18538066  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| ||||||||||||||||||| |||||||    
T  18538067 tttttttaatagggggccaaaatcgcaacattttgaaactta 18538108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 36464404 - 36464289
Alignment:
Q  35 atatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacatttt 134  Q
    |||||||| |||||| ||||||||||||||  ||||||||||||||||  ||||||| ||||||||       ||||||| | |||||||||||||||||    
T  36464404 atatttcccttatgttagggggtcaaaagatcatatttccctaaacat--ggggtcacttttgccattttttaaataggg-gtcaaaatcgcaacatttt 36464308  T
Q  135 aaaacttaagggacgaaaa 153  Q
    |||||||||||| ||||||    
T  36464307 aaaacttaaggggcgaaaa 36464289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 331879 - 331779
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||||| ||||| |||||||| ||||||||||| ||||||||| ||| || || |||||||||||| |||||||||||||||| |  ||||| |||||||    
T  331879 cgcaactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacatggaaggtcacttttgcc 331780  T
Q  100 a 100  Q
    |    
T  331779 a 331779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 22387214 - 22387287
Alignment:
Q  9 tttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    |||||| |||||| || ||||||||||||||||   ||||| ||||||||||||||| ||||||| ||||||||    
T  22387214 tttgtatagataaggggtcaaaaaacatatttctcatatgttagggggtcaaaagagcatatttcactaaacat 22387287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 26829332 - 26829376
Alignment:
Q  109 atagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||| |||||||||||||||||||||||||||||||| |||||    
T  26829332 atagggggccaaaatcgcaacattttaaaacttaagggatgaaaa 26829376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 17368381 - 17368318
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagag 65  Q
    ||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| |||||||||||    
T  17368381 gcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagag 17368318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 25884236 - 25884192
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaa 152  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||||    
T  25884236 aatagggggccaaaatcgcaacattttaaaacttagggggcgaaa 25884192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 30714333 - 30714288
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| |||||||||||||||||||||||| || ||| ||||||    
T  30714333 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaa 30714288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 142
Target Start/End: Complemental strand, 32677869 - 32677840
Alignment:
Q  113 ggagccaaaatcgcaacattttaaaactta 142  Q
    ||||||||||||||||||||||||||||||    
T  32677869 ggagccaaaatcgcaacattttaaaactta 32677840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 1020554 - 1020478
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaa 79  Q
    |||| ||||| |||||||||||  |||||| ||||||||  |||||| || ||||||||| || |||||||| ||||    
T  1020554 caactttttgaaaagataaagggacaaaaatcatatttctcttatgttagagggtcaaaatagcatatttccataaa 1020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 2123636 - 2123668
Alignment:
Q  121 aatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||||||||||||||||||||| |||||||    
T  2123636 aatcgcaacattttaaaacttaaggaacgaaaa 2123668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 25884434 - 25884470
Alignment:
Q  117 ccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  25884434 ccaaaattgcaacattttaaaacttaggggacgaaaa 25884470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 25011899 - 25011748
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-n 101  Q
    |||| |||||||||||||| || |||||||||||||  || |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||      
T  25011899 caactttttgtaaagataaggggtcaaaaaacatatcccccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatt 25011800  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
          ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  25011799 ttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaa 25011748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 43793769 - 43793910
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||| |||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  43793769 cgcaactttttgtaaatataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgcca 43793868  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| ||||||||||||||||||| |||||||    
T  43793869 tttttttaatagggggccaaaatcgcaacattttgaaactta 43793910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 41877172 - 41877304
Alignment:
Q  9 tttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnna 108  Q
    ||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||       |    
T  41877172 tttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttta 41877270  T
Q  109 atagggagccaaaatcgcaacattttaaaactta 142  Q
    |||||||||||||||||||||||||| |||||||    
T  41877271 atagggagccaaaatcgcaacattttgaaactta 41877304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 55780552 - 55780400
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||| | ||| || ||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  55780552 cgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttagggg-tcaaaagagcatatttccctaaacatagggggtcacttttgcca 55780454  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| |||||||||||||||||| |||||||||||| ||||||    
T  55780453 ttttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaa 55780400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 55844732 - 55844580
