View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8376_low_1 (Length: 1120)

Name: NF8376_low_1
Description: NF8376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8376_low_1
NF8376_low_1
[»] chr8 (55 HSPs)
chr8 (11-422)||(42354171-42354564)
chr8 (700-1106)||(42354731-42355128)
chr8 (452-546)||(12831047-12831141)
chr8 (452-548)||(504127-504223)
chr8 (452-548)||(15197331-15197427)
chr8 (477-548)||(20074965-20075036)
chr8 (452-547)||(40423949-40424044)
chr8 (364-422)||(8841350-8841408)
chr8 (452-546)||(37038479-37038573)
chr8 (452-546)||(42221515-42221609)
chr8 (467-546)||(1179961-1180040)
chr8 (478-545)||(5957831-5957898)
chr8 (452-546)||(14547922-14548016)
chr8 (452-548)||(23122603-23122699)
chr8 (452-548)||(34012302-34012398)
chr8 (483-546)||(4854900-4854963)
chr8 (478-541)||(10621119-10621182)
chr8 (364-422)||(10284549-10284607)
chr8 (452-546)||(10284637-10284731)
chr8 (368-418)||(12831175-12831225)
chr8 (456-546)||(16056411-16056501)
chr8 (456-546)||(16383377-16383467)
chr8 (365-422)||(5957954-5958011)
chr8 (478-547)||(15048214-15048282)
chr8 (457-546)||(17443825-17443914)
chr8 (481-546)||(34307216-34307281)
chr8 (452-548)||(43414587-43414683)
chr8 (368-418)||(504043-504093)
chr8 (368-418)||(23122519-23122569)
chr8 (465-546)||(44507106-44507187)
chr8 (621-661)||(42354661-42354701)
chr8 (363-415)||(43414498-43414550)
chr8 (483-546)||(24307830-24307893)
chr8 (292-354)||(11904974-11905035)
chr8 (708-762)||(26835609-26835663)
chr8 (368-418)||(34012218-34012268)
chr8 (364-422)||(37038603-37038661)
chr8 (489-546)||(14055635-14055692)
chr8 (364-416)||(32707921-32707973)
chr8 (791-827)||(33972195-33972231)
chr8 (714-762)||(41849447-41849495)
chr8 (292-360)||(42110548-42110615)
chr8 (714-762)||(43872573-43872621)
chr8 (364-415)||(4854781-4854832)
chr8 (483-546)||(24307629-24307692)
chr8 (452-526)||(8841438-8841512)
chr8 (507-545)||(9122196-9122234)
chr8 (368-418)||(14548050-14548100)
chr8 (452-546)||(15258935-15259029)
chr8 (363-401)||(20074869-20074907)
chr8 (292-354)||(35200677-35200738)
chr8 (452-494)||(42354594-42354636)
chr8 (368-418)||(44507010-44507059)
chr8 (367-416)||(16056322-16056371)
chr8 (367-416)||(40423864-40423913)
[»] chr3 (60 HSPs)
chr3 (452-546)||(14623845-14623939)
chr3 (452-545)||(13898061-13898154)
chr3 (452-546)||(8956762-8956856)
chr3 (452-546)||(35536626-35536720)
chr3 (360-422)||(35536750-35536812)
chr3 (452-548)||(26141538-26141634)
chr3 (452-548)||(53982009-53982105)
chr3 (452-546)||(49607414-49607508)
chr3 (452-547)||(33644199-33644294)
chr3 (364-422)||(14623757-14623815)
chr3 (361-415)||(20764830-20764884)
chr3 (452-546)||(27714897-27714991)
chr3 (360-422)||(30801647-30801709)
chr3 (452-545)||(31456690-31456783)
chr3 (478-546)||(11095385-11095453)
chr3 (363-422)||(8076517-8076576)
chr3 (364-422)||(8956886-8956944)
chr3 (452-546)||(17470405-17470499)
chr3 (477-546)||(11347953-11348022)
chr3 (477-546)||(24699985-24700054)
chr3 (477-546)||(35965805-35965874)
chr3 (452-541)||(52629305-52629394)
chr3 (478-546)||(33118883-33118951)
chr3 (478-546)||(36707456-36707524)
chr3 (478-546)||(54868927-54868995)
chr3 (452-547)||(30801739-30801834)
chr3 (452-546)||(8076393-8076487)
chr3 (452-546)||(11907371-11907465)
chr3 (360-422)||(13897969-13898031)
chr3 (477-546)||(51419391-51419460)
chr3 (364-416)||(35965700-35965752)
chr3 (478-542)||(48587123-48587187)
chr3 (363-422)||(33118767-33118826)
chr3 (456-547)||(45058563-45058653)
chr3 (452-546)||(41080709-41080801)
chr3 (452-546)||(41189770-41189864)
chr3 (364-415)||(11347840-11347891)
chr3 (463-538)||(39670019-39670094)
chr3 (368-418)||(11095289-11095339)
chr3 (477-547)||(20764946-20765016)
chr3 (361-415)||(26141445-26141499)
chr3 (368-418)||(33644328-33644378)
chr3 (364-422)||(35093709-35093767)
chr3 (360-422)||(43746463-43746525)
chr3 (362-415)||(51419276-51419329)
chr3 (478-546)||(9562999-9563067)
chr3 (452-543)||(25407153-25407245)
chr3 (292-360)||(46135640-46135707)
chr3 (478-546)||(21746213-21746283)
chr3 (360-399)||(24699869-24699908)
chr3 (360-415)||(41189678-41189733)
chr3 (358-409)||(47532002-47532053)
chr3 (364-402)||(11140961-11140999)
chr3 (700-762)||(16675764-16675826)
chr3 (292-362)||(23004868-23004937)
chr3 (362-416)||(42823241-42823295)
chr3 (362-416)||(45058469-45058523)
chr3 (452-546)||(47531865-47531959)
chr3 (368-418)||(53982139-53982189)
chr3 (505-546)||(48375765-48375806)
[»] chr6 (35 HSPs)
chr6 (452-550)||(31953036-31953134)
chr6 (361-422)||(31952945-31953006)
chr6 (452-543)||(22880664-22880755)
chr6 (452-548)||(32869676-32869772)
chr6 (452-542)||(28536494-28536582)
chr6 (452-541)||(9379718-9379807)
chr6 (452-548)||(17598552-17598648)
chr6 (364-415)||(31976379-31976430)
chr6 (456-547)||(15508034-15508125)
chr6 (456-546)||(15990052-15990142)
chr6 (364-410)||(22421997-22422043)
chr6 (456-546)||(30341370-30341460)
chr6 (452-546)||(31976248-31976342)
chr6 (456-547)||(4231547-4231638)
chr6 (368-418)||(11427746-11427796)
chr6 (292-354)||(29429694-29429756)
chr6 (368-418)||(29857955-29858005)
chr6 (480-545)||(946377-946442)
chr6 (452-546)||(11427616-11427712)
chr6 (481-546)||(22422053-22422118)
chr6 (478-547)||(31109432-31109501)
chr6 (478-546)||(31110793-31110859)
chr6 (366-418)||(28536408-28536460)
chr6 (452-543)||(23128133-23128224)
chr6 (452-546)||(6209471-6209565)
chr6 (452-546)||(12732482-12732576)
chr6 (478-555)||(15832568-15832645)
chr6 (364-416)||(4231678-4231730)
chr6 (368-416)||(22880580-22880628)
chr6 (478-546)||(29857827-29857895)
chr6 (363-415)||(30341277-30341329)
chr6 (364-415)||(15989960-15990011)
chr6 (361-415)||(15507939-15507993)
chr6 (368-418)||(17598682-17598732)
chr6 (368-418)||(32869806-32869856)
[»] chr5 (44 HSPs)
chr5 (452-546)||(33825330-33825424)
chr5 (452-545)||(16327902-16327995)
chr5 (452-546)||(2740274-2740368)
chr5 (452-548)||(14831812-14831908)
chr5 (452-548)||(28177773-28177869)
chr5 (452-548)||(42414308-42414404)
chr5 (452-543)||(18520890-18520981)
chr5 (365-422)||(33825243-33825300)
chr5 (452-557)||(36732948-36733053)
chr5 (452-548)||(40145405-40145501)
chr5 (363-422)||(31009112-31009171)
chr5 (456-546)||(2252178-2252268)
chr5 (478-547)||(35785198-35785267)
chr5 (478-546)||(15409642-15409710)
chr5 (452-548)||(33149644-33149740)
chr5 (456-546)||(3921275-3921365)
chr5 (452-546)||(6679698-6679792)
chr5 (452-546)||(13811652-13811746)
chr5 (477-547)||(26720515-26720585)
chr5 (477-547)||(26990264-26990334)
chr5 (489-545)||(36875646-36875702)
chr5 (452-547)||(6260007-6260102)
chr5 (452-546)||(9603813-9603907)
chr5 (452-546)||(20073522-20073616)
chr5 (452-546)||(35943898-35943992)
chr5 (362-415)||(26720647-26720700)
chr5 (362-415)||(26990396-26990449)
chr5 (362-422)||(2177488-2177548)
chr5 (360-412)||(6679832-6679884)
chr5 (366-422)||(35943812-35943868)
chr5 (366-421)||(9603938-9603993)
chr5 (483-541)||(10356639-10356698)
chr5 (364-415)||(15409528-15409579)
chr5 (452-546)||(31008988-31009082)
chr5 (368-418)||(33149560-33149610)
chr5 (362-415)||(3921181-3921234)
chr5 (363-415)||(2252085-2252137)
chr5 (483-546)||(39688934-39688997)
chr5 (368-418)||(2740402-2740452)
chr5 (292-354)||(8076376-8076437)
chr5 (368-418)||(14831942-14831992)
chr5 (368-418)||(18520806-18520856)
chr5 (368-418)||(35785327-35785377)
chr5 (373-418)||(13811780-13811825)
[»] chr4 (48 HSPs)
chr4 (452-547)||(11511468-11511563)
chr4 (452-546)||(50052434-50052528)
chr4 (452-546)||(480453-480547)
chr4 (467-547)||(50526192-50526272)
chr4 (452-547)||(54473539-54473634)
chr4 (452-546)||(48183055-48183149)
chr4 (452-548)||(3481652-3481748)
chr4 (452-547)||(6034043-6034138)
chr4 (480-547)||(31910191-31910258)
chr4 (452-546)||(29239886-29239980)
chr4 (452-546)||(29977885-29977979)
chr4 (452-546)||(41236347-41236441)
chr4 (361-422)||(29240010-29240071)
chr4 (479-548)||(40574777-40574846)
chr4 (452-546)||(23608235-23608329)
chr4 (452-546)||(24995113-24995207)
chr4 (364-418)||(41824010-41824064)
chr4 (452-546)||(42044373-42044467)
chr4 (452-546)||(48647732-48647826)
chr4 (481-546)||(29547994-29548059)
chr4 (481-546)||(55475191-55475256)
chr4 (368-418)||(6034172-6034222)
chr4 (456-546)||(19670726-19670816)
chr4 (452-538)||(28480274-28480360)
chr4 (452-538)||(28481149-28481235)
chr4 (452-538)||(28482024-28482110)
chr4 (452-546)||(29234251-29234345)
chr4 (368-418)||(48182971-48183021)
chr4 (362-403)||(3481787-3481828)
chr4 (481-546)||(8343198-8343263)
chr4 (362-415)||(31910323-31910376)
chr4 (366-415)||(40574910-40574959)
chr4 (360-416)||(19670630-19670686)
chr4 (363-422)||(50052345-50052404)
chr4 (363-422)||(50526088-50526147)
chr4 (456-526)||(17983753-17983823)
chr4 (368-418)||(41236475-41236525)
chr4 (472-546)||(50813918-50813992)
chr4 (363-416)||(29547876-29547929)
chr4 (481-546)||(32766958-32767023)
chr4 (477-546)||(47104544-47104613)
chr4 (481-546)||(55079749-55079814)
chr4 (364-416)||(55475321-55475373)
chr4 (361-416)||(18924410-18924465)
chr4 (368-418)||(24995029-24995079)
chr4 (456-538)||(29589750-29589831)
chr4 (292-354)||(48525447-48525508)
chr4 (477-546)||(32939688-32939756)
[»] chr7 (60 HSPs)
chr7 (452-550)||(19329838-19329936)
chr7 (452-547)||(38267039-38267134)
chr7 (452-546)||(8080389-8080483)
chr7 (452-546)||(36361919-36362013)
chr7 (478-546)||(19436219-19436287)
chr7 (452-546)||(3434562-3434656)
chr7 (452-546)||(7389389-7389483)
chr7 (452-546)||(36362026-36362120)
chr7 (364-415)||(46033719-46033770)
chr7 (478-548)||(21234399-21234469)
chr7 (452-548)||(35137531-35137627)
chr7 (452-556)||(38837207-38837311)
chr7 (363-415)||(46374741-46374793)
chr7 (455-546)||(26296644-26296735)
chr7 (360-415)||(35523007-35523062)
chr7 (456-546)||(22343361-22343451)
chr7 (481-547)||(32564461-32564527)
chr7 (364-422)||(41423806-41423864)
chr7 (452-546)||(46374808-46374902)
chr7 (373-418)||(19436114-19436159)
chr7 (477-546)||(46033832-46033901)
chr7 (452-548)||(3694365-3694461)
chr7 (363-415)||(21234532-21234584)
chr7 (452-543)||(3783998-3784089)
chr7 (475-546)||(10343592-10343663)
chr7 (368-418)||(4999436-4999486)
chr7 (452-546)||(4999520-4999614)
chr7 (452-546)||(18207180-18207273)
chr7 (477-547)||(39255954-39256024)
chr7 (456-546)||(41915741-41915831)
chr7 (452-517)||(16374830-16374895)
chr7 (489-546)||(35468898-35468955)
chr7 (452-541)||(35522881-35522970)
chr7 (481-546)||(38044197-38044262)
chr7 (489-546)||(40846156-40846213)
chr7 (478-546)||(40957707-40957775)
chr7 (368-418)||(8080305-8080355)
chr7 (292-354)||(13768490-13768552)
chr7 (365-415)||(16374743-16374793)
chr7 (368-418)||(19329970-19330020)
chr7 (292-354)||(28713798-28713859)
chr7 (494-548)||(31735882-31735936)
chr7 (456-548)||(8238210-8238303)
chr7 (497-546)||(11044188-11044237)
chr7 (452-545)||(32951499-32951592)
chr7 (360-416)||(8238343-8238399)
chr7 (362-422)||(27744225-27744285)
chr7 (363-415)||(31736008-31736060)
chr7 (368-416)||(32951415-32951463)
chr7 (368-416)||(36362144-36362192)
chr7 (364-416)||(38044327-38044379)
chr7 (366-409)||(39255844-39255887)
chr7 (368-418)||(3434680-3434730)
chr7 (364-422)||(35468773-35468831)
chr7 (452-546)||(36208173-36208267)
chr7 (292-354)||(38349459-38349520)
chr7 (368-418)||(40957835-40957885)
chr7 (368-409)||(36361847-36361888)
chr7 (301-354)||(37536323-37536376)
chr7 (366-415)||(41915872-41915921)
[»] chr2 (54 HSPs)
chr2 (452-546)||(9058480-9058574)
chr2 (452-548)||(13438341-13438437)
chr2 (452-546)||(7465741-7465835)
chr2 (452-546)||(10249388-10249482)
chr2 (452-546)||(32505654-32505748)
chr2 (452-546)||(33436211-33436305)
chr2 (452-550)||(40613908-40614006)
chr2 (452-543)||(28863458-28863549)
chr2 (452-546)||(5574494-5574588)
chr2 (452-546)||(30915463-30915557)
chr2 (452-546)||(33436106-33436200)
chr2 (452-549)||(19930826-19930923)
chr2 (456-548)||(43490119-43490211)
chr2 (452-546)||(17473020-17473114)
chr2 (364-422)||(20700939-20700997)
chr2 (452-546)||(26891510-26891604)
chr2 (478-547)||(4060684-4060753)
chr2 (478-547)||(40701477-40701546)
chr2 (452-548)||(27864702-27864798)
chr2 (452-547)||(17820010-17820105)
chr2 (452-546)||(20700815-20700909)
chr2 (478-548)||(28381687-28381757)
chr2 (456-546)||(38732354-38732444)
chr2 (452-546)||(42257193-42257287)
chr2 (363-415)||(40613819-40613871)
chr2 (368-418)||(10249304-10249354)
chr2 (452-545)||(41575138-41575232)
chr2 (456-546)||(45097745-45097835)
chr2 (465-546)||(38882833-38882913)
chr2 (478-546)||(17823784-17823852)
chr2 (361-401)||(33436346-33436386)
chr2 (478-546)||(38273174-38273242)
chr2 (364-415)||(36168967-36169018)
chr2 (360-415)||(41758718-41758773)
chr2 (456-526)||(2997497-2997567)
chr2 (368-418)||(32505570-32505620)
chr2 (368-418)||(38882733-38882783)
chr2 (477-546)||(36168836-36168905)
chr2 (478-546)||(2533124-2533191)
chr2 (363-415)||(2533254-2533306)
chr2 (363-415)||(17823919-17823971)
chr2 (375-418)||(33436029-33436072)
chr2 (362-412)||(3440113-3440163)
chr2 (368-418)||(5574422-5574472)
chr2 (368-418)||(7465657-7465707)
chr2 (368-418)||(13438471-13438521)
chr2 (368-418)||(17473148-17473198)
chr2 (368-418)||(19930742-19930792)
chr2 (368-418)||(28863583-28863633)
chr2 (292-354)||(40216530-40216591)
chr2 (363-416)||(13365483-13365536)
chr2 (481-546)||(15428775-15428840)
chr2 (624-657)||(40095267-40095300)
chr2 (366-399)||(41575275-41575308)
[»] chr1 (53 HSPs)
chr1 (452-548)||(27564741-27564837)
chr1 (452-546)||(2581915-2582009)
chr1 (360-420)||(11152292-11152352)
chr1 (452-547)||(9474882-9474977)
chr1 (452-546)||(32813247-32813341)
chr1 (452-546)||(51898689-51898783)
chr1 (452-548)||(3302539-3302635)
chr1 (477-548)||(37649196-37649267)
chr1 (452-547)||(48716288-48716383)
chr1 (452-546)||(3000319-3000413)
chr1 (477-546)||(23597122-23597191)
chr1 (452-548)||(47452326-47452422)
chr1 (364-415)||(32813378-32813429)
chr1 (452-543)||(44548382-44548473)
chr1 (360-415)||(45044474-45044529)
chr1 (456-547)||(50591010-50591101)
chr1 (452-546)||(43132-43226)
chr1 (452-546)||(38595154-38595248)
chr1 (452-546)||(38632327-38632421)
chr1 (481-547)||(41608528-41608594)
chr1 (478-546)||(49811559-49811627)
chr1 (477-548)||(26440732-26440803)
chr1 (456-546)||(5959010-5959100)
chr1 (452-546)||(8346394-8346488)
chr1 (368-418)||(41758933-41758983)
chr1 (452-546)||(50630458-50630552)
chr1 (457-546)||(7740733-7740822)
chr1 (452-548)||(6260868-6260964)
chr1 (452-520)||(13414787-13414855)
chr1 (375-418)||(50630586-50630629)
chr1 (368-418)||(27564657-27564707)
chr1 (368-418)||(37649326-37649376)
chr1 (368-418)||(48716204-48716254)
chr1 (366-404)||(49811447-49811485)
chr1 (364-422)||(51898601-51898659)
chr1 (292-361)||(526909-526977)
chr1 (477-546)||(37926469-37926538)
chr1 (364-412)||(6261004-6261052)
chr1 (309-353)||(26041093-26041137)
chr1 (478-546)||(41758805-41758873)
chr1 (364-404)||(44454125-44454165)
chr1 (364-415)||(37926356-37926407)
chr1 (481-548)||(47748441-47748507)
chr1 (362-416)||(5958916-5958970)
chr1 (368-418)||(9474798-9474848)
