View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8381_low_2 (Length: 594)

Name: NF8381_low_2
Description: NF8381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8381_low_2
NF8381_low_2
[»] chr8 (62 HSPs)
chr8 (18-577)||(16611372-16611914)
chr8 (225-312)||(39432342-39432429)
chr8 (271-332)||(39855149-39855210)
chr8 (244-312)||(30500481-30500549)
chr8 (225-311)||(16935576-16935667)
chr8 (224-320)||(2800011-2800108)
chr8 (225-320)||(1588760-1588856)
chr8 (260-316)||(6978849-6978905)
chr8 (275-350)||(33570407-33570480)
chr8 (261-332)||(4604347-4604417)
chr8 (260-334)||(13702346-13702418)
chr8 (225-334)||(33982183-33982291)
chr8 (236-291)||(43554454-43554509)
chr8 (260-338)||(43874967-43875043)
chr8 (242-332)||(7345439-7345529)
chr8 (225-319)||(14011045-14011139)
chr8 (244-334)||(22847254-22847344)
chr8 (260-321)||(3747861-3747922)
chr8 (224-320)||(10292344-10292441)
chr8 (257-345)||(44070351-44070437)
chr8 (235-315)||(216158-216238)
chr8 (235-315)||(692718-692798)
chr8 (235-315)||(696927-697007)
chr8 (235-315)||(729781-729861)
chr8 (235-315)||(853676-853756)
chr8 (225-320)||(2696526-2696622)
chr8 (254-334)||(6325293-6325372)
chr8 (237-349)||(11900572-11900683)
chr8 (260-320)||(22426430-22426490)
chr8 (235-319)||(29653058-29653142)
chr8 (237-289)||(31154763-31154815)
chr8 (260-334)||(6064406-6064478)
chr8 (260-334)||(9524986-9525058)
chr8 (260-334)||(10199736-10199808)
chr8 (280-350)||(13537289-13537357)
chr8 (280-350)||(13626837-13626905)
chr8 (263-306)||(16449160-16449203)
chr8 (225-316)||(23239120-23239209)
chr8 (260-334)||(24074535-24074607)
chr8 (260-334)||(24608477-24608549)
chr8 (236-320)||(31129309-31129391)
chr8 (260-334)||(34073233-34073305)
chr8 (260-334)||(43468699-43468771)
chr8 (260-314)||(2376547-2376601)
chr8 (228-321)||(13762517-13762610)
chr8 (242-319)||(16808367-16808445)
chr8 (225-334)||(18123854-18123964)
chr8 (226-315)||(26657851-26657941)
chr8 (257-334)||(26900445-26900520)
chr8 (243-320)||(35253830-35253907)
chr8 (237-319)||(36593200-36593282)
chr8 (260-321)||(15042370-15042431)
chr8 (225-334)||(24572843-24572952)
chr8 (226-319)||(28979021-28979114)
chr8 (225-320)||(38790578-38790675)
chr8 (261-321)||(5184892-5184952)
chr8 (235-315)||(12560036-12560115)
chr8 (260-316)||(27558881-27558936)
chr8 (263-319)||(29090167-29090223)
chr8 (260-334)||(34797167-34797238)
chr8 (237-320)||(35301169-35301253)
chr8 (244-319)||(37288113-37288189)
[»] scaffold0119 (1 HSPs)
scaffold0119 (221-350)||(1029-1158)
[»] chr6 (39 HSPs)
chr6 (221-350)||(26669635-26669764)
chr6 (235-319)||(32540958-32541042)
chr6 (236-333)||(6455458-6455555)
chr6 (244-319)||(3029979-3030054)
chr6 (260-350)||(15288933-15289021)
chr6 (225-332)||(25064663-25064770)
chr6 (222-319)||(6143955-6144052)
chr6 (242-319)||(30668191-30668268)
chr6 (225-320)||(9064859-9064955)
chr6 (235-315)||(30833021-30833101)
chr6 (236-319)||(6219359-6219441)
chr6 (257-334)||(753306-753381)
chr6 (246-332)||(1488103-1488189)
chr6 (225-319)||(22730709-22730803)
chr6 (235-334)||(5134428-5134526)
chr6 (242-315)||(8253602-8253674)
chr6 (260-321)||(9438331-9438392)
chr6 (260-332)||(9491731-9491801)
chr6 (224-320)||(14981708-14981805)
chr6 (224-319)||(8175989-8176084)
chr6 (260-334)||(19165380-19165451)
chr6 (261-320)||(29284148-29284207)
chr6 (257-334)||(2970215-2970290)
chr6 (261-350)||(6530182-6530269)
chr6 (217-311)||(9031752-9031846)
chr6 (237-349)||(12311380-12311491)
chr6 (226-320)||(19135924-19136018)
chr6 (235-320)||(24470397-24470483)
chr6 (287-317)||(31122148-31122178)
chr6 (225-339)||(34524869-34524983)
chr6 (263-304)||(4408393-4408434)
chr6 (242-315)||(4844154-4844227)
chr6 (242-315)||(9422844-9422917)
chr6 (226-319)||(12341416-12341509)
chr6 (242-315)||(24256927-24257000)
chr6 (260-321)||(26528596-26528657)
chr6 (242-290)||(14949056-14949104)
chr6 (263-303)||(30885565-30885605)
chr6 (235-334)||(35190767-35190864)
[»] chr4 (66 HSPs)
chr4 (242-350)||(37997822-37997930)
chr4 (236-319)||(23935033-23935116)
chr4 (225-315)||(29785144-29785234)
chr4 (227-332)||(16293947-16294051)
chr4 (225-334)||(49039437-49039546)
chr4 (242-289)||(2942195-2942242)
chr4 (260-319)||(45011406-45011465)
chr4 (273-334)||(30295555-30295614)
chr4 (273-334)||(30324457-30324516)
chr4 (242-320)||(32690119-32690197)
chr4 (224-320)||(15640449-15640546)
chr4 (229-334)||(20610737-20610842)
chr4 (224-320)||(28520737-28520834)
chr4 (224-320)||(48968216-48968313)
chr4 (225-350)||(54854155-54854280)
chr4 (257-321)||(6330941-6331005)
chr4 (236-332)||(21023346-21023441)
chr4 (225-320)||(40150466-40150562)
chr4 (235-315)||(49319397-49319477)
chr4 (225-312)||(53815689-53815777)
chr4 (257-335)||(6637715-6637791)
chr4 (260-350)||(9285637-9285725)
chr4 (260-315)||(9924885-9924940)
chr4 (225-334)||(12820399-12820507)
chr4 (260-338)||(38433340-38433416)
chr4 (260-334)||(52560793-52560865)
chr4 (260-319)||(56546456-56546515)
chr4 (235-320)||(8690217-8690303)
chr4 (235-349)||(54264932-54265046)
chr4 (260-321)||(3442872-3442933)
chr4 (236-320)||(14149797-14149882)
chr4 (242-319)||(21752809-21752886)
chr4 (254-319)||(33076553-33076618)
chr4 (225-334)||(41492491-41492599)
chr4 (225-320)||(9692955-9693051)
chr4 (235-334)||(20753119-20753216)
chr4 (235-319)||(27921900-27921984)
chr4 (257-321)||(34684594-34684658)
chr4 (260-320)||(52031236-52031296)
chr4 (242-333)||(6481577-6481668)
chr4 (260-334)||(26203781-26203853)
chr4 (260-291)||(27296851-27296882)
chr4 (225-334)||(36008268-36008376)
chr4 (260-334)||(37032173-37032245)
chr4 (225-319)||(42411461-42411556)
chr4 (260-334)||(47017940-47018012)
chr4 (260-338)||(53697970-53698046)
chr4 (260-334)||(56314790-56314862)
chr4 (253-319)||(295292-295358)
chr4 (235-319)||(9062180-9062266)
chr4 (249-291)||(15507564-15507606)
chr4 (242-315)||(18740927-18741001)
chr4 (225-319)||(36257688-36257782)
chr4 (273-311)||(41137907-41137945)
chr4 (260-321)||(548892-548953)
chr4 (260-321)||(32885717-32885778)
chr4 (244-320)||(36954149-36954226)
chr4 (225-321)||(48512192-48512289)
chr4 (257-289)||(15638712-15638744)
chr4 (260-316)||(29269325-29269381)
chr4 (263-303)||(31852608-31852648)
chr4 (259-319)||(32048566-32048626)
chr4 (260-339)||(34773672-34773749)
chr4 (273-350)||(35747456-35747535)
chr4 (260-292)||(43142532-43142564)
chr4 (255-319)||(52556682-52556746)
[»] chr3 (63 HSPs)
chr3 (242-350)||(33533214-33533322)
chr3 (242-334)||(34407082-34407174)
chr3 (242-319)||(16985031-16985108)
chr3 (225-320)||(10959126-10959222)
chr3 (209-349)||(49299217-49299356)
chr3 (235-314)||(7020778-7020857)
chr3 (225-315)||(31108771-31108861)
chr3 (242-334)||(24160520-24160612)
chr3 (260-334)||(13539958-13540030)
chr3 (237-332)||(36844323-36844418)
chr3 (260-334)||(43566790-43566862)
chr3 (237-334)||(43774190-43774286)
chr3 (221-334)||(47191362-47191474)
chr3 (260-319)||(50724396-50724455)
chr3 (260-319)||(50788393-50788452)
chr3 (225-350)||(24130553-24130678)
chr3 (235-319)||(38507652-38507734)
chr3 (225-320)||(9624976-9625072)
chr3 (225-320)||(27183687-27183783)
chr3 (257-321)||(37279653-37279717)
chr3 (225-332)||(23025891-23025998)
chr3 (260-334)||(33206786-33206858)
chr3 (260-345)||(49146113-49146196)
chr3 (224-304)||(3784062-3784143)
chr3 (274-350)||(18399630-18399704)
chr3 (242-315)||(28951877-28951950)
chr3 (254-319)||(31902212-31902277)
chr3 (235-319)||(36331733-36331818)
chr3 (224-320)||(38555034-38555130)
chr3 (260-321)||(49019212-49019273)
chr3 (225-320)||(14868678-14868774)
chr3 (272-320)||(31419624-31419672)
chr3 (225-320)||(42823991-42824087)
chr3 (263-315)||(50676878-50676930)
chr3 (242-305)||(6284888-6284951)
chr3 (260-334)||(13616068-13616140)
chr3 (263-306)||(13638237-13638280)
chr3 (260-334)||(14417897-14417969)
chr3 (242-309)||(19149435-19149502)
chr3 (235-290)||(23237366-23237421)
chr3 (260-334)||(32508788-32508860)
chr3 (235-334)||(40160739-40160838)
chr3 (260-334)||(48173315-48173387)
chr3 (236-334)||(32080060-32080158)
chr3 (228-290)||(34136760-34136822)
chr3 (273-350)||(54983683-54983758)
chr3 (242-291)||(3461759-3461808)
chr3 (265-306)||(7938288-7938329)
chr3 (280-321)||(16006511-16006552)
chr3 (245-334)||(16999942-17000031)
chr3 (267-312)||(35280697-35280742)
chr3 (260-321)||(35483298-35483359)
chr3 (225-350)||(40956663-40956788)
chr3 (273-306)||(42920639-42920672)
chr3 (266-311)||(45583477-45583522)
chr3 (280-321)||(50144611-50144652)
chr3 (264-320)||(24559422-24559478)
chr3 (260-316)||(27066639-27066695)
chr3 (260-320)||(28226193-28226253)
chr3 (235-319)||(31680736-31680820)
chr3 (242-306)||(32429761-32429825)
chr3 (263-315)||(43897634-43897686)
chr3 (260-312)||(54295235-54295287)
[»] chr7 (48 HSPs)
chr7 (225-350)||(43635582-43635707)
chr7 (225-312)||(16814691-16814778)
chr7 (225-319)||(45267933-45268027)
chr7 (250-319)||(33236274-33236343)
chr7 (260-316)||(924302-924358)
chr7 (235-319)||(10474519-10474603)
chr7 (228-315)||(1513484-1513571)
chr7 (260-334)||(30152770-30152842)
chr7 (235-320)||(31475846-31475932)
chr7 (261-334)||(43902530-43902601)
chr7 (235-307)||(7465470-7465542)
chr7 (225-320)||(14818371-14818467)
chr7 (225-320)||(15265369-15265465)
chr7 (224-334)||(21285347-21285456)
chr7 (225-320)||(41139080-41139176)
chr7 (225-320)||(41417281-41417377)
chr7 (255-349)||(24579263-24579357)
chr7 (257-334)||(47403582-47403656)
chr7 (225-350)||(7392282-7392407)
chr7 (242-319)||(23799311-23799388)
chr7 (237-334)||(48174973-48175069)
chr7 (237-320)||(8742654-8742738)
chr7 (260-320)||(19126766-19126826)
chr7 (245-349)||(32309125-32309229)
chr7 (235-315)||(35195847-35195927)
chr7 (254-350)||(42976576-42976672)
chr7 (260-334)||(2366386-2366458)
chr7 (225-334)||(29658266-29658374)
chr7 (260-334)||(30644198-30644270)
chr7 (263-306)||(47641080-47641123)
chr7 (254-316)||(11808061-11808123)
chr7 (273-315)||(14707334-14707376)
chr7 (226-312)||(48053144-48053230)
chr7 (242-319)||(9351045-9351122)
chr7 (260-321)||(22965963-22966024)
chr7 (260-313)||(23685567-23685620)
chr7 (237-290)||(26560015-26560068)
chr7 (260-321)||(38025370-38025431)
chr7 (242-350)||(43712289-43712397)
chr7 (280-340)||(8725125-8725184)
chr7 (236-332)||(10020463-10020559)
chr7 (260-312)||(25711145-25711197)
chr7 (274-334)||(26734263-26734323)
chr7 (235-311)||(32814831-32814907)
chr7 (260-339)||(35368425-35368502)
chr7 (242-334)||(35498409-35498500)
chr7 (260-316)||(36315984-36316040)
chr7 (263-315)||(48525609-48525661)
[»] chr1 (64 HSPs)
chr1 (235-332)||(9769574-9769671)
chr1 (235-350)||(16182813-16182928)
chr1 (225-319)||(2643822-2643916)
chr1 (225-334)||(9768801-9768910)
chr1 (225-350)||(195038-195163)
chr1 (226-319)||(5684117-5684209)
chr1 (225-334)||(41677054-41677163)
chr1 (235-315)||(43020615-43020695)
chr1 (260-334)||(749581-749652)
chr1 (235-334)||(3341728-3341827)
chr1 (261-316)||(4616903-4616958)
chr1 (260-334)||(15774306-15774378)
chr1 (225-318)||(29491463-29491557)
chr1 (264-349)||(3797888-3797972)
chr1 (226-311)||(8758384-8758468)
chr1 (272-321)||(25421895-25421944)
chr1 (254-334)||(4288611-4288691)
chr1 (255-319)||(24168586-24168650)
chr1 (247-319)||(26349986-26350057)
chr1 (260-316)||(30649122-30649178)
chr1 (260-316)||(49251405-49251461)
chr1 (242-333)||(50501871-50501961)
chr1 (244-286)||(42234564-42234606)
chr1 (236-306)||(42801884-42801954)
chr1 (225-315)||(48260200-48260290)
chr1 (237-319)||(50575907-50575989)
chr1 (225-334)||(1721134-1721243)
chr1 (260-321)||(11802025-11802086)
chr1 (254-319)||(12047963-12048028)
chr1 (235-315)||(28283963-28284041)
chr1 (237-320)||(17350066-17350150)
chr1 (225-320)||(25819178-25819274)
chr1 (235-335)||(27654996-27655096)
chr1 (273-317)||(32635182-32635226)
chr1 (225-320)||(39238709-39238805)
chr1 (225-320)||(40678816-40678912)
chr1 (235-334)||(11238020-11238119)
chr1 (260-334)||(11405485-11405557)
chr1 (295-350)||(19866539-19866594)
chr1 (280-334)||(32711138-32711190)
chr1 (225-319)||(7906333-7906427)
chr1 (237-315)||(12980990-12981068)
chr1 (225-339)||(18003810-18003924)
chr1 (260-345)||(24662011-24662094)
chr1 (260-333)||(42831976-42832047)
chr1 (235-332)||(4146338-4146435)
chr1 (223-334)||(9527417-9527527)
chr1 (225-318)||(9931081-9931174)
chr1 (257-333)||(11213444-11213518)
chr1 (228-320)||(13870087-13870180)
chr1 (260-321)||(17064272-17064333)
chr1 (260-321)||(21884604-21884665)
chr1 (250-315)||(27412974-27413039)
chr1 (230-319)||(37693907-37693996)
chr1 (249-334)||(47355759-47355843)
chr1 (235-304)||(47645818-47645887)
chr1 (242-315)||(50199487-50199560)
chr1 (260-316)||(17056890-17056946)
chr1 (263-315)||(19424078-19424130)
chr1 (44-72)||(19587668-19587696)
chr1 (236-319)||(23758259-23758343)
chr1 (260-316)||(28916928-28916984)
chr1 (225-320)||(38021245-38021341)
chr1 (224-312)||(52961096-52961184)
[»] chr5 (55 HSPs)
chr5 (223-319)||(33599901-33599997)
chr5 (223-319)||(3535943-3536039)
chr5 (242-319)||(17557041-17557117)
chr5 (250-347)||(40384270-40384367)
chr5 (225-320)||(1463864-1463960)
chr5 (237-309)||(5598764-5598836)
chr5 (225-334)||(6806634-6806742)
chr5 (242-312)||(24653154-24653223)
chr5 (251-332)||(18101943-18102024)
chr5 (260-316)||(28378075-28378131)
chr5 (260-334)||(1244721-1244793)
chr5 (260-334)||(14487590-14487662)
chr5 (260-335)||(19608642-19608717)
chr5 (235-334)||(31556822-31556921)
chr5 (235-320)||(4674821-4674907)
chr5 (242-315)||(20186877-20186948)
chr5 (260-333)||(20762310-20762381)
chr5 (224-334)||(27006333-27006443)
chr5 (242-319)||(4985770-4985847)
chr5 (236-320)||(20735181-20735266)
chr5 (260-321)||(33800922-33800983)
chr5 (260-316)||(843378-843434)
chr5 (235-347)||(11246473-11246585)
chr5 (260-312)||(27278768-27278820)
chr5 (260-320)||(36045140-36045200)
chr5 (260-332)||(38129007-38129079)
chr5 (260-334)||(7234866-7234938)
chr5 (260-315)||(17137878-17137933)
chr5 (261-312)||(24651166-24651217)
chr5 (225-319)||(37303927-37304022)
chr5 (280-338)||(38618671-38618727)
chr5 (260-334)||(42455388-42455460)
chr5 (242-319)||(6447487-6447565)
chr5 (273-315)||(20191483-20191525)
chr5 (274-316)||(31200832-31200874)
chr5 (254-312)||(32252933-32252991)
chr5 (230-312)||(41405102-41405184)
chr5 (273-318)||(930946-930991)
chr5 (260-317)||(18872550-18872607)
chr5 (260-313)||(22647169-22647222)
chr5 (253-350)||(22738549-22738646)
chr5 (225-310)||(25660906-25660991)
chr5 (260-321)||(33729807-33729868)
chr5 (225-350)||(42553117-42553241)
chr5 (236-276)||(1345380-1345420)
chr5 (237-316)||(9963421-9963501)
chr5 (235-311)||(10106634-10106710)
chr5 (261-321)||(15978682-15978742)
chr5 (265-305)||(16280283-16280323)
chr5 (263-311)||(18175239-18175287)
chr5 (272-320)||(18303084-18303132)
chr5 (263-299)||(18597444-18597480)
chr5 (260-350)||(26168992-26169078)
chr5 (257-321)||(30403776-30403840)
chr5 (242-350)||(34325276-34325384)
[»] chr2 (51 HSPs)
chr2 (242-334)||(29713081-29713173)
chr2 (242-350)||(39334857-39334965)
chr2 (235-334)||(1244573-1244672)
chr2 (224-350)||(34107267-34107393)
chr2 (257-316)||(23683722-23683781)
chr2 (257-334)||(8234786-8234861)
chr2 (265-347)||(37516024-37516106)
chr2 (235-320)||(44187707-44187793)
chr2 (242-315)||(32288387-32288460)
chr2 (260-316)||(10262768-10262824)
chr2 (370-462)||(15790159-15790250)
chr2 (243-315)||(20942120-20942192)
chr2 (235-345)||(2114418-2114526)
chr2 (260-334)||(3179353-3179425)
chr2 (225-334)||(11133069-11133177)
chr2 (235-334)||(12206502-12206601)
chr2 (260-334)||(18386806-18386878)
chr2 (260-334)||(19905649-19905721)
chr2 (260-350)||(34620547-34620635)
chr2 (245-334)||(10602019-10602109)
chr2 (242-312)||(36190065-36190135)
chr2 (236-320)||(32527083-32527168)
chr2 (260-313)||(36520793-36520846)
chr2 (225-320)||(2304283-2304379)
chr2 (266-318)||(15625295-15625347)
chr2 (260-312)||(24034067-24034119)
chr2 (255-315)||(25406661-25406721)
chr2 (225-320)||(29034969-29035065)
chr2 (260-339)||(30474184-30474261)
chr2 (243-319)||(45110201-45110277)
chr2 (260-334)||(580777-580849)
chr2 (267-318)||(6339917-6339968)
chr2 (235-298)||(8080698-8080761)
chr2 (235-286)||(17896829-17896880)
chr2 (260-334)||(20122469-20122541)
chr2 (242-329)||(35694777-35694863)
chr2 (260-334)||(36426850-36426922)
chr2 (260-334)||(44721698-44721770)
chr2 (260-333)||(9796926-9796997)
chr2 (225-315)||(22355077-22355167)
chr2 (225-291)||(36277737-36277803)
chr2 (263-300)||(5062332-5062369)
chr2 (274-319)||(6952315-6952360)
chr2 (263-316)||(11837021-11837074)
chr2 (260-321)||(17154678-17154739)
chr2 (281-350)||(29896137-29896206)
chr2 (263-312)||(30392818-30392867)
chr2 (242-331)||(42211531-42211620)
chr2 (235-315)||(18089733-18089813)
chr2 (260-316)||(20208890-20208945)
chr2 (273-321)||(34018075-34018123)
[»] scaffold0178 (1 HSPs)
scaffold0178 (257-333)||(4349-4423)
[»] scaffold0112 (1 HSPs)
scaffold0112 (224-319)||(17938-18034)
[»] scaffold1990 (1 HSPs)
scaffold1990 (260-334)||(923-995)
[»] scaffold0092 (1 HSPs)
scaffold0092 (260-334)||(47311-47383)
[»] scaffold0036 (1 HSPs)
scaffold0036 (225-311)||(25019-25106)
[»] scaffold0009 (1 HSPs)
scaffold0009 (244-319)||(62726-62801)
[»] scaffold0070 (1 HSPs)
scaffold0070 (223-320)||(12556-12654)
[»] scaffold2098 (1 HSPs)
scaffold2098 (225-321)||(619-715)
[»] scaffold0045 (1 HSPs)
scaffold0045 (243-319)||(30906-30983)
[»] scaffold0343 (1 HSPs)
scaffold0343 (260-316)||(8589-8645)
[»] scaffold0002 (1 HSPs)
scaffold0002 (237-332)||(440405-440500)
[»] scaffold0227 (1 HSPs)
scaffold0227 (222-319)||(21840-21937)
[»] scaffold0168 (1 HSPs)
scaffold0168 (225-319)||(34040-34134)
[»] scaffold0809 (1 HSPs)
scaffold0809 (224-320)||(4812-4908)
[»] scaffold0025 (1 HSPs)
scaffold0025 (263-312)||(65773-65822)
[»] scaffold0011 (1 HSPs)
scaffold0011 (273-349)||(234713-234787)
[»] scaffold0054 (1 HSPs)
scaffold0054 (235-315)||(67165-67245)


Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 18 - 577
Target Start/End: Original strand, 16611372 - 16611914
Alignment:
Q  18 atcaatgtatgaaagtttatctttcagattcaaagagaatttctttggggtggaagtgtattgggaagacttgcggagtgtcgagtgcgaacacgagttc 117  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16611372 atcaatgtatgaaagttcatcattcagattcaaagagaatttctttcgggtggaagtgtattgggaagacttgcggagtgtcgagtgtgaacacgagttc 16611471  T
Q  118 aatgccggtaaaccgctagcttgccattatgtgttgaaatgccaacacctcatgtattgcacatgtattttgttattagttttcaattattagaaagtca 217  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16611472 aatgccgttaaaccgctagcttgccattatgtgttgaaatgccaacacctcatgtattgcacatgtattttgttattagttttaaattattagaaagtca 16611571  T
Q  218 agtttgagtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaa 317  Q
    ||||||||||||| |  |||||||||||||||||| ||||| ||||||||||| ||||||||| ||||         ||||||||||||||||||         
T  16611572 agtttgagtccctatcagcatagatcagttggcagggacatgcattattatatgtaggggttgaggtt---------gacactccacttattcac----- 16611657  T
Q  318 aagggatgaattctagcaactgaactacttgacnnnnnnntcaagtttgattgtttcttccacttcttaaagacatgcaagcttagtataattgttaaaa 417  Q
       |||||||||||||| |||| |||||| |||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16611658 ---ggatgaattctagccactgtactactagacaaaaaaatcaagtttgattgtttcttccacttcttaaagacatgcaagcttagtataattgttaaaa 16611754  T
Q  418 cacaaaaatttgaaaattcataagctactctaaacttgtcccacttgacgttcaagtgggtttgcaggaatgtgtacaagttaatagataaactcacaat 517  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16611755 cacaaaaatttgaaaaatcataagctactctaaacttgtcccacttgacgttcaagtgggtttgcaggaatgtggacaagttaatagataaactcacaat 16611854  T
Q  518 tggtggatttgttcgtttgaaacatatctttggattcaattcaggtttttgggttgtaat 577  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16611855 tggtggatttgttcgtttgaaacatatctttggattcaattcaggtttttgggttgtaat 16611914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 39432429 - 39432342
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||| ||| |||||| ||||||||||| ||||| || | ||||||  ||||||||||||||||||| ||||||| ||||||||||||    
T  39432429 gtccccgtgagcatagctcagttggcagggacatgcaatgttatatgcaggggttggggttcgaacctcagacaccccacttattcac 39432342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 39855210 - 39855149
Alignment:
Q  271 ataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||  |||||||||||    
T  39855210 ataggggttggggtttgaacctcagacactccacttatttaccttaaaaaagatgaattcta 39855149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 30500481 - 30500549
Alignment:
Q  244 agttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||  | |||  |||||||||||||    
T  30500481 agttggcagagacatgcattattatatgtaggggttggggttcgaactccggaccatccacttattcac 30500549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 16935576 - 16935667
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-----tacattattatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    |||||||||  ||||  ||||||||||||||||     || ||||||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  16935576 gtccctgtgaacatatctcagttggcagagacatgcattatattattatatacaggggttggggttcgaaccccagacaccccacttattca 16935667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 2800011 - 2800108
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  2800011 agtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 2800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 1588760 - 1588856
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||| |||||| | ||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  1588760 gtccctgtgagcatagcttagttggcagggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcactttaaaag 1588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 6978849 - 6978905
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  |||||||||||||||||||||  |||||||| ||||||||||||    
T  6978849 cattattatatgcaggggttggggttcgaaccacgaacactccatttattcacctta 6978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 33570480 - 33570407
Alignment:
Q  275 gggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||| |||||||||||| | ||||| |||||||||||||||| ||||  ||||||||||| ||| |||||||||||    
T  33570480 gggtcggggttcgaacctcggacaccccacttattcaccttataagg--tgaattctagccactaaactacttgac 33570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 261 - 332
Target Start/End: Complemental strand, 4604417 - 4604347
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||||||||||| || | |||||||||||| |  ||||||||||||||||||||||||  |||||||||||    
T  4604417 attattatatataagg-tcggggttcgaaccccgaacactccacttattcaccttaaaaaagatgaattcta 4604347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 13702418 - 13702346
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| |||||||||||| |||||||  ||||||||||||||| ||||  |||||||||||    
T  13702418 cattattatatgcaggggtcggggttcgaacctcagacacctcacttattcaccttataagg--tgaattctagc 13702346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 33982183 - 33982291
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacat-acattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    ||||| ||| |||||| ||||||| |||| |||| ||||| ||||||  |||||| |||||||||||| |||||||  ||||||||||| ||| ||||      
T  33982183 gtccccgtgagcatagctcagttgacagaaacattacattgttatatgcaggggtcggggttcgaaccccagacaccgcacttattcactttataagg-- 33982280  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  33982281 tgaattctagc 33982291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 43554454 - 43554509
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaacc 291  Q
    ||||| ||||||||||| ||||| |||| |||||| ||||||||||||||||||||    
T  43554454 catagctcagttggcagcgacatccattgttatatgtaggggttggggttcgaacc 43554509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 43875043 - 43874967
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaact 338  Q
    ||||||||||| |||||| || |||||||||  ||||||| |||||||||||||||| ||||  ||||||||| |||||    
T  43875043 cattattatatgtaggggctgaggttcgaacaccagacaccccacttattcaccttataagg--tgaattctaacaact 43874967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 332
Target Start/End: Original strand, 7345439 - 7345529
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||||||||| ||||| |||||||||||  |||||| ||| ||| |||  || |||| |||||||||||||||||||  | |||||||||    
T  7345439 tcagttggcagggacatgcattattatatgcaggggtcgggcttccaactccaaacaccccacttattcaccttaaaaaaggtgaattcta 7345529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 14011139 - 14011045
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||| |||||| ||||||||||| ||||| |||| ||||||  |||||  || ||||||||| | ||||  ||||||||||| |||||||    
T  14011139 gtccctgtgagcatagttcagttggcagggacatgcattgttatatgcaggggccggagttcgaacctcggacatcccacttattcatcttaaaa 14011045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 334
Target Start/End: Complemental strand, 22847344 - 22847254
Alignment:
Q  244 agttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||| ||||| |||| ||||||  |||||| | |||||||||| || ||||  ||||||||||||||||||  | |||||||||||    
T  22847344 agttggcagggacatgcattgttatatgcaggggtcgaggttcgaaccccacacacctcacttattcaccttaaaaaaggtgaattctagc 22847254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 3747922 - 3747861
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||||||||||||| ||||| || | ||||||| | |||||||||||||| ||||    
T  3747922 cattattatatataggggttgtggttcaaatcccagacaccctacttattcaccttataagg 3747861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 10292344 - 10292441
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||| ||||||||||| |||| | |||||||||||  ||||| || | |||||||| | ||||| |||||||||||| |||||||    
T  10292344 agtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctgagattcgaacctcggacaccccacttattcactttaaaag 10292441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 44070437 - 44070351
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactac 345  Q
    |||||||||||||| ||||||  | |||||||||| | ||||| | |||||||||||||| ||||  ||||||||||| ||| ||||||    
T  44070437 atacattattatatgtaggggccgcggttcgaacctcggacaccctacttattcaccttataagg--tgaattctagccactaaactac 44070351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 216238 - 216158
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||| |||||||||| ||||||  || |||  ||||||||| ||| |||||  ||||||||||||||    
T  216238 gcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcacctt 216158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 692798 - 692718
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||| |||||||||| ||||||  || |||  ||||||||| ||| |||||  ||||||||||||||    
T  692798 gcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcacctt 692718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 697007 - 696927
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||| |||||||||| ||||||  || |||  ||||||||| ||| |||||  ||||||||||||||    
T  697007 gcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcacctt 696927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 729861 - 729781
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||| |||||||||| ||||||  || |||  ||||||||| ||| |||||  ||||||||||||||    
T  729861 gcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcacctt 729781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 853756 - 853676
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||| |||||||||| ||||||  || |||  ||||||||| ||| |||||  ||||||||||||||    
T  853756 gcatagctcagttggcagggacatacattgttatatgcagaggtcagggttcgaatcacggacacctcacttattcacctt 853676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 2696526 - 2696622
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||  ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  2696526 gtccccgtgagcataactcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 2696622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 334
Target Start/End: Original strand, 6325293 - 6325372
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||| |||||||  ||||||||||||| ||||| ||||||| ||||| ||||||||| |||  | |||||||||||    
T  6325293 gacatacataattatatgcaggggttggggtttgaacc-cagacaccccactcattcaccttgaaaaaggtgaattctagc 6325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 349
Target Start/End: Original strand, 11900572 - 11900683
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaa 336  Q
    |||| |||||||||||  |||| |||||||||||  |||||||| |||| ||| |||||| || ||||||||||| ||| |||  | ||||||||||| |    
T  11900572 atagctcagttggcaggaacatgcattattatatgcaggggttgaggtttgaa-cacagataccccacttattcatcttgaaaaaggtgaattctagcca 11900670  T
Q  337 ctgaactacttga 349  Q
    || ||||| ||||    
T  11900671 ctaaactatttga 11900683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 22426430 - 22426490
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||||| ||||||||| |||||||||| | ||||| ||| |||||||| |||||||    
T  22426430 cattattatatgtaggggttgaggttcgaacccctgacaccccatttattcactttaaaag 22426490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 29653058 - 29653142
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| ||| ||||||| ||||| |||||||||||  |||| | | |||||||||  | | |||||||||||||||||||||||    
T  29653058 gcatagttcaattggcagggacatgcattattatatgcagggatcgtggttcgaactcctgccactccacttattcaccttaaaa 29653142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 31154763 - 31154815
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaa 289  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||| |||||||    
T  31154763 atagttcagttggtagatacatacattattatatatagaggttggagttcgaa 31154815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 6064406 - 6064478
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| |||||||||||| | |||||| |||||||||| |||| ||||  |||||||||||    
T  6064406 cattattatatgcaggggtcggggttcgaacctcggacacttcacttattcagcttataagg--tgaattctagc 6064478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 9524986 - 9525058
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  |||||||||||| ||||||| | |||||||||||||| ||||  |||||||||||    
T  9524986 cattattatatgcaggggccggggttcgaaccccagacaccctacttattcaccttataagg--tgaattctagc 9525058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 10199808 - 10199736
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  |||||||||||| || |||| |||||||||||||||| ||||  |||||||||||    
T  10199808 cattattatatgcaggggccggggttcgaaccccaaacaccccacttattcaccttataagg--tgaattctagc 10199736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 13537357 - 13537289
Alignment:
Q  280 ggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||||||||| ||||||| ||||||||||| |||| ||||  |||||| |||| ||| |||||||||||    
T  13537357 ggggttcgaaccccagacaccccacttattcatcttataagg--tgaattgtagccactaaactacttgac 13537289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 350
Target Start/End: Complemental strand, 13626905 - 13626837
Alignment:
Q  280 ggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||||||||| ||||||| ||||||||||| |||| ||||  |||||| |||| ||| |||||||||||    
T  13626905 ggggttcgaaccccagacaccccacttattcatcttataagg--tgaattgtagccactaaactacttgac 13626837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 16449160 - 16449203
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccactt 306  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||    
T  16449160 tattatatgcaggggttggggttcgaaccccagacactccactt 16449203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 23239120 - 23239209
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||| ||| |||||| ||||| |||||||||||  ||| |||||| ||||||| |||||| ||||| | ||||| ||||||||||||||||    
T  23239120 gtccccgtgagcatagctcagt-ggcagagacatt-attgttatatgtaggggtcggggtttgaaccccggacaccccacttattcacctta 23239209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 24074535 - 24074607
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| |||||||||  ||||||||| | |||||  ||||||||||||||| ||||  |||||||||||    
T  24074535 cattattatatgtaggggttgaagttcgaacctcggacacctcacttattcaccttataagg--tgaattctagc 24074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 24608549 - 24608477
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  |||||||||||| ||||||| | |||||||||||||| ||||  |||||||||||    
T  24608549 cattattatatgcaggggccggggttcgaaccccagacaccctacttattcaccttataagg--tgaattctagc 24608477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 31129309 - 31129391
Alignment:
Q  236 catagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||||||||||| |||| | |||||||||||   ||||| |||||||||||| | ||||| |||||||||||| |||||||    
T  31129309 catagctcagttggcagggacaatgcattattatat---ggggtcggggttcgaaccccggacaccccacttattcactttaaaag 31129391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 34073305 - 34073233
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| |||||||   |||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  34073305 cattattatatgtaggggtcaaggttcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 34073233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 43468771 - 43468699
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||| |||||| ||||||| |||||||||||  | ||||| |||||||||||||||| ||||  |||||||||||    
T  43468771 cattgttatatgtaggggtcggggttcgaactccggacaccccacttattcaccttataagg--tgaattctagc 43468699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 2376547 - 2376601
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacct 314  Q
    |||||||||||  ||||||  ||||||||||| | ||||||||||||||||||||    
T  2376547 cattattatatgcaggggtccgggttcgaacctcggacactccacttattcacct 2376601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 13762610 - 13762517
Alignment:
Q  228 cctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||| |||||| |||||||| || |||| | |||||||||||  ||||||  | ||||||||||| ||||| |||||||||||||||| ||||    
T  13762610 cctgtgagcatagttcagttggtag-gacaatgcattattatatgcaggggtcagtgttcgaaccacggacaccccacttattcaccttacaagg 13762517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 16808445 - 16808367
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttgggg-ttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| |||| ||||| |||||||||||  |||||| |||| |||||||| || |||  |||||||||||||||||||    
T  16808445 tcagttagcagggacatgcattattatatgcaggggtggggggttcgaaccccatacagcccacttattcaccttaaaa 16808367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 18123854 - 18123964
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatat-aggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    ||||| ||| |||||| ||| ||| ||| || ||||||| ||||||   ||||||||||||||||||||   |||| |||||||||| ||||||||  |     
T  18123854 gtccccgtgagcatagttcaattgacagggatatacattgttatattgcaggggttggggttcgaaccatgtacaccccacttattctccttaaaaaagg 18123953  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  18123954 tgaattctagc 18123964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 315
Target Start/End: Original strand, 26657851 - 26657941
Alignment:
Q  226 tccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagaca-ctccacttattcacctt 315  Q
    |||||||| |||||| |||||||| || ||||| |||| ||||||  ||||   |||||||||||| |||||| | |||||||||||||||    
T  26657851 tccctgtgagcatagctcagttggtagggacatgcattgttatatgcagggaccggggttcgaaccccagacacccccacttattcacctt 26657941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 26900445 - 26900520
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||| |||||||||||| ||| ||||| |||| | ||||| ||| ||||||| |||||||||  |||||||||||    
T  26900445 atacattgttatatatagggattgaggttcaaacctcggacaccccatttattcatcttaaaagg--tgaattctagc 26900520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 35253907 - 35253830
Alignment:
Q  243 cagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||||||| |||| ||||||| |||||  ||||||||||||||||| | | ||||| |||||||||||| |||||||    
T  35253907 cagttggcagggacaatacattaatatatgcaggggttggggttcgaatc-cggacaccccacttattcactttaaaag 35253830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 36593200 - 36593282
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| |||||||| || ||||| |||| ||||||| || |||||||||||||| |  |||||  | |||||||||||||||||    
T  36593200 atagctcagttggtagggacatgcattgttatatacagaggttggggttcgaatcttagacatccaacttattcaccttaaaa 36593282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 15042431 - 15042370
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||  |||||||||||| | ||||| |||||||||||||||| ||||    
T  15042431 cattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagg 15042370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 24572952 - 24572843
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| |||||||||||||||||  ||  |||||| ||| ||  ||||||| |||| || ||||  || |||||||||||||||  | |    
T  24572952 gtccccgtgagcatagctcagttggcagagacatgtatcgttatatgtagaggccggggttcaaaccccatacacctcatttattcaccttaaaaatgtt 24572853  T
Q  325 gaattctagc 334  Q
    ||||||||||    
T  24572852 gaattctagc 24572843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 319
Target Start/End: Original strand, 28979021 - 28979114
Alignment:
Q  226 tccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| ||| |||||| |||||||  || ||||| |||| |||||| ||||||| ||  |||||||| | |||||  ||||||||||||||||||    
T  28979021 tccccgtgagcatagttcagttgatagggacatgcattgttatatgtaggggtcggaattcgaaccccggacacctcacttattcaccttaaaa 28979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 38790675 - 38790578
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttgggg-ttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||  ||||||||||| |||| | |||||||||||  |||||  |||| |||||||| ||||||| |||||||||||| |||||||    
T  38790675 gtccccgtgagcataactcagttggcagggacaatgcattattatatgcaggggccgggggttcgaaccccagacaccccacttattcactttaaaag 38790578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 5184952 - 5184892
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||  ||||| |||||||||||||   ||||| |||||||||||||||| ||||    
T  5184952 attattatatgcaggggctggggttcgaaccctggacaccccacttattcaccttataagg 5184892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 12560036 - 12560115
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| |||||||||||  ||| ||||| ||||||  ||||||||||||||||||| || ||||  |||||||| |||||    
T  12560036 gcatagctcagttggcaggaaca-acattgttatatgcaggggttggggttcgaacctcaaacacctcacttatttacctt 12560115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 27558936 - 27558881
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  |||||| ||| |||||||| ||||||| ||||||||||||||||    
T  27558936 cattattatatgcaggggtcgggattcgaacc-cagacaccccacttattcacctta 27558881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 29090167 - 29090223
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||| || |||| |||||||||||| | |||||| |||||||||| |||||||    
T  29090167 tattatatgtaagggtcggggttcgaacctctgacacttcacttattcatcttaaaa 29090223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 34797167 - 34797238
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||||||| |||||||||| |||   || ||||  |||||||||||||||||   |||||||||||||    
T  34797167 cattattatatatagtggttggggtttgaattccaaacacctcacttattcaccttaaa---gatgaattctagc 34797238  T