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||| | ||| || ||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  55844732 cgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggttagggg-tcaaaagagcatatttccctaaacatagggggtcacttttgcca 55844634  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            ||||||| |||||||||||||||||| |||||||||||| ||||||    
T  55844633 ttttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaa 55844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 4433323 - 4433462
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc-an 101  Q
    |||| |||||||||||||| || ||||||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||       
T  4433323 caactttttgtaaagataaggggtcaaaaaacatattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccttt 4433422  T
Q  102 nnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
          ||||||| |||||||||||||||||||||||||||    
T  4433423 ttttttaataggg-gccaaaatcgcaacattttaaaactta 4433462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 35475448 - 35475315
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnn 106  Q
    |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||  |||||| ||||||||           
T  35475448 ttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata--gggtcacttttgccattttttt 35475351  T
Q  107 naatagggagccaaaatcgcaacattttaaaactta 142  Q
     |||||||||||||||||||||||||||||||||||    
T  35475350 taatagggagccaaaatcgcaacattttaaaactta 35475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1588551 - 1588703
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||| ||||| |||| |||    
T  1588551 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacataggaggtcactttttcca 1588649  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
            |||| |  || |||||||||||||||||||||||||||||||||||    
T  1588650 tttttttaaatatgaggcgaaaatcgcaacattttaaaacttaagggacgaaaa 1588703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 9195802 - 9195953
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| | ||| ||||||||| ||||||||||||||||||||||||| ||||| ||    
T  9195802 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcacttttgtca 9195900  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
           |||||||  |||||||||||||||||| ||| ||| ||| ||||||    
T  9195901 tttttttaataggggaccaaaatcgcaacattttgaaatttagggggcgaaaa 9195953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13397813 - 13397912
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  13397813 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 13397912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 15058956 - 15059055
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  15058956 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 15059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 4357418 - 4357276
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||  ||||||||||| ||||||||||||| |||||| |||| ||||||||    
T  4357418 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagaaggtcaaaagagcatatttccctaaatatagggtgtcacttttgcca 4357319  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            |||||||||| |||||||||||||||| |||||||    
T  4357318 ttttttttaatagggagctaaaatcgcaacattttgaaactta 4357276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 5304485 - 5304625
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||| | |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  5304485 cgcaactttttgtaaagataaggggtcaaaaagcatattttccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 5304583  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||| | | ||||||||||||||||| |||||||    
T  5304584 tttttttaatagagggtcaaaatcgcaacattttgaaactta 5304625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 52838393 - 52838255
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| |||||||||  ||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  52838393 cgcaactttttgtaaagataaggg-tcaaaaagcatatttcccgtatgttaggaggtcaaaagagcatatttcc-taaacatagggggtcatttttgcca 52838296  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||| | | |||||||||||||||||||||||||    
T  52838295 tttttttaatagag-gtcaaaatcgcaacattttaaaactta 52838255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 2931480 - 2931345
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnn 106  Q
    |||||||||||||| || ||||||| ||||||||| |||||| | | ||||||||||| ||||||||||||||||||||||||| |||| |||           
T  2931480 ttttgtaaagataaggggtcaaaaagcatatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcacttttaccattttttt 2931381  T
Q  107 naatagggagccaaaatcgcaacattttaaaactta 142  Q
     ||||| || ||||||| ||||||||||||||||||    
T  2931380 taatagagaaccaaaattgcaacattttaaaactta 2931345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 13826557 - 13826655
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||| ||||||| ||||||| ||||||||    
T  13826557 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacata-ggggtcacttttgcca 13826655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 27018379 - 27018282
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||| |||||||| ||||| || ||||||||||||||||| || ||| ||||||||||||||| |||||||||||||||||  |||||| ||||||||    
T  27018379 gcaactttttgtaaggataaggggtcaaaaaacatatttcccttttgttagggggtcaaaagagcatatttccctaaacata-tgggtcacttttgcca 27018282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 6789103 - 6789249
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnn 106  Q
    |||||||||||||| || ||||||||||| ||||  | |||| ||| |||| ||| || ||||||||||||||||||||||||| ||||||||           
T  6789103 ttttgtaaagataacgggtcaaaaaacatttttctctcatgttaggaggtcgaaacagcatatttccctaaacatagggggtcacttttgccattttatt 6789202  T
Q  107 naatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