chr1 (292-362)||(13276474-13276543)
chr1 (291-361)||(46845665-46845734)
chr1 (292-354)||(47571563-47571624)
chr1 (362-416)||(47748572-47748626)
chr1 (577-618)||(26041019-26041060)
chr1 (301-354)||(29731309-29731362)
chr1 (452-541)||(44453984-44454073)
chr1 (714-759)||(49762468-49762513)
[»] scaffold0110 (1 HSPs)
scaffold0110 (362-415)||(8779-8832)
[»] scaffold1268 (2 HSPs)
scaffold1268 (478-548)||(961-1031)
scaffold1268 (365-422)||(848-905)
[»] scaffold1267 (2 HSPs)
scaffold1267 (478-548)||(961-1031)
scaffold1267 (365-422)||(848-905)
[»] scaffold0321 (1 HSPs)
scaffold0321 (452-546)||(10115-10209)
[»] scaffold0237 (2 HSPs)
scaffold0237 (368-418)||(4157-4207)
scaffold0237 (478-546)||(4029-4097)
[»] scaffold0316 (1 HSPs)
scaffold0316 (360-411)||(17238-17289)
[»] scaffold0018 (1 HSPs)
scaffold0018 (467-526)||(152518-152577)


Alignment Details
Target: chr8 (Bit Score: 337; Significance: 0; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 11 - 422
Target Start/End: Original strand, 42354171 - 42354564
Alignment:
Q  11 tttggtgttgcatgcagagagcaaagggctcctcatatcattgtacattgagcaaatgactctcttcaaggagtgtcgttgtatgcaaagagcaaaacat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42354171 tttggtgttgcatgcagagagcaaagggctcctcatatcattgtacattgagcaaatgactctcttcaaggagtgtcgttgtatgcaaagagcaaaacat 42354270  T
Q  111 tcggtccaaatataaatcatgatgttacttagttcaaaccgccttccccaaagatgaagtacaacattgattgtgcactttttaacaacaattctatcat 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42354271 tcggtccaaatataaatcatgatgttacttagttcaaaccgccttccccaaagatgaagtgcaacattgattgtgcactttttaacaacaattctatcat 42354370  T
Q  211 gggttcttagggtggccctaagcatgggcggatggatggtcgcttagggcaccaactttttagggtcaacagnnnnnnnagggataatgttttcatggac 310  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||                  ||||| |||||||||||||||    
T  42354371 gggttcttagggtggccctaagcatgggcggatggatgatcgcctagggcaccaacttttt------------------agggaaaatgttttcatggac 42354452  T
Q  311 acctttttctccatacacatattgtaccacctccatgtgagagtatgtgaaaaggaaaatgttacatagacaccatttattctcatacacccttctacac 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42354453 acctttttctccatacacatattgtaccacctccatgtgagagtatgtgaaaaggaaaatgttacatagacaccatttattctcatacacccttctacac 42354552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 700 - 1106
Target Start/End: Original strand, 42354731 - 42355128
Alignment:
Q  700 taactcatttttactaattctattgtaaatatatttttagagaatcttgattacaaatgaatcatctataacnnnnnnnnnnnnggaataaaaagatatt 799  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||| ||||||            | ||||||||||||||    
T  42354731 taactcacttttactaattctattgaaaatatatttttagaaaatattaattacaaatgaatcatttataacaaaaaaaaaatag-aataaaaagatatt 42354829  T
Q  800 tcaataattaaaatgacacaactttattagtttgtgcaggttatgcctgacatttcaatgattctacaaggattattgtggatatgcaaactacgcattc 899  Q
     ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42354830 ccaataattaaaattacacaactttattagtttgtgcaggttatgctt-acatttcaatgattctacaaggattattgtggatatgcaaactacgcattc 42354928  T
Q  900 tatagcatctcttctacatagggagaagccttaggcttcctcgaggctatcaaattttatgttgcacaattctgcaatctcttatctttgagtcgattgt 999  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42354929 tatagcatctcttctacatagggagaagccttaggcttccttgaggctatcaaattttatgttgcacaattctgcaatctcttatctttgagtcgattgt 42355028  T
Q  1000 aaaattgtaattgatgttgttaattgttaatttatcacgtgttcctcgtaatgaaattcgatattattactagacataaagatttgttttagttgtgagt 1099  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  42355029 aaaattgtaattgatg-------ttgttaatttatcacgtgttcctcgtaatgaaattcgatattataactagatataaagatttgttttatttgtgagt 42355121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 12831141 - 12831047
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  12831141 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 504127 - 504223
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||    
T  504127 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcat 504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 15197427 - 15197331
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||  |||||||||||||||||||||    
T  15197427 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 477 - 548
Target Start/End: Original strand, 20074965 - 20075036
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||||| | ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  20074965 cacgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactcat 20075036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 40423949 - 40424044
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| | |||||||||||  |||||||||| |||| ||||| |||||| |||||||||| ||||||||| | ||||||||||||||||||    
T  40423949 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 8841350 - 8841408
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactag 8841408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 37038573 - 37038479
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  37038573 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 42221609 - 42221515
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||| || |||||| ||||  |||||||||| |||| |||||||||| |||  ||||||||||||||||||||| |||||||||||||||    
T  42221609 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 467 - 546
Target Start/End: Original strand, 1179961 - 1180040
Alignment:
Q  467 tccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||  |||||||||| |||| |||||||||||| |||||||||  ||||||||| |||||||||||||||||||    
T  1179961 tccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 478 - 545
Target Start/End: Complemental strand, 5957898 - 5957831
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||||||||| |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  5957898 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 14548016 - 14547922
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||| ||||||||| |||||||||||| ||||||    
T  14548016 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 23122603 - 23122699
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||| || | ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||| ||| ||||| |||||||||||||||||||||    
T  23122603 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactcat 23122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 34012302 - 34012398
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | | ||||| |||  |||||||| | |||| |||||||||||| |||||||||  ||||||||| |||||||||||||||||||||    
T  34012302 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 34012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 483 - 546
Target Start/End: Original strand, 4854900 - 4854963
Alignment:
Q  483 tcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||| |||||||| ||||| || |||||||||| |||||||||||||||||||||||||||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 478 - 541
Target Start/End: Original strand, 10621119 - 10621182
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcat 541  Q
    |||||||||| |||| |||||||||||| |||||||||  ||||||||||||||||||||||||    
T  10621119 acgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 10284549 - 10284607
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactag 10284607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 10284637 - 10284731
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||| | |||| |||||||||||| | |||||||||||| ||||| |||||||||||||| ||||    
T  10284637 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 12831225 - 12831175
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgca 12831175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 16056411 - 16056501
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||    
T  16056411 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 546
Target Start/End: Complemental strand, 16383467 - 16383377
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  16383467 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 365 - 422
Target Start/End: Complemental strand, 5958011 - 5957954
Alignment:
Q  365 gaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactag 5957954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 15048214 - 15048282
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| |||| ||||| |||||| |||||||||| |||||||||||||||||||||||| |||||    
T  15048214 acgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 457 - 546
Target Start/End: Complemental strand, 17443914 - 17443825
Alignment:
Q  457 ttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||||||||||  || ||||||| |||| |||| |||| |||  |||||||||||||||||| |||||||||||||| ||||    
T  17443914 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 34307281 - 34307216
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 43414587 - 43414683
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | | ||||  ||| ||||||| ||| |||| |||||||||||| |||||| ||| || ||||||||||||||||||||| ||||||    
T  43414587 tgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactcat 43414683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 504043 - 504093
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgca 504093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 23122519 - 23122569
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgca 23122569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 44507106 - 44507187
Alignment:
Q  465 ggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||  |||||||||| |||| ||||||||| || | |||||||  ||||||||| |||||||||||||||||||    
T  44507106 ggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 621 - 661
Target Start/End: Original strand, 42354661 - 42354701
Alignment:
Q  621 tgcggtacatgtcatctaaggtggtatatgtatcacttccc 661  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  42354661 tgcgatacatgtcatctaaggtggtatatgtatcacttccc 42354701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 43414498 - 43414550
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||| ||||||  ||||||||||| ||||||||||    
T  43414498 aggaaaatgttacatagacaccctttattgccatacacccttgtacaccccat 43414550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 483 - 546
Target Start/End: Original strand, 24307830 - 24307893
Alignment:
Q  483 tcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||| |||| ||||||||||||||| ||||||| ||||||||| ||| |||||||||| ||||    
T  24307830 tcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 11905035 - 11904974
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||||||| |||| ||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  11905035 ggataatgttt-catgaacacccttttctctatacacacattgtaccacttccatgtgagagt 11904974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 708 - 762
Target Start/End: Complemental strand, 26835663 - 26835609
Alignment:
Q  708 ttttactaattctattgtaaatatatttttagagaatcttgattacaaatgaatc 762  Q
    ||||| ||||||||||| ||||||||||||||||||  ||||||| |||||||||    
T  26835663 ttttattaattctattgaaaatatatttttagagaactttgattataaatgaatc 26835609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 34012218 - 34012268
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||| ||||||||| |||||||||||||    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgca 34012268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 37038661 - 37038603
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||| ||||| ||||||   |||||||||| |||||||||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactag 37038603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 14055635 - 14055692
Alignment:
Q  489 ttttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||| ||||| |||||||| |||||||||||||||||| |||| ||||||||| ||||    
T  14055635 ttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 32707921 - 32707973
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 32707973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 791 - 827
Target Start/End: Original strand, 33972195 - 33972231
Alignment:
Q  791 aaagatatttcaataattaaaatgacacaactttatt 827  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33972195 aaagatattttaataattaaaatgacacaactttatt 33972231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 714 - 762
Target Start/End: Original strand, 41849447 - 41849495
Alignment:
Q  714 taattctattgtaaatatatttttagagaatcttgattacaaatgaatc 762  Q
    ||||||||||| ||||||||||||| |||||||||||||  ||||||||    
T  41849447 taattctattgaaaatatatttttaaagaatcttgattattaatgaatc 41849495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 42110615 - 42110548
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagtatgtga 360  Q
    ||||||||||| ||| |||| ||||||||| ||||||| | ||||||| ||||||||||||| ||||||    
T  42110615 ggataatgttt-cattgacatctttttctctatacacagagtgtaccatctccatgtgagagcatgtga 42110548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 714 - 762
Target Start/End: Original strand, 43872573 - 43872621
Alignment:
Q  714 taattctattgtaaatatatttttagagaatcttgattacaaatgaatc 762  Q
    ||||||||||||||||||||||||| ||||  ||||||| |||||||||    
T  43872573 taattctattgtaaatatatttttaaagaactttgattataaatgaatc 43872621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 4854781 - 4854832
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||  |||||||||||| |||||| |||| |||||    
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccat 4854832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 24307692 - 24307629
Alignment:
Q  483 tcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||| |||| |||||||||||| || ||||||| ||||||||| ||| |||||||||| ||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 526
Target Start/End: Original strand, 8841438 - 8841512
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaagg 526  Q
    |||||||||| | ||||||| |||  |||||| ||| |||| |||||||||||| ||||||| || |||||||||    
T  8841438 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 507 - 545
Target Start/End: Complemental strand, 9122234 - 9122196
Alignment:
Q  507 gggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  9122234 gggtgtattgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 14548100 - 14548050
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgca 14548050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 15258935 - 15259029
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||   ||||||| ||| ||| ||||||| |||||||||| |||| |||| ||||||| || |||||  | |||||||||||| ||||    
T  15258935 tgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 20074869 - 20074907
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacc 401  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  20074869 aggaaaatgttacatagacacattttattctcatacacc 20074907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 35200738 - 35200677
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    |||||||||||  ||| ||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  35200738 ggataatgtttg-atgaacacccttttctctatacacacattgtaccacttccatgtgagagt 35200677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 42354594 - 42354636