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Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 320
Target Start/End: Complemental strand, 35301253 - 35301169
Alignment:
Q  237 atagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||| ||||||||||| |||| | |||||||||||  |||||| |||||||||||  | ||||| | |||||||||| |||||||    
T  35301253 atagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaactccggacaccctacttattcactttaaaag 35301169  T

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Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 319
Target Start/End: Complemental strand, 37288189 - 37288113
Alignment:
Q  244 agttggcagagacatacattattatatataggggttggggttcgaa-ccacagacactccacttattcaccttaaaa 319  Q
    |||| |||||||||| |||  |||||| |||||||||||||||||| || ||||||  ||||||||| || ||||||    
T  37288189 agttagcagagacatgcatcgttatatgtaggggttggggttcgaaccctcagacatcccacttatttactttaaaa 37288113  T

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Target: scaffold0119 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 221 - 350
Target Start/End: Original strand, 1029 - 1158
Alignment:
Q  221 ttgagtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||| ||| |||||| |||||||| || ||||| ||| ||||||| |||||| ||||||||||||| ||||||| ||||||||||||||| |||     
T  1029 ttgagtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaa 1128  T
Q  321 ggatgaattctagcaactgaactacttgac 350  Q
     | ||||||||||| ||| |||||||||||    
T  1129 aggtgaattctagccactaaactacttgac 1158  T

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Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 221 - 350
Target Start/End: Complemental strand, 26669764 - 26669635
Alignment:
Q  221 ttgagtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||| ||| |||||| |||||||| || ||||| ||| ||||||| |||||| ||||||||||||| ||||||| ||||||||||||||| |||     
T  26669764 ttgagtccccgtgagcatagctcagttggtagggacatgcataattatatgtaggggctggggttcgaaccccagacaccccacttattcaccttgaaaa 26669665  T
Q  321 ggatgaattctagcaactgaactacttgac 350  Q
     | ||||||||||| ||| |||||||||||    
T  26669664 aggtgaattctagccactaaactacttgac 26669635  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 32541042 - 32540958
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||| || ||||||||  |||| || |||||||||||||||||||    
T  32541042 gcatagttcagttggcagagacatgcattattatatatagaggtcggagttcgaactccagataccccacttattcaccttaaaa 32540958  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 333
Target Start/End: Original strand, 6455458 - 6455555
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    ||||| |||||||| || ||||||||||||||||| || ||| ||||||||||||  | ||||| | ||||||||||||| |||  ||||||||||||    
T  6455458 catagttcagttggtagggacatacattattatatgtatgggctggggttcgaactccggacaccctacttattcaccttgaaaaagatgaattctag 6455555  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 3029979 - 3030054
Alignment:
Q  244 agttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||| |||||| |||||||||| ||| |||||| |||||||||   ||||| |||||||||||||||||||    
T  3029979 agttggcagggacataaattattatatgtagtggttggagttcgaaccctggacaccccacttattcaccttaaaa 3030054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 15289021 - 15288933
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    ||||||||||| |||||| ||||||||||||  ||||||| ||||||||||| |||| ||||  ||||||||||| ||||  |||||||||    
T  15289021 cattattatatgtaggggctggggttcgaactccagacaccccacttattcatcttataagg--tgaattctagccactgtgctacttgac 15288933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 332
Target Start/End: Complemental strand, 25064770 - 25064663
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| |||||||| |  ||||| |||||||||||  ||||||||||||||||||| ||||||| |||||| |||| | |||||  |||    
T  25064770 gtccccgtgagcatagttcagttggtatggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttcttcatcctaaaaaagat 25064671  T
Q  325 gaattcta 332  Q
     |||||||    
T  25064670 aaattcta 25064663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 6143955 - 6144052
Alignment:
Q  222 tgagtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||| ||| |||||| ||||||||||| |||| | ||||||||||| ||||||| ||| |||||||| | ||||| |||||||||||| ||||||    
T  6143955 tgagtccccgtgagcatagctcagttggcagggacaatgcattattatatgtaggggtcggg-ttcgaaccccggacaccccacttattcactttaaaa 6144052  T

