View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8381_low_19 (Length: 302)

Name: NF8381_low_19
Description: NF8381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8381_low_19
NF8381_low_19
[»] chr3 (36 HSPs)
chr3 (1-104)||(51381570-51381673)
chr3 (144-273)||(51381670-51381799)
chr3 (194-239)||(43580473-43580518)
chr3 (194-239)||(790094-790139)
chr3 (194-239)||(36771677-36771722)
chr3 (195-239)||(26965609-26965653)
chr3 (195-239)||(37225705-37225749)
chr3 (195-239)||(43687996-43688040)
chr3 (195-239)||(46363121-46363165)
chr3 (196-239)||(27483294-27483337)
chr3 (195-238)||(36310361-36310404)
chr3 (194-239)||(13485915-13485960)
chr3 (194-239)||(19552538-19552583)
chr3 (198-239)||(25722571-25722612)
chr3 (195-273)||(43169333-43169411)
chr3 (194-239)||(53560663-53560708)
chr3 (195-273)||(54933281-54933359)
chr3 (195-239)||(83295-83339)
chr3 (203-239)||(15514836-15514872)
chr3 (197-273)||(35099442-35099518)
chr3 (195-238)||(44648512-44648555)
chr3 (195-233)||(2988725-2988763)
chr3 (194-273)||(32303981-32304060)
chr3 (202-239)||(1341030-1341067)
chr3 (195-273)||(27027732-27027810)
chr3 (194-239)||(34059874-34059919)
chr3 (198-239)||(43600300-43600341)
chr3 (202-239)||(45095559-45095596)
chr3 (195-239)||(2568113-2568157)
chr3 (195-239)||(3000751-3000795)
chr3 (195-239)||(20512607-20512651)
chr3 (195-239)||(25061703-25061747)
chr3 (207-239)||(38165752-38165784)
chr3 (195-239)||(44854314-44854358)
chr3 (195-239)||(49470788-49470832)
chr3 (195-239)||(50420258-50420302)
[»] chr5 (28 HSPs)
chr5 (195-277)||(42329618-42329700)
chr5 (195-239)||(31889741-31889785)
chr5 (195-273)||(166725-166803)
chr5 (194-239)||(793716-793761)
chr5 (194-239)||(14980149-14980194)
chr5 (195-273)||(36660426-36660504)
chr5 (195-239)||(27810345-27810389)
chr5 (195-239)||(4371362-4371406)
chr5 (195-239)||(13066712-13066756)
chr5 (195-239)||(27658682-27658726)
chr5 (195-239)||(28316712-28316756)
chr5 (195-239)||(31557445-31557489)
chr5 (199-239)||(33822613-33822653)
chr5 (195-239)||(34171163-34171207)
chr5 (202-277)||(28640088-28640163)
chr5 (195-279)||(39059805-39059888)
chr5 (202-239)||(15400177-15400214)
chr5 (195-277)||(17674207-17674289)
chr5 (195-273)||(29653590-29653668)
chr5 (198-239)||(32690841-32690882)
chr5 (198-239)||(41845392-41845433)
chr5 (195-239)||(4742377-4742421)
chr5 (195-239)||(4751641-4751685)
chr5 (195-239)||(12992063-12992107)
chr5 (194-238)||(32963118-32963162)
chr5 (195-239)||(33585085-33585129)
chr5 (202-263)||(36783361-36783422)
chr5 (195-239)||(38982255-38982299)
[»] chr4 (28 HSPs)
chr4 (198-273)||(28116243-28116318)
chr4 (194-239)||(6232147-6232192)
chr4 (194-239)||(6510112-6510157)
chr4 (194-239)||(21045150-21045195)
chr4 (195-273)||(35928486-35928564)
chr4 (195-239)||(19282523-19282567)
chr4 (195-239)||(29840070-29840114)
chr4 (195-239)||(44855237-44855281)
chr4 (195-239)||(50072276-50072320)
chr4 (195-239)||(56556366-56556410)
chr4 (194-277)||(30022062-30022145)
chr4 (195-273)||(24259606-24259684)
chr4 (195-273)||(31941553-31941631)
chr4 (198-239)||(45903518-45903559)
chr4 (194-239)||(47321138-47321183)
chr4 (195-239)||(1868211-1868255)
chr4 (195-239)||(6462004-6462048)
chr4 (195-239)||(15501258-15501302)
chr4 (195-239)||(32141075-32141119)
chr4 (195-239)||(52732594-52732638)
chr4 (195-239)||(55548336-55548380)
chr4 (194-237)||(31817289-31817332)
chr4 (195-237)||(28653074-28653116)
chr4 (194-239)||(43421228-43421273)
chr4 (202-239)||(45520570-45520607)
chr4 (194-239)||(51930594-51930639)
chr4 (195-239)||(6231652-6231696)
chr4 (195-239)||(39671194-39671238)
[»] chr7 (25 HSPs)
chr7 (194-277)||(1103482-1103565)
chr7 (194-239)||(22597228-22597273)
chr7 (202-239)||(40805030-40805067)
chr7 (195-239)||(18733452-18733496)
chr7 (195-239)||(40298846-40298890)
chr7 (198-273)||(42044056-42044131)
chr7 (195-277)||(31416824-31416906)
chr7 (194-239)||(36836057-36836102)
chr7 (194-239)||(41906044-41906089)
chr7 (195-239)||(3681033-3681077)
chr7 (199-239)||(5723006-5723046)
chr7 (195-239)||(28044242-28044286)
chr7 (195-239)||(30514972-30515016)
chr7 (195-239)||(42121549-42121593)
chr7 (198-262)||(19288435-19288499)
chr7 (195-237)||(19906413-19906455)
chr7 (201-239)||(22627457-22627495)
chr7 (194-273)||(32345912-32345991)
chr7 (194-239)||(17869235-17869280)
chr7 (194-239)||(18886667-18886712)
chr7 (202-239)||(19920382-19920419)
chr7 (194-239)||(43813455-43813500)
chr7 (195-239)||(26963478-26963522)
chr7 (195-239)||(32275203-32275247)
chr7 (195-239)||(36447181-36447225)
[»] chr1 (27 HSPs)
chr1 (198-273)||(44582856-44582931)
chr1 (195-273)||(11650056-11650134)
chr1 (195-273)||(26252116-26252194)
chr1 (195-239)||(24041111-24041155)
chr1 (195-239)||(38132278-38132322)
chr1 (195-239)||(48259964-48260008)
chr1 (194-273)||(5317653-5317732)
chr1 (195-273)||(22664937-22665015)
chr1 (198-239)||(40061007-40061048)
chr1 (198-239)||(50158417-50158458)
chr1 (195-239)||(84604-84648)
chr1 (195-239)||(12851739-12851783)
chr1 (195-239)||(26582923-26582967)
chr1 (198-238)||(45377261-45377301)
chr1 (196-239)||(1430623-1430666)
chr1 (196-239)||(11134571-11134614)
chr1 (198-273)||(28751484-28751560)
chr1 (195-233)||(15647177-15647215)
chr1 (194-239)||(2459005-2459050)
chr1 (198-239)||(17919930-17919971)
chr1 (198-239)||(43755054-43755095)
chr1 (195-277)||(44024543-44024625)
chr1 (195-239)||(255024-255068)
chr1 (195-239)||(9552440-9552484)
chr1 (195-239)||(12002244-12002288)
chr1 (195-239)||(15698861-15698905)
chr1 (195-239)||(35149491-35149535)
[»] chr8 (25 HSPs)
chr8 (194-239)||(2803348-2803393)
chr8 (195-277)||(14541818-14541900)
chr8 (194-239)||(22601133-22601178)
chr8 (194-239)||(45187395-45187440)
chr8 (196-273)||(30788934-30789011)
chr8 (195-239)||(36915365-36915409)
chr8 (195-238)||(3203325-3203368)
chr8 (200-239)||(32326836-32326875)
chr8 (194-273)||(27109897-27109976)
chr8 (197-239)||(34461695-34461737)
chr8 (198-239)||(16208951-16208992)
chr8 (198-238)||(27416502-27416542)
chr8 (195-239)||(29931342-29931386)
chr8 (200-239)||(34168316-34168355)
chr8 (198-239)||(7129302-7129343)
chr8 (195-273)||(7612496-7612574)
chr8 (202-239)||(8382588-8382625)
chr8 (195-273)||(9022393-9022471)
chr8 (194-239)||(38329140-38329185)
chr8 (195-239)||(156239-156283)
chr8 (195-239)||(1774170-1774214)
chr8 (195-239)||(8471279-8471323)
chr8 (195-239)||(11257540-11257584)
chr8 (198-238)||(18666632-18666672)
chr8 (199-239)||(41790228-41790268)
[»] chr6 (13 HSPs)
chr6 (195-277)||(12828753-12828835)
chr6 (194-239)||(30627088-30627133)
chr6 (195-239)||(29915539-29915583)
chr6 (195-239)||(29927205-29927249)
chr6 (195-239)||(31275752-31275796)
chr6 (195-239)||(32258720-32258764)
chr6 (195-239)||(4123965-4124009)
chr6 (195-239)||(30626867-30626911)
chr6 (200-239)||(3015919-3015958)
chr6 (195-237)||(34439525-34439567)
chr6 (194-239)||(1924774-1924819)
