View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8379_low_35 (Length: 242)

Name: NF8379_low_35
Description: NF8379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8379_low_35
NF8379_low_35
[»] chr7 (22 HSPs)
chr7 (117-242)||(49042708-49042833)
chr7 (5-89)||(8080373-8080454)
chr7 (5-88)||(38267070-38267150)
chr7 (6-88)||(19436178-19436257)
chr7 (5-89)||(7389418-7389499)
chr7 (5-89)||(19329871-19329952)
chr7 (5-89)||(38837246-38837327)
chr7 (2-89)||(3434591-3434675)
chr7 (5-89)||(3784024-3784105)
chr7 (5-89)||(35137562-35137643)
chr7 (2-89)||(35522905-35522989)
chr7 (6-89)||(36361904-36361984)
chr7 (6-87)||(36362057-36362135)
chr7 (5-89)||(4999504-4999585)
chr7 (5-88)||(3694397-3694477)
chr7 (11-89)||(8238242-8238317)
chr7 (5-89)||(40957736-40957817)
chr7 (5-68)||(32951483-32951543)
chr7 (11-89)||(41915770-41915845)
chr7 (5-43)||(31735949-31735987)
chr7 (5-89)||(46033791-46033872)
chr7 (11-89)||(38044226-38044301)
[»] chr8 (18 HSPs)
chr8 (5-89)||(14547951-14548032)
chr8 (5-89)||(23122587-23122668)
chr8 (5-89)||(15197362-15197443)
chr8 (5-88)||(12831077-12831157)
chr8 (5-89)||(504111-504192)
chr8 (5-89)||(40423933-40424014)
chr8 (10-89)||(15048177-15048252)
chr8 (5-87)||(10621077-10621156)
chr8 (5-87)||(34012286-34012365)
chr8 (5-89)||(5957859-5957940)
chr8 (5-85)||(8841422-8841499)
chr8 (5-89)||(37038508-37038589)
chr8 (5-89)||(43414571-43414652)
chr8 (5-87)||(1179930-1180009)
chr8 (11-88)||(10284627-10284701)
chr8 (5-87)||(44507077-44507156)
chr8 (5-74)||(9122229-9122295)
chr8 (5-89)||(4854853-4854934)
[»] chr1 (21 HSPs)
chr1 (2-89)||(44548363-44548447)
chr1 (5-89)||(8346378-8346459)
chr1 (5-89)||(2581944-2582025)
chr1 (5-89)||(3000348-3000429)
chr1 (5-89)||(9474866-9474947)
chr1 (5-89)||(27564725-27564806)
chr1 (5-89)||(32813276-32813357)
chr1 (5-89)||(38595183-38595264)
chr1 (5-89)||(41758834-41758915)
chr1 (2-88)||(26440764-26440847)
chr1 (8-89)||(48716275-48716353)
chr1 (5-88)||(43162-43242)
chr1 (5-87)||(47452310-47452389)
chr1 (5-89)||(38632311-38632392)
chr1 (5-89)||(50630487-50630568)
chr1 (5-89)||(51898673-51898754)
chr1 (6-89)||(45044551-45044631)
chr1 (5-88)||(49811517-49811597)
chr1 (8-88)||(13414791-13414868)
chr1 (11-89)||(5958996-5959071)
chr1 (2-89)||(26274461-26274545)
[»] chr6 (13 HSPs)
chr6 (5-89)||(32869707-32869788)
chr6 (5-89)||(22880648-22880729)
chr6 (5-89)||(11427647-11427728)
chr6 (5-89)||(17598583-17598664)
chr6 (6-89)||(29857856-29857936)
chr6 (5-89)||(6209455-6209536)
chr6 (5-89)||(31109390-31109471)
chr6 (5-89)||(31976277-31976358)
chr6 (5-87)||(23128117-23128196)
chr6 (6-89)||(31110752-31110830)
chr6 (47-87)||(946407-946447)
chr6 (11-89)||(4231577-4231652)
chr6 (5-45)||(30870084-30870124)
[»] chr4 (20 HSPs)
chr4 (5-89)||(48183039-48183120)
chr4 (5-89)||(29234235-29234316)
chr4 (5-89)||(41236376-41236457)
chr4 (2-74)||(41823926-41823995)
chr4 (5-89)||(50052418-50052499)
chr4 (5-88)||(480437-480517)
chr4 (6-89)||(11511453-11511533)
chr4 (5-88)||(54473523-54473603)
chr4 (5-89)||(6034073-6034154)
chr4 (5-88)||(31910222-31910302)
chr4 (5-74)||(42044357-42044423)
chr4 (5-89)||(24995097-24995178)
chr4 (5-89)||(29239915-29239996)
chr4 (5-88)||(23608265-23608345)
chr4 (11-89)||(3481683-3481758)
chr4 (11-89)||(29977914-29977989)
chr4 (5-74)||(53352556-53352622)
chr4 (5-87)||(40574810-40574889)
chr4 (11-89)||(55475220-55475295)
chr4 (50-89)||(50526203-50526242)
[»] chr3 (22 HSPs)
chr3 (5-89)||(33644229-33644310)
chr3 (5-89)||(53982040-53982121)
chr3 (5-89)||(31456718-31456799)
chr3 (5-89)||(52629329-52629410)
chr3 (2-89)||(48587078-48587162)
chr3 (5-89)||(17470434-17470515)
chr3 (5-89)||(26141522-26141603)
chr3 (5-89)||(49607443-49607524)
chr3 (5-89)||(54868885-54868966)
chr3 (6-89)||(11095346-11095424)
chr3 (6-87)||(27714882-27714960)
chr3 (5-85)||(8076426-8076503)
chr3 (5-89)||(41189754-41189835)
chr3 (5-88)||(11347912-11347992)
chr3 (5-88)||(51419350-51419430)
chr3 (5-87)||(20764905-20764984)
chr3 (5-89)||(26754724-26754805)
chr3 (5-88)||(33118841-33118921)
chr3 (5-89)||(47531894-47531975)
chr3 (5-68)||(11907421-11907481)
chr3 (47-88)||(36707453-36707494)
chr3 (5-45)||(48375696-48375736)
[»] chr2 (22 HSPs)
chr2 (5-89)||(20700844-20700925)
chr2 (5-88)||(10249372-10249452)
chr2 (5-89)||(9058509-9058590)
chr2 (5-89)||(17473049-17473130)
chr2 (5-89)||(28381645-28381726)
chr2 (5-89)||(28863484-28863565)
chr2 (5-89)||(40613892-40613973)
chr2 (2-89)||(7465722-7465806)
chr2 (5-88)||(13438373-13438453)
chr2 (5-88)||(32505638-32505718)
chr2 (5-89)||(33436090-33436171)
chr2 (5-89)||(38273132-38273213)
chr2 (5-89)||(40701507-40701588)
chr2 (5-89)||(42257222-42257303)
chr2 (6-89)||(5574479-5574559)
chr2 (5-89)||(19930810-19930891)
chr2 (5-89)||(30915492-30915573)
chr2 (5-88)||(4060715-4060795)
chr2 (11-89)||(27864733-27864808)
chr2 (5-89)||(2533153-2533233)
chr2 (5-43)||(36168908-36168946)
chr2 (11-77)||(38732395-38732458)
[»] chr5 (17 HSPs)
chr5 (5-89)||(2740303-2740384)
chr5 (5-89)||(13811681-13811762)
chr5 (5-89)||(18520874-18520955)
chr5 (5-89)||(28177804-28177885)
chr5 (5-89)||(36732932-36733013)
chr5 (5-89)||(6679727-6679808)
chr5 (5-89)||(40145436-40145517)
chr5 (5-87)||(33149628-33149707)
chr5 (5-78)||(15409600-15409670)
chr5 (8-89)||(42414295-42414373)
chr5 (5-89)||(35785228-35785309)
chr5 (6-89)||(26720545-26720625)
chr5 (6-89)||(26990294-26990374)
chr5 (5-89)||(14831843-14831924)
chr5 (5-89)||(35943882-35943963)
chr5 (3-68)||(31132394-31132456)
chr5 (6-74)||(31009032-31009097)
[»] scaffold0237 (1 HSPs)
scaffold0237 (6-89)||(4058-4138)
[»] scaffold0321 (1 HSPs)
scaffold0321 (5-89)||(10099-10180)
[»] scaffold1268 (1 HSPs)
scaffold1268 (5-89)||(919-1000)
[»] scaffold1267 (1 HSPs)
scaffold1267 (5-89)||(919-1000)
[»] scaffold0316 (1 HSPs)
scaffold0316 (6-68)||(17104-17163)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 117 - 242
Target Start/End: Complemental strand, 49042833 - 49042708
Alignment:
Q  117 aaagattaatggatttaaacttttgatttaataatgaaagaaaggaaagggacagcttccgttgaaacaaattttgtaattttccctataaagaaatgac 216  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49042833 aaagatgaatggatttaaacttttgatttaataatgaaagaaaggagagggacagcttccgttgaagcaaattttgtaattttccctataaagaaatgac 49042734  T
Q  217 agttgagcttgctccaaacgcaagtc 242  Q
    ||||||||||||||||||||||||||    
T  49042733 agttgagcttgctccaaacgcaagtc 49042708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 8080373 - 8080454
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||| ||||||||||||| ||||||||||    
T  8080373 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttatgtaggtgtcaaagggtgtattgc 8080454  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 38267150 - 38267070