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Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 30668268 - 30668191
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||||| |||||| |||||||||||  ||||||  | |||||||||||  |||| |||||||||||||||||||    
T  30668268 tcagttggcatagacatgcattattatatgcaggggtcagagttcgaaccacgaacaccccacttattcaccttaaaa 30668191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 9064859 - 9064955
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| ||||||| ||||||||| || |||||||    
T  9064859 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttatttactttaaaag 9064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 30833021 - 30833101
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||| ||||| |||| ||||||  |||||| |||||||||||| | ||||| |||||||||| ||||    
T  30833021 gcatagttcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattctcctt 30833101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 236 - 319
Target Start/End: Original strand, 6219359 - 6219441
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||||||||||| ||||| |||||||||||| || || | || |||||||| ||||||| |||||||||| ||||||||    
T  6219359 catagctcagttggcagggacatgcattattatatacagtgg-tcggattcgaaccccagacaccccacttattctccttaaaa 6219441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 753381 - 753306
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||||| ||||||| ||||||||||||   ||||| |||||||||| ||||| ||  |||||||||||||    
T  753381 atacattattatatgtaggggtcggggttcgaaccctggacaccccacttattccccttataa--gatgaattctagc 753306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 1488103 - 1488189
Alignment:
Q  246 ttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||||||||||| |||| ||||||  || ||| |||||||||||| || |||| ||| |||||||||||||||  | |||||||||    
T  1488103 ttggcagagacatgcattgttatatgcagaggtcggggttcgaaccccaaacaccccatttattcaccttaaaaatggtgaattcta 1488189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 22730803 - 22730709
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||  ||||||||||||||||| |||| ||||||  ||||  ||  ||||||||| | ||||| |||||||||||||||||||    
T  22730803 gtccccgtgagcataactcagttggcagagacatgcattgttatatgcagggactgaagttcgaacctcggacaccccacttattcaccttaaaa 22730709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 5134526 - 5134428
Alignment:
Q  235 gcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    |||||| |||||||||||||||| | |||| ||||||  || ||  | |||||||||| ||||||| |||||||||||||||| ||||  ||||||||||    
T  5134526 gcatagctcagttggcagagacaatgcattgttatatgcagaggccgcggttcgaacctcagacaccccacttattcaccttataagg--tgaattctag 5134429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 8253674 - 8253602
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||||  ||||| |||| ||||||  ||||| ||||||||||||| ||||||| |||||||||||||||    
T  8253674 tcagttggcatggacatgcattgttatatgcaggggctggggttcgaacc-cagacaccccacttattcacctt 8253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 9438331 - 9438392
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  ||||||||||||||||||| | ||||| ||||| |||||||||| ||||    
T  9438331 cattattatatgcaggggttggggttcgaaccccggacaccccactcattcaccttataagg 9438392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 9491801 - 9491731
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||||||||| ||||||  |||||||||||| | ||||| |||||||||||||||| ||  |||||||||||    
T  9491801 cattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataa--gatgaattcta 9491731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 14981805 - 14981708
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  ||||||||||||   ||||| |||||||||||| |||||||    
T  14981805 agtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccctggacaccccacttattcactttaaaag 14981708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 8175989 - 8176084
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| ||| |||||| ||||||| ||||||||| |||| ||||||  ||||  ||| ||||||||  |  |||| |||||||||||||||||||    
T  8175989 agtccccgtgagcatagctcagttgacagagacatgcattgttatatgcagggactggtgttcgaactccgaacaccccacttattcaccttaaaa 8176084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 19165380 - 19165451
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  || |||||||||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  19165380 cattattatatgcagaggttggggttcgaacc-ccgacaccccacttattcaccttataagg--tgaattctagc 19165451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 29284148 - 29284207
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||||||| ||||| | |||||||||||| | ||||| |||||||||||| |||||||    
T  29284148 attattatatgtagggatcggggttcgaaccccggacaccccacttattcactttaaaag 29284207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 2970215 - 2970290
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||||| ||||||  | ||||| |||| | ||||| |||||||||||||||| ||  |||||||||||||    
T  2970215 atacattattatatgtaggggccgaggttcaaaccccggacaccccacttattcaccttataa--gatgaattctagc 2970290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 6530269 - 6530182
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    ||||||||||  |||||  ||||||| |||| | ||||| |||||||||||||||| ||||  ||||||||||| |||  ||||||||||    
T  6530269 attattatatgcaggggccggggttcaaacctcggacaccccacttattcaccttataagg--tgaattctagccactagactacttgac 6530182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 9031752 - 9031846
Alignment:
Q  217 aagtttgagtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    |||||| |||||| |||  ||||| ||||||||||| ||||| |||| ||||||  |||| |||  ||| ||||| ||||||| |||||||||||    
T  9031752 aagttttagtccccgtgaacatagctcagttggcagggacatgcattgttatatgcagggcttgaagtttgaacctcagacaccccacttattca 9031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 349
Target Start/End: Complemental strand, 12311491 - 12311380
Alignment:
Q  237 atagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagca 335  Q
    |||| ||||||||||| |||| ||||||||||||| |||  || ||| |||||| | || |||   |||||||||||||||||| |  |||||||||||     
T  12311491 atagctcagttggcagggacaatacattattatatgtagttgtcgggattcgaatcccaaacatctcacttattcaccttaaaatg--tgaattctagcc 12311394  T
Q  336 actgaactacttga 349  Q
    ||| ||||||||||    
T  12311393 actaaactacttga 12311380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 320
Target Start/End: Original strand, 19135924 - 19136018
Alignment:
Q  226 tccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||| ||| |||||| || |||||||| ||||| |||||||||||  | ||||||  ||||||||| || ||||  |||||||||||||| ||||    
T  19135924 tccccgtgagcatagctcggttggcagggacatgcattattatatgcatgggttgacgttcgaacctcatacaccacacttattcacctttaaag 19136018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 24470483 - 24470397
Alignment:
Q  235 gcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| |||||||||||||||| | |||||||||||| |||||  || ||||||||| | || |  |||||||||||| |||||||    
T  24470483 gcatagctcagttggcagagacaatgcattattatatacaggggccggagttcgaaccccggaaatcccacttattcactttaaaag 24470397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 317
Target Start/End: Original strand, 31122148 - 31122178
Alignment:
Q  287 gaaccacagacactccacttattcaccttaa 317  Q
    |||||||||||||||||||||||||||||||    
T  31122148 gaaccacagacactccacttattcaccttaa 31122178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 339
Target Start/End: Original strand, 34524869 - 34524983
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||||||||||| ||||| |||| ||||||  |||||  ||||||||| || |  |||| ||||||||||||||  |||  | |    
T  34524869 gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgagccccgaacaccccacttattcacctggaaaaaggt 34524968  T
Q  325 gaattctagcaactg 339  Q
    |||||||||| ||||    
T  34524969 gaattctagccactg 34524983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 4408393 - 4408434
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccac 304  Q
    ||||||||  ||||| ||||||||||||||||||||||||||    
T  4408393 tattatatgcaggggctggggttcgaaccacagacactccac 4408434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 4844154 - 4844227
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||||| ||||| |||| ||||||  |||||| ||||||  |||| |||||||  ||||||||||||||    
T  4844154 tcagttggcagggacatgcattgttatatgcaggggtcggggtttaaacctcagacacctcacttattcacctt 4844227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 9422844 - 9422917
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||||| ||||| |||| ||||||| | | | ||||||||||||  | ||||| |||||||||||||||    
T  9422844 tcagttggcagggacatgcattgttatatacaagagctggggttcgaacaccggacaccccacttattcacctt 9422917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 319
Target Start/End: Original strand, 12341416 - 12341509
Alignment:
Q  226 tccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| ||| |||||| ||||||| |||  |||||||||||||||| ||||||  || | |||||||  | |||| ||| |||||||||||||||    
T  12341416 tccccgtgagcatagttcagttgacaggaacatacattattatatgtaggggccggaggtcgaaccctaaacaccccagttattcaccttaaaa 12341509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 24256927 - 24257000
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||| |||||||| |||||||||||  |||||  | |||||||||| | || || |||||||||||||||    
T  24256927 tcagttggtagagacatgcattattatatgcaggggccgaggttcgaaccccggataccccacttattcacctt 24257000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 26528596 - 26528657
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||| ||||||| |||| | ||||| |||||||||||||||| ||||    
T  26528596 cattattatatgcaggggtcggggttcaaacctcggacaccccacttattcaccttataagg 26528657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 14949104 - 14949056
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaac 290  Q
    |||||||||||| ||||||||||||||||  || ||| |||||||||||    
T  14949104 tcagttggcagaaacatacattattatatgcagaggtcggggttcgaac 14949056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 30885605 - 30885565
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactcca 303  Q
    ||||||||| ||||| ||||||||||||| |||||||||||    
T  30885605 tattatatacaggggctggggttcgaaccccagacactcca 30885565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 35190767 - 35190864
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| |||||||| |||   || |||||||||||  |||||| || ||||||||| |  |||| |||||||||||||||| ||||  |||||||||||    
T  35190767 gcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttattcaccttataagg--tgaattctagc 35190864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 37997930 - 37997822
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaa 341  Q
    ||||||||||| ||||| |||| ||||||  ||||  ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||| ||    
T  37997930 tcagttggcagggacattcattgttatatgcagggtctggggttcgaaccccagacaccccacttattcaccttaaaaaggatgaattctagccactaaa 37997831  T
Q  342 ctacttgac 350  Q
    || ||||||    
T  37997830 ctgcttgac 37997822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 23935116 - 23935033
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||||||||||| ||||||||||||| |||||| | |||  |||||||||| ||||||| |||||||||| ||||||||    
T  23935116 catagttcagttggcagggacatacattattgtatataagagttaaggttcgaacctcagacaccccacttattctccttaaaa 23935033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 225 - 315
Target Start/End: Original strand, 29785144 - 29785234
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||| ||| |||||| ||||||||||| |||||||| | | |||| |||||| ||||||||||||| | ||||| |||||||||||||||    
T  29785144 gtccccgtgagcatagctcagttggcagggacatacactgtaatatgtaggggctggggttcgaaccccggacaccccacttattcacctt 29785234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 16293947 - 16294051
Alignment:
Q  227 ccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatga 326  Q
    ||||||| |||||| |||||||||||||||||| |||||||||| ||||||| || |||| || | |||||||   |||||||||||||||||  | |||    
T  16293947 ccctgtgagcatagctcagttggcagagacata-attattatatctaggggtcggtgttcaaatctcagacaccgtacttattcaccttaaaaatggtga 16294045  T
Q  327 attcta 332  Q
    ||||||    
T  16294046 attcta 16294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 49039546 - 49039437
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||||||||||| ||||| |||| ||||||  ||||  ||||||||||||| | ||||| ||||||||||||||| |||  | |    
T  49039546 gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcagggactggggttcgaaccccggacaccccacttattcaccttgaaaaaggt 49039447  T
Q  325 gaattctagc 334  Q
    ||||||||||    
T  49039446 gaattctagc 49039437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 2942195 - 2942242
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaa 289  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  2942195 tcagttggcagagacatacattgttatatttaggggttggggttcgaa 2942242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 45011406 - 45011465
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||||| |||||||  |||||| ||||||||||| ||||||||||||||||||||    
T  45011406 cattattatatgtaggggtccgggttcaaaccacagacaatccacttattcaccttaaaa 45011465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 30295555 - 30295614
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  30295555 aggggttggggttcgaaccccagacaccccacttattcaccttagaagg--tgaattctagc 30295614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 273 - 334
Target Start/End: Original strand, 30324457 - 30324516
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  30324457 aggggttggggttcgaaccccagacaccccacttattcaccttagaagg--tgaattctagc 30324516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 32690119 - 32690197
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||||| |||||||||||| ||||||||||||| | ||||||||| |  |||| ||||||||||| ||| ||||    
T  32690119 tcagttggcagtgacatacattatgatatataggggttagagttcgaaccccgaacaccccacttattcatcttgaaag 32690197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 15640546 - 15640449
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||  |||||||||||||||| | |||||||||||  || | | |||||||||||| ||||||| |||||||||||| |||||||    
T  15640546 agtccccgtgagcatatctcagttggcagagacaatgcattattatatgcagtgttcggggttcgaacctcagacaccccacttattcactttaaaag 15640449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 334
Target Start/End: Original strand, 20610737 - 20610842
Alignment:
Q  229 ctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaat 328  Q
    ||||| |||||| ||||||||||| ||||| |||| ||||||  |||||  |||||||||||  | ||||  |||||||||||||||||||  | |||||    
T  20610737 ctgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgaactccggacatcccacttattcaccttaaaaaaggtgaat 20610836  T
Q  329 tctagc 334  Q
    ||||||    
T  20610837 tctagc 20610842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 28520834 - 28520737
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  28520834 agtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 28520737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 48968313 - 48968216
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  48968313 agtccccgtgagcatagttcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 48968216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 54854280 - 54854155
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||||||||||| ||||| ||| |||||||  ||||| ||||||||||||| | ||||   |||||||||||||| |||    |    
T  54854280 gtccccgtgagcatagctcagttggcagggacatgcataattatatgcaggggctggggttcgaaccccggacatcacacttattcaccttgaaaaaagt 54854181  T
Q  325 gaattctagcaactgaactacttgac 350  Q
    |||||||||| |||  ||||||||||    
T  54854180 gaattctagccactagactacttgac 54854155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 6331005 - 6330941
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||||| ||||||||||||||| || | | ||||| |||||||||||||||| ||||    
T  6331005 atacattattatatgtaggggttggggttcaaatcccggacaccccacttattcaccttataagg 6330941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 332
Target Start/End: Complemental strand, 21023441 - 21023346
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||| |||||||||||| |||| |||| ||||||   |||||||||||||||||| | ||||| ||||||||||||||| |||  | |||||||||    
T  21023441 catagctcagttggcagaaacatgcattgttatatcc-ggggttggggttcgaacccccgacaccccacttattcaccttgaaaaaggtgaattcta 21023346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 40150466 - 40150562
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| |||||||||||  ||| | |||||||||||| |||||| |||||||||||| | |||||  ||||||||||| |||||||    
T  40150466 gtccccgtgagcatagttcagttggcaggaacaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttattcactttaaaag 40150562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 49319397 - 49319477
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||  ||||| |||||||||||  |||||| ||||||| |||| | ||||| |||||||||||||||    
T  49319397 gcatagctcagttggcatggacatgcattattatatgcaggggtcggggttccaaccccggacaccccacttattcacctt 49319477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 53815689 - 53815777
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  ||||| ||||||||||||| | ||||| ||||||||||||    
T  53815689 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcac 53815777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 6637791 - 6637715
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagca 335  Q
    ||||||||||||||  ||||||||||||||||||| |  |||| ||||||||||| |||| ||||  ||||||||||||    
T  6637791 atacattattatatgcaggggttggggttcgaaccccgaacaccccacttattcatcttataagg--tgaattctagca 6637715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 9285725 - 9285637
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||||||||  ||||  ||||||||||||| ||||||| ||||||||| |||||| ||||  ||||||||||| |||  ||||||||||    
T  9285725 cattattatatgcagggtctggggttcgaaccccagacaccccacttattaaccttataagg--tgaattctagccactagactacttgac 9285637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 315
Target Start/End: Original strand, 9924885 - 9924940
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||||||  |||||| |||||||||||| | |||||||||||||||||||||    
T  9924885 cattattatatgcaggggtcggggttcgaaccccggacactccacttattcacctt 9924940  T