chr6 (195-239)||(4132085-4132129)
chr6 (195-239)||(11785212-11785255)
[»] chr2 (19 HSPs)
chr2 (194-239)||(29795300-29795345)
chr2 (194-239)||(33093365-33093410)
chr2 (195-239)||(4536572-4536616)
chr2 (195-239)||(34225771-34225815)
chr2 (195-273)||(4840803-4840881)
chr2 (195-273)||(41984416-41984494)
chr2 (195-239)||(1360175-1360219)
chr2 (196-239)||(4766298-4766341)
chr2 (197-239)||(7743401-7743443)
chr2 (194-273)||(43388733-43388812)
chr2 (198-239)||(1298890-1298931)
chr2 (195-273)||(10580934-10581012)
chr2 (202-239)||(14378334-14378371)
chr2 (194-239)||(19505974-19506018)
chr2 (195-236)||(45372645-45372686)
chr2 (195-239)||(775995-776039)
chr2 (195-239)||(14698010-14698054)
chr2 (195-239)||(43344331-43344375)
chr2 (195-239)||(45148062-45148106)
[»] scaffold0047 (1 HSPs)
scaffold0047 (195-273)||(70531-70609)
[»] scaffold0194 (1 HSPs)
scaffold0194 (195-239)||(8156-8200)
[»] scaffold0003 (1 HSPs)
scaffold0003 (195-239)||(321724-321768)


Alignment Details
Target: chr3 (Bit Score: 104; Significance: 7e-52; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 51381570 - 51381673
Alignment:
Q  1 taccatcactcaccactcttcactttctgcttctgtgcctgcaggtaaattctctagaatttctattgccatttgctagtgtatataatgaattcaatct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51381570 taccatcactcaccactcttcactttctgcttctgtgcctgcaggtaaattctctagaatttctattgccatttgctagtgtatataatgaattcaatct 51381669  T
Q  101 tcta 104  Q
    ||||    
T  51381670 tcta 51381673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 51381670 - 51381799
Alignment:
Q  144 tctaaagtattacccctccatttcaaaatgattgtcacttctnnnnnnnntttgtttcaaaataaatgtcactttacatttacaatacaactttaa-nnn 242  Q
    ||||||||||||||||||||||||||||||| |||||||||         || |||||||||||||||||||||||||||||||||||||||||||        
T  51381670 tctaaagtattacccctccatttcaaaatgagtgtcacttcaaaaaaaaatt-gtttcaaaataaatgtcactttacatttacaatacaactttaatttt 51381768  T
Q  243 nnnncttctaactttacccttgataaatact 273  Q
        |||||||||||||||| ||||||||||    
T  51381769 ttttcttctaactttaccctcgataaatact 51381799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 43580473 - 43580518
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43580473 tttgtttcaaaataaatgtcactttacattttcaatacaactttaa 43580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 790094 - 790139
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  790094 tttgtttcaaaattaatgtcactttacatttccaatacaactttaa 790139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 36771722 - 36771677
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  36771722 tttgttttaaaatgaatgtcactttacatttacaatacaactttaa 36771677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 26965653 - 26965609
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  26965653 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 26965609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 37225749 - 37225705
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  37225749 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 37225705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 43688040 - 43687996
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||    
T  43688040 ttgttccaaaataaatgtcactttacatttccaatacaactttaa 43687996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 46363165 - 46363121
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  46363165 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 46363121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 27483337 - 27483294
Alignment:
Q  196 tgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaactttaa 27483294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 36310404 - 36310361
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaacttta 238  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  36310404 ttgtttcaaaataaatgtcattttacatttccaatacaacttta 36310361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 13485960 - 13485915
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  13485960 tttgtttcaaaatgaatgtcaatttacatttccaatacaactttaa 13485915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 19552538 - 19552583
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  19552538 tttgttttaaaatgaatgtcactttacattttcaatacaactttaa 19552583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 25722612 - 25722571
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  25722612 tttcaaaatgaatgtcactttacattttcaatacaactttaa 25722571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 43169333 - 43169411
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||       |||||||||||||| |  |||||||||    
T  43169333 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttctaactttaccttcaataaatact 43169411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 53560663 - 53560708
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||    
T  53560663 tttgtttcaaaataaatgtcgttttacatttacaatgcaactttaa 53560708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 54933359 - 54933281
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||       |||| |||||||||||  |||||||||    
T  54933359 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatact 54933281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 83295 - 83339
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaa 83339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 15514872 - 15514836
Alignment:
Q  203 aaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||||| ||||||||||||||    
T  15514872 aaataaatgtcactttacatttccaatacaactttaa 15514836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 273
Target Start/End: Complemental strand, 35099518 - 35099442
Alignment:
Q  197 gtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||       || | |||||||||||| |||||||||    
T  35099518 gtttcataataaatgtcattttacatttccaatacaactttaatttttttctcccaactttacccttaataaatact 35099442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 44648555 - 44648512
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaacttta 238  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||    
T  44648555 ttgttttaaaatgaatgtcactttacatttccaatacaacttta 44648512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 2988763 - 2988725
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaa 233  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  2988763 ttgtttcaaaatgaatgtcactttacatttccaatacaa 2988725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 32304060 - 32303981
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||  |||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  32304060 tttgttttgaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 32303981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 1341067 - 1341030
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  1341067 aaaatgaatgtcactttacattttcaatacaactttaa 1341030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 27027732 - 27027810