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| |||||||||    
T  38267150 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtattg 38267070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 19436178 - 19436257
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||||||||| |||| |||   |||||||||||||||||||||| ||||||||| |||||||||    
T  19436178 agagaaaagagaaagtgtgcttatgcgggatccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaaggtgtattg 19436257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 7389499 - 7389418
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| |||||||||  |||||||||    
T  7389499 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagagtgtattgc 7389418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 19329952 - 19329871
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||   ||||||||||||||||| ||||||||| ||||||||||    
T  19329952 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgattac---gtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 19329871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 38837327 - 38837246
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   ||||||||||||||||||||||||||||  || ||||||||||    
T  38837327 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtaggtgtacaagggtgtattgc 38837246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 3434675 - 3434591
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||||||| |||||| |||| |||   |||||||||||| ||||||||| ||||||||| ||||||||||    
T  3434675 gaagagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacgtgtcagttttttgtgtgggtgtcaaagggtgtattgc 3434591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 3784105 - 3784024
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||| |||| |||   |||||||||||||||||||||| ||||||||| | ||||||||    
T  3784105 gagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaagatgtattgc 3784024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 35137643 - 35137562
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || ||||||||||| |||   ||||||||| |||||||||||| ||||||||| ||||||||||    
T  35137643 gagagaaaagagaaagtgtgtttgtgcggggtccacgtg---actacgtgttagatttttgtgtgggtgtcaaagggtgtattgc 35137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 35522989 - 35522905
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||||||| |||||| ||||| ||    | ||||||||||||||||||| ||||| ||||||||||||||    
T  35522989 gaagagagaaaagagaaagtgtgcttgtgcgggatccatatg---gccacgtgtcagatttttgtgtgggtgttaaatggtgtattgc 35522905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 36361904 - 36361984
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||| || |||||||| |||   |||||||||||||||||||||| ||||||||| | ||||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaggatgtattgc 36361984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 36362135 - 36362057
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    |||||||||||||||||||||| || |||||||| |||   |||||||||||||||||||||| ||||||||| | ||||||    
T  36362135 agagaaaagagaaagtgtgcttgtgtggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaggatgtatt 36362057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 4999504 - 4999585
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||| ||||||||||||||| || ||||||||||| ||||||||   || |||||||||||||| ||||||||| ||||||||||    
T  4999504 gagataaaagagaaagtgtgtttgtgcggggtccacgtgactac---gtatcagatttttgtgtgggtgtcaaaaggtgtattgc 4999585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 3694477 - 3694397
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| |||||| ||||  |||||||   ||||||||||||||||| ||||| ||| |||||||||    
T  3694477 gagagaaaagagaaagtgtgcttgtgcgggatccacatgactac---gtgtcagatttttgtgtgggtgttaaaaggtgtattg 3694397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 8238317 - 8238242
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||| ||| |||||||||||| |||||||    |||||||||||||||| ||||||||| ||||||||||    
T  8238317 aaagagaaagtgtacttgtgcggggtccatatgactaca---tgtcagatttttgtgtgggtgtcaaagggtgtattgc 8238242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 40957817 - 40957736
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| | |||| |||| |||   |||||||||||||||||||||| ||| |||||  |||||||||    
T  40957817 gagagaaaagagaaagtgtgcttgtacgggatccacgtg---actacgtgtcagatttttgtgtgggtatcaaagagtgtattgc 40957736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 32951483 - 32951543
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgt 68  Q
    ||||||||||||||||||||||| ||||||||||| |||   ||||||||| ||||||||||||    
T  32951483 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgttagatttttgtgt 32951543  T

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Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 41915845 - 41915770
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||| ||| |||||||||||| || | ||    |||||||||||||||||||||||||  ||||||||||    
T  41915845 aaagagaaagtgtacttgtgcggggtccatatggccaca---tgtcagatttttgtgtaggtgtcaaggggtgtattgc 41915770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 31735987 - 31735949
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtg 43  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  31735987 gagagaaaagagaaagtgtgcttgtgcgggatccatgtg 31735949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 46033791 - 46033872
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||| | ||||| ||||| || |||||||| ||   ||||||||||||| ||| ||||| ||| ||||||||||    
T  46033791 gagagaaaagagaaaatatgcttgtgcggagttcatgtgaccac---gtgtcagatttttatgtgggtgttaaagggtgtattgc 46033872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 38044301 - 38044226
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||| ||| |||||||||||| || ||||    |||||||||||||||| | ||||||  ||||||||||    
T  38044301 aaagagaaagtgtacttgtgcggggtccatatggctaca---tgtcagatttttgtgtggatgtcaaggggtgtattgc 38044226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 14548032 - 14547951
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||   ||||||||||||||||| ||||||||||||||||||||    
T  14548032 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactac---gtgtcagatttttgtgtgggtgtcaaatggtgtattgc 14547951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 23122587 - 23122668
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||    
T  23122587 gagagaaaagagaaagtgtgcttatgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 23122668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 15197443 - 15197362
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||    
T  15197443 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 15197362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 12831157 - 12831077