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttat 494  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||    
T  42354594 tgtgcttatgtgagatccacatgaacacgtgtcagatttttat 42354636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 44507010 - 44507059
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| ||||||||||  |||||||||||||||||||| |||||||||||||    
T  44507010 aatgatacatagacat-atttattctcatacacccttgtacaccccatgca 44507059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 16056322 - 16056371
Alignment:
Q  367 aaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 16056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 367 - 416
Target Start/End: Original strand, 40423864 - 40423913
Alignment:
Q  367 aaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||| |||||||||||| ||||||| ||||||||||| |||||| ||||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatg 40423913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 9e-39; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 14623845 - 14623939
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14623845 tgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 452 - 545
Target Start/End: Original strand, 13898061 - 13898154
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  13898061 tgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 8956856 - 8956762
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||||||||||||||||||||| | ||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||    
T  8956856 tgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 35536720 - 35536626
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||||||||||| ||||||||| | |||||||||||||||||  ||||||||| ||| |||||||||||||||||||||||||    
T  35536720 tgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 35536812 - 35536750
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35536812 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 35536750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 26141538 - 26141634
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||||| ||||||  ||| ||||||||||| |||| ||||||||| || |||||||||| |||||||||||||||||||||||| ||||||    
T  26141538 tgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcat 26141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 53982105 - 53982009
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  53982105 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcat 53982009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 49607508 - 49607414
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| | ||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  49607508 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 33644294 - 33644199
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| |||| |||| ||||||||||||||||||||    
T  33644294 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 14623757 - 14623815
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactag 14623815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 20764830 - 20764884
Alignment:
Q  361 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20764830 aaaggaaaatgttacatagacaccatttattctcatacacccttgtacaccccat 20764884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 27714897 - 27714991
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | |||||||||||  |||||||||| |||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||    
T  27714897 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 30801647 - 30801709
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  30801647 aaaaggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactag 30801709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 31456783 - 31456690
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||||||||| | |||||||||||  |||||||||| |||| |||||||||||| |||||||||| | |||| || ||||||||||||||||||    
T  31456783 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 11095385 - 11095453
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  11095385 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 363 - 422
Target Start/End: Complemental strand, 8076576 - 8076517
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  8076576 aggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactag 8076517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 8956944 - 8956886
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactag 8956886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 17470499 - 17470405
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| ||||||| |||  |||||||||| |||| ||||||||| ||  ||||||||| ||||||| | |||||||||||||||||||    
T  17470499 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 11347953 - 11348022
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||| ||||| |||||| || |||||||||||||||||||||||||||||||| ||||    
T  11347953 cacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 24699985 - 24700054
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| |||| |||||||||||||||||  ||||||||| || ||||||||||||||||||||||||||    
T  24699985 cacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 35965805 - 35965874
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| ||||||||||||||||| || |||||| |||| ||||||||| |||||||||||||||    
T  35965805 cacgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 52629394 - 52629305
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcat 541  Q
    |||||||||  | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  52629394 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 33118883 - 33118951
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||| | |||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  33118883 acgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 36707456 - 36707524
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||| |||||| |||||||||||||||||||| | |||||||||||||||||    
T  36707456 acgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 54868927 - 54868995
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||||||||||  ||||||||| ||||||||| |||||||||||||||||||    
T  54868927 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 30801739 - 30801834
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||||| |||||| ||||  || ||||| | |||| ||||||| |||| ||||||||| |||||||||| ||||||||||||||| ||||    
T  30801739 tgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcattgctca 30801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 8076487 - 8076393
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||| ||| |||| |||||||||||| ||||||| || ||||||||| ||| |||||||||||||||    
T  8076487 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 11907465 - 11907371
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | |||||| |||| ||| ||||||| |||| |||| ||||  ||| |||||||||||||||||| |||||||||||||| ||||    
T  11907465 tgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 360 - 422
Target Start/End: Original strand, 13897969 - 13898031
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||| ||||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||    
T  13897969 aaaagaaaaatgttagatagacaccatttattctcatacacttttctacaccccatacactag 13898031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 51419391 - 51419460
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||| ||||||||| || || |||||||||| ||||||||||||||||||||| ||||    
T  51419391 cacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 35965700 - 35965752
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatg 35965752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 478 - 542
Target Start/End: Original strand, 48587123 - 48587187
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatt 542  Q
    |||||||||| |||||||| |||||||| |||||||||| ||||||||| | |||||||||||||    
T  48587123 acgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 363 - 422
Target Start/End: Original strand, 33118767 - 33118826
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||| |||||||| ||||||  ||||||||||| |||||||||||||||||    
T  33118767 aggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactag 33118826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 456 - 547
Target Start/End: Original strand, 45058563 - 45058653
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||| | |||||| |||  ||| ||||||| ||||||||||||||||| |||||||||| ||||||||| ||| |||||||||| |||||    
T  45058563 cttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 41080801 - 41080709
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| ||||||||||| ||| | ||||| ||||  ||||||||||| |||||| |||  || |||||||||||||||||||||||||    
T  41080801 tgtgcttgtgtg-ggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 41189770 - 41189864
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||  ||  ||||||||| | |||||||||||||||||  | ||||||| ||||||||||||| |||||||||| ||||    
T  41189770 tgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 11347840 - 11347891
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||| |||||||||||| ||||||| ||||||||||| ||||||||||    
T  11347840 ggaaaatggtacatagacaccctttattcccatacacccttatacaccccat 11347891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 463 - 538
Target Start/End: Complemental strand, 39670094 - 39670019
Alignment:
Q  463 gaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtat 538  Q
    ||||||||||||| ||||||||| | |||||| | | ||||||||| | ||||| ||| |||||||||||||||||    
T  39670094 gaggtccacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacataaggatgtctatgtat 39670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 11095289 - 11095339
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||| |||||    
T  11095289 aatgatacatagacaccctttattctcatacacccttgtacacccgatgca 11095339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 477 - 547
Target Start/End: Original strand, 20764946 - 20765016
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||||||||| |||| ||||||||| || | |||||||  ||||||||||||||||||| |||| |||||    
T  20764946 cacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 26141445 - 26141499
Alignment:
Q  361 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||||| ||||||  ||||||| ||| ||||||||||    
T  26141445 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacaccccat 26141499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 33644378 - 33644328
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgca 33644328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 35093767 - 35093709
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||| |||||| |||||||||||||||||| || |||| | ||||||||||    
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactag 35093709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 43746525 - 43746463
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||| ||||||||||||| ||||| ||| || |||||||||||| |||||| ||||||||||    
T  43746525 aaaagaaaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactag 43746463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 51419276 - 51419329
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||| ||||| ||||||  ||||||||||| ||||||||||    
T  51419276 aaggaaaatgttacataaacaccttttatttccatacacccttgtacaccccat 51419329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 9563067 - 9562999
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||||| ||| |||||| || |||||||||| |||| | ||| |||||||||||||||    
T  9563067 acgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 25407153 - 25407245
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaatttta-tgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatta 543  Q
    |||| ||||||| | |||| |||| ||||||||||| ||||  |||| |||||||||||| ||||| |||||| || ||| ||||||||||||    
T  25407153 tgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 292 - 360
Target Start/End: Complemental strand, 46135707 - 46135640
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagtatgtga 360  Q
    ||||||||||| |||| ||| | ||||||||||||||| ||||||||||| | |||||||||| |||||    
T  46135707 ggataatgttt-catgaacatcattttctccatacacacattgtaccacccctatgtgagagtgtgtga 46135640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 21746213 - 21746283
Alignment:
Q  478 acgtgtcagaattttatgtggg--tgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||||  |||| |||  ||||||| ||||||||||||| |||||||||||||||    
T  21746213 acgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactc 21746283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 24699869 - 24699908
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcataca 399  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  24699869 aaaaggaaaatgttacatagacatcttttattctcataca 24699908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 41189678 - 41189733
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||||||| ||||||  ||||||| ||| ||||| ||||    
T  41189678 aaaaggaaaatgttacatagacaccctttatttccatacactcttgtacactccat 41189733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 47532053 - 47532002
Alignment:
Q  358 tgaaaaggaaaatgttacatagacaccatttattctcatacacccttctaca 409  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||| ||| ||||    
T  47532053 tgaaaaggaaaatgttacataaacaccctttattcccatacacacttgtaca 47532002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 11140961 - 11140999
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacaccc 402  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  11140961 ggaaaatgttacatagacaccctttagtctcatacaccc 11140999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 700 - 762
Target Start/End: Complemental strand, 16675826 - 16675764
Alignment:
Q  700 taactcatttttactaattctattgtaaatatatttttagagaatcttgattacaaatgaatc 762  Q
    ||||||||||| | ||||| |||||  |||||||||||| | ||| |||||||||||||||||    
T  16675826 taactcattttaattaattttattgagaatatatttttaaataattttgattacaaatgaatc 16675764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 23004937 - 23004868
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagtatgtgaaa 362  Q
    ||||||||||| |||| ||||| |||||||||||||||   || ||||| ||||||||||||| |||||||    
T  23004937 ggataatgttt-catgaacacccttttctccatacacactatgcaccacttccatgtgagagtgtgtgaaa 23004868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 42823295 - 42823241
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||||| |||| |  ||||||||||| |||||| ||||    
T  42823295 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatg 42823241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 45058469 - 45058523
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||||| |||| |  |||||||| || |||||||||||    