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Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 12820507 - 12820399
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    ||||| ||| |||||| |||||||||||||||| | |||| ||||||  |||||| |||||| |||||   ||||| |||||||||||||||| ||||      
T  12820507 gtccccgtgagcatagctcagttggcagagacaatgcattgttatatgcaggggtcggggttagaaccctggacaccccacttattcaccttataagg-- 12820410  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  12820409 tgaattctagc 12820399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 38433340 - 38433416
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaact 338  Q
    ||||||||||| |||| || || ||||||||| ||||||| |||||||||||||||| ||||  ||||||||| |||||    
T  38433340 cattattatatgtaggagtcggagttcgaaccccagacaccccacttattcaccttataagg--tgaattctaacaact 38433416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 52560793 - 52560865
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  ||||||||||||||| ||||| ||||||||||||||| ||||  |||||||||||    
T  52560793 cattattatatgcaggggccggggttcgaaccacatacacttcacttattcaccttataagg--tgaattctagc 52560865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 56546515 - 56546456
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||||||  |||||  |||||||||||||||||||| |||||||||||| ||||||    
T  56546515 cattattatatgcaggggccggggttcgaaccacagacaccccacttattcactttaaaa 56546456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 8690217 - 8690303
Alignment:
Q  235 gcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||||||||||  |||| | |||||||||||  |||||| |||||||||||| | ||||| |||||||||||| |||||||    
T  8690217 gcatagctcagttggcaaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaag 8690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 54264932 - 54265046
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| |||| ||||||| |||| |||| |||||| |||||||  |||||| |||| |  ||||  |||||||||||||| |||  |||||||||||||    
T  54264932 gcatagctcagctggcagaaacatgcattgttatatgtaggggtcagggttcaaacctcgaacacctcacttattcaccttgaaaaagatgaattctagc 54265031  T
Q  335 aactgaactacttga 349  Q
     ||||  ||||||||    
T  54265032 cactgggctacttga 54265046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 3442872 - 3442933
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||| | ||||  |||||||||||| ||||||| |||||||||||||||| ||||    
T  3442872 cattattatatgtcggggccggggttcgaaccccagacaccccacttattcaccttataagg 3442933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 14149797 - 14149882
Alignment:
Q  236 catagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  14149797 catagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 14149882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 21752809 - 21752886
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||||  |||||  ||||||||||  ||||| ||||||| ||||| || |||||||||||||| |||||||||    
T  21752809 tcagttggcaaggacatgtattattatatgcaggggctggggtttgaaccccaaacactccacttatttaccttaaaa 21752886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 33076553 - 33076618
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| |||||||||||  |||||| |||||||||||| | ||||| | |||||||||||||||||    
T  33076553 gacatgcattattatatgcaggggtcggggttcgaaccccggacaccctacttattcaccttaaaa 33076618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 41492599 - 41492491
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||||||||||| ||||| |||||||||||  |||||  ||||||||||||   ||||| ||||||||| ||||| |||  | |    
T  41492599 gtccccgtgagcatagctcagttggcagggacatgcattattatatgcaggggccggggttcgaacc-tggacaccccacttatttaccttgaaaaaggt 41492501  T
Q  325 gaattctagc 334  Q
    ||||||||||    
T  41492500 gaattctagc 41492491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 9692955 - 9693051
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| || | | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  9692955 gtccccgtgagcatagctcagttggcagggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 9693051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 20753216 - 20753119
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| |||||||| ||  | || ||||||||||| ||||||  |||||||||||| | |||||  ||||||||||||||| ||||  |||||||||||    
T  20753216 gcatagctcagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcaccttataagg--tgaattctagc 20753119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 27921900 - 27921984
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| |||||||| || ||||| |||||||||||  |||||  |||||||||||| ||||||   |||||||||| |||||||    
T  27921900 gcatagctcagttggtagggacatgcattattatatgcaggggccggggttcgaaccccagacatctcacttattcatcttaaaa 27921984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 34684594 - 34684658
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||||||  || ||||||  |||||||| ||||||| |||||||||||||||| ||||    
T  34684594 atacattattatatgcagaggttggaattcgaacctcagacaccccacttattcaccttataagg 34684658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 52031236 - 52031296
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| |||||  |||||| |||||||||||| ||||||| |||||||||||| |||||||    
T  52031236 cattagtatatgcaggggtcggggttcgaaccccagacaccccacttattcactttaaaag 52031296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 333
Target Start/End: Complemental strand, 6481668 - 6481577
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    ||||||||||| ||||| ||| |||||||  || ||  | |||||||||| ||||| | |||||||||||||||||||  | ||||||||||    
T  6481668 tcagttggcagggacatgcatgattatatgcagaggccgaggttcgaacctcagacgccccacttattcaccttaaaaatggtgaattctag 6481577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 26203853 - 26203781
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||| ||||||||||||| ||||| | ||||  ||||||||||| |||| ||||  |||||||||||    
T  26203853 cattattatataaaggggttggggtttgaacccctgacatcccacttattcatcttataagg--tgaattctagc 26203781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 291
Target Start/End: Original strand, 27296851 - 27296882
Alignment:
Q  260 cattattatatataggggttggggttcgaacc 291  Q
    ||||||||||||||||||||||||||||||||    
T  27296851 cattattatatataggggttggggttcgaacc 27296882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 36008268 - 36008376
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    ||||| ||| |||||| ||||||||||| |||| | |||| ||||||  |||||  |||||||||||| |  |||| |||||||||||||||| ||||      
T  36008268 gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataagg-- 36008365  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  36008366 tgaattctagc 36008376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 37032245 - 37032173
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| ||| |||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  37032245 cattattatatgcaggggtcgggattcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 37032173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 42411556 - 42411461
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||| ||||||||||| |||| | ||| |||||||  |||||| |||||||||||| | ||||| ||||||||| || ||||||    
T  42411556 gtccccgtgagcatagctcagttggcagggacaatgcataattatatgcaggggtcggggttcgaaccccggacaccccacttatttactttaaaa 42411461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 47018012 - 47017940
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  |||||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  47018012 cattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 47017940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 53698046 - 53697970
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaact 338  Q
    |||||||||||  |||||  |||||||||||| | ||||| ||||||||| |||||| ||||  |||||||||||||||    
T  53698046 cattattatatgcaggggccggggttcgaaccccggacaccccacttatttaccttataagg--tgaattctagcaact 53697970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 56314790 - 56314862
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  ||||||  ||||||||||||| |||||  ||||||||||| ||||||||  |||||||||||    
T  56314790 cattattatatgcaggggtcagggttcgaaccacggacaccacacttattcacattaaaagg--tgaattctagc 56314862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 319
Target Start/End: Original strand, 295292 - 295358
Alignment:
Q  253 agacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| ||||||||||||||| | ||||||||||||||  | ||| || | |||||||||||||||    
T  295292 agacatgcattattatatatagagattggggttcgaaccctaaacattcaatttattcaccttaaaa 295358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 9062180 - 9062266
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaa-ccacagacac-tccacttattcaccttaaaa 319  Q
    |||||| | ||||||||| ||||| |||||||||||  | ||||||||||||||| || | |||||  |||||||||||||||||||    
T  9062180 gcatagtttagttggcagggacatgcattattatatgcaagggttggggttcgaacccccggacacacccacttattcaccttaaaa 9062266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 291
Target Start/End: Original strand, 15507564 - 15507606
Alignment:
Q  249 gcagagacatacattattatatataggggttggggttcgaacc 291  Q
    ||||||| ||||||||||||||  |||||||||||||||||||    
T  15507564 gcagagatatacattattatatgcaggggttggggttcgaacc 15507606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 18741001 - 18740927
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagaca-ctccacttattcacctt 315  Q
    |||||||||||||| || |||||||||||  |||||| || ||||||||| || ||| | |||||||||||||||    
T  18741001 tcagttggcagagatatgcattattatatgcaggggtcggagttcgaaccccaaacacccccacttattcacctt 18740927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 36257688 - 36257782
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||| ||||||||||| ||||  || |||| |||  |||||  |||||||||||| | ||||| |||||||||||| ||||||    
T  36257688 gtccccgtgagcatagctcagttggcagggacaagcagtattgtatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaa 36257782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 41137945 - 41137907
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattca 311  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  41137945 aggggttggggttcgaaccacagacaccccacttcttca 41137907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 548953 - 548892
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||  |||||||||| | ||||||| |||||||||||||||| ||||    
T  548953 cattattatatgcaggggccggggttcgaaactcagacaccccacttattcaccttataagg 548892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 32885717 - 32885778
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||| || ||||||||| | ||||| |||||||||||||||| ||||    
T  32885717 cattattatatgcaggggtcggagttcgaacctcggacaccccacttattcaccttataagg 32885778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 36954149 - 36954226
Alignment:
Q  244 agttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||| |||| | |||||||||||  |||||| |||||||||||| | ||||| ||| |||||||| |||||||    
T  36954149 agttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccatttattcactttaaaag 36954226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 321
Target Start/End: Original strand, 48512192 - 48512289
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||| ||| |||||| ||||||||||| |||| | |||| ||||||  ||||| | ||||||| ||| | ||||| |||||||||||||||| ||||    
T  48512192 gtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggctagggttcgtaccccggacaccccacttattcaccttataagg 48512289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 289
Target Start/End: Original strand, 15638712 - 15638744
Alignment:
Q  257 atacattattatatataggggttggggttcgaa 289  Q
    ||||||||||||||||||||| |||||||||||    
T  15638712 atacattattatatataggggctggggttcgaa 15638744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 29269381 - 29269325
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||||||||| |||||| |||| |||||||| | ||||| ||||||||||| ||||    
T  29269381 cattattatatgtaggggctgggattcgaaccccggacaccccacttattcatctta 29269325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 31852648 - 31852608
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactcca 303  Q
    |||||||| |||||||||||||||||||| | |||||||||    
T  31852648 tattatatgtaggggttggggttcgaaccccggacactcca 31852608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 32048626 - 32048566
Alignment:
Q  259 acattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||||||| ||||||| |||||| ||||| ||||||  ||| |||||||| ||||||    
T  32048626 acattattatatgtaggggtcggggtttgaaccccagacagcccatttattcactttaaaa 32048566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 34773749 - 34773672
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactg 339  Q
    |||||||||||  ||||| || |||||||||| | ||||| |||||||||||| ||| ||||  ||||||||||| ||||    
T  34773749 cattattatatgcaggggctgaggttcgaaccccggacaccccacttattcactttataagg--tgaattctagccactg 34773672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 35747535 - 35747456
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaaaag--ggatgaattctagcaactgaactacttgac 350  Q
    |||||| | |||||||||  | ||||| |||||||||||||||| |||  | |||||||||||| |||| ||||||||||    
T  35747535 aggggtcgaggttcgaactccggacaccccacttattcaccttataaggtgaatgaattctagccactggactacttgac 35747456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 43142532 - 43142564
Alignment:
Q  260 cattattatatataggggttggggttcgaacca 292  Q
    ||||||||||| |||||||||||||||||||||    
T  43142532 cattattatatgtaggggttggggttcgaacca 43142564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 52556746 - 52556682
Alignment:
Q  255 acatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||| ||||||  |||||| |||||||||||  |  ||||||||||||||| ||||||||    
T  52556746 acatacattgttatatgcaggggtcggggttcgaacatcgaacactccacttattctccttaaaa 52556682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 4e-21; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 33533214 - 33533322
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaa 341  Q
    ||||||||||||||||| |||| |||||| ||| ||||||||||||||||| |||||  |||||||||||||||||||    ||||||||| |||||  |    
T  33533214 tcagttggcagagacatgcattgttatatgtagtggttggggttcgaaccatagacatcccacttattcaccttaaaaaaagtgaattctaacaactaga 33533313  T
Q  342 ctacttgac 350  Q
    |||||||||    
T  33533314 ctacttgac 33533322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 34407174 - 34407082
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||||||| ||||||| ||||||||||| ||| |||  |||||||||||||    
T  34407174 tcagttggcagggacatgcattattatatgcaggggttggggttcgaaccccagacaccccacttattcatcttgaaaatgatgaattctagc 34407082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 16985031 - 16985108
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||| ||||| |  ||||||||||||||||| ||||||    
T  16985031 tcagttggcagagacattcattattatatgtaggggtttgggtttgaacctcgaacactccacttattcactttaaaa 16985108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 10959126 - 10959222
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | ||||||||||||||||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  10959126 gtccccgtgagcatagctcagttggcagggacaatgcattattatatataggggccggggttcgaaccccggacaccccacttattcactttaaaag 10959222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 349
Target Start/End: Complemental strand, 49299356 - 49299217
Alignment:
Q  209 agaaagtcaagtttgagtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttat 308  Q
    ||||| |||| ||||||| || ||| |||||| ||||||| ||| ||||| ||| ||||||| ||  || ||||||||||||| ||||||||||||||||    
T  49299356 agaaattcaattttgagttcccgtgagcatagttcagttgacagggacatgcataattatatgtaaaggctggggttcgaacc-cagacactccacttat 49299258  T
Q  309 tcaccttaaaagggatgaattctagcaactgaactacttga 349  Q
    ||||||| | |  | ||||||||||| |||  |||||||||    
T  49299257 tcaccttgagaaagctgaattctagccactagactacttga 49299217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 7020778 - 7020857
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacct 314  Q
    |||||||||||||||||||||||| |||||||||||| | |||| |||||||||||| | | ||| | ||||||||||||    
T  7020778 gcatagatcagttggcagagacatgcattattatatacatgggtcggggttcgaaccccggtcacccaacttattcacct 7020857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 225 - 315
Target Start/End: Complemental strand, 31108861 - 31108771
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||| |||||  ||||||||||| ||||| ||| |||||||  ||||| |||||||||||||  |||||| |||||||||||||||    
T  31108861 gtccctgtgagcataactcagttggcagggacatgcataattatatgcaggggctggggttcgaacccgagacaccccacttattcacctt 31108771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 24160612 - 24160520
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||||||||| || | ||||||  |||||| |||||||||||| | |||||||||||||||||| || |||  | |||||||||||    
T  24160612 tcagttggcagagacatgcactgttatatgcaggggtcggggttcgaaccccggacactccacttattcactttcaaaaagttgaattctagc 24160520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 13540030 - 13539958
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| |||||||||||||||||||| | ||||| ||||||||| |||||| ||||  |||||||||||    
T  13540030 cattattatatgtaggggttggggttcgaaccccggacaccccacttatttaccttataagg--tgaattctagc 13539958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 332
Target Start/End: Original strand, 36844323 - 36844418
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    |||| ||||||||||| |||||||||||||||||||||||||  | |||| |||    ||||||||| |||||||| ||||||  |||||||||||    
T  36844323 atagctcagttggcagggacatacattattatatataggggtcagagttcaaactctggacactccatttattcactttaaaaaagatgaattcta 36844418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 43566862 - 43566790
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| |||||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  43566862 cattattatatgcaggggtcggggttcgaacctcagacaccccacttattcaccttataagg--tgaattctagc 43566790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 334
Target Start/End: Original strand, 43774190 - 43774286
Alignment:
Q  237 atagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||| ||||||||||| |||| | |||| ||||||  |||||| |||||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  43774190 atagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataagg--tgaattctagc 43774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 334
Target Start/End: Original strand, 47191362 - 47191474
Alignment:
Q  221 ttgagtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||| ||| |||||| ||||||||||| |||| | |||||||||||  ||||| ||| ||||||||| |  |||| |||||||||||||||| ||    
T  47191362 ttgagtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttattcaccttataa 47191461  T
Q  320 gggatgaattctagc 334  Q
      |||||||||||||    
T  47191462 --gatgaattctagc 47191474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 50724396 - 50724455
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||    
T  50724396 cattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaa 50724455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 50788452 - 50788393
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||    
T  50788452 cattattatatgcaggggttggggttcgaacctcggacaccccacttattcaccttaaaa 50788393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 350
Target Start/End: Original strand, 24130553 - 24130678
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||  ||||||||||| |||||||||| ||||||  |||||  |||||| ||||| | ||||| ||||||||||||||| |||  | |    
T  24130553 gtccccgtgagcataactcagttggcagggacatacattgttatatgcaggggacggggtttgaaccccggacaccccacttattcaccttgaaaaagtt 24130652  T
Q  325 gaattctagcaactgaactacttgac 350  Q
    |||| ||||| |||  ||||||||||    
T  24130653 gaatactagccactagactacttgac 24130678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 38507652 - 38507734
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| ||||||||||| ||||| ||||||||||  ||||||| ||||||| ||||  | |||| |||||||||||||||||||    
T  38507652 gcatagctcagttggcagggacatgcattattata--taggggtcggggttcaaaccctaaacaccccacttattcaccttaaaa 38507734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 9624976 - 9625072
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  9624976 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 9625072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 27183783 - 27183687
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  27183783 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 27183687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 37279653 - 37279717
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||||||  || |||||||||||||||  ||||||| |||||||||||||||| ||||    
T  37279653 atacattattatatgcagaggttggggttcgaactccagacaccccacttattcaccttataagg 37279717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 332
Target Start/End: Original strand, 23025891 - 23025998
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| | |||||||||| |||| |||||||| || ||| | ||| |||| ||||| ||||||| |||||||||||| ||||||  | |    
T  23025891 gtccccgtgagcatagctaagttggcagaaacatgcattattaaatgtagcgattgaggtttgaaccccagacaccccacttattcactttaaaaaaggt 23025990  T
Q  325 gaattcta 332  Q
    ||||||||    
T  23025991 gaattcta 23025998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 33206786 - 33206858
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  ||||| ||||||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  33206786 cattattatatgcaggggctggggttcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 33206858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 49146113 - 49146196
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactac 345  Q
    |||||||||||  |||||| |||||||||||| | ||||| |||||||||||| ||| ||||  ||||||||||| ||| ||||||    
T  49146113 cattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataagg--tgaattctagccactaaactac 49146196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 3784062 - 3784143
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccac 304  Q
    |||| ||||| |||||| ||||||||||| |||| | |||||||||||| |||||| |||||||||||| | ||||| ||||    
T  3784062 agtctctgtgagcatagctcagttggcagggacaatgcattattatatacaggggtcggggttcgaaccccggacaccccac 3784143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 18399704 - 18399630
Alignment:
Q  274 ggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||||||||||||||| | ||||| | ||| |||||||||||||||  ||||||||||| |||  ||||||||||    
T  18399704 ggggttggggttcgaaccccggacacgctactcattcaccttaaaagg--tgaattctagccactagactacttgac 18399630  T