     || |||| ||||||||||||||||||| |||||||| || ||||||    
T  6789203 taacagggggccaaaatcgcaacattttgaaacttaaagggcgaaaa 6789249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 41034802 - 41034703
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||| |||| || ||||||| ||||||||| |||||| ||| ||||||||||  |||||||||| | |||||||||||| ||||||||    
T  41034802 cgcaactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagatcatatttccctgagcatagggggtcacttttgcca 41034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 4098822 - 4098726
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttg 97  Q
    ||||| |||||  ||||||| || |||||| | ||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  4098822 gcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttcccaaaacatagggggtcacttttg 4098726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 19232481 - 19232581
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaa-aacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcc 99  Q
    |||||| |||||||||||||| || | |||| ||||||||| | |||||| |||| |||||||||| ||||||||||||||||| ||| ||| |||||||    
T  19232481 cgcaactttttgtaaagataaggggtaaaaaaaacatattttccttatgttagggagtcaaaagagcatatttccctaaacatatgggatcacttttgcc 19232580  T
Q  100 a 100  Q
    |    
T  19232581 a 19232581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 9397356 - 9397258
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||| ||||||||||||||||| | |||||| ||||||||| |||||| || |||||||||||| ||||||||||| |||| || | ||| ||||||||    
T  9397356 caactttttgtaaagataaagggttaaaaaaacatatttcctttatgttagagggtcaaaagagcatatttccctatacatgggagatcacttttgcca 9397258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 153
Target Start/End: Complemental strand, 15734512 - 15734413
Alignment:
Q  54 gggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||||||  |||||||||||||||||| |||||| ||||| ||       ||||| | |||||||||| |||||||| ||||||||||| ||||||    
T  15734512 gggtcaaaagaacatatttccctaaacatagagggtcacttttgtcatttttttaatagcgggccaaaatcgtaacattttgaaacttaagggccgaaaa 15734413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 25618786 - 25618833
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  25618786 ggggtcaaaagagcatatttccctaaacttagggggtcacttttgcca 25618833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 45633590 - 45633504
Alignment:
Q  14 aaagataaaggatcaaaaaa-catatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||||| || |||||| | ||||||||| |||||| ||| |||||| |||| |||||||||||||||||||| |||| ||||||||    
T  45633590 aaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacatagggagtcacttttgcca 45633504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2715855 - 2715930
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttcccta 77  Q
    |||||| |||||||||||||| || ||||||| |||||||||  ||||| | ||||||||||||  |||||||||||    
T  2715855 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccatatgtta-ggggtcaaaagatcatatttcccta 2715930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 146
Target Start/End: Original strand, 36729247 - 36729339
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattttaaaacttaaggg 146  Q
    ||||||||||||  |||||||||||||||| | |||||| ||||| ||        |||||||| |||||||||||| ||||||||||||||||    
T  36729247 ggggtcaaaagatcatatttccctaaacat-gagggtcacttttgtcaattttttcatagggagtcaaaatcgcaactttttaaaacttaaggg 36729339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 51291341 - 51291389
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||| |||||| ||||||||||||||  ||||||||||||||||    
T  51291341 catatttcccttatgttagggggtcaaaagaacatatttccctaaacat 51291389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 14804464 - 14804435
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||||||||||||||||||||||||    
T  14804464 ggggtcaaaagagtatatttccctaaacat 14804435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 43793689 - 43793644
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| |||||||||||||||||||||||| || ||| ||||||    
T  43793689 aatagggggccaaaatcgcaacattttaaaacatagggggcgaaaa 43793644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 45633682 - 45633727
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    ||||||| || ||||||||||||||||||||||||| || ||||||    
T  45633682 aatagggggctaaaatcgcaacattttaaaacttaaagggcgaaaa 45633727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 48158729 - 48158681
Alignment:
Q  34 catatttccattatgtcagggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||| |||||| || |||||||||||  ||||||||||||||||    
T  48158729 catatttcccttatgttagagggtcaaaagatcatatttccctaaacat 48158681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 5787 - 5929
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  5787 cgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 5886  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| ||||||||||||| ||||| |||||||    
T  5887 tttttttaaatagggggccaaaatcgcaatattttgaaactta 5929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 2187 - 2327
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| |||||| || |||||| ||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  2187 cgcaactttttgtaaagataaggggtcaaaaagcatattgcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcca 2286  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| |||||||||||||| ||||||||||||    
T  2287 tttttttaatagggggccaaaatcgcaac-ttttaaaactta 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 61979 - 61838
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca- 100  Q
    ||||| |||||||||||||| || ||||||| ||||||||| |||||| |||  |||||||||| ||||||||||||||||||||||||| ||||||||     