T  45058469 aaggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatg 45058523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 47531959 - 47531865
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||| || |||  ||||||||||| | || ||||| ||| ||  ||||||||| || ||||||||||||||||||||| ||||    
T  47531959 tgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 53982189 - 53982139
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgca 53982139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 505 - 546
Target Start/End: Original strand, 48375765 - 48375806
Alignment:
Q  505 aggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||||||||||||| |||||||| ||||| ||||    
T  48375765 aggggtgtattgtcacctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 2e-36; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 452 - 550
Target Start/End: Original strand, 31953036 - 31953134
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcatgt 550  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  31953036 tgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactcatgt 31953134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 31952945 - 31953006
Alignment:
Q  361 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31952945 aaaggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactag 31953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 22880664 - 22880755
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatta 543  Q
    |||||||||| | ||||||| |||  ||||||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  22880664 tgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 32869772 - 32869676
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||    
T  32869772 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactcat 32869676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 452 - 542
Target Start/End: Original strand, 28536494 - 28536582
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatt 542  Q
    |||||||||||| ||||||||||| |  |||||||| |||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  28536494 tgtgcttgtgtggggtccacatgacc--gtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 452 - 541
Target Start/End: Original strand, 9379718 - 9379807
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcat 541  Q
    |||| ||||||||| ||||||||  ||||||||| | |||| | ||||||||||||| |||||||||| |||||||||||||||||||||    
T  9379718 tgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 17598648 - 17598552
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  | ||||||| ||||||||| |||||||||||||||||||||    
T  17598648 tgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactcat 17598552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 31976430 - 31976379
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccat 31976379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 456 - 547
Target Start/End: Original strand, 15508034 - 15508125
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||    
T  15508034 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 15990052 - 15990142
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  15990052 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 364 - 410
Target Start/End: Original strand, 22421997 - 22422043
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacac 410  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 30341370 - 30341460
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  30341370 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 31976342 - 31976248
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||| ||  ||| ||||||||||| |||| ||||||||| || |||| ||||| |||||||||||||||||||||||| ||||    
T  31976342 tgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 456 - 547
Target Start/End: Complemental strand, 4231638 - 4231547
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||| | |||||| |||  ||||||||||| |||| |||||||| |||||||||||||| ||||||| ||||| |||| ||||| |||||    
T  4231638 cttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 11427796 - 11427746
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgca 11427746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 29429756 - 29429694
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    |||||||||||||||  ||||| |||||||| |||| ||||||||||||||| ||||||||||    
T  29429756 ggataatgttttcataaacacccttttctccgtacatatattgtaccacctctatgtgagagt 29429694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 29858005 - 29857955
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgca 29857955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 480 - 545
Target Start/End: Complemental strand, 946442 - 946377
Alignment:
Q  480 gtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||||||| ||||  || |||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  946442 gtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 11427712 - 11427616
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcaccta--aggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||| |||| |||||||||||| || ||||||| ||||||  ||| |||||||||||||||||||    
T  11427712 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 481 - 546
Target Start/End: Original strand, 22422053 - 22422118
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| | || |||||||| | | ||||| |||||||||||||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactc 22422118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 31109432 - 31109501
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| |||| ||||| |||||| |||||||||| ||||||||| |||||||  |||||||||||    
T  31109432 acgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 31110793 - 31110859
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| ||||  ||| ||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  31110793 acgtgtcagattttt--gtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 28536408 - 28536460
Alignment:
Q  366 aaaatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||||||||||| |||| |||||||| |||||||||||| |||||||||||||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgca 28536460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 23128133 - 23128224
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatta 543  Q
    |||||||||||| | ||||| |||  |||||||||| |||| |||||||||||| || |||||| |||| ||| | ||||||| ||||||||    
T  23128133 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 6209471 - 6209565
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| ||| | ||||||| |||  ||||| |||| |||| |||| |||||||   |||||||| ||||||||| |||||||||||||||||||    
T  6209471 tgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 12732576 - 12732482
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| | |||||||   ||||||||||| |||| |||||||||||| |  | ||||| ||| |||| ||||||||||||||||||||    
T  12732576 tgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 478 - 555
Target Start/End: Complemental strand, 15832645 - 15832568
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcatgtgaaaa 555  Q
    |||||||| | |||| ||||||||||||  | | ||||||||||||| | ||||||||||||||||||| | ||||||    
T  15832645 acgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactcttttgaaaa 15832568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 4231730 - 4231678
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 4231678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 22880580 - 22880628
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||| |||||| ||||||||||||| ||||||||||| |||||||||||    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatg 22880628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 29857895 - 29857827
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||||||| ||  ||||||||| || |||| | |||||||||||||||||||    
T  29857895 acgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 30341277 - 30341329
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||||||||||    
T  30341277 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 30341329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 15989960 - 15990011
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||| |||| |  ||||||||||| ||||||||||    
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 15990011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 15507939 - 15507993
Alignment:
Q  361 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||||| |||| |  |||||| |||| ||||||||||    
T  15507939 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccat 15507993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 17598732 - 17598682
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||  ||||||||||| |||||||||||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgca 17598682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 32869856 - 32869806
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgca 32869806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 3e-29; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 33825330 - 33825424
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  33825330 tgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 16327995 - 16327902
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||||||| | ||| ||||||||||    
T  16327995 tgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 2740368 - 2740274
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  2740368 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 14831908 - 14831812
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | | ||||| |||  |||||||||| ||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||    
T  14831908 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 14831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 28177869 - 28177773
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||| ||||| | ||||||  ||| ||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  28177869 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcat 28177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 42414308 - 42414404
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | |||||||||||  |||||||||| |||| |||||||||||| |||||||||| ||||||  | |||||||||||||||||||||    
T  42414308 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactcat 42414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 18520890 - 18520981
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatta 543  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  18520890 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 33825243 - 33825300
Alignment:
Q  365 gaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactag 33825300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 452 - 557
Target Start/End: Original strand, 36732948 - 36733053
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcatgtg 551  Q
    |||||||||| | ||||||| |||  | |||||||| |||| |||||||||||| ||||||||||  |||||||| ||||||||||||||||||| | ||    
T  36732948 tgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactcttctg 36733047  T
Q  552 aaaaac 557  Q
    ||||||    
T  36733048 aaaaac 36733053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 40145501 - 40145405
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||| ||| || |||||||||| ||||||||| |||||||||||||||||||||    
T  40145501 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactcat 40145405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 363 - 422
Target Start/End: Complemental strand, 31009171 - 31009112
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||    
T  31009171 aggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactag 31009112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 2252178 - 2252268
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  2252178 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 35785267 - 35785198
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| |||| ||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  35785267 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 15409642 - 15409710
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| |||||||||||| |  |||||||||||||||||||||||||||||||| ||||    
T  15409642 acgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 33149644 - 33149740
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | | ||||| |||  |||||||| | |||| |||||||||||| |||||||||  ||||||||| |||||||||||||||||||||    
T  33149644 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 33149740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 3921275 - 3921365
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  3921275 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 6679792 - 6679698
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||| ||||| | ||||||  ||| ||||||||||| |||| ||||||||||||  ||||||||| ||||||| |||||||||||||||| ||||    
T  6679792 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 13811746 - 13811652
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  | ||||||| ||||||||| |||||||||||| ||||||    
T  13811746 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 477 - 547
Target Start/End: Complemental strand, 26720585 - 26720515
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||||||||| |||| ||| ||||| || |||||||||| |||||||||||||||||||||||| |||||    
T  26720585 cacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 477 - 547
Target Start/End: Complemental strand, 26990334 - 26990264
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||||||||| |||| ||| ||||| || |||||||||| |||||||||||||||||||||||| |||||    
T  26990334 cacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 36875646 - 36875702
Alignment:
Q  489 ttttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  36875646 ttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 6260007 - 6260102
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||||| |||||||||||  ||| || |||| ||| ||||  |||||||| || ||||||||||||||||| || ||| ||||||||||||||||    
T  6260007 tgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 9603907 - 9603813
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||| |||| || |||||| |||| || |||||||| |||| ||| ||||| || | ||||||| |||||||||||||| |||||||||||||||    
T  9603907 tgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactc 9603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 20073522 - 20073616
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||   ||||||| ||  ||||||  ||| ||||||||| ||||||| ||||||||||||| |||| ||||||||| |||||||||||    
T  20073522 tgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 35943898 - 35943992
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| | ||||| | |  |||||||||| |||| ||||||||||||  | ||||||| ||||||||| |||||||||||||| ||||    
T  35943898 tgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 26720700 - 26720647