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| |||||||||    
T  12831157 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtattg 12831077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 504111 - 504192
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||| |||||||| ||||||||||| |||||||   |||||||||||||||||| ||||||||| ||||||||||    
T  504111 gagagaaaagagaatgtgtgcttgtgcggggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 504192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 40423933 - 40424014
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||||||  ||   |||||||||||||||||||||| | ||||||| ||||||||||    
T  40423933 gagagaaaagagaaagtgtgcttgtgcggggtccacatg---actacgtgtcagatttttgtgtggatgtcaaagggtgtattgc 40424014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 15048177 - 15048252
Alignment:
Q  10 aaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||| |||||||||||||||    ||||||||||||||||||||| ||||||||| ||||||||||    
T  15048177 aaaagagaaagtgtgcttgtgcggggtccatgtg---gctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgc 15048252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 10621077 - 10621156
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| |||||| || ||||| ||||   ||||||||||||||||| ||||||||| ||||||||    
T  10621077 gagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctac---gtgtcagatttttgtgtgggtgtcaaagggtgtatt 10621156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 34012286 - 34012365
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| |||||| |||| |||   ||||||||||| |||||||||| ||||||||| ||||||||    
T  34012286 gagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacgtgtcaaatttttgtgtgggtgtcaaagggtgtatt 34012365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 5957940 - 5957859
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| |||||||||||||| || |||||| |||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  5957940 gagaggaaagagaaagtgtgattgtgcgggatccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 5957859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 8841422 - 8841499
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgta 85  Q
    ||||| ||||||||||||||||| ||||||||||| |||   ||||||||| |||||||||||| ||||||||| ||||||    
T  8841422 gagaggaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgttagatttttgtgtgggtgtcaaagggtgta 8841499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 37038589 - 37038508
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||| ||||||||||||| |||||| |||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  37038589 gagaggaaatagaaagtgtgcttgtgcgggatccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 37038508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 43414571 - 43414652
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||| ||||||||   || |||||| |||||||||||| ||||||||| ||||| ||||    
T  43414571 gagagaaaagagaaagtgtgcttgtgcgggatccatgtg---accacgtgttagatttttgtgtgggtgtcaaagggtgtgttgc 43414652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 1179930 - 1180009
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| |||||  ||||  ||   |||||||||||||||||||||| ||||||||| ||||||||    
T  1179930 gagagaaaagagaaagtgtgcttgtgcggaatccacatg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtatt 1180009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 10284627 - 10284701
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||| ||||||||||| |||   ||||||||||| |||||||||| |||||||||  ||||||||    
T  10284627 aaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcaaatttttgtgtgggtgtcaaagagtgtattg 10284701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 44507077 - 44507156
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||| ||||| | ||||||||| |||   |||||||||||||||||||||| ||||| |||  |||||||    
T  44507077 gagagaaaagagaaagtatgcttgtacggggtccacgtg---actacgtgtcagatttttgtgtgggtgttaaagagtgtatt 44507156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 9122295 - 9122229
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgt 74  Q
    ||||||||||||||||||||||| |||||| |||| |||   ||||| |||||||||||||||| |||||    
T  9122295 gagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 4854853 - 4854934
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||| |||||||||||    | || | |||||||||| ||||||||| ||| ||||||||||    
T  4854853 gagagaaaagagaaagtgtgcttgtgcagggtccatgtg---gccacatatcagatttttatgtaggtgttaaagggtgtattgc 4854934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 44548363 - 44548447
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||| ||||||||||||||||    
T  44548363 gaagagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtatcaaatggtgtattgc 44548447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 8346378 - 8346459
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||   |||||||||||||||||| ||||||||||||||||||||    
T  8346378 gagagaaaagagaaagtgtgcttgtgcagggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaatggtgtattgc 8346459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 2582025 - 2581944
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  2582025 gagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 2581944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 3000429 - 3000348
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  3000429 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 3000348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 9474866 - 9474947
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || ||||||||||| |||||||   |||||||||||||||||| ||||||||| ||||||||||    
T  9474866 gagagaaaagagaaagtgtgtttgtgcggggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 9474947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 27564725 - 27564806
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||   ||||||||||||||||| ||||||||| ||||||||||    
T  27564725 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgattac---gtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 27564806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 32813357 - 32813276
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||||||||||   || ||||||||||||||||||| ||||| ||| ||||||||||    
T  32813357 gagagaaaagagaaagtgtgcttgtgcggggtccatgtg---accacgtgtcagatttttgtgtgggtgttaaagggtgtattgc 32813276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 38595264 - 38595183
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  38595264 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 38595183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 41758915 - 41758834
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || ||||||||||||||||   ||||||||||||||||||||| | ||||||| ||||||||||    