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||       |||| ||||||| |||| |||||||||    
T  27027732 ttgtttcaaaattaatgtcaatttacatttccaatacaaatttaatttttttcttcaaactttatccttaataaatact 27027810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 34059874 - 34059919
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| ||||||| ||||||||| ||||||||||||||    
T  34059874 tttgttttaaaatgaatgtcattttacattttcaatacaactttaa 34059919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 43600341 - 43600300
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||||| ||||||||||| |||||||| |||||    
T  43600341 tttcaaaataaatgttactttacattttcaatacaattttaa 43600300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 45095559 - 45095596
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  45095559 aaaatgaatgtcactttacattttcaatacaactttaa 45095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 2568157 - 2568113
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||| ||||||||||| ||||||||||||||    
T  2568157 ttgttttaaaatgaatgttactttacattttcaatacaactttaa 2568113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 3000751 - 3000795
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||| ||||||||||| ||||||||||||||    
T  3000751 ttgttttaaaatgaatgttactttacattttcaatacaactttaa 3000795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 20512651 - 20512607
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||| |||||||||| |||| |||||||||    
T  20512651 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 20512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 25061703 - 25061747
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| |||| |||||||||||| ||||||||||||||    
T  25061703 ttgttttaaaatgaatgccactttacatttccaatacaactttaa 25061747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 239
Target Start/End: Complemental strand, 38165784 - 38165752
Alignment:
Q  207 aaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||| ||||||||||||||    
T  38165784 aaatgtcactttacatttccaatacaactttaa 38165752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44854314 - 44854358
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| || |||||||||||||| |||||||| |||||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaatacaattttaa 44854358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 49470788 - 49470832
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||    
T  49470788 ttgtttcaaaatgaatgtcgttttacattttcaatacaactttaa 49470832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 50420258 - 50420302
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||||||||||| |||||||||  |||||||||||||    
T  50420258 ttgtttaaaaataaatgtcattttacatttttaatacaactttaa 50420302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 42329700 - 42329618
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||| |||||||||||||    
T  42329700 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaa 42329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 31889741 - 31889785
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  31889741 ttgtttcaaaataaatgtcactttacatttccaatacaactttaa 31889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 166803 - 166725
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  166803 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatact 166725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 793761 - 793716
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  793761 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 793716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 14980194 - 14980149
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  14980194 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 14980149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 36660426 - 36660504
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  36660426 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 36660504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 27810345 - 27810389
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 27810389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 4371362 - 4371406
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| || |||||||||||||| ||||||||||||||    
T  4371362 ttgtttcaaaatgaacgtcactttacatttccaatacaactttaa 4371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 13066712 - 13066756
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  13066712 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaa 13066756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 27658726 - 27658682
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||    
T  27658726 ttgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 28316712 - 28316756
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||| |||| |||| ||||||||||||||    
T  28316712 ttgtttcaaaataaatgtcattttatattttcaatacaactttaa 28316756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 31557489 - 31557445
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  31557489 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaa 31557445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 33822653 - 33822613
Alignment:
Q  199 ttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  33822653 ttcaaaatgaatgtcactttacattttcaatacaactttaa 33822613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 34171163 - 34171207
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  34171163 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 34171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 28640088 - 28640163
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    ||||||||||||||||||||||| |||| |||||||||       || | |||||||||||  |||||||||||||    
T  28640088 aaaataaatgtcactttacattttcaattcaactttaatttttttctcccaactttaccctcaataaatacttcaa 28640163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 279
Target Start/End: Original strand, 39059805 - 39059888
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaaat 279  Q
    |||||||||||| |||||  |||||||||| ||||||||||||||       ||||||||||||||||  ||||||||| |||||    
T  39059805 ttgtttcaaaatgaatgttgctttacattttcaatacaactttaa-ttttttcttctaactttaccctcaataaatactccaaat 39059888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 15400177 - 15400214
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaa 15400214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 17674207 - 17674289
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    |||||||||||| ||||||||||||| ||| ||||| ||||||||       | |||||||||| |||  |||||||||||||    
T  17674207 ttgtttcaaaatgaatgtcactttacgttttcaataaaactttaattttttacgtctaactttatcctcaataaatacttcaa 17674289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 29653668 - 29653590