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  26720700 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccat 26720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 26990449 - 26990396
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  26990449 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccat 26990396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 362 - 422
Target Start/End: Complemental strand, 2177548 - 2177488
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||| ||||||  ||||||||||||||||||| |||| || |||||||||    
T  2177548 aaggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactag 2177488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 6679884 - 6679832
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccc 412  Q
    |||| |||||||||||||||||| |||||||| |||||||||||| |||||||    
T  6679884 aaaaagaaaatgttacatagacatcatttattgtcatacacccttgtacaccc 6679832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 366 - 422
Target Start/End: Original strand, 35943812 - 35943868
Alignment:
Q  366 aaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||  ||||||  ||||||||||| |||||||||||||||||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactag 35943868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 366 - 421
Target Start/End: Complemental strand, 9603993 - 9603938
Alignment:
Q  366 aaaatgttacatagacaccatttattctcatacacccttctacaccccatgcacta 421  Q
    |||||||||| ||||||||||||||||||||||||| || |||| |||| ||||||    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcacta 9603938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 483 - 541
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  483 tcagaattttatgtgggtgtcaagggg-tgtattgtcacctaaggatgtctatgtatcat 541  Q
    ||||| |||| |||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 15409528 - 15409579
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccat 15409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 31009082 - 31008988
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||| |||| |||||||||  | |  ||||||||||||||||||||| |||||||||| ||||    
T  31009082 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 33149560 - 33149610
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||| ||||||||| |||||||||||||    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgca 33149610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 3921181 - 3921234
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||||| |||| |  ||||||||||| ||||||||||    
T  3921181 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 3921234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 2252085 - 2252137
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||||||||||    
T  2252085 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 2252137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 483 - 546
Target Start/End: Original strand, 39688934 - 39688997
Alignment:
Q  483 tcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||| |||| ||||||||||||||| ||||||| ||| ||||| ||| |||||||||| ||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 2740452 - 2740402
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||| ||||||||    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgca 2740402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 8076437 - 8076376
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||||||| |||| ||||| ||||||| ||||| | |||||||||| |||||||||||||    
T  8076437 ggataatgttt-catgaacacccttttctctatacatacattgtaccacttccatgtgagagt 8076376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 14831992 - 14831942
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgca 14831942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 18520806 - 18520856
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| |||||| |||||||||||| |||||| ||||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgca 18520856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 35785377 - 35785327
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||  ||||||||||| |||||||||||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgca 35785327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 13811825 - 13811780
Alignment:
Q  373 tacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||||||||||||||||||| |||||| |||| |||| ||||||||    
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgca 13811780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 5e-25; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 11511468 - 11511563
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| | ||||||| |||  |||||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  11511468 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 50052434 - 50052528
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  50052434 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 480453 - 480547
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||  | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  480453 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 467 - 547
Target Start/End: Original strand, 50526192 - 50526272
Alignment:
Q  467 tccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||| ||| ||||||||||| |||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  50526192 tccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 54473539 - 54473634
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| | ||||||| |||  |||||| ||| |||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  54473539 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 48183055 - 48183149
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||| ||||| |||||||||||||||||||    
T  48183055 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 3481748 - 3481652
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||||| ||||||| |||  | |||||||| |||| |||||||||||| | |||||||| ||||||| | |||||||||||||||||||||    
T  3481748 tgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactcat 3481652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 6034138 - 6034043
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| | | ||||| |||  || ||||||| |||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  6034138 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 480 - 547
Target Start/End: Complemental strand, 31910258 - 31910191
Alignment:
Q  480 gtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||| |||| |||||||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  31910258 gtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 29239980 - 29239886
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| ||||||| |||  |||||| ||| |||| ||||| ||||||  ||||||||| ||||||||| |||||||||||||||||||    
T  29239980 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 29977979 - 29977885
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| |||||| ||||  |||||||||| |||| ||||||||| ||||||||||||| |||||| || | | |||||||||||||||    
T  29977979 tgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 41236441 - 41236347
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||| ||||||  ||||||||| ||||||||| |||||||||||||||||||    
T  41236441 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 29240071 - 29240010
Alignment:
Q  361 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||    
T  29240071 aaaggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactag 29240010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 479 - 548
Target Start/End: Complemental strand, 40574846 - 40574777
Alignment:
Q  479 cgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||||| |||| |||||||||||| |||||||||  |||||||||||||||||||||||| ||||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactcat 40574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 23608329 - 23608235
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||||  || ||| |||  |||||||||| |||| ||||||||||||  |||||||||||| |||||| ||||||| |||||||||||    
T  23608329 tgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 24995113 - 24995207
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||| | ||||||||||||||||| |||||||||| || |||||| |||| || |||||||||||    
T  24995113 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 41824064 - 41824010
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgca 41824010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 42044373 - 42044467
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||  | || ||||||| ||||||||| |||||||||||||||||||    
T  42044373 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 48647732 - 48647826
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |  |||||| ||| ||||||| ||| |||||||||||||| ||| |||||||||| |||||||||||| ||||| |||| ||||    
T  48647732 tgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 481 - 546
Target Start/End: Original strand, 29547994 - 29548059
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| ||||||||||||||| ||||||| ||||||||||||| |||||||||| ||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 55475256 - 55475191
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| |||||||||||| |||||||||| ||||||||||||| |||||||||| ||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 6034222 - 6034172
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgca 6034172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 19670726 - 19670816
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| |||| |||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  19670726 cttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 28480274 - 28480360
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtat 538  Q
    |||| ||||||| |||||||||||  || ||||||| |||| |||| |||| |||  |||||||||||||||||| |||||||||||    
T  28480274 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 28481149 - 28481235
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtat 538  Q
    |||| ||||||| |||||||||||  || ||||||| |||| |||| |||| |||  |||||||||||||||||| |||||||||||    
T  28481149 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 28482024 - 28482110
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtat 538  Q
    |||| ||||||| |||||||||||  || ||||||| |||| |||| |||| |||  |||||||||||||||||| |||||||||||    
T  28482024 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 29234251 - 29234345
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||  ||| |||| |||||||||| || |||||| |||||||||||||||||||    
T  29234251 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 48182971 - 48183021
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgca 48183021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 3481828 - 3481787
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacaccct 403  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  3481828 aaggaaaatgttacatagacaccctttattctcatacaccct 3481787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 481 - 546
Target Start/End: Original strand, 8343198 - 8343263
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||||||| |||||||| || ||||||| ||||||||||||| |||||||||| ||||    
T  8343198 tgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 31910376 - 31910323
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||    
T  31910376 aaggaaaatgttacatagacaccatttattcccatacactcttgtacatcccat 31910323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 40574959 - 40574910
Alignment:
Q  366 aaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccat 40574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Original strand, 19670630 - 19670686
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  19670630 aaaaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 19670686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 363 - 422
Target Start/End: Original strand, 50052345 - 50052404
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||||||||||| ||||||| |||||||| || ||||||  |||||||||    
T  50052345 aggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactag 50052404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 363 - 422
Target Start/End: Original strand, 50526088 - 50526147
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||||| ||||| ||||||   |||||||||| |||||||||||||||||    
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactag 50526147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 17983753 - 17983823
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaagg 526  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| |||||||||    
T  17983753 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 41236525 - 41236475
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 41236475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 472 - 546
Target Start/End: Original strand, 50813918 - 50813992
Alignment:
Q  472 atgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||| ||| ||||||| |||| ||||||||||||||||||||||  ||||||||  ||| |||||||||| ||||    
T  50813918 atgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 29547876 - 29547929
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  29547876 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 29547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 32767023 - 32766958
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| | ||||||||||||||||||||| ||||||||  ||| |||||||||| ||||    
T  32767023 tgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 477 - 546
Target Start/End: Complemental strand, 47104613 - 47104544
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||| | |||| |||||||||||  | ||||||||||| ||||| |||||||| |||||||||||    
T  47104613 cacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 481 - 546
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| | ||||||||||| ||||||||| ||||||||| ||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 55475373 - 55475321
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 55475321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 416
Target Start/End: Original strand, 18924410 - 18924465
Alignment:
Q  361 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||||||||||||||||||||||| |||| |  ||||||||||| |||||| ||||    
T  18924410 aaaggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatg 18924465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 24995029 - 24995079
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| |||||||| || |||||||||||||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgca 24995079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 456 - 538
Target Start/End: Original strand, 29589750 - 29589831
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtat 538  Q
    |||||||| |||||| |||  ||| | ||||| |||| ||||||||||||||||||||||| || |||||| ||| |||||||    
T  29589750 cttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 48525508 - 48525447