T  41758915 gagagaaaagagaaagtgtgtttgtgcggggtccatgtga---ctacgtgtcagatttttgtgtggttgtcaaagggtgtattgc 41758834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 26440847 - 26440764
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||||||||||||| ||||||||    | ||||||||||||||||||| ||||| ||| |||||||||    
T  26440847 gaagagagaaaagagaaagtgtgcttatgcgggatccatgtg---gccacgtgtcagatttttgtgtgggtgttaaagggtgtattg 26440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 48716275 - 48716353
Alignment:
Q  8 agaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||| ||||||||||| ||||||||||| |||||||   |||||||||||||||||| | ||||||||||||||||||    
T  48716275 agaaaagataaagtgtgcttgtgcggggtccacgtgacta---cgtgtcagatttttgtgtggatgtcaaatggtgtattgc 48716353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 43242 - 43162
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| ||||| ||||| |||   |||||||||||||||||||||| ||||||||| | |||||||    
T  43242 gagagaaaagagaaagtgtgcttgtgcggagtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaggatgtattg 43162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 47452310 - 47452389
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| |||||| |||| |||   ||||||||| |||||||||||| ||||||||| ||||||||    
T  47452310 gagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacgtgttagatttttgtgtgggtgtcaaagggtgtatt 47452389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 38632311 - 38632392
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||| ||||||||||| ||||||||||| |||   |||||||||||||||||||||| | ||| ||| ||||||||||    
T  38632311 gagagaaaagaaaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtggatgttaaaaggtgtattgc 38632392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 50630568 - 50630487
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| |||  |||| | ||||||||    
T  50630568 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtaacaaaggatgtattgc 50630487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 51898673 - 51898754
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||| ||||||||||||| |||||| |||| |||||||   |||||||||||||||||| ||||||||| ||||||||||    
T  51898673 gagaggaaatagaaagtgtgcttgtgcgggatccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 51898754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 45044551 - 45044631
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||| |||| || ||||||||||||||| ||||    |||||||||||||| | ||||||||||||||||||||    
T  45044551 agagaaaagagaaaatgtgtttgtgcggggtccatgtggctaca---tgtcagatttttgtatgggtgtcaaatggtgtattgc 45044631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 49811517 - 49811597
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| ||||| ||| || ||    ||||||||||||||||||||| | |||||||||||||||||    
T  49811517 gagagaaaagagaaagtgtgcttgtgcggagtctatatg---gctacgtgtcagatttttgtgtggatgtcaaatggtgtattg 49811597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 13414868 - 13414791
Alignment:
Q  8 agaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    |||||||||||| ||||||| || |||||||| ||||||||   |||| |||||||||||| ||||||||| |||||||||    
T  13414868 agaaaagagaaaatgtgcttgtgtggggtccacgtgactac---gtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5958996 - 5959071
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||| ||| |||||||||||| |||| ||    |||||||||||||||| ||||||||  ||||||||||    
T  5958996 aaagagaaagtgtacttgtgcggggtccatatgaccaca---tgtcagatttttgtgtgggtgtcaagaggtgtattgc 5959071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 26274545 - 26274461
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||| ||||||| ||| ||| || |||| |||||||    ||||||||||||| ||| | ||||||||| ||||||||    
T  26274545 gaagagagaaaagaaaaagtgtacttgtgcaggatccacgtgactat---gtgtcagatttttctgtggatgtcaaatgatgtattgc 26274461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 32869788 - 32869707
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||    
T  32869788 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 32869707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 22880648 - 22880729
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   ||||||||||||| |||||||| ||||||||| ||||||||||    
T  22880648 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagaattttgtgtgggtgtcaaagggtgtattgc 22880729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 11427728 - 11427647
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||| |||| |||   |||||||||||||||||||||| ||||||||| | ||||||||    
T  11427728 gagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaggatgtattgc 11427647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 17598664 - 17598583
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   || ||||||||||||||||||| ||||||||| | ||||||||    
T  17598664 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---acaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgc 17598583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 29857936 - 29857856
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||||||||| |||| || |||||   ||||||||||||||||| ||||| ||| ||||||||||    
T  29857936 agagaaaagagaaagtgtgcttatgcgggatccacgtaactac---gtgtcagatttttgtgtgggtgttaaaaggtgtattgc 29857856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 6209455 - 6209536
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||  ||||||||||| |||   |||||||| |||||||||||||  ||||||||| |||||||||    
T  6209455 gagagaaaagagaaagtgtgctagtgcggggtccacgtg---actacgtgacagatttttgtgtgagtgtcaaatagtgtattgc 6209536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 31109390 - 31109471
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||| ||| ||||||||| | |||||||   |||||||||||||||||| | ||||||| ||||||||||    
T  31109390 gagagaaaagagaaagtgtacttttgcggggtctacgtgacta---cgtgtcagatttttgtgtggatgtcaaagggtgtattgc 31109471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 31976358 - 31976277
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||| ||||||   || ||||||||||||||||||| ||||| ||| ||| ||||||    
T  31976358 gagagaaaagagaaagtgtgcttgtgcggggttcatgtg---accacgtgtcagatttttgtgtgggtgttaaagggtatattgc 31976277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 23128117 - 23128196
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| || ||| |||| |||||||   |||||||||||||||||| ||||||||| | ||||||    
T  23128117 gagagaaaagagaaagtgtgcttgtgtgggatccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaaggatgtatt 23128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 31110752 - 31110830
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||| ||| |||||||||||     |||||||||||||||||||   |||||||| ||||||||||    