T  61979 gcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagggggtcacttttgccat 61880  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| ||||||||||||||||||| |||||||    
T  61879 tttttttaatagggggccaaaatcgcaacattttgaaactta 61838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19448 - 19309
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| ||||| ||||||||| ||||||||||||||||| ||||||| ||||||||    
T  19448 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggg-tcaaaagagcatatttccctaaacata-ggggtcacttttgcca 19351  T
Q  101 nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
           ||||||| | ||||||||||||||||| |||||||    
T  19350 tttttttaatagggggtcaaaatcgcaacattttgaaactta 19309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1912 - 2011
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||| || ||||||| ||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  1912 cgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcacttttgcca 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 153
Target Start/End: Original strand, 25114 - 25255
Alignment:
Q  13 taaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca-nnnnnnnaata 111  Q
    ||||||||| || ||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||        ||||    
T  25114 taaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttaccattttttttaata 25213  T
Q  112 gggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
     || |||||||||||||||||||| ||||||  |||||||||    
T  25214 aggggccaaaatcgcaacattttagaacttagaggacgaaaa 25255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 3099 - 3197
Alignment:
Q  2 gcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    ||||| ||||||||||||||  | ||||||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  3099 gcaactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgcca 3197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 3713 - 3803
Alignment:
Q  8 ttttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||||||||||| || ||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  3713 ttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaagagcatatttccctaaacat--ggggtcacttttgcca 3803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 142085 - 142226
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| ||||||||||||||  | ||||||| ||||||||| |||||| ||| ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  142085 cgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacata-ggggtcacttttgcca 142183  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            |||||||  ||||||| ||||||||||||||||||    
T  142184 ttttttttaataggggaccaaaattgcaacattttaaaactta 142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 66340 - 66254
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggg 87  Q
    |||||| |||||||||||||| || ||||||| |||| |||| |||||| ||| |||||||| || |||||||||||||||||||||    
T  66340 cgcaactttttgtaaagataaggggtcaaaaagcatagttcccttatgttaggaggtcaaaatagcatatttccctaaacatagggg 66254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5998 - 5911
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcaggggg-tcaaaagagtatatttccctaaacatagggg 87  Q
    |||||| |||| ||||||||| || ||||||| ||||||||| |||||| |||||| |||||| || |||||||||||||||||||||    
T  5998 cgcaactttttataaagataaggggtcaaaaagcatatttcccttatgttaggggggtcaaaatagcatatttccctaaacatagggg 5911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 2157 - 2021
Alignment:
Q  1 cgcaacattttgtaaagataaaggatcaaaaaacatatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttgcca 100  Q
    |||||| |||||||||||||  || ||||||| ||| ||||| |||||| ||| ||||||||||| ||||||||||||      ||||||| ||||||||    
T  2157 cgcaactttttgtaaagatatggggtcaaaaagcatgtttcccttatgttaggaggtcaaaagagcatatttccctaa------ggggtcacttttgcca 2064  T
Q  101 -nnnnnnnaatagggagccaaaatcgcaacattttaaaactta 142  Q
            ||||||| | |||||||||||||||||||||||||    
T  2063 ttttttttaatagggggtcaaaatcgcaacattttaaaactta 2021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 455061 - 455000
Alignment:
Q  36 tatttccattatgtcagggggtcaaaagagtatatttccctaaacatagggggtcatttttg 97  Q
    ||||||| |||||| ||||||| ||||||| |||||||||||||||| |||||||| |||||    
T  455061 tatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggtcacttttg 455000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 5401 - 5317
Alignment:
Q  55 ggtcaaaagagtatatttccctaaacatagggggtcatttttgccannnnnnnaatagggagccaaaatcgcaacattttaaaac 139  Q
    ||||||||||| ||||||  ||||||||| ||||||| ||||||||       ||||||| |||||||| |||||||||| ||||    
T  5401 ggtcaaaagagcatatttttctaaacataaggggtcacttttgccatttttttaatagggggccaaaattgcaacattttgaaac 5317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 29941 - 29978
Alignment:
Q  116 gccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  29941 gccaaaattgcaacattttaaaacttaagggacaaaaa 29978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 112372 - 112417
Alignment:
Q  108 aatagggagccaaaatcgcaacattttaaaacttaagggacgaaaa 153  Q
    |||| ||||||||||| |||||||||||||||||  ||||||||||    
T  112372 aataaggagccaaaattgcaacattttaaaactttggggacgaaaa 112417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 250658 - 250703
Alignment:
Q  3 caacattttgtaaagataaaggatcaaaaaacatatttccattatg 48  Q
    |||| |||||||||||||| || ||||||||||||||||| |||||    
T  250658 caactttttgtaaagataaggggtcaaaaaacatatttcccttatg 250703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 82
Target Start/End: Original strand, 35263 - 35292
Alignment:
Q  53 ggggtcaaaagagtatatttccctaaacat 82  Q
    ||||||||||||||||||||||||||||||    
T  35263 ggggtcaaaagagtatatttccctaaacat 35292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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