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||||||| |||| ||||| ||| ||| ||||||| |||||||||| |||||||||||||    
T  48525508 ggataatgttt-catgaacaccctttcctctatacacacattgtaccacttccatgtgagagt 48525447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 32939688 - 32939756
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||| ||||| |||| || | ||||||||||||| ||||| ||||| |||||||||||    
T  32939688 cacgtgtcagattttt-tgtggctgtcgagagatgtattgtcaccttaggatatctatatatcattactc 32939756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 2e-24; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 452 - 550
Target Start/End: Complemental strand, 19329936 - 19329838
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcatgt 550  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  19329936 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcatgt 19329838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 38267134 - 38267039
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  38267134 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 8080389 - 8080483
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  8080389 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 36361919 - 36362013
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| ||||||| |||  |||||||||| |||| |||||||||||| || ||||||| ||||||||| |||||||||||||||||||    
T  36361919 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 19436219 - 19436287
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  19436219 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 3434656 - 3434562
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||  |||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  3434656 tgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 7389483 - 7389389
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| | |||||||| ||||||||| |||||||||||||||||||    
T  7389483 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 36362120 - 36362026
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| ||||||| |||  |||||||||| |||| |||||||||||| || ||||||  ||||||||| |||||||||||||||||||    
T  36362120 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 46033719 - 46033770
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccat 46033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 478 - 548
Target Start/End: Complemental strand, 21234469 - 21234399
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||| | |||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  21234469 acgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactcat 21234399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 35137627 - 35137531
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||| ||||| | ||||||| |||  |||||| ||| |||| |||||||||||| |||||||||| ||||||||| ||||||| |||||||||||||    
T  35137627 tgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactcat 35137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 452 - 556
Target Start/End: Complemental strand, 38837311 - 38837207
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcatgtg 551  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||| |||||  | |||||||||| ||||||||| ||||||||||||||||||| | ||    
T  38837311 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactcttttg 38837212  T
Q  552 aaaaa 556  Q
    |||||    
T  38837211 aaaaa 38837207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 46374741 - 46374793
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  46374741 aggaaaatgttacatagacaccatttattcccatacacccttgtacaccccat 46374793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 455 - 546
Target Start/End: Complemental strand, 26296735 - 26296644
Alignment:
Q  455 gcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| | |||||| |||  ||||| ||||| |||||||||| ||| || |||| |||||||||||||||||||||||||||||| ||||    
T  26296735 gcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 35523062 - 35523007
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  35523062 aaaaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccat 35523007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 546
Target Start/End: Complemental strand, 22343451 - 22343361
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  22343451 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 481 - 547
Target Start/End: Original strand, 32564461 - 32564527
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||| |||| |||||||||| |||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 41423864 - 41423806
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||| ||||| |||||||||||||||| || |||||||||||||||||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactag 41423806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||  ||  ||||||||||| |||| ||||||||| || |||||| ||| |||||||||||||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 19436114 - 19436159
Alignment:
Q  373 tacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgca 19436159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 46033832 - 46033901
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||||||||||||| || |||||||||| |||||||| || |||||||||||| ||||    
T  46033832 cacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 3694461 - 3694365
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | | |||||||||  |||||||||| |||| ||||||||| ||  ||||||||||||||||||| ||| ||| |||||||| ||||    
T  3694461 tgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcattattcat 3694365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 21234584 - 21234532
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||| |||||||||||||||| || ||||||||||    
T  21234584 aggaaaatgttacatagacaccttttattctcatacaccattgtacaccccat 21234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 452 - 543
Target Start/End: Complemental strand, 3784089 - 3783998
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatta 543  Q
    |||||||||| | | ||||| |||  |||||||||| |||| ||||||||||||  | ||||||| ||||||||| ||||||||||||||||    
T  3784089 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 475 - 546
Target Start/End: Original strand, 10343592 - 10343663
Alignment:
Q  475 aacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||| |||||||| |||| |||||||||||||  |||||||  ||||||||| |||||||||||||||||||    
T  10343592 aacatgtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 4999436 - 4999486
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgca 4999486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 4999520 - 4999614
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||| ||||| | ||||||| |||  |||| ||||| |||| ||||||||||||  ||||||||| || |||||| |||||||||||||||||||    
T  4999520 tgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 18207273 - 18207180
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| ||| ||| ||  ||||||| ||| |||| | ||||||||||| ||||||||| ||||||||| |||||||||||||| ||||    
T  18207273 tgtgcttgtgtggggttcacgtgc-cacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 477 - 547
Target Start/End: Original strand, 39255954 - 39256024
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||||||||| |||| | ||||| ||||| ||||||||| ||||||||| |||||||||||||| |||||    
T  39255954 cacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 456 - 546
Target Start/End: Complemental strand, 41915831 - 41915741
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||| ||||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  41915831 cttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 452 - 517
Target Start/End: Original strand, 16374830 - 16374895
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgt 517  Q
    |||||||||||||| ||||| ||| ||||||||||| |||| ||||| ||||||||| ||||||||    
T  16374830 tgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattgt 16374895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 35468898 - 35468955
Alignment:
Q  489 ttttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||||||||  | ||||||| || ||||||||||||||||||||||||||    
T  35468898 ttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 35522970 - 35522881
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcat 541  Q
    |||||||||| | | |||| |||  ||||||||||| |||| ||||||||| ||  ||||||||| ||| ||||||||||||||||||||    
T  35522970 tgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 481 - 546
Target Start/End: Complemental strand, 38044262 - 38044197
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| ||||| ||||||||||||||||| ||||||||| ||| |||||||||| ||||    
T  38044262 tgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 40846156 - 40846213
Alignment:
Q  489 ttttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  40846156 ttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 40957775 - 40957707
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||||| |||| | |||||||| ||||||||  |||||||||||||||||||    
T  40957775 acgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 8080305 - 8080355
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 8080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 13768552 - 13768490
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    |||||||||||||||| ||||| |||| || |||||||||||||| ||| ||||| |||||||    
T  13768552 ggataatgttttcatgaacacccttttttctatacacatattgtatcacttccatatgagagt 13768490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 365 - 415
Target Start/End: Original strand, 16374743 - 16374793
Alignment:
Q  365 gaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccat 16374793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 19330020 - 19329970
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 19329970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 28713859 - 28713798
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||||||| |||| ||||| ||||||| |||||||||||||||||| | |||||||||||    
T  28713859 ggataatgttt-catgaacacccttttctctatacacatattgtaccactttcatgtgagagt 28713798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 494 - 548
Target Start/End: Complemental strand, 31735936 - 31735882
Alignment:
Q  494 tgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||||| || | |||||||| |||||||||||||||||||||||| ||||||    
T  31735936 tgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactcat 31735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 456 - 548
Target Start/End: Complemental strand, 8238303 - 8238210
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcaccta-aggatgtctatgtatcattactcat 548  Q
    |||||| | |||||| ||||  || ||||||| |||| |||||||||||| |||||||||| |||||| ||| ||| |||||||||| ||||||    
T  8238303 cttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcat 8238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 497 - 546
Target Start/End: Complemental strand, 11044237 - 11044188
Alignment:
Q  497 gggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||| || ||||||| ||||||||| |||||||||||||||||||    
T  11044237 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 452 - 545
Target Start/End: Original strand, 32951499 - 32951592
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    |||||||||| | ||||||| |||  |||||| ||| |||| ||||| ||| || || |||||||||| |||||  ||||||||||||||||||    
T  32951499 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 8238399 - 8238343
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||||||||||||||||||||| || |||| |  ||||||||||| |||||||||||    
T  8238399 aaaaggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatg 8238343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 362 - 422
Target Start/End: Original strand, 27744225 - 27744285
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||| ||| ||||||||||||| |||| | |||| |||| ||||||||||||    
T  27744225 aaggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactag 27744285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 31736060 - 31736008
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||| ||||| ||| ||||||| ||||||||||| ||||||||||    
T  31736060 aggaaaatgttagatagataccttttattcccatacacccttgtacaccccat 31736008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 32951415 - 32951463
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||| ||||||||||||  |||||||||||||||||| |||||||||||    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatg 32951463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 36362192 - 36362144
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||| |||||||||||| ||||||||||||||||||| |||| ||||||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatg 36362144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 38044379 - 38044327
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 38044327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 366 - 409
Target Start/End: Original strand, 39255844 - 39255887
Alignment:
Q  366 aaaatgttacatagacaccatttattctcatacacccttctaca 409  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||    
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtaca 39255887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 3434730 - 3434680
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgca 3434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 35468773 - 35468831
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||| ||||| |||||||||||||| |||| |||| | |||| |||||    
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactag 35468831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 36208267 - 36208173
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||   ||||||| ||| ||| ||||||  |||| |||||||||||| |  ||||||  ||||||||| |||||||||||||| ||||    
T  36208267 tgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 38349459 - 38349520
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||||||| |||| ||||| ||| ||| ||||||| |||||||||| |||||||||||||    
T  38349459 ggataatgttt-catgaacaccctttcctctatacacacattgtaccacttccatgtgagagt 38349520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 40957885 - 40957835
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| ||||||||||||  ||||| |||||||||||| |||||||||||||    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgca 40957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 368 - 409
Target Start/End: Original strand, 36361847 - 36361888
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctaca 409  Q
    |||| |||||||||||| ||||||||||||||||||| ||||    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtaca 36361888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 301 - 354
Target Start/End: Original strand, 37536323 - 37536376
Alignment:
Q  301 tttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||| ||||| ||||||| ||||||| |||||||||| | |||||||||||    
T  37536323 tttcatgaacaccattttctctatacacacattgtaccactttcatgtgagagt 37536376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 41915921 - 41915872
