View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8381_high_11 (Length: 237)
Name: NF8381_high_11
Description: NF8381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8381_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 38096382 - 38096157
Alignment:
| Q |
1 |
acccttctttcttctctttgtttcagtttctcagcaagggtagtagtggaatttgttgtaggannnnnnnnnnnnnnnnnnnnnntagttataactatct |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
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| T |
38096382 |
acccttctttcttctctttgtttcagtttctcagcaagggtagtagtggaatttgttgtagaaggtggtggtggttgtggtgggttagttataactatct |
38096283 |
T |
|
| Q |
101 |
catcaagttcttctgttgaaacacctcttgagcaacgagaatgaggtgttgttgttgaacttgtgtaacttgttttctctccatctcctaataattcctc |
200 |
Q |
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| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38096282 |
cgtcgagttcttctgttgaaacacctcttgagcaacgagaatgaggtgttgttgttgaacttgtgtaacttgttttctctccatctcctaataattcctc |
38096183 |
T |
|
| Q |
201 |
ttcatattcttcatattgatcttcat |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
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| T |
38096182 |
ttcatattcttcatattgatcttcat |
38096157 |
T |
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