T  31110752 agagaaaagagaaagtgtgcttgtgcagggtccatgtg---gttacgtgtcagatttttgtg--agtgtcaaagggtgtattgc 31110830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 946447 - 946407
Alignment:
Q  47 actacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    |||| |||||||||||||| |||||||||||| ||||||||    
T  946447 actaggtgtcagatttttgggtaggtgtcaaagggtgtatt 946407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 4231652 - 4231577
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||| ||| |||||||||||| ||    | ||||||||||||||||||| |||| |||  ||||||||||    
T  4231652 aaagagaaagtgtacttgtgcggggtccatatg---gccacgtgtcagatttttgtgtgggtggcaaggggtgtattgc 4231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 30870124 - 30870084
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgac 45  Q
    ||||| ||||||||| ||||||| |||||||||||||||||    
T  30870124 gagaggaaagagaaaatgtgcttgtgcggggtccatgtgac 30870084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 48183039 - 48183120
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||    
T  48183039 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 48183120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 29234235 - 29234316
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   ||||||||||||||||||||| |||| ||||| ||||||||||    
T  29234235 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgaaggtatcaaagggtgtattgc 29234316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 41236457 - 41236376
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| | ||||||| ||||||||||    
T  41236457 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtggatgtcaaaaggtgtattgc 41236376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 41823995 - 41823926
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgt 74  Q
    |||||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||| |||||    
T  41823995 gaagagagaaaagagaaagtgtgcttgtgcggggtccatgtga---ctacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 50052418 - 50052499
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||   |||||||||||||||||| ||||||||| ||||||||||    
T  50052418 gagaggaaagagaaagtgtgcttgtgcggggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 50052499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 480437 - 480517
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| | ||||||||| |||||||   |||||||||||||||||| ||||||||| |||||||||    
T  480437 gagagaaaagagaaagtgtgcttgtacggggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtattg 480517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 11511453 - 11511533
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||| ||| ||||||||| ||||||||||    
T  11511453 agagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttatgtgggtgtcaaagggtgtattgc 11511533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 54473523 - 54473603
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||   |||| |||||||||||| |||||||||||||||||||    
T  54473523 gagagaaaagataaagtgtgcttgtgcggggtccacgtgactac---gtgttagatttttgtgtgggtgtcaaatggtgtattg 54473603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 6034154 - 6034073
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||| |||| |||   ||||| |||||||||||||||| ||||||||| ||||||||||    
T  6034154 gagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacatgtcagatttttgtgtgggtgtcaaagggtgtattgc 6034073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 31910302 - 31910222
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| |||||||||||||||    ||| ||||||||||||||||| |||||||||  ||||||||    
T  31910302 gagagaaaagagaaagtgtgcttgtgcggggtccatgtg---gctatgtgtcagatttttgtgtgggtgtcaaagagtgtattg 31910222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 42044357 - 42044423
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgt 74  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| |||||    
T  42044357 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgt 42044423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 24995097 - 24995178
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||| ||||||| ||||||||||| |||   ||||||||||| |||||| ||| ||||||||| ||||||||||    
T  24995097 gagagaaaagagaaaatgtgcttgtgcggggtccacgtg---actacgtgtcaaatttttatgtgggtgtcaaagggtgtattgc 24995178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 29239996 - 29239915
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||||||||||| || |||||||| ||||||||   |||| |||||||||||| | ||||||||||||||||||    
T  29239996 gagaggaaagagaaagtgtgcttgtgtggggtccacgtgactac---gtgttagatttttgtgtggatgtcaaatggtgtattgc 29239915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 23608345 - 23608265
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    |||| |||||||||||||||||| || || || || ||||||||   ||||||||||||||||| |||||||||||||||||||    
T  23608345 gagataaaagagaaagtgtgcttgtgtggagttcacgtgactac---gtgtcagatttttgtgtgggtgtcaaatggtgtattg 23608265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 3481758 - 3481683
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||| || |||||||| |||||||    ||||||||||||||||| |||||||||  |||||||||    
T  3481758 aaagagaaagtgtgcttgtgtggggtccacgtgactat---gtgtcagatttttgtgtgggtgtcaaagagtgtattgc 3481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 29977989 - 29977914
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||| || ||||||||| |||||||   ||||||||||||||||| ||||| ||  ||||||||||    
T  29977989 aaagagaaagtgtgcttgtgtggggtccatatgactac---gtgtcagatttttgtgtgggtgttaaggggtgtattgc 29977914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 53352556 - 53352622
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgt 74  Q
    ||||||||||||||||| ||||| |||||||||||  |    ||||||||||||||||||||||||||||    
T  53352556 gagagaaaagagaaagtatgcttgtgcggggtccactt---aactacgtgtcagatttttgtgtaggtgt 53352622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 40574889 - 40574810
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| | |||| |||||||  |  |   ||||||||||||||||| ||||||||| ||||||||    
T  40574889 gagagaaaagagaaagtgtgcttgttcgggatccatgtagcagc---gtgtcagatttttgtgtgggtgtcaaagggtgtatt 40574810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 55475295 - 55475220
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||| ||||||| |||||||| || | ||    |||||||||||||||| ||||||||| ||||||||||    
T  55475295 aaagagaaagtgtacttatgcagggtccatatggccaca---tgtcagatttttgtgtgggtgtcaaagggtgtattgc 55475220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 50526203 - 50526242
Alignment:
Q  50 acgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  50526203 acgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 50526242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 33644310 - 33644229
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||    