Alignment:
Q  366 aaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||| |||| |  ||||||||||| ||||||||||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 41915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 2e-24; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 9058574 - 9058480
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | |||||||||||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  9058574 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 13438437 - 13438341
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  13438437 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactcat 13438341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 7465741 - 7465835
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||||| ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| || |||||| |||||||||||||||||||    
T  7465741 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 10249388 - 10249482
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  10249388 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 32505654 - 32505748
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  32505654 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 33436305 - 33436211
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||  | |||||||||  ||||||||||| |||||||||||||||||  ||||||||| || ||||||||||||||||||||||||||    
T  33436305 tgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 550
Target Start/End: Original strand, 40613908 - 40614006
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcatgt 550  Q
    |||||||||| | ||||||  ||  ||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||    
T  40613908 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcatgt 40614006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 452 - 543
Target Start/End: Complemental strand, 28863549 - 28863458
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatta 543  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  28863549 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 5574494 - 5574588
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||| ||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||    
T  5574494 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 30915557 - 30915463
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||  | ||||||| |||  |||||||||| ||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||    
T  30915557 tgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 33436106 - 33436200
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||| ||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  33436106 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 452 - 549
Target Start/End: Original strand, 19930826 - 19930923
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcatg 549  Q
    |||| ||||| | |||||||||||  |||||||||| |||| ||||| |||||| |||||||||| ||||||||| |||||||||||||||| |||||    
T  19930826 tgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcattattcatg 19930923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 456 - 548
Target Start/End: Complemental strand, 43490211 - 43490119
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  43490211 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactcat 43490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 17473114 - 17473020
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||| |||| |||||||||||| |||||||||| || |||||| |||||||||||||||||||    
T  17473114 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 20700997 - 20700939
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactag 20700939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 26891510 - 26891604
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||  ||||||||| ||| ||| ||||||| |||| |||||||||| |||||||||||| ||||||||| || ||||||||||| ||||    
T  26891510 tgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 4060753 - 4060684
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| |||| ||||| ||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  4060753 acgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 40701546 - 40701477
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| |||| ||||||||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  40701546 acgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 27864798 - 27864702
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||| || | ||||||| |||  |||||||||| |||| ||||| |||||| |||||||||| ||| ||||| |||||||||||||||||||||    
T  27864798 tgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactcat 27864702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 17820010 - 17820105
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||| ||||||| ||||||| | | ||| ||||||| |||| ||||||||||||||||||||||| ||||||  | |||||||||||||| |||||    
T  17820010 tgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 20700909 - 20700815
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| || | ||||||| |||  |||||||||| |||| ||| || ||||| |||||||||| ||| |||||||||||||||||||||||||    
T  20700909 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 478 - 548
Target Start/End: Original strand, 28381687 - 28381757
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| |||| |||||||||| |  ||||||||| ||||||||| |||||||||||||||||||||    
T  28381687 acgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcat 28381757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 456 - 546
Target Start/End: Complemental strand, 38732444 - 38732354
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||| ||| ||||||| |||| ||||||||||||||| ||||||||||| ||||| ||| |||||||||| ||||    
T  38732444 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 42257287 - 42257193
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||  ||  ||||||||||| |||||||||||||||||  | ||||||| ||||||| |||||||||||||||| ||||    
T  42257287 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 40613819 - 40613871
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  40613819 aggaaaatgttacatagacaccctttattcccatacacccttgtacaccccat 40613871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 10249304 - 10249354
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgca 10249354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 41575232 - 41575138
Alignment:
Q  452 tgtgcttgtgt-gaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattact 545  Q
    ||||||||||| | ||||||||||| ||| ||||| | |||| ||||  |||||| |||||||||  || |||||||||||||||||||||||||    
T  41575232 tgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 45097745 - 45097835
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||  ||| ||||||| |||| | ||||||||||||| ||||||| ||||||||||||| |||||||||| ||||    
T  45097745 cttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 38882833 - 38882913
Alignment:
Q  465 ggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||  |||||||||| |||| ||||| |||||| |||| ||||| ||||||||| |||||||||||||||||||    
T  38882833 ggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 17823852 - 17823784
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| |||||||||  |||  ||||||| ||||||||||||| |||||||||||||||    
T  17823852 acgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactc 17823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 33436386 - 33436346
Alignment:
Q  361 aaaggaaaatgttacatagacaccatttattctcatacacc 401  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  33436386 aaaggaaaatgttacatagacaccttttattctcatacacc 33436346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 38273174 - 38273242
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||||||| || |||||||||| || ||||| ||||||||||||||| ||||    
T  38273174 acgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 36169018 - 36168967
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||    
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccat 36168967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 41758773 - 41758718
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||| ||||||||||||||||||  |||||||||||||| |||| ||||||||||    
T  41758773 aaaagaaaaatgttacatagacacattttattctcatacatccttgtacaccccat 41758718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 456 - 526
Target Start/End: Original strand, 2997497 - 2997567
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaagg 526  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| |||||||||    
T  2997497 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 32505570 - 32505620
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||  ||||||||||||||||||| |||||||||||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgca 32505620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 38882733 - 38882783
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||||||||||    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgca 38882783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 477 - 546
Target Start/End: Complemental strand, 36168905 - 36168836
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||| | |||| |||||| || || || |||||||||| ||||||||||||||||||||| ||||    
T  36168905 cacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 2533191 - 2533124
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||| |||||| || ||||||| ||| |||||||||||||||||||| ||||    
T  2533191 acgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 2533306 - 2533254
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||| ||| ||||| ||||||| ||||||||||| ||||||||||    
T  2533306 aggaaaatgttatatatacaccctttattcccatacacccttgtacaccccat 2533254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 17823971 - 17823919
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||||||| | ||||||  ||||||||||| ||||||||||    
T  17823971 aggaaaatgttacatagacatcctttatttacatacacccttgtacaccccat 17823919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 375 - 418
Target Start/End: Original strand, 33436029 - 33436072
Alignment:
Q  375 catagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgca 33436072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 412
Target Start/End: Complemental strand, 3440163 - 3440113
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccc 412  Q
    ||||||||||||||||||||||| ||||||  |||||||| || |||||||    
T  3440163 aaggaaaatgttacatagacaccctttatttccatacacctttgtacaccc 3440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 5574422 - 5574472
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| ||||| |||||||    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgca 5574472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 7465657 - 7465707
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgca 7465707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 13438521 - 13438471
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgca 13438471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 17473198 - 17473148
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgca 17473148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 19930742 - 19930792
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgca 19930792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 28863633 - 28863583
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||| ||||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgca 28863583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 40216591 - 40216530
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||||||| |||| ||||| ||| ||| ||||||| |||||||||| |||||||||||||    
T  40216591 ggataatgttt-catgaacaccctttcctctatacacacattgtaccacttccatgtgagagt 40216530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 13365536 - 13365483
Alignment:
Q  363 aggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    |||||||||||||||||||||| |||| |  ||| ||||||| |||||||||||    
T  13365536 aggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatg 13365483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 481 - 546
Target Start/End: Original strand, 15428775 - 15428840
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||| |||| |||| ||||||||||| | ||| ||||||||| |||||||||| ||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 657
Target Start/End: Complemental strand, 40095300 - 40095267
Alignment:
Q  624 ggtacatgtcatctaaggtggtatatgtatcact 657  Q
    |||||||||||||||||||||| |||||||||||    
T  40095300 ggtacatgtcatctaaggtggtctatgtatcact 40095267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 399
Target Start/End: Complemental strand, 41575308 - 41575275
Alignment:
Q  366 aaaatgttacatagacaccatttattctcataca 399  Q
    |||||||||||||||||| |||||||||||||||    
T  41575308 aaaatgttacatagacactatttattctcataca 41575275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 3e-23; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 27564741 - 27564837
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  27564741 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcat 27564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 2582009 - 2581915
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  2582009 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 11152292 - 11152352
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcact 420  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  11152292 aaaaggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcact 11152352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 9474882 - 9474977
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||| ||||| | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  9474882 tgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 32813341 - 32813247
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||  ||| ||||||||||| |||| ||||||||| || |||||||||| |||||||||||||||||||||||| ||||    
T  32813341 tgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 51898689 - 51898783
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | | ||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  51898689 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 3302539 - 3302635
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||||| || |||||| ||||  |||||||||| |||| |||||||||| |||  | ||||||||||||||||||| |||||||||||||||||    
T  3302539 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcat 3302635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 477 - 548
Target Start/End: Complemental strand, 37649267 - 37649196
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||||||| |||| |||||||||||| | |||||||| ||||||| |||||||||||||||||||||||    
T  37649267 cacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactcat 37649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 48716288 - 48716383