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||| |||||| ||||||| ||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  29653668 ttgttgcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatact 29653590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 32690882 - 32690841
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  32690882 tttcaaaatgaatgtcactttacatttcaaatacaactttaa 32690841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 41845433 - 41845392
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||||||||||||||||| |||||||| |||||    
T  41845433 tttcaaaatgaatgtcactttacattttcaatacaattttaa 41845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4742421 - 4742377
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||||||||| ||||  |||||||||||||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaa 4742377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4751685 - 4751641
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||||||||| ||||  |||||||||||||    
T  4751685 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaa 4751641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 12992063 - 12992107
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||| |||||||||  |||||||||||||    
T  12992063 ttgtttcaaaatgaatgtcattttacatttctaatacaactttaa 12992107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 32963162 - 32963118
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaacttta 238  Q
    ||||||||||||| |||  |||||||||||| |||||||||||||    
T  32963162 tttgtttcaaaatgaataccactttacatttccaatacaacttta 32963118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 33585129 - 33585085
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| || |||||||||||||| ||||||||||||||    
T  33585129 ttgttttaaaatgaacgtcactttacattttcaatacaactttaa 33585085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 36783361 - 36783422
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttaccctt 263  Q
    ||||| ||||||||||||||||| |||||||||| |||       |||||||||||||||||    
T  36783361 aaaattaatgtcactttacatttccaatacaactctaatttttttcttctaactttaccctt 36783422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 38982299 - 38982255
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| |||||||||||| |||| ||||||||||||||    
T  38982299 ttgttttaaaatgaatgtcactttatatttccaatacaactttaa 38982255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 28116243 - 28116318
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||||||||||||||||||||| ||||||||||||||       |||| |||||||||||| |||||||||    
T  28116243 tttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatact 28116318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 6232192 - 6232147
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  6232192 tttgtttcaaaataaatgtcaatttacattttcaatacaactttaa 6232147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 6510112 - 6510157
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  6510112 tttgtttcaaaataaatgtcactttatattttcaatacaactttaa 6510157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 21045150 - 21045195
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  21045150 tttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 21045195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 35928486 - 35928564
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  35928486 ttgtttcaaaataaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 35928564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 19282567 - 19282523
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  19282567 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 19282523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 29840070 - 29840114
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  29840070 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29840114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44855237 - 44855281
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  44855237 ttgtttcgaaataaatgtcactttacatttccaatacaactttaa 44855281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 50072276 - 50072320
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  50072276 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 50072320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 56556410 - 56556366
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  56556410 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 56556366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 30022062 - 30022145
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    ||||||||||||| ||||| |||| |||||| ||||||||||||||       |||| |||||||||||  |||||||||||||    
T  30022062 tttgtttcaaaatgaatgttacttgacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaa 30022145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 24259606 - 24259684
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||       |||| |||||||||||  |||||||||    
T  24259606 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatact 24259684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 31941553 - 31941631
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  31941553 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 31941631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 45903559 - 45903518
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  45903559 tttcaaaatgaatgtcactttacattttcaatacaactttaa 45903518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 47321138 - 47321183
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  47321138 tttgttttaaaatgaatgtcactttacattttcaatacaactttaa 47321183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 1868255 - 1868211
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||    
T  1868255 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaa 1868211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 6462004 - 6462048
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||| |||||||||| ||||||||||||||    
T  6462004 ttgtttcaaaatgaatgtcgctttacatttccaatacaactttaa 6462048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 15501302 - 15501258
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  15501302 ttgtttgaaaatgaatgtcactttacatttccaatacaactttaa 15501258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 32141119 - 32141075
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||    
T  32141119 ttgtttcaaaatgaatgccactttacatttccaatacaactttaa 32141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 52732594 - 52732638
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  52732594 ttgttttaaaatgaatgtcactttacatttccaatacaactttaa 52732638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 55548380 - 55548336
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||    