T  33644310 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 33644229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 53982121 - 53982040
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| ||||||||||    
T  53982121 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 53982040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 31456799 - 31456718
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||||||  |||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  31456799 gagagaaaagagaaagtgtgcttgtgcggggtccacatgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 31456718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 52629410 - 52629329
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  52629410 gagagaaaagagaaagtgtgcttgtacggggtccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 52629329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 48587078 - 48587162
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||| ||| |||||| |||| |||||||   |||||||||||||| ||||||||||||| ||||||||||    
T  48587078 gaagagagaaaagagaaagtgtacttgtgcgggatccacgtgacta---cgtgtcagatttttatgtaggtgtcaaagggtgtattgc 48587162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 17470515 - 17470434
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| || |||||||| |||   |||||||||||||||||||||| ||||| ||| ||||||||||    
T  17470515 gagagaaaagagaaagtgtgcttgtgtggggtccacgtg---actacgtgtcagatttttgtgtgggtgttaaaaggtgtattgc 17470434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 26141522 - 26141603
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| || ||||||||||||   || ||||||||||||||||||| ||||| ||| ||||||||||    
T  26141522 gagagaaaagagaaagtgtgcttgtgtggggtccatgtg---accacgtgtcagatttttgtgtgggtgttaaagggtgtattgc 26141603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 49607524 - 49607443
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| || ||| |||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  49607524 gagagaaaagagaaagtgtgcttgtgtgggatccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 49607443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 54868885 - 54868966
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || ||||||||||| || ||||   |||||||||||||||||| ||||||||| ||||||||||    
T  54868885 gagagaaaagagaaagtgtgattgtgcggggtccacgtaacta---cgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 54868966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 11095346 - 11095424
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||| ||||||||||| | ||     |||||||||||||||||||||| ||||||||| ||||||||||    
T  11095346 agagaaaagagaaagtgtgtttatgcggggtacgtg-----actacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 11095424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 27714882 - 27714960
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||| |||||||||||||||| |||||||||||  ||||||   |||||||||||||||||| ||||||||| ||||||||    
T  27714882 agagagaagagaaagtgtgcttgtgcggggtccacatgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtatt 27714960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 8076503 - 8076426
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgta 85  Q
    ||||| ||||||||||||||||| ||||||||||| |||   ||||||||| |||||||||||| ||||||||| ||||||    
T  8076503 gagaggaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgttagatttttgtgtgggtgtcaaagggtgta 8076426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 41189754 - 41189835
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||||||||||    | |||||||| |||||| ||| ||||||||||| ||||||||    
T  41189754 gagagaaaagagaaagtgtgcttgtgcggggtccatgtg---gccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgc 41189835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 11347912 - 11347992
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||||||| |||||||||||    | ||||||||||||||||||| | ||||||| | |||||||    
T  11347912 gagagaaaagagaaagtgtgcttatgcagggtccatgtg---gccacgtgtcagatttttgtgtggatgtcaaaggatgtattg 11347992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 51419350 - 51419430
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| ||||||||| |||||    | ||||||||||||||||||| ||||| ||| | |||||||    
T  51419350 gagagaaaagagaaagtgtgcttgtgcggggtctatgtg---gccacgtgtcagatttttgtgtgggtgttaaaggatgtattg 51419430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 20764905 - 20764984
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| | |||||||||||||    | ||||||||||||||||||| ||||| |||  |||||||    
T  20764905 gagagaaaagagaaagtgtgcttgtacggggtccatgtg---gccacgtgtcagatttttgtgtgggtgttaaagagtgtatt 20764984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 26754805 - 26754724
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||| ||||||| |||||||||||||||   || || |||||||||||||||| | |||| || ||||||||||    
T  26754805 gagaggaaagagaaaatgtgcttgtgcggggtccatgtg---accacatgtcagatttttgtgtggatgtccaagggtgtattgc 26754724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 33118841 - 33118921
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||| |||||||||||||| || || ||| |||| |||||||   ||||||| |||||||||| ||||||||| |||||||||    
T  33118841 gagaggaaagagaaagtgtgtttctgagggatccacgtgacta---cgtgtcaaatttttgtgtgggtgtcaaagggtgtattg 33118921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 47531975 - 47531894
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||| ||| ||    | |||||||||||| |||||| | ||| ||| ||||||||||    
T  47531975 gagagaaaagagaaagtgtgcttgtgcggggttcatatg---gccacgtgtcagattcttgtgtggatgttaaaaggtgtattgc 47531894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 11907481 - 11907421
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgt 68  Q
    ||||||||||||||| ||||||| |||||||||||| ||   || || ||||||||||||||||    
T  11907481 gagagaaaagagaaaatgtgcttgtgcggggtccatatg---accacatgtcagatttttgtgt 11907421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 36707453 - 36707494
Alignment:
Q  47 actacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    |||||||||||||||||||||| | ||||||| |||||||||    
T  36707453 actacgtgtcagatttttgtgtggatgtcaaagggtgtattg 36707494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 48375696 - 48375736
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgac 45  Q
    ||||| ||||||||| ||||||| |||||||||||||||||    
T  48375696 gagaggaaagagaaaatgtgcttgtgcggggtccatgtgac 48375736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 20700925 - 20700844
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||| |||||| ||||||||||    
T  20700925 gagaggaaagagaaagtgtgcttatgcggggtccacgtg---actacgtgtcagatttttgtgtaggagtcaaagggtgtattgc 20700844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 10249372 - 10249452