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Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 28951877 - 28951950
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||||||| |||| |||||||||||  ||||||  ||||||||||| |  |||| |||||||||||||||    
T  28951877 tcagttggcagatacatgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttattcacctt 28951950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 31902277 - 31902212
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| |||| |||||| ||||||| |||||||||||  | ||||| |||||||||||||||||||    
T  31902277 gacatgcatttttatatgtaggggtcggggttcgaactccggacaccccacttattcaccttaaaa 31902212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 36331818 - 36331733
Alignment:
Q  235 gcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| ||| ||||||| |||| | |||||||||||  |||||| |||||||||||| | ||||| |||||||||||| ||||||    
T  36331818 gcatagctcaattggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaa 36331733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 38555130 - 38555034
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagac-atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||| ||||||||||||||| || |||||||||||  ||||| | ||||||||||| || ||||  ||||||||||| |||||||    
T  38555130 agtccccgtgagcatagttcagttggcagagacaatgcattattatatgcagggg-tcgggttcgaacctcaaacacctcacttattcactttaaaag 38555034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 49019212 - 49019273
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||| ||||||| |||||||||| | |||||||  ||||||||||||||| ||||    
T  49019212 cattattatatgtaggggtcggggttcgaatctcagacaccgcacttattcaccttataagg 49019273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 14868678 - 14868774
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| |  |||| |||||||||||| |||||||    
T  14868678 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcactttaaaag 14868774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 31419624 - 31419672
Alignment:
Q  272 taggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||||||||||||| || |||| ||||||||||||||||||||    
T  31419624 taggggctggggttcgaaccccaaacaccccacttattcaccttaaaag 31419672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 42824087 - 42823991
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||  |||||||||||  ||| |||||||||||||| | ||||||||||||||| | | ||||| | |||||||||| |||||||    
T  42824087 gtccccgtgagcataactcagttggcaggcacaatacattattatatacaagggttggggttcgaatctcggacaccctacttattcactttaaaag 42823991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 50676930 - 50676878
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||| |||||||||||||||||||| |  |||| |||||||||||||||    
T  50676930 tattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctt 50676878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 6284888 - 6284951
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccact 305  Q
    ||||||||||| ||||| |||||||| | | |||||| |||||||||||| ||||||| |||||    
T  6284888 tcagttggcagggacatgcattattacacacaggggtcggggttcgaaccccagacaccccact 6284951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 13616140 - 13616068
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| ||||||| || ||||||||| | ||||| ||||||||||| |||| ||||  |||||||||||    
T  13616140 cattattatatgtaggggtcggagttcgaacctcggacaccccacttattcatcttataagg--tgaattctagc 13616068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 13638280 - 13638237
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccactt 306  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||    
T  13638280 tattatatgtaggggctggggttcgaaccccagacactccactt 13638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 14417897 - 14417969
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  ||||| ||| ||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  14417897 cattattatatgcaggggctggagttcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 14417969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 19149435 - 19149502
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttatt 309  Q
    ||||||| ||||||||| ||||||||||| ||||| |  ||||| ||||| ||||||||||| |||||    
T  19149435 tcagttgacagagacatgcattattatatgtagggttcagggtttgaaccccagacactccatttatt 19149502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 23237366 - 23237421
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaac 290  Q
    |||||| ||||||||||| ||||| ||||||||||| ||||||| || ||||||||    
T  23237366 gcatagctcagttggcagggacatgcattattatatgtaggggtcggagttcgaac 23237421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 32508860 - 32508788
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| |||||||||||| |  |||| |||||||||||||||| ||||  |||||||||||    
T  32508860 cattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataagg--tgaattctagc 32508788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 40160739 - 40160838
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| ||| ||||||| ||||| |||| ||||||   |||| ||||||| ||||| | ||||| ||||||||||||||| |||  | |||||||||||    
T  40160739 gcatagctcaattggcagggacatgcattgttatatgccggggctggggtttgaaccccggacaccccacttattcacctttaaaaaggtgaattctagc 40160838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 48173315 - 48173387
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| || ||||||| ||||||||| | |||||  ||||||||||||||| ||||  |||||||||||    
T  48173315 cattattatatgtatgggttggagttcgaaccccggacacctcacttattcaccttataagg--tgaattctagc 48173387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 334
Target Start/End: Original strand, 32080060 - 32080158
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||| |||||| |||| | |||  |||||||||| || |||| |||||||||||| |  |||| ||||||||||||||| |||  | |||||||||||    
T  32080060 catagctcagtttgcaggggcatgaattattatatgtatgggtcggggttcgaaccccgaacaccccacttattcaccttgaaaaaggtgaattctagc 32080158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 34136760 - 34136822
Alignment:
Q  228 cctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaac 290  Q
    |||||| |||||| |||||||| |||   || ||||||||||| |||||||||||||||||||    
T  34136760 cctgtgagcatagctcagttggtagaacaatgcattattatatgtaggggttggggttcgaac 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 350
Target Start/End: Complemental strand, 54983758 - 54983683
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||| |||||||||||| | ||||| ||| |||||||||||| ||||  ||||||||||| ||| |||||| ||||    
T  54983758 aggggtcggggttcgaaccccggacaccccatttattcaccttataagg--tgaattctagccactaaactacctgac 54983683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 3461808 - 3461759
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaacc 291  Q
    ||||||| ||| ||||| |||| |||||| ||||||||||||||||||||    
T  3461808 tcagttgacagggacatgcattgttatatgtaggggttggggttcgaacc 3461759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 7938329 - 7938288
Alignment:
Q  265 ttatatataggggttggggttcgaaccacagacactccactt 306  Q
    |||||| ||||||| |||||||||||| ||||||||||||||    
T  7938329 ttatatgtaggggtcggggttcgaaccccagacactccactt 7938288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 16006552 - 16006511
Alignment:
Q  280 ggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||| ||||||| |||||||||||||||| ||||    
T  16006552 ggggttcgaaccccagacaccccacttattcaccttataagg 16006511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 334
Target Start/End: Original strand, 16999942 - 17000031
Alignment:
Q  245 gttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||| ||||| ||||||||||| ||||||  || ||||||||  ||||||| |||| |||||| ||| ||| || |||||| ||||    
T  16999942 gttggcagggacatgcattattatatgtaggggccggagttcgaactccagacaccccacatattcatcttgaaaagggtgaattgtagc 17000031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 35280697 - 35280742
Alignment:
Q  267 atatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||| |||||||||||||||||||  |||||| ||||||||||||    
T  35280697 atatacaggggttggggttcgaaccctagacaccccacttattcac 35280742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 35483298 - 35483359
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||| |||||||||| | | ||||| |||||||||||||||| ||||    
T  35483298 cattattatatgcaggggtcggggttcgaatcccggacaccccacttattcaccttataagg 35483359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 40956788 - 40956663
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||  |||||||| || |||| ||||||||||||| | |||  || ||||||||| | |||||  || ||||||| |||||||  | |    
T  40956788 gtccccgtgagcataactcagttggtagggacaaacattattatatacaagggccggagttcgaaccccggacacctcatttattcagcttaaaaaaggt 40956689  T
Q  325 gaattctagcaactgaactacttgac 350  Q
    |||||||| | ||| |||||||||||    
T  40956688 gaattctaaccactaaactacttgac 40956663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 42920672 - 42920639
Alignment:
Q  273 aggggttggggttcgaaccacagacactccactt 306  Q
    ||||||||||||||||||| ||||||||||||||    
T  42920672 aggggttggggttcgaaccccagacactccactt 42920639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 311
Target Start/End: Complemental strand, 45583522 - 45583477
Alignment:
Q  266 tatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    |||||||||||||| ||||||||| | ||||||| |||||||||||    
T  45583522 tatatataggggttagggttcgaatcccagacaccccacttattca 45583477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 50144652 - 50144611
Alignment:
Q  280 ggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||| | |||||||||||||||||||||| ||||    
T  50144652 ggggttcgaaccccggacactccacttattcaccttataagg 50144611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 24559422 - 24559478
Alignment:
Q  264 attatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||||  |||||| |||||||||||| | ||||| |||||||||||| |||||||    
T  24559422 attatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaag 24559478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 27066639 - 27066695
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  ||||||  ||||||||||| | ||||| ||||||||||||||||    
T  27066639 cattattatatgcaggggtcagggttcgaaccccggacaccccacttattcacctta 27066695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 28226253 - 28226193
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||||||||  ||||||||||||||||| | |  |||| |||||||||||| |||||||    
T  28226253 cattattatatgcaggggttggggttcgaatcccgaacaccccacttattcactttaaaag 28226193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 319
Target Start/End: Original strand, 31680736 - 31680820
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| |||||| | || ||||| |||| |||||  ||| |||||||||| ||||  | ||||| |||||||||||||||||||    
T  31680736 gcatagctcagtttgtagggacatgcattgttatacgtagaggttggggtttgaacttcggacaccccacttattcaccttaaaa 31680820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 32429761 - 32429825
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccactt 306  Q
    ||||||||||| ||||||| || |||||| ||| ||| || ||||||||| ||||||| ||||||    
T  32429761 tcagttggcagggacatacgttgttatatgtagaggtcggagttcgaaccccagacaccccactt 32429825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 43897634 - 43897686
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||| ||||| |||  ||||||||| ||||||| |||||||||||||||    
T  43897634 tattatatgtagggattgatgttcgaacctcagacaccccacttattcacctt 43897686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 54295235 - 54295287
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||| ||||| ||||||  |||||||||||| | ||||||||||||||||||    
T  54295235 cattaatatatgtaggggccggggttcgaacctcggacactccacttattcac 54295287  T

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Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 350
Target Start/End: Original strand, 43635582 - 43635707
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||  |||||||||||| |||| |||| ||||||  || ||| |||||||||||| | ||||| |||||||||||||||| || || |    
T  43635582 gtccccgtgagcataactcagttggcagaaacatgcattgttatatgcagcggtcggggttcgaaccccggacaccccacttattcaccttacaaagggt 43635681  T
Q  325 gaattctagcaactgaactacttgac 350  Q
    |||||||||| ||| |||||||||||    
T  43635682 gaattctagccactaaactacttgac 43635707  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 16814691 - 16814778
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||||||  ||||| ||||||||||   |||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||    
T  16814691 gtccctgtgaacatagctcagttggcaagaacatgcattattatatgtaggggtcggggttcgaaccccagacactccacttattcac 16814778  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 45268027 - 45267933
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||| |||||||||||||||||| ||||||||||  ||| || || |||||||||| |||||| |||||||||| ||||||||    
T  45268027 gtccccgtgagcatagctcagttggcagagacatatattattatatgcaggagtcggagttcgaaccatagacaccccacttattctccttaaaa 45267933  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 33236343 - 33236274
Alignment:
Q  250 cagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||||||||| ||||||  |||||||||||||||||| |||||||| | |||||||||| ||||||    
T  33236343 cagagacatacattgttatatgcaggggttggggttcgaacaacagacaccctacttattcactttaaaa 33236274  T

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Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 924358 - 924302
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||||||||| |||||||||||||||||||| ||||||| |||||||||| |||||    
T  924358 cattattatatgtaggggttggggttcgaaccccagacaccccacttattcgcctta 924302  T

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Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 10474603 - 10474519
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| |||||||| ||||||||||||| ||||||  |||||| ||||||||| || | |||||  ||||||||||||||||||    
T  10474603 gcatagttcagttggtagagacatacattgttatatgcaggggtcggggttcgacccccggacacctcacttattcaccttaaaa 10474519  T

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Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 1513484 - 1513571
Alignment:
Q  228 cctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||| |||||||||||| ||||| |||| |||||| ||||||||| |||||||||  |  |||| |||||||||||||||    
T  1513484 cctgtgagcataaatcagttggcagggacatgcattgttatatgtaggggttgaggttcgaacaccgaacaccccacttattcacctt 1513571  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 30152770 - 30152842
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||||||||||| |||||||||||| |  |||| |||||||||||||||| ||  |||||||||||||    
T  30152770 cattattatatataggggtcggggttcgaaccccgaacaccccacttattcaccttataa--gatgaattctagc 30152842  T

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Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 31475932 - 31475846
Alignment:
Q  235 gcatagatcagttggcagagacata-cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||||||||||| |||||  |||||||||||  ||||| ||||||||||||| | ||||| |||||||||||| |||||||    
T  31475932 gcatagctcagttggcagggacattgcattattatatgcaggggctggggttcgaacccctgacaccccacttattcactttaaaag 31475846  T