T  55548380 ttgtttcaaaataagtgtcactttacattttcaatgcaactttaa 55548336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 31817332 - 31817289
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaacttt 237  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||    
T  31817332 tttgtttcaaaatgaatgtcactttacatttccaatgcaacttt 31817289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 28653074 - 28653116
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaacttt 237  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||    
T  28653074 ttgtttcaaaataaatatcactttacattttcaatacatcttt 28653116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 43421273 - 43421228
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| || |||||||||||||| | ||||||||||||    
T  43421273 tttgtttcaaaatgaaggtcactttacatttcccatacaactttaa 43421228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 45520607 - 45520570
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  45520607 aaaatgaatgtcactttacattttcaatacaactttaa 45520570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 51930594 - 51930639
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| |||||| |||||||||| |||||||| |||||    
T  51930594 tttgtttcaaaatgaatgtcgctttacatttccaatacaattttaa 51930639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 6231652 - 6231696
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||||||||| ||||| | |||||||||||    
T  6231652 ttgtttcaaaatgaatgtcactttatatttatagtacaactttaa 6231696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 39671238 - 39671194
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||    
T  39671238 ttgtttcaaaatgaatgtcgttttacatttccaatacaactttaa 39671194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 1103482 - 1103565
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||       |||| |||||||||||  |||||||||||||    
T  1103482 tttgtttcaaaatgaatgtcattttacatttccaatacaactttaattgttttcttccaactttaccctcaataaatacttcaa 1103565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 22597228 - 22597273
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  22597228 tttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 22597273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 40805030 - 40805067
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40805030 aaaataaatgtcactttacatttacaatacaactttaa 40805067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 18733452 - 18733496
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  18733452 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 18733496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 40298846 - 40298890
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  40298846 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 40298890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 42044131 - 42044056
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  42044131 tttcaaaattaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 42044056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 31416906 - 31416824
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    |||||| ||||| ||| ||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||||||    
T  31416906 ttgttttaaaatgaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatacttcaa 31416824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 36836057 - 36836102
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||    
T  36836057 tttgtttcaaaatgaatgtcgctttacattttcaatacaactttaa 36836102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 41906089 - 41906044
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||    
T  41906089 tttgttttaaaataaatgtcactttacatttctaatacaactttaa 41906044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 3681077 - 3681033
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  3681077 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 3681033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 5723006 - 5723046
Alignment:
Q  199 ttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  5723006 ttcaaaatgaatgtcactttacattttcaatacaactttaa 5723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 28044286 - 28044242
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  28044286 ttgttttaaaatgaatgtcactttacattttcaatacaactttaa 28044242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 30514972 - 30515016
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  30514972 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaa 30515016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 42121549 - 42121593
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||    
T  42121549 ttgtttcaaaatgaatgtcactttatatttccaatacaactttaa 42121593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 19288499 - 19288435
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttaccct 262  Q
    ||||||||| |||||||||||||||||  |||||||||||||       ||||||||||||||||    
T  19288499 tttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttctaactttaccct 19288435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 19906413 - 19906455
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaacttt 237  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  19906413 ttgtttcaaaatgaatgtcgctttacatttccaatacaacttt 19906455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 22627495 - 22627457
Alignment:
Q  201 caaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  22627495 caaaatgaatgtcactttacatttccaatacaactttaa 22627457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 32345991 - 32345912
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||||||| |||||| |||||||||| |||| |||||||||       |||| |||||||||||  |||||||||    
T  32345991 tttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatact 32345912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 17869235 - 17869280
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||| ||||||||| |||| |||||||||    
T  17869235 tttgtttcaaaatgaatgtcattttacatttccaatgcaactttaa 17869280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 18886667 - 18886712
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| ||| ||||||||||||| ||||||||||||||    
T  18886667 tttgttttaaaatgaatctcactttacattttcaatacaactttaa 18886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 19920419 - 19920382
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaa 19920382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 43813500 - 43813455
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| |||||||||||| |||| ||||||||||||||    
T  43813500 tttgttttaaaatgaatgtcactttatatttccaatacaactttaa 43813455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 26963478 - 26963522
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||  ||||||||| |||| |||||||||    
T  26963478 ttgtttcaaaataaatgtctatttacatttccaatgcaactttaa 26963522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 32275203 - 32275247
