View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8379_low_12 (Length: 472)
Name: NF8379_low_12
Description: NF8379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8379_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 460; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 1 - 472
Target Start/End: Complemental strand, 45760043 - 45759572
Alignment:
| Q |
1 |
tattttatttggtattgtcccaattattggaagtggaaatcatgctagtggaagagatacaccaagtaatgctgacccaataaaatgtttcgtacaaaga |
100 |
Q |
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| T |
45760043 |
tattttatttggtattgtcccaattattggaagtggaaatcatgctagtggaagagatacaccaagtaatgctgacccaataaaatgtttcgtacaaaga |
45759944 |
T |
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| Q |
101 |
cacaaattggtgaagggctaatagaaacccaacacttgtcaatttttcatgatgaaatagaaaataagaagtgtgctatatgtgctcaatgagaacatat |
200 |
Q |
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| T |
45759943 |
caaaaattggtgaagggctaatagaaacccaacaattgtcaatttttcatgatcaaatagaaaataagaagtgtgctatatgtgctcaatgagaacatat |
45759844 |
T |
|
| Q |
201 |
agcattaatagccaatatcaaaccaaccctataacttactgaaatctgaggaccacaaaaaatgtgcctgtaccaaaagttgtaacagtacacaaatgtt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45759843 |
agcattaatagccaatatcaaaccaaccctataacttactgaaatctgaggaccacaaaaaatgtgcctgtaccaaaagttgtaacagtacacaaatgtt |
45759744 |
T |
|
| Q |
301 |
ccatgtcagctttatagacaatggatattaatcatagaaatagtttgaatcagattctcatagtctcaaagtggcctagcttgcatgttgagccttgaga |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45759743 |
ccatgtcagctttatagacaatggatattaatcatagaaatagtttgaatcagattctcatagtctcaaagtggcctagcttgcatgttgagccttgaga |
45759644 |
T |
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| Q |
401 |
ctccaactataaattgagacaactacttcaagttccttacaagtcactaacattattctaaccaataagcca |
472 |
Q |
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| T |
45759643 |
ctccaactataaattgagacaactacttcaagttccttacaagtcactaacattattctaaccaataagcca |
45759572 |
T |
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