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Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 43902601 - 43902530
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||| |||||||||| |||||||||||  |||| |||||||||||||||| ||||  |||||||||||    
T  43902601 attattatatgtaggggttggagttcgaaccacgaacaccccacttattcaccttataagg--tgaattctagc 43902530  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 7465470 - 7465542
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccactta 307  Q
    |||||| ||||||||||||||||| |||||||||||  |||||  |||||||||||| | ||||| |||||||    
T  7465470 gcatagctcagttggcagagacatgcattattatatgcaggggccggggttcgaaccccggacaccccactta 7465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 14818467 - 14818371
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||| ||||||| |||| || |||| |||||||||||| |||||||    
T  14818467 gtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttattcactttaaaag 14818371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 15265465 - 15265369
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||| ||||||| |||| || |||| |||||||||||| |||||||    
T  15265465 gtccccgtgagcatagctcagttggcagggacagtgcattattatatgcaggggtcggggttcaaaccccaaacaccccacttattcactttaaaag 15265369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 334
Target Start/End: Complemental strand, 21285456 - 21285347
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggg 322  Q
    |||||| ||| |||||| ||||||||||| |||| | |||| ||||||  |||||  |||||||||||| | ||||| |||||||||||||||| ||||     
T  21285456 agtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagg- 21285358  T
Q  323 atgaattctagc 334  Q
     |||||||||||    
T  21285357 -tgaattctagc 21285347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 41139080 - 41139176
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||| |||||||||| | | |||||| ||||||||||| |||||||    
T  41139080 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaatcccggacacttcacttattcactttaaaag 41139176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 41417377 - 41417281
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| |||||||||||  ||| | ||| |||||||  |||||| |||||||||||| ||||||| |||||||||||| |||||||    
T  41417377 gtccccgtgagcatagctcagttggcaggaacagtgcatcattatatgcaggggtcggggttcgaaccccagacaccccacttattcactttaaaag 41417281  T

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Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 349
Target Start/End: Complemental strand, 24579357 - 24579263
Alignment:
Q  255 acatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttga 349  Q
    |||| |||||||||||  ||||| || | |||||||| ||||||| ||||||||||||||| |||  | ||||||||| | ||| ||||||||||    
T  24579357 acatgcattattatatgcaggggatgagattcgaaccccagacaccccacttattcaccttgaaaaaggtgaattctatccactaaactacttga 24579263  T

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Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 47403656 - 47403582
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||| ||||||||| |||||||||| |||||||||   |||||||||||||||||||||| ||||  |||||||||||    
T  47403656 atactttattatatgtaggggttggagttcgaacctg-gacactccacttattcaccttataagg--tgaattctagc 47403582  T

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Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 7392407 - 7392282
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||| |||||||  |||| |||| ||||||  || |||||||||| ||||| |  |||| ||||||||||||||| |||   ||    
T  7392407 gtccccgtgagcatagctcaattggcaggaacatgcattgttatatgcagaggttggggtttgaaccccgaacaccccacttattcaccttgaaaaatat 7392308  T
Q  325 gaattctagcaactgaactacttgac 350  Q
    ||||| |||| ||| |||||||||||    
T  7392307 gaattatagccactaaactacttgac 7392282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 23799311 - 23799388
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||||||||||| |||| ||||||  |||||| ||| |||||||| | ||||| |||||||||| | ||||||    
T  23799311 tcagttggcagagacatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttattctctttaaaa 23799388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 334
Target Start/End: Original strand, 48174973 - 48175069
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||| ||||||||||  ||||| |||||||||||| |||||  || ||||||||| | ||||| |||||||||| |||| ||| || |||||||||||    
T  48174973 atagctcagttggcaaggacatgcattattatatacaggggccggtgttcgaaccccggacaccccacttattccccttgaaaagg-tgaattctagc 48175069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 320
Target Start/End: Original strand, 8742654 - 8742738
Alignment:
Q  237 atagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||| ||||||| ||| |||| |||||||||||||  ||||||||| ||||||| | |||| |||||| |||||||| |||||||    
T  8742654 atagctcagttgacagggacaatacattattatatgcaggggttggagttcgaatcccagatactccatttattcactttaaaag 8742738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 19126766 - 19126826
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||||||||| ||||| || |||||||||| | ||||| |||||||||||| |||||||    
T  19126766 cattattatatacaggggctgaggttcgaaccccggacaccccacttattcactttaaaag 19126826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 32309229 - 32309125
Alignment:
Q  245 gttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaacta 344  Q
    |||||||| ||||| |||| ||||||  |||||| || ||||||| | ||||||| ||| |||||||||||||||    ||||||||||| |||  ||||    
T  32309229 gttggcagggacatgcattgttatatgcaggggtcggagttcgaatctcagacaccccagttattcaccttaaaaaatgtgaattctagccactagacta 32309130  T
Q  345 cttga 349  Q
    |||||    
T  32309129 cttga 32309125  T

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Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 35195847 - 35195927
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||| ||||| |||||||||||  |||||  |||||||||||| |  |||| ||| |||||||||||    
T  35195847 gcatagctcagttggcagggacatgcattattatatgcaggggccggggttcgaaccccgaacaccccatttattcacctt 35195927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 350
Target Start/End: Complemental strand, 42976672 - 42976576
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||||||| |||||  ||||| | | ||||||||| || |||||||||||||||||| ||||||  | ||||||||| | |||  ||||||||||    
T  42976672 gacatacattgttataggtagggatcgaggttcgaactacggacactccacttattcactttaaaaaaggtgaattctacctactagactacttgac 42976576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 2366386 - 2366458
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| |||||||||||   |||||| |||||||||||||||| ||||  |||||||||||    
T  2366386 cattattatatgcaggggtcggggttcgaactctagacaccccacttattcaccttataagg--tgaattctagc 2366458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 29658374 - 29658266
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    ||||| ||| |||||| ||| ||||||| |||| | |||| ||||||  |||||  |||||||||||| | ||||| |||||||||||||||| ||||      
T  29658374 gtccccgtgagcatagctcaattggcagcgacaatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagg-- 29658277  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  29658276 tgaattctagc 29658266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 30644198 - 30644270
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  || ||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  30644198 cattattatatgcaggggccggtgttcgaaccccagacaccccacttattcaccttataagg--tgaattctagc 30644270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 47641080 - 47641123
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccactt 306  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||    
T  47641080 tattatatgtaggggctggggttcgaaccccagacactccactt 47641123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 316
Target Start/End: Original strand, 11808061 - 11808123
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||| |||| ||||||  |||||| |||||||||||| | ||||| ||||||||||||||||    
T  11808061 gacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcacctta 11808123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 315
Target Start/End: Original strand, 14707334 - 14707376
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||||||||||||| | ||||| |||||||||||||||    
T  14707334 aggggttggggttcgaaccccggacaccccacttattcacctt 14707376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 48053144 - 48053230
Alignment:
Q  226 tccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||| ||| |||||| | |||||| || |||||||||| |||||| ||||||| ||| |||||| ||  ||||| ||||||||||||    
T  48053144 tccccgtgagcatagcttagttggtagggacatacattcttatatgtaggggtcgggattcgaatcatggacaccccacttattcac 48053230  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 9351045 - 9351122
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||| ||| |||||  ||||||||||  |||||| || ||||||||| |  | ||||||||||||||||||||||    
T  9351045 tcagttgacagggacatgtattattatatgcaggggtcggagttcgaaccccgaaaactccacttattcaccttaaaa 9351122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 22966024 - 22965963
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||  | |||||||||| ||||||| |||||||||||||||| ||||    
T  22966024 cattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataagg 22965963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 23685620 - 23685567
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacc 313  Q
    |||||||||||  |||||  |||||||||||| ||||||| |||||||||||||    
T  23685620 cattattatatgcaggggccggggttcgaaccccagacaccccacttattcacc 23685567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 26560015 - 26560068
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaac 290  Q
    |||| ||||||| || |||||||||||||||||| ||| |||||||||| ||||    
T  26560015 atagctcagttgacaaagacatacattattatatgtagaggttggggtttgaac 26560068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 38025370 - 38025431
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  ||| ||||||||||||||| | |||| |||||||||||| |||| ||||    
T  38025370 cattattatatgcaggagttggggttcgaacctcggacattccacttattcatcttataagg 38025431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 43712397 - 43712289
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt-aaaagggatgaattctagcaactga 340  Q
    |||||||| || ||||| |||| ||||||| |||||| |||||||||||| | || || |||||||| | |||| |||| ||| |||||||||| ||| |    
T  43712397 tcagttggtagggacatgcattgttatatacaggggtcggggttcgaacctcggataccccacttatcctccttgaaaaagga-gaattctagccactaa 43712299  T
Q  341 actacttgac 350  Q
    ||||| ||||    
T  43712298 actacctgac 43712289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 8725184 - 8725125
Alignment:
Q  280 ggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactga 340  Q
    |||||||||||| |  |||| |||||||||||||||| || || |||||||||||||||||    
T  8725184 ggggttcgaaccccgaacaccccacttattcaccttataaagg-tgaattctagcaactga 8725125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 332
Target Start/End: Complemental strand, 10020559 - 10020463
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||| ||||||| ||| ||||| |||| ||||||  ||||||||||||||||||| |  |||  ||||||||||| ||| |||  | |||||||||    
T  10020559 catagctcagttgacagggacatgcattgttatatgcaggggttggggttcgaaccccgaacaacccacttattcatcttgaaaaaggtgaattcta 10020463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 25711197 - 25711145
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||||||||| ||||||  |||||||||||| | ||||| ||||||||||||    
T  25711197 cattattatatgtaggggccggggttcgaacctcggacaccccacttattcac 25711145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 26734323 - 26734263
Alignment:
Q  274 ggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||||| ||||  |||||| ||||||||||||||| |||  | |||||||||||    
T  26734323 ggggttggggttcaaaccctagacaccccacttattcaccttgaaaaaggtgaattctagc 26734263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 32814831 - 32814907
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    |||||| |||||||| || ||||| |||||||||||  |||||| || ||||||| | | ||||| |||||||||||    
T  32814831 gcatagctcagttggtagggacatgcattattatatgcaggggtcggagttcgaatcccggacaccccacttattca 32814907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 339
Target Start/End: Original strand, 35368425 - 35368502
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactg 339  Q
    ||||||||||| |||||| || |||||||||  | ||||| ||| |||||||||||| ||||  ||||||||||| ||||    
T  35368425 cattattatatttaggggctgtggttcgaactccggacaccccatttattcaccttataagg--tgaattctagccactg 35368502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 35498409 - 35498500
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| ||||| |||||||||||  ||||||| |||||| |||  | ||||| |||||||||||| || |||  | |||||||||||    
T  35498409 tcagttggcagggacatgcattattatatgcaggggtt-gggttcaaacttcggacaccccacttattcactttgaaaaaggtgaattctagc 35498500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 36316040 - 36315984
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  |||||  |||||||||||| | ||||| ||||||||||||||||    
T  36316040 cattattatatgcaggggccggggttcgaacctcggacaccccacttattcacctta 36315984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 48525609 - 48525661
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||  ||||||||||||||||||| | |||||  ||||||||||||||    
T  48525609 tattatatgcaggggttggggttcgaaccccggacacctcacttattcacctt 48525661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 9769671 - 9769574
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    |||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||||| | ||||| ||||||||||||||| |||  | |||||||||    
T  9769671 gcatagctcagttggcagggacatgcattattatatgtagggattggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattcta 9769574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 235 - 350
Target Start/End: Original strand, 16182813 - 16182928
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| ||||||||||||||||| ||||||||||| |||||| |||||||| |||| | ||||| ||||||||||| ||| |||   |||||||||| |    
T  16182813 gcatagctcagttggcagagacatgcattattatatgtaggggctggggttcaaaccccggacaccccacttattcatcttgaaaaatatgaattctaac 16182912  T
Q  335 aactgaactacttgac 350  Q
     ||| || ||||||||    
T  16182913 cactaaattacttgac 16182928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 2643916 - 2643822
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||| | ||||||||||||||| |||||||||||  | |||| |||||| ||||| ||||||| |||||||||||||||||||    
T  2643916 gtccccgtgagcatagcttagttggcagagacatgcattattatatgcatgggtcggggtttgaaccccagacaccccacttattcaccttaaaa 2643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 9768910 - 9768801
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||||||||||| ||||| |||| ||||||  |||||| |||||||||||| | ||||| ||||||||||||||| |||  | |    
T  9768910 gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttgaaaaaggt 9768811  T
Q  325 gaattctagc 334  Q
    ||||||||||    
T  9768810 gaattctagc 9768801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 350
Target Start/End: Original strand, 195038 - 195163
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||||||| || ||| ||||||||||| ||||| ||| |||||||  ||||| || |||||| ||| ||||||| ||||||||||||||| |||  | |    
T  195038 gtccctgtgagcgtagctcagttggcagggacatgcataattatatgcaggggctgaggttcgtaccccagacaccccacttattcaccttgaaaaaggt 195137  T
Q  325 gaattctagcaactgaactacttgac 350  Q
    |||||||| | ||| | |||||||||    
T  195138 gaattctaaccactaagctacttgac 195163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 319
Target Start/End: Original strand, 5684117 - 5684209
Alignment:
Q  226 tccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||  |||||| ||||||||||||||||| |||||||||||  ||||||| || || ||||| ||||||| |||||||||||| ||||||    
T  5684117 tccctgtaagcatagctcagttggcagagacatgcattattatatgcaggggttaggatt-gaacctcagacaccccacttattcactttaaaa 5684209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 41677054 - 41677163
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| || ||| ||||||||||||||||| |||||||||||   ||||| |||||||||||  | ||||| ||||||||||||||| |||  | |    
T  41677054 gtccccgtgagcgtagctcagttggcagagacattcattattatatgcgggggtcggggttcgaactccggacaccccacttattcaccttgaaaaaggt 41677153  T
Q  325 gaattctagc 334  Q
    ||||||||||    
T  41677154 gaattctagc 41677163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 43020615 - 43020695
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| || |||||||| ||||| |||||||||||  ||||||||||||||||||| | ||||| ||||| |||||||||    
T  43020615 gcatagctcggttggcagggacatgcattattatatgcaggggttggggttcgaacctcggacaccccactcattcacctt 43020695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 749652 - 749581
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| |||||||||||||||||||| | ||||| |||||||||||||||| ||  |||||||||||||    
T  749652 cattattatatgtaggggttggggttcgaacc-ccgacaccccacttattcaccttataa--gatgaattctagc 749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 3341827 - 3341728
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| ||||||||||| ||||| |||||||||||  |||||  |||| ||||||| | ||||| ||||||||||||||| |||  | |||||||||||    
T  3341827 gcatagctcagttggcagggacatgcattattatatgcaggggccggggatcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagc 3341728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 4616903 - 4616958
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||| ||||||| | |||||||||||||||||| ||||||||||||||||    
T  4616903 attattatatgtaggggtcgcggttcgaaccacagacaccccacttattcacctta 4616958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 15774378 - 15774306
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| ||||||| |||||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  15774378 cattattatatgtaggggtcggggttcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 15774306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 29491463 - 29491557
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaa 318  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||| |||||||||||| | ||||| |||||||||||| |||||    
T  29491463 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaa 29491557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 3797888 - 3797972
Alignment:
Q  264 attatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttga 349  Q
    ||||||| |||||| |||||||||||||  |||||| ||||||||||||||||||| || |||||| |||| | | ||||||||||    
T  3797888 attatatgtaggggctggggttcgaaccctagacaccccacttattcaccttaaaaagg-tgaattatagccattaaactacttga 3797972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 226 - 311
Target Start/End: Complemental strand, 8758468 - 8758384
Alignment:
Q  226 tccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    |||||||| |||||  |||||||| |||||||||||||||||||| || | |||||||||||||||  |||||  |||||||||||    
T  8758468 tccctgtgagcataattcagttggtagagacatacattattatatgta-gagttggggttcgaaccctagacatcccacttattca 8758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 25421895 - 25421944
Alignment:
Q  272 taggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  25421895 taggggctggggttcaaaccccagacactccacttattcaccttaaaagg 25421944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 334
Target Start/End: Original strand, 4288611 - 4288691
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||||||||  ||||||  | ||||||||| |||||||  || |||||||||||||||  |||||||||||||    
T  4288611 gacatacattattatatgcaggggtcagagttcgaaccccagacacctcatttattcaccttaaaaaagatgaattctagc 4288691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 24168650 - 24168586
Alignment:
Q  255 acatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| ||||||||||| |||||   |||||||||||| ||||||| |||||||||||||||||||    
T  24168650 acatgcattattatatgtagggaccggggttcgaaccccagacaccccacttattcaccttaaaa 24168586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 26350057 - 26349986
Alignment:
Q  247 tggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||||||  ||||||||||  |||||||||| |||||||| || |||| |||||||||||||||||||    
T  26350057 tggcagagacatgtattattatatgcaggggttggg-ttcgaaccccaaacaccccacttattcaccttaaaa 26349986  T

