View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8380_low_11 (Length: 240)
Name: NF8380_low_11
Description: NF8380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8380_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 45348167 - 45348383
Alignment:
| Q |
7 |
ccaatattagtcgacagtattgaatacgatacccgacataaatggtactgagtgtttaccaaacaaacgattattctaacacggtttctacaaattaaca |
106 |
Q |
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| T |
45348167 |
ccaatattagtcgacagtattgaatacgatacccgacataaatggtactgagtgtttaccaaacaaacgattattctaacacggtttctacaaattaaca |
45348266 |
T |
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| Q |
107 |
caagacaagatacacaatgattagattacaagttacaacaatcgttaaaatggaatactgaaagcacaaagaaccccagaacatccacatcatcacacaa |
206 |
Q |
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| T |
45348267 |
caagacaagatacacaatgattagattacaagttacaacaatcgttaaaatggaatactgaaagcacaaagaaccccagaacatccacatcatcacacaa |
45348366 |
T |
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| Q |
207 |
acacgaatagtcaaagt |
223 |
Q |
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||||||||||| ||||| |
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| T |
45348367 |
acacgaatagtaaaagt |
45348383 |
T |
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