View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8379_high_33 (Length: 239)
Name: NF8379_high_33
Description: NF8379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8379_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 37178872 - 37179094
Alignment:
| Q |
1 |
attaaagattaaaccatttataatgcgaagatgagcacacattattataatttgaagtacttttgagctcaaaacggtaaacgttcctcaaaagggttat |
100 |
Q |
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| T |
37178872 |
attaaagattaaaccatttataatgcgaagatgagcacacattattataatttgaagtacttttgagctcaaaacggtaaacgttcctcaaaagggttat |
37178971 |
T |
|
| Q |
101 |
gtggtagttgaattgaagctgttagatgtgttaattaaggttcaaattttgatttaagactagtcaataatcaataattcttaaaggaaaaatcaagtgg |
200 |
Q |
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| T |
37178972 |
gtggtagttgaattgaagctgttaggtgtgttaattaaggttcaaattttgatttaagactagtcaataatcaataattcttaaaggaaaaatcaagtgg |
37179071 |
T |
|
| Q |
201 |
tggaaaattgcttagagggaaag |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
37179072 |
tggaaaattgcttagagggaaag |
37179094 |
T |
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