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||| ||||||||||||  |||||||||||||    
T  32275203 ttgtttcaaaatgaatgccactttacatttctaatacaactttaa 32275247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 36447225 - 36447181
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||    
T  36447225 ttgtttcaaaatgaatgtcattttacattttcaatacaattttaa 36447181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 44582931 - 44582856
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||||||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  44582931 tttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatact 44582856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 11650056 - 11650134
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 11650134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 26252116 - 26252194
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| ||||||||||| ||       |||| |||||||||||| |||||||||    
T  26252116 ttgtttcaaaatgaatgtcactttacatttccaatacaacttaaatttttttcttccaactttacccttaataaatact 26252194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 24041155 - 24041111
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  24041155 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 24041111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 38132322 - 38132278
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  38132322 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 38132278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 48260008 - 48259964
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  48260008 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 48259964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 5317732 - 5317653
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||       |||| |||||||||||  |||||||||    
T  5317732 tttgtttcaaaatgaatgtcactttacaatttcaatacaactttaatttttttcttccaactttaccctcaataaatact 5317653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 22664937 - 22665015
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| ||||||||| ||||       |||| |||||||||||  |||||||||    
T  22664937 ttgtttcaaaatgaatgtcactttacatttccaatacaacgttaattaatttcttccaactttaccctcaataaatact 22665015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 40061048 - 40061007
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  40061048 tttcaaaatgaatgtcactttacattttcaatacaactttaa 40061007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 50158458 - 50158417
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  50158458 tttcaaaatgaatgtcactttacattttcaatacaactttaa 50158417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 84648 - 84604
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||    
T  84648 ttgttttaaaatgaatgtcactttacatttccaatacaactttaa 84604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 12851739 - 12851783
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||    
T  12851739 ttgtttcaaaatgaatgtcactttacatttccaatagaactttaa 12851783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 26582923 - 26582967
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaa 26582967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 45377301 - 45377261
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaacttta 238  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  45377301 tttcaaaatgaatgtcactttacatttccaatacaacttta 45377261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 1430666 - 1430623
Alignment:
Q  196 tgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||| |||||||||||||||||  |||||||||||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaactttaa 1430623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 11134614 - 11134571
Alignment:
Q  196 tgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||    
T  11134614 tgtttcaaaatgaatgtcactttacattttcaatgcaactttaa 11134571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 28751560 - 28751484
Alignment:
Q  198 tttcaaaat-aaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||| |||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  28751560 tttcaaaatgaaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 28751484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 15647215 - 15647177
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaa 233  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  15647215 ttgtttcaaaatgaatgtcactttacattttcaatacaa 15647177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 2459005 - 2459050
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| |||||| |||||||||| |||| |||||||||    
T  2459005 tttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 2459050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 17919971 - 17919930
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||    
T  17919971 tttcaaaatgaatatcactttacatttccaatacaactttaa 17919930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 43755054 - 43755095
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| || |||||||||||||| ||||||||||||||    
T  43755054 tttcaaaatgaacgtcactttacattttcaatacaactttaa 43755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 277
Target Start/End: Original strand, 44024543 - 44024625
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    |||||||||||| |||| | |||||||||| |||| |||||||||       |||| |||||||||||  |||||||||||||    
T  44024543 ttgtttcaaaatgaatgccgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatacttcaa 44024625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 255068 - 255024
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||| |||||||||| |||| |||||||||    
T  255068 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaa 255024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 9552484 - 9552440
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||||    
T  9552484 ttgttttaaaatgaatgtcattttacatttccaatacaactttaa 9552440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 12002244 - 12002288
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||||    
T  12002244 ttgttttaaaatgaatgtcattttacatttccaatacaactttaa 12002288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 15698905 - 15698861
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| |||||||||||| |||| ||||||||||||||    
T  15698905 ttgttttaaaatgaatgtcactttatatttccaatacaactttaa 15698861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 35149535 - 35149491
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| |||||||| |||||||| |||| ||||||||||||||    
T  35149535 ttgtttcgaaataaatttcactttatatttccaatacaactttaa 35149491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 2803393 - 2803348
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||    
T  2803393 tttgtttcaaaataaatgtcactttacattttcaatacaattttaa 2803348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 14541900 - 14541818
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    |||||||||||| |||||||||||||||||  |||||||||||||       |||| ||||||| |||| |||||||||||||    
T  14541900 ttgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttatccttaataaatacttcaa 14541818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 22601133 - 22601178
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  22601133 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 22601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 45187440 - 45187395
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  45187440 tttgtttcaaaataaatgtcactttatattttcaatacaactttaa 45187395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 273
Target Start/End: Original strand, 30788934 - 30789011
Alignment:
Q  196 tgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||       |||||||||||||||||  ||||||||    
T  30788934 tgttttaaaataaatgtcactttacatattcaatacaactttaatttttttcttctaactttacccttagtaaatact 30789011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 36915365 - 36915409
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  36915365 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 36915409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 3203325 - 3203368
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaacttta 238  Q
    |||||||||||||||||||||||||||||| |||| ||||||||    
T  3203325 ttgtttcaaaataaatgtcactttacattttcaatgcaacttta 3203368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 32326875 - 32326836
Alignment:
Q  200 tcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  32326875 tcaaaataaatgtcactttacattttcaatacaactttaa 32326836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 27109976 - 27109897
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  27109976 tttgtttcaaaatgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatact 27109897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 34461737 - 34461695
Alignment:
Q  197 gtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaa 34461695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 16208951 - 16208992
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  16208951 tttcaaaatgaatgtcactttacattttcaatacaactttaa 16208992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 27416502 - 27416542
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaacttta 238  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  27416502 tttcaaaatgaatgtcactttacatttccaatacaacttta 27416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 29931386 - 29931342
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||    
T  29931386 ttgttttaaaataaatatcactttacatttccaatacaactttaa 29931342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 239
Target Start/End: Complemental strand, 34168355 - 34168316
Alignment:
Q  200 tcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaactttaa 34168316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 7129302 - 7129343
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| ||||||||||||||||| |||| |||||||||    
T  7129302 tttcaaaatgaatgtcactttacattttcaatgcaactttaa 7129343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 7612496 - 7612574
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||| ||||| ||||||||||||||||| ||||||||| ||||       |||| |||||||||||  |||||||||    
T  7612496 ttgttttaaaatgaatgtcactttacattttcaatacaacattaagttttctcttccaactttaccctaaataaatact 7612574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 8382625 - 8382588
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaa 8382588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 9022393 - 9022471
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||| ||||| ||||||||||||| ||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  9022393 ttgttttaaaatgaatgtcactttacgtttccaatacaactttaatttttttcttccaactttaccctcaataaatact 9022471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 38329185 - 38329140
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| |||||||||||| |||| ||||||||||||||    
T  38329185 tttgttttaaaatgaatgtcactttatattttcaatacaactttaa 38329140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 156239 - 156283
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||  ||||| ||||||||    
T  156239 ttgtttcaaaatgaatgtcactttacattcccaatataactttaa 156283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 1774214 - 1774170
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||||    
T  1774214 ttgttttaaaatgaatgtcaatttacattttcaatacaactttaa 1774170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 8471279 - 8471323
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||| |||||||||| |||| |||||||||    
T  8471279 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaa 8471323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 11257540 - 11257584
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaactttaa 11257584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 18666672 - 18666632
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaacttta 238  Q
    ||||||||| ||||||||||||||||| |||| ||||||||    
T  18666672 tttcaaaatgaatgtcactttacatttccaatgcaacttta 18666632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 41790268 - 41790228
Alignment:
Q  199 ttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||| |||||||||||||||||  |||||||||||||    
T  41790268 ttcaaaatgaatgtcactttacatttctaatacaactttaa 41790228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 12828835 - 12828753
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatacttcaa 277  Q
    |||||||||||| ||| ||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||||||    
T  12828835 ttgtttcaaaatgaatttcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaa 12828753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 30627088 - 30627133
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  30627088 tttgtttcaaaataaatgtcactttatattttcaatacaactttaa 30627133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 29915539 - 29915583
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  29915539 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29915583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 29927205 - 29927249
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  29927205 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29927249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 31275796 - 31275752
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  31275796 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 31275752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 32258720 - 32258764
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  32258720 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 32258764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4124009 - 4123965