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Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 30649122 - 30649178
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  ||| ||||||||||||||| ||||||| ||||||||||||||||    
T  30649122 cattattatatgcaggagttggggttcgaaccccagacaccccacttattcacctta 30649178  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 49251461 - 49251405
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  |||||| |||||||||||| ||||||| ||||||||||||||||    
T  49251461 cattattatatgcaggggtcggggttcgaaccccagacaccccacttattcacctta 49251405  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 333
Target Start/End: Complemental strand, 50501961 - 50501871
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    ||||||| ||||||| | |||| |||||| |||||| || ||||| |||| || ||||  |||||||||||||||||| |||||||||||||    
T  50501961 tcagttgacagagacgt-catttttatatgtaggggatgaggttcaaacctcaaacacctcacttattcaccttaaaaaggatgaattctag 50501871  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 42234606 - 42234564
Alignment:
Q  244 agttggcagagacatacattattatatataggggttggggttc 286  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  42234606 agttggcaaagacatacactattatatataggggttggggttc 42234564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 42801884 - 42801954
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccactt 306  Q
    ||||| ||||||| ||||||||| |||| ||||||  || |||||||||||||||| ||||||| ||||||    
T  42801884 catagctcagttgacagagacatgcattgttatatgcagaggttggggttcgaaccccagacaccccactt 42801954  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 315
Target Start/End: Complemental strand, 48260290 - 48260200
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||| ||| |||||| ||||||||||| ||  | ||||||||||| | ||||| || ||||||||| | ||||| |||||||||||||||    
T  48260290 gtccccgtgagcatagctcagttggcagggatgtgcattattatatgtcggggtcggagttcgaaccccggacaccccacttattcacctt 48260200  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 50575907 - 50575989
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| |||||||| || ||||| |||| ||||||  | ||| ||||||||||||| |||||||  ||||||||||||||||||    
T  50575907 atagctcagttggaagggacatgcattgttatatgcaagggctggggttcgaacctcagacacctcacttattcaccttaaaa 50575989  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 1721134 - 1721243
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||||||| |||||| |||||||| ||  |||| |||| ||||||  |||||  ||| |||||||| | |||||  ||||||||||||||||||  | |    
T  1721134 gtccctgtgagcatagctcagttggtaggaacatgcattgttatatgcaggggccgggtttcgaaccccggacacctcacttattcaccttaaaaaaggt 1721233  T
Q  325 gaattctagc 334  Q
    ||||||||||    
T  1721234 gaattctagc 1721243  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 11802086 - 11802025
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||| |||||||||||||||||||| | |||||| || |||||||| ||| ||||    
T  11802086 cattattatatgtaggggttggggttcgaaccccggacacttcatttattcacgttataagg 11802025  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 12048028 - 12047963
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||||||||||||||||||| ||||||||||     ||||||| |||||||||||||||||    
T  12048028 gacatgcattattatatataggggtcggggttcgaattctggacactctacttattcaccttaaaa 12047963  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 235 - 315
Target Start/End: Complemental strand, 28284041 - 28283963
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||||||||| ||||||  ||| || |||| ||||||| |||| |||||  ||||||||||||||||    
T  28284041 gcatagctcagttggcagagacatgcattat--tatgtaagggtcggggttcaaaccccagactttccacttattcacctt 28283963  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 320
Target Start/End: Original strand, 17350066 - 17350150
Alignment:
Q  237 atagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  17350066 atagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 17350150  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 25819178 - 25819274
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | ||||||||||| |||| |  |||||||||||| | || || |||||||||||| |||||||    
T  25819178 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgtaggagccggggttcgaaccccggataccccacttattcactttaaaag 25819274  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 27655096 - 27654996
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| ||||||||||| |||||  ||| ||||||| || |||  || | |||||| ||||||| ||||||||||||||| |||  | |||||||||||    
T  27655096 gcatagttcagttggcagggacatgaattgttatatacagaggtctggatacgaaccccagacaccccacttattcaccttgaaaaaggtgaattctagc 27654997  T
Q  335 a 335  Q
    |    
T  27654996 a 27654996  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 32635182 - 32635226
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaa 317  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||    
T  32635182 aggggttggggttcgaaccccggacaccccacttattcaccttaa 32635226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 39238709 - 39238805
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  | |||||||||| | ||||| |||||||||||| |||||||    
T  39238709 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccgaggttcgaaccccggacaccccacttattcactttaaaag 39238805  T

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Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 40678816 - 40678912
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  ||||||||| || | ||||| |||||||||||| |||||||    
T  40678816 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgatccccggacaccccacttattcactttaaaag 40678912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 11238119 - 11238020
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| |||| |||||  ||||| |||||||||||  |||||| |||||||||| | | ||||| ||||||||||| ||| |||  | |||||||||||    
T  11238119 gcatagctcagatggcatggacatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcatcttgaaaaaggtgaattctagc 11238020  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 11405485 - 11405557
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||| ||||||  |||||| |||||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  11405485 cattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 11405557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 19866539 - 19866594
Alignment:
Q  295 gacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    ||||| |||||||||||||||||||  | ||||||||||| ||| |||||||||||    
T  19866539 gacaccccacttattcaccttaaaaaaggtgaattctagccactaaactacttgac 19866594  T

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Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 32711190 - 32711138
Alignment:
Q  280 ggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  32711190 ggggttcgaaccccagacaccccacttattcaccttataagg--tgaattctagc 32711138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 7906427 - 7906333
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||| |||||||| || ||||| |||| ||||||  ||||| |||||||||||||   ||||| || |||||| |||||||||    
T  7906427 gtccccgtgagcatagttcagttggtagggacatgcattgttatatgcaggggctggggttcgaacccgggacaccccgcttattgaccttaaaa 7906333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 12981068 - 12980990
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||| ||||||||||||||||| ||||||||||| | || |||||||||  ||| |  ||| | |||||||||||||||    
T  12981068 atagttcagttggcagagacatgcattattatatgtcggagttggggtttaaactatggacgccccacttattcacctt 12980990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 339
Target Start/End: Original strand, 18003810 - 18003924
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||||||||||| ||||| |||| ||||||  |||||  ||||||||| || |  |||| ||||||||||||||  |||  | |    
T  18003810 gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgagccccgaacaccccacttattcacctggaaaaaggt 18003909  T
Q  325 gaattctagcaactg 339  Q
    |||||||||| ||||    
T  18003910 gaattctagccactg 18003924  T

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Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 24662011 - 24662094
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactac 345  Q
    |||||||||||  ||||||  || |||||||| ||||||| ||| ||||||| |||| ||||  ||||||||||| ||||||||||    
T  24662011 cattattatatgcaggggtcaggattcgaaccccagacaccccatttattcaacttataagg--tgaattctagccactgaactac 24662094  T

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Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 333
Target Start/End: Original strand, 42831976 - 42832047
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    |||||||||||  ||||| |||||||| |||| | ||||| |||||||||||||||| ||||  ||||||||||    
T  42831976 cattattatatgcaggggctggggttcaaaccccggacaccccacttattcaccttataagg--tgaattctag 42832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 332
Target Start/End: Original strand, 4146338 - 4146435
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    |||||| ||||||| |||| |||| |||| ||||||  ||||||||  |||||| || |||| | |||| |||||| ||||||||  |||||||||||    
T  4146338 gcatagctcagttgacagaaacatgcattgttatatgcaggggttgaagttcgagcctcagatattccatttattctccttaaaaaagatgaattcta 4146435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 334
Target Start/End: Original strand, 9527417 - 9527527
Alignment:
Q  223 gagtccctgtgcgcatagatcagttggcagagac-atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||| ||| |||||| ||||||||||| ||| || |||| ||||||  |||||| |||||| |||||   ||||| ||||||||||| |||| ||||    
T  9527417 gagtccccgtgagcatagctcagttggcagggacaatgcattgttatatgcaggggtcggggtttgaaccctggacaccccacttattcatcttataagg 9527516  T
Q  322 gatgaattctagc 334  Q
      |||||||||||    
T  9527517 --tgaattctagc 9527527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 9931081 - 9931174
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaa 318  Q
    ||||| ||| |||||  |||||| |||| ||||| |||||||||||  | | | ||| ||||||||| || |||| ||||||||||||||||||    
T  9931081 gtccccgtgagcataactcagttagcagggacatgcattattatatgcaagagctggagttcgaaccccaaacaccccacttattcaccttaaa 9931174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 11213518 - 11213444
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    |||||||||||||| ||| |||||| ||||||||| | ||||| ||||||||| || ||| ||||  ||||||||||    
T  11213518 atacattattatatgtagaggttggagttcgaaccccggacaccccacttatttactttataagg--tgaattctag 11213444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 320
Target Start/End: Complemental strand, 13870180 - 13870087
Alignment:
Q  228 cctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||| ||| | | ||||| |||||||||||| |||||||    
T  13870180 cctgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggtttgaatcccggacaccccacttattcactttaaaag 13870087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 17064333 - 17064272
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||| |||  |||| |||||||||||| ||||| |||||||||||| ||| ||||    
T  17064333 cattattatatgtagaagttgaggttcgaaccactgacaccccacttattcacgttataagg 17064272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 21884604 - 21884665
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||  | |||||||||| ||||||| |||||||||||||||| ||||    
T  21884604 cattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataagg 21884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 315
Target Start/End: Original strand, 27412974 - 27413039
Alignment:
Q  250 cagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||| ||||||||||||||||  ||||||||||||| ||||| | |||||  |||| |||||||||    
T  27412974 cagaaacatacattattatatgcaggggttggggtttgaaccccggacacctcactcattcacctt 27413039  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 319
Target Start/End: Complemental strand, 37693996 - 37693907
Alignment:
Q  230 tgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| |||||| ||||| || ||||||||||||| |||||| | || ||||||||||||| | |  ||| | || |||||||||||||||    
T  37693996 tgtgagcatagctcagtcggtagagacatacattgttatatgtgggagttggggttcgaatctcgaacaattcatttattcaccttaaaa 37693907  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 334
Target Start/End: Complemental strand, 47355843 - 47355759
Alignment:
Q  249 gcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||| ||||| ||| ||||||| ||||||||| | |||||||| |||||||  |||||||||||||| ||| || | |||||||||    
T  47355843 gcagggacatgcataattatatgtaggggttgagattcgaacc-cagacacctcacttattcaccttgaaaagggtaaattctagc 47355759  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 47645887 - 47645818
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccac 304  Q
    |||||| ||||||||||||||||| |||| ||||||  || ||| |||||||||| | | ||||||||||    
T  47645887 gcatagctcagttggcagagacatgcattgttatatgcagaggtcggggttcgaagcccggacactccac 47645818  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 50199560 - 50199487
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||| || ||||| |||| ||||||  |||||  |||||||||||| | ||||| |||||||||||||||    
T  50199560 tcagttggtagggacatgcattgttatatgcaggggccggggttcgaaccccggacaccccacttattcacctt 50199487  T

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Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 17056946 - 17056890
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  |||||  |||||||||||| ||||| | ||||||||||||||||    
T  17056946 cattattatatgcaggggccggggttcgaaccccagacgccccacttattcacctta 17056890  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 19424078 - 19424130
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||  |||||| |||||||||||| | ||||| |||||||||||||||    
T  19424078 tattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctt 19424130  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 19587696 - 19587668
Alignment:
Q  44 gattcaaagagaatttctttggggtggaa 72  Q
    |||||||||||||||||||||||||||||    
T  19587696 gattcaaagagaatttctttggggtggaa 19587668  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 319
Target Start/End: Complemental strand, 23758343 - 23758259
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccac-ttattcaccttaaaa 319  Q
    ||||| |||||||||||| || | |||||||||||  |||||||| |||||||||| |  |||| |||| ||||||| |||||||    
T  23758343 catagctcagttggcagaaacgtgcattattatatgcaggggttgaggttcgaaccccgaacaccccactttattcatcttaaaa 23758259  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 28916984 - 28916928
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||||||||| |||||| ||  ||||||||| || |||| ||||||||||||||||    
T  28916984 cattattatatgtaggggctgaagttcgaaccccaaacaccccacttattcacctta 28916928  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 38021245 - 38021341
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||||||||||  |||| | |||||||||||  |||||  || ||||||||| | ||||| |||||||||||| |||||||    
T  38021245 gtccccgtgagcatagctcagttggcaaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcactttaaaag 38021341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 52961184 - 52961096
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||| ||| |||||| ||||||||||  ||||| |||| ||||||  |||||  |||||||||||| | ||| | ||||||||||||    
T  52961184 agtccccgtgagcatagctcagttggcaaggacatgcattgttatatgcaggggccggggttcgaaccccggacgccccacttattcac 52961096  T

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Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 223 - 319
Target Start/End: Original strand, 33599901 - 33599997
Alignment:
Q  223 gagtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| |||||| |||| | |||||||||||| |||| |||||||||||||||| ||||||||||||| | | ||||  |||||||||||||||||||    
T  33599901 gagttcctgtgagcattgctcagttggcagaaacatgcattattatatataggagttggggttcgaatcccggacatcccacttattcaccttaaaa 33599997  T

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Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 3536039 - 3535943
Alignment:
Q  223 gagtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||| ||| |||||| ||||||||||| ||||| |||| ||||||| ||| |  |||||||||||| | ||||| |||||||||||||||||||    
T  3536039 gagtccccgtgagcatagttcagttggcagggacatgcattgttatatacaggagccggggttcgaaccccggacaccccacttattcaccttaaaa 3535943  T

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Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 17557041 - 17557117
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||||||||||| |||| |||||| ||||||| ||||||| |||| | ||||| |||||||||||||||||||    
T  17557041 tcagttggcagagacatgcattgttatatgtaggggtcggggttcaaacc-cggacaccccacttattcaccttaaaa 17557117  T

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Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 40384270 - 40384367
Alignment:
Q  250 cagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactactt 347  Q
    ||||||||| |||||||||||  || || ||||||||||||  | ||||| |||||||||||||||||||  | ||||||||||| ||| ||||||||    
T  40384270 cagagacatgcattattatatgcagcggctggggttcgaactccggacaccccacