View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8378_high_4 (Length: 208)
Name: NF8378_high_4
Description: NF8378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8378_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 19583517 - 19583663
Alignment:
| Q |
11 |
tagcagagaaaccactagctgcagacttataactgtacaacaaagcatcctttgcagcctcttcactgcaataatgaatacatcaatcaacttgactttg |
110 |
Q |
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| T |
19583517 |
tagcagagaaaccactagctgcagacttataactgtacaacaaagcatcctttgcagcctcttcactgcaataatgaatacatcaatcaacttgactttg |
19583616 |
T |
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| Q |
111 |
taaaccaattctgactttttataattttttatatacatattaaattat |
158 |
Q |
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| T |
19583617 |
taaaccaattctgactttttataa-tttttatatacatattaaattat |
19583663 |
T |
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