View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8379_high_17 (Length: 369)
Name: NF8379_high_17
Description: NF8379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8379_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 361
Target Start/End: Original strand, 22918824 - 22919184
Alignment:
| Q |
1 |
cttatccaatcaaagtgttctttgtctcctacctcaggcttggcattttttaaatttgaactatatccgaaatttgttgtagtggtagggtatgtaaaaa |
100 |
Q |
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| T |
22918824 |
cttatccaatcaaagtgttctttgtctcctacctcaggcttggcatttttgaaattcgaactatatcccaaatttgttgtagtggtagggtatgtaaaaa |
22918923 |
T |
|
| Q |
101 |
taatttttaatcagaaattattatttttcaaatgattaaaaactatagtttgaagtccagacgtcttagctggtaaaagtatcaaaattgctaacccgaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| ||||||| | |
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| T |
22918924 |
taatttttaatcagaaattattatttttcaaatgattaaaaactatagtttgaagttcagaagtcttagctggtaaaaatatcaaaattgttaacccgga |
22919023 |
T |
|
| Q |
201 |
cttcgtgaccgaaattcgaccttcaacatctctacttcactatcatataaacgtcaaatatatttggtgcatccttacttgatcgtttctcaaaatattt |
300 |
Q |
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||| ||||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
22919024 |
ctttgtgaccgaaattcgaccttgaatatctctacttcactatcatataaatctcaattatatttggtgcatccttacttgatcgtttctcaaaatattt |
22919123 |
T |
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| Q |
301 |
gcaagtacactactactaaatgagacgatggatctatgttcaagtacgccaacttcttctc |
361 |
Q |
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||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| |
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| T |
22919124 |
gcaagtacactactactcaattagacgatggatctatgttcaagtacgccaacttcatctc |
22919184 |
T |
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