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||||||||||||||  |||||||||||||    
T  4124009 ttgtttcaaaatgaatgtcactttacatttttaatacaactttaa 4123965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 30626867 - 30626911
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||    
T  30626867 ttgtttcaaaataaatattactttacattttcaatacaactttaa 30626911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 3015919 - 3015958
Alignment:
Q  200 tcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaactttaa 3015958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 34439567 - 34439525
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaacttt 237  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||    
T  34439567 ttgtttcaaaatgaatgtcattttacatttccaatacaacttt 34439525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 1924819 - 1924774
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||| ||||| ||||||| ||||||||| ||||||||||||||    
T  1924819 tttgttttaaaatgaatgtcattttacattttcaatacaactttaa 1924774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 4132129 - 4132085
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||    
T  4132129 ttgttttaaaatgaatgtcactttacatttttaatacaactttaa 4132085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 11785255 - 11785212
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||    
T  11785255 ttgtttcaaaatga-tgtcactttacatttccaatacaactttaa 11785212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 29795345 - 29795300
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  29795345 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 29795300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 33093365 - 33093410
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  33093365 tttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 33093410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 4536572 - 4536616
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  4536572 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 4536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 34225771 - 34225815
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  34225771 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaa 34225815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 4840881 - 4840803
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  4840881 ttgttccaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatact 4840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Original strand, 41984416 - 41984494
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||||||| || |||||||||| ||||||||||||||       |||| ||||||||| || |||||||||    
T  41984416 ttgtttcaaaataaatatcgctttacattttcaatacaactttaatttttttcttccaactttacctttaataaatact 41984494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 1360175 - 1360219
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  1360175 ttgtttcaaaatgaatgtcactttgcatttccaatacaactttaa 1360219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 4766341 - 4766298
Alignment:
Q  196 tgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||    
T  4766341 tgtttcaaaatgaatgtcaatttacattttcaatacaactttaa 4766298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 7743401 - 7743443
Alignment:
Q  197 gtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaa 7743443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 43388812 - 43388733
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    ||||||||||||| |||||| |||||||||| |||| |||||||||       |||| |||||||||||  |||||||||    
T  43388812 tttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatact 43388733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 1298931 - 1298890
Alignment:
Q  198 tttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  1298931 tttcaaaatgaatgtcactttacatttctaatacaactttaa 1298890  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 10581012 - 10580934
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||| |||||||| |||| ||||||||||||||       |||| |||||||||||  |||||||||    
T  10581012 ttgtttcaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctcaataaatact 10580934  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 14378371 - 14378334
Alignment:
Q  202 aaaataaatgtcactttacatttacaatacaactttaa 239  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  14378371 aaaatgaatgtcactttacattttcaatacaactttaa 14378334  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 19505974 - 19506018
Alignment:
Q  194 tttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||    
T  19505974 tttgtttcaaaataaatgtcacttta-attcccaatacaactttaa 19506018  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 45372686 - 45372645
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactt 236  Q
    |||||| ||||| ||||||||||||||||| |||||||||||    
T  45372686 ttgttttaaaatgaatgtcactttacattttcaatacaactt 45372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 776039 - 775995
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||| |||||||||| |||| |||||||||    
T  776039 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 775995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 14698010 - 14698054
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||| |||||||||| |||| |||||||||    
T  14698010 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaa 14698054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 43344375 - 43344331
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| |||||||| ||| |||| ||||||||||||||    
T  43344375 ttgtttcaaaatgaatgtcaccttatattttcaatacaactttaa 43344331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 45148106 - 45148062
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  45148106 ttgttttaaaatgaatgtcactttacattttcaataaaactttaa 45148062  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 70609 - 70531
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaannnnnnncttctaactttacccttgataaatact 273  Q
    |||||||||||| ||||||||||||||||| |||| |||||||||       |||| |||||||||||  |||||||||    
T  70609 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatact 70531  T

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Target: scaffold0194 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 8156 - 8200
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  8156 ttgtttcaaaatgaatgtcaatttacattttcaatacaactttaa 8200  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 321724 - 321768
Alignment:
Q  195 ttgtttcaaaataaatgtcactttacatttacaatacaactttaa 239  Q
    |||||| ||||| |||||| |||||||||| ||||||||||||||    
T  321724 ttgttttaaaatgaatgtcgctttacatttccaatacaactttaa 321768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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