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| |||||||||    
T  10249372 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaaggtgtattg 10249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 9058590 - 9058509
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||||||  |||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  9058590 gagagaaaagagaaagtgtgcttgtgcggggtccacatgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 9058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 17473130 - 17473049
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  17473130 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 17473049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 28381645 - 28381726
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||| |||||||||   |||||||||||||||||||||| |||||| || ||||||||||    
T  28381645 gagagaaaagagaaagtgtgcttgtgcggagtccatgtg---actacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgc 28381726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 28863565 - 28863484
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  28863565 gagataaaagagaaagtgtgcttgtgcggggtccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 28863484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 40613892 - 40613973
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||||||||||    | ||||||||||||||||||| ||||||||| ||||||||||    
T  40613892 gagagaaaagagaaagtgtgcttgtgcggggtccatgtg---gccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 40613973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 7465722 - 7465806
Alignment:
Q  2 gaagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||| |||||||||||||||||| || |||||||| |||||||   |||||||||||||||||| ||||||||| ||||||||||    
T  7465722 gaagagataaaagagaaagtgtgcttgtgtggggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 7465806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 13438453 - 13438373
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| ||||||||| | |||||||    
T  13438453 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtgggtgtcaaaggatgtattg 13438373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 32505638 - 32505718
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||   |||||||||||||||||| ||||||||| |||||||||    
T  32505638 gagagaaaatagaaagtgtgcttgtgcggggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaaaggtgtattg 32505718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 33436090 - 33436171
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||||||||||| ||||||||||| |||   ||||||||| |||||||||||| ||||||||| ||||||||||    
T  33436090 gagaggaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgttagatttttgtgtgggtgtcaaagggtgtattgc 33436171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 38273132 - 38273213
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||  |||||||||||||||    ||||||||||||||||||||| ||||| ||| ||||||||||    
T  38273132 gagagaaaagagaaagtgtgctagtgcggggtccatgtg---gctacgtgtcagatttttgtgtgggtgttaaagggtgtattgc 38273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 40701588 - 40701507
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || ||||||||||| || |||||   ||||||||||||||||| ||||||||| ||||||||||    
T  40701588 gagagaaaagagaaagtgtgattgtgcggggtccacgtaactac---gtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 40701507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 42257303 - 42257222
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||||||||||||    | ||||||||||||||| ||| ||||||||||| ||||||||    
T  42257303 gagagaaaagagaaagtgtgcttgtgcggggtccatgtg---gccacgtgtcagatttttatgtgggtgtcaaatgatgtattgc 42257222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 5574479 - 5574559
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||| |||||| |||| |||   |||||||||||||||||| ||| ||||||||| ||||||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacgtgtcagatttttatgtgggtgtcaaagggtgtattgc 5574559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 19930810 - 19930891
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || |||||||||||  ||||||   |||||||||||||||||| | ||||||| ||||||||||    
T  19930810 gagagaaaagagaaagtgtgtttgtgcggggtccacatgacta---cgtgtcagatttttgtgtggatgtcaaagggtgtattgc 19930891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 30915573 - 30915492
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| | ||||||||| |||   |||||||||||||||||| ||| || |||||| ||||||||||    
T  30915573 gagagaaaagagaaagtgtgcttgtacggggtccacgtg---actacgtgtcagatttttatgtgggggtcaaagggtgtattgc 30915492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 4060795 - 4060715
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattg 88  Q
    ||||||||| |||||||||||||||||||| |||| || |||||   ||||||||||||||||| | ||||||| |||||||||    
T  4060795 gagagaaaaaagaaagtgtgcttatgcgggatccacgtaactac---gtgtcagatttttgtgtggatgtcaaaaggtgtattg 4060715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 27864808 - 27864733
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||| ||||||||||| |||| |||   ||||||||||||||||| | ||||||| ||||||||||    
T  27864808 aaagagaaagtgtgcttttgcggggtccacgtgattac---gtgtcagatttttgtgtggatgtcaaagggtgtattgc 27864733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 2533233 - 2533153
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||| |||||| ||||||||||| ||||||||| |||||    ||||||||||||||||||||| ||||||||| | ||||||||    
T  2533233 gagataaaagaaaaagtgtgcttgtgcggggtctatgtg---gctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgc 2533153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 36168946 - 36168908
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtg 43  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  36168946 gagagaaaagagaaagtatgcttgtgcggggtccatgtg 36168908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 38732458 - 38732395
Alignment:
Q  11 aaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaa 77  Q
    ||||||||||||| ||| |||||||||||| ||   || || |||||||||||||||| ||||||||    
T  38732458 aaagagaaagtgtacttgtgcggggtccatatg---accacatgtcagatttttgtgtgggtgtcaa 38732395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 2740384 - 2740303
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||   ||||||||||||||||| ||||||||| ||||||||||    
T  2740384 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactac---gtgtcagatttttgtgtgggtgtcaaagggtgtattgc 2740303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 13811762 - 13811681
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||   ||||||||||||||||| ||||||||||| ||||||||    
T  13811762 gagagagaagagaaagtgtgcttgtgcggggtccacgtgactac---gtgtcagatttttgtgtgggtgtcaaatgatgtattgc 13811681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 18520874 - 18520955