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||| ||||||  ||||||||| ||||||||| ||||||||||||||||||||    
T  48716288 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 3000413 - 3000319
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||  | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  3000413 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 23597122 - 23597191
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||||||||||| |||| | |||||||| ||||||| |||||||||||||||||||||    
T  23597122 cacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 452 - 548
Target Start/End: Original strand, 47452326 - 47452422
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||| | | ||||| |||  |||||| ||| |||| |||||||||||| |||||||||  ||||||||| |||||||||||||||||||||    
T  47452326 tgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 47452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 364 - 415
Target Start/End: Complemental strand, 32813429 - 32813378
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccat 32813378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 44548382 - 44548473
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcatta 543  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||||| ||||  ||||||||| ||||||| ||||||||||||||||||    
T  44548382 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 360 - 415
Target Start/End: Original strand, 45044474 - 45044529
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  45044474 aaaaggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccat 45044529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 456 - 547
Target Start/End: Original strand, 50591010 - 50591101
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    |||||| | |||||| |||  ||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||    
T  50591010 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 43226 - 43132
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |  |||||| |||  |||||||||| |||| |||||||||||| || ||||||||| ||||||  |||||||||||||||||||    
T  43226 tgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 38595248 - 38595154
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||  | ||||||| |||  |||||||||| |||| |||||||||||| |||||||||| ||||||| | ||| |||||||||||||||    
T  38595248 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 38632327 - 38632421
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| ||||| ||| ||  ||||||||| ||||||||| |||||||||||||||||||    
T  38632327 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 481 - 547
Target Start/End: Original strand, 41608528 - 41608594
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactca 547  Q
    ||||||| |||| |||| |||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 478 - 546
Target Start/End: Original strand, 49811559 - 49811627
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||| ||||||  ||||||||||||||||||||||||||| |||||| ||||    
T  49811559 acgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 477 - 548
Target Start/End: Complemental strand, 26440803 - 26440732
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||||||| |||| ||||||||| || ||||||||||||| |||||||||||||| |||| | ||||||    
T  26440803 cacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactcat 26440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 456 - 546
Target Start/End: Original strand, 5959010 - 5959100
Alignment:
Q  456 cttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||| | |||||| |||| ||| ||||||| |||| ||||||||||||| ||||||||| ||| ||||| ||| |||||||||| ||||    
T  5959010 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 8346394 - 8346488
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||   ||||||| |||  |||||||||| |||| ||||||||||||  ||||||||| ||||||| | || ||||||||||||||||    
T  8346394 tgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 41758983 - 41758933
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgca 41758933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Complemental strand, 50630552 - 50630458
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| | ||||||| |||  |||||||||| |||| |||||||  ||| || ||||||| ||||||||| | |||||||||||||||||    
T  50630552 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 457 - 546
Target Start/End: Complemental strand, 7740822 - 7740733
Alignment:
Q  457 ttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||| |||||||||   ||||||||| | |||||||| |||||||| || ||||||||||| ||||| |||| ||||||||| ||||    
T  7740822 ttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 452 - 548
Target Start/End: Complemental strand, 6260964 - 6260868
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||| || | ||||||| ||| ||| ||| ||| ||||||||||||||  |||||||||||  ||||||||||| ||||| |||||| ||||||    
T  6260964 tgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactcat 6260868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 452 - 520
Target Start/End: Complemental strand, 13414855 - 13414787
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcac 520  Q
    |||||||||||| ||||||| |||  |||||| ||| |||| |||||||||||| ||||||||||||||    
T  13414855 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgtcac 13414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 418
Target Start/End: Complemental strand, 50630629 - 50630586
Alignment:
Q  375 catagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgca 50630586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 27564657 - 27564707
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 27564707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 37649376 - 37649326
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 37649326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 48716204 - 48716254
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 48716254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 49811447 - 49811485
Alignment:
Q  366 aaaatgttacatagacaccatttattctcatacaccctt 404  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  49811447 aaaatgttacatagacaccctttattctcatacaccctt 49811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 51898601 - 51898659
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    ||||||||||||||| ||||| ||||||   |||||||||| |||||||||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactag 51898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 361
Target Start/End: Original strand, 526909 - 526977
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagtatgtgaa 361  Q
    ||||||||||| |||| ||||| |||||||||||||||   |||||||| ||||||||||||| ||||||    
T  526909 ggataatgttt-catgaacacccttttctccatacacactatgtaccacttccatgtgagagtgtgtgaa 526977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 477 - 546
Target Start/End: Original strand, 37926469 - 37926538
Alignment:
Q  477 cacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    ||||||||||| |||||||||||||| ||  | ||||||| ||||||| ||| |||||||||||| ||||    
T  37926469 cacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

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Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 364 - 412
Target Start/End: Complemental strand, 6261052 - 6261004
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccc 412  Q
    ||||||||||||||| |||||||||||| ||||||||| || |||||||    
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccc 6261004  T

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Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 26041137 - 26041093
Alignment:
Q  309 acacctttttctccatacacatattgtaccacctccatgtgagag 353  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  26041137 acacccttttctccatacacacattgtaccacctctatgtgagag 26041093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 41758873 - 41758805
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||| |||||| |||||||||| ||  ||| | |||||||||||||||||||    
T  41758873 acgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

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Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 44454165 - 44454125
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacaccctt 404  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacaccctt 44454125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 364 - 415
Target Start/End: Original strand, 37926356 - 37926407
Alignment:
Q  364 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||| ||| ||||||||||||||||| |||||| |||| ||||||||||    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccat 37926407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 481 - 548
Target Start/End: Complemental strand, 47748507 - 47748441
Alignment:
Q  481 tgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    ||||||| |||||| |||||||||| |||||||||| ||||||||| | | |||||||||| ||||||    
T  47748507 tgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatttatgtatcataactcat 47748441  T

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Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 5958916 - 5958970
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||||  |||| |  ||||||||||| |||||||||||    
T  5958916 aaggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatg 5958970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 9474798 - 9474848
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||  ||||||||||||||||||| |||| ||||||||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgca 9474848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 13276474 - 13276543
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagtatgtgaaa 362  Q
    ||||||||||| |||| ||||| |||||||||||||||   ||||||||  |||||||||||| |||||||    
T  13276474 ggataatgttt-catgaacacccttttctccatacacactatgtaccactcccatgtgagagtgtgtgaaa 13276543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 361
Target Start/End: Original strand, 46845665 - 46845734
Alignment:
Q  291 gggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagtatgtgaa 361  Q
    |||||||||||| |||| ||||| |||||| |||||||||  ||||||||  |||||||||||| ||||||    
T  46845665 gggataatgttt-catgaacacccttttctgcatacacattatgtaccactcccatgtgagagtgtgtgaa 46845734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 354
Target Start/End: Original strand, 47571563 - 47571624
Alignment:
Q  292 ggataatgttttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||||||| |||| ||||| ||| ||| ||||||| |||||||||| |||||||||||||    
T  47571563 ggataatgttt-catgaacaccctttcctctatacacacattgtaccacttccatgtgagagt 47571624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 47748626 - 47748572
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 416  Q
    ||||||||||||||||||||||| |||| |  ||||||| ||| |||||||||||    
T  47748626 aaggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatg 47748572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 618
Target Start/End: Complemental strand, 26041060 - 26041019
Alignment:
Q  577 tgtgtatgaggaccacgtggatacatgtcacaattgtatgtg 618  Q
    ||||| || |||||||||||| ||||||||||||||||||||    
T  26041060 tgtgtgtggggaccacgtggacacatgtcacaattgtatgtg 26041019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 301 - 354
Target Start/End: Complemental strand, 29731362 - 29731309
Alignment:
Q  301 tttcatggacacctttttctccatacacatattgtaccacctccatgtgagagt 354  Q
    ||||||| ||||| ||||||| ||||||| |||||| ||| |||||||||||||    
T  29731362 tttcatgaacacccttttctctatacacacattgtatcacttccatgtgagagt 29731309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 44454073 - 44453984
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcat 541  Q
    |||||||||||| | ||||| | | ||| ||||||| |||| ||||||| ||||| | ||||||| ||| ||| | ||||||||||||||    
T  44454073 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 714 - 759
Target Start/End: Complemental strand, 49762513 - 49762468
Alignment:
Q  714 taattctattgtaaatatatttttagagaatcttgattacaaatga 759  Q
    ||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  49762513 taattctattgaaaatatatttttagagaactttgattataaatga 49762468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 8779 - 8832
Alignment:
Q  362 aaggaaaatgttacatagacaccatttattctcatacacccttctacaccccat 415  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  8779 aaggaaaatgttacatagacaccttttattcttatacacccttgtacaccccat 8832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 478 - 548
Target Start/End: Original strand, 961 - 1031
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||  |||| ||||| ||| || |||||||||| ||||||| |||||||||||||||||||||||    
T  961 acgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 848 - 905
Alignment:
Q  365 gaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||| ||||| ||||||| ||||||| ||| |||||||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactag 905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 478 - 548
Target Start/End: Original strand, 961 - 1031
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactcat 548  Q
    |||||||||  |||| ||||| ||| || |||||||||| ||||||| |||||||||||||||||||||||    
T  961 acgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 848 - 905
Alignment:
Q  365 gaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactag 422  Q
    |||||||||||||| ||||| ||||||| ||||||| ||| |||||||||||||||||    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactag 905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 452 - 546
Target Start/End: Original strand, 10115 - 10209
Alignment:
Q  452 tgtgcttgtgtgaggtccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||  | ||||||| |||  |||||||||| |||||||||| |||||| || ||||||| ||||||| | |||||||||||||| ||||    
T  10115 tgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 4207 - 4157
Alignment:
Q  368 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 418  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgca 4157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 478 - 546
Target Start/End: Complemental strand, 4097 - 4029
Alignment:
Q  478 acgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaaggatgtctatgtatcattactc 546  Q
    |||||||||| |||| ||||||||| ||  ||||||||| || |||| | |||||||||||||||||||    
T  4097 acgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 17289 - 17238
Alignment:
Q  360 aaaaggaaaatgttacatagacaccatttattctcatacacccttctacacc 411  Q
    ||||||||||||||||||||||||| ||||||  |||||||| || ||||||    
T  17289 aaaaggaaaatgttacatagacaccctttatttccatacacctttgtacacc 17238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 467 - 526
Target Start/End: Complemental strand, 152577 - 152518
Alignment:
Q  467 tccacatgaacacgtgtcagaattttatgtgggtgtcaaggggtgtattgtcacctaagg 526  Q
    |||| |||| ||| ||||||| |||| ||||||||||||||||||||||| |||| ||||    
T  152577 tccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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