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||| |||||||||||||||||| ||||||||||| |||||||   |||||||||||||||||| ||||||||| ||||||||||    
T  18520874 gagataaaagagaaagtgtgcttgtgcggggtccacgtgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 18520955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 28177885 - 28177804
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || |||||||||||||||   || ||||||||||||||||||| ||||||||| ||||||||||    
T  28177885 gagagaaaagagaaagtgtgtttgtgcggggtccatgtg---accacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 28177804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 36732932 - 36733013
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||| ||||||||||||||||| ||||||||| ||||||||||    
T  36732932 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actatgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 36733013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 6679808 - 6679727
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||| |||| || ||||||||||||||||| ||   ||||||||||||||||| ||||||||| ||||||||||    
T  6679808 gagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccac---gtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 6679727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 40145517 - 40145436
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| ||||||||||| |||   |||||||||||||||||||||| | ||| ||| ||||||||||    
T  40145517 gagagaaaagagaaagtgtgcttgtgcggggtccacgtg---actacgtgtcagatttttgtgtggatgttaaagggtgtattgc 40145436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 33149628 - 33149707
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtatt 87  Q
    ||||||||||||||||||||||| |||||| |||| |||   ||||||||||| |||||||||| ||||||||| ||||||||    
T  33149628 gagagaaaagagaaagtgtgcttgtgcgggatccacgtg---actacgtgtcaaatttttgtgtgggtgtcaaagggtgtatt 33149707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 15409600 - 15409670
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaa 78  Q
    ||||||||||||| ||||||||| |||||||||||||||    ||||||||||||||||||||| |||||||||    
T  15409600 gagagaaaagagagagtgtgcttgtgcggggtccatgtg---gctacgtgtcagatttttgtgtgggtgtcaaa 15409670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 42414295 - 42414373
Alignment:
Q  8 agaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||| ||||||||||| |||||||||||  ||||||   |||||||||||||||||| ||||||||| ||||||||||    
T  42414295 agaaaagataaagtgtgcttgtgcggggtccacatgacta---cgtgtcagatttttgtgtgggtgtcaaagggtgtattgc 42414373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 35785309 - 35785228
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||| || |||||| |||| || |||||   ||||||||||||||||| ||||||||| ||||||||||    
T  35785309 gagagaaaagagaaagtgtgattgtgcgggatccacgtaactac---gtgtcagatttttgtgtgggtgtcaaaaggtgtattgc 35785228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 26720625 - 26720545
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||| |||||| ||||||||    | ||||||||||||||| ||||||||| ||| ||||||||||    
T  26720625 agagaaaagagaaagtgtgcttgtgcgggatccatgtg---gccacgtgtcagatttttttgtaggtgttaaagggtgtattgc 26720545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 26990374 - 26990294
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||||||||||||||||||||| |||||| ||||||||    | ||||||||||||||| ||||||||| ||| ||||||||||    
T  26990374 agagaaaagagaaagtgtgcttgtgcgggatccatgtg---gccacgtgtcagatttttttgtaggtgttaaagggtgtattgc 26990294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 14831924 - 14831843
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    |||| |||| ||||||||||||| |||||| |||| ||||||||   ||||||||||||| ||| ||||||||| ||||||||||    
T  14831924 gagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactac---gtgtcagatttttatgtgggtgtcaaagggtgtattgc 14831843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 35943882 - 35943963
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||||||||||| || ||| |||| || ||||   |||||||||||||||||| ||||||||||| ||||||||    
T  35943882 gagaggaaagagaaagtgtgcttgtgtgggatccacgtaacta---cgtgtcagatttttgtgtgggtgtcaaatgatgtattgc 35943963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31132456 - 31132394
Alignment:
Q  3 aagagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgt 68  Q
    ||||||||||||| ||||| ||||| ||||||||||| |||||||||   ||||||||||||||||    
T  31132456 aagagagaaaagaaaaagtatgcttgtgcggggtccacgtgactact---tgtcagatttttgtgt 31132394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 31009097 - 31009032
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgt 74  Q
    |||| ||| ||||||||||||| |||||| |||| ||||||||   ||||||||||||||||| |||||    
T  31009097 agaggaaatagaaagtgtgcttgtgcgggatccacgtgactac---gtgtcagatttttgtgtgggtgt 31009032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 4138 - 4058
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||||||||| |||| || |||||   ||||||||||||||||| ||||| ||| ||||||||||    
T  4138 agagaaaagagaaagtgtgcttatgcgggatccacgtaactac---gtgtcagatttttgtgtgggtgttaaaaggtgtattgc 4058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 10099 - 10180
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||||||||||||||||||||| | || |||||| |||   |||||||||||||||||| ||| | ||||||| | ||||||||    
T  10099 gagagaaaagagaaagtgtgcttgtacgcggtccacgtg---actacgtgtcagatttttatgtggatgtcaaaggatgtattgc 10180  T

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Target: scaffold1268 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 919 - 1000
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||||||||||| |||||| | || |||   |||||||||||| ||||||||| | ||| ||| ||||||||||    
T  919 gagaggaaagagaaagtgtgcttgtgcgggattcacgtg---actacgtgtcagttttttgtgtggatgttaaagggtgtattgc 1000  T

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Target: scaffold1267 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 919 - 1000
Alignment:
Q  5 gagagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgtaggtgtcaaatggtgtattgc 89  Q
    ||||| ||||||||||||||||| |||||| | || |||   |||||||||||| ||||||||| | ||| ||| ||||||||||    
T  919 gagaggaaagagaaagtgtgcttgtgcgggattcacgtg---actacgtgtcagttttttgtgtggatgttaaagggtgtattgc 1000  T

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Target: scaffold0316 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 17163 - 17104
Alignment:
Q  6 agagaaaagagaaagtgtgcttatgcggggtccatgtgactactacgtgtcagatttttgtgt 68  Q
    |||| ||||||||| ||||||| |||||||||||||||   || || ||||||||||||||||    
T  17163 agaggaaagagaaaatgtgcttgtgcggggtccatgtg---accacatgtcagatttttgtgt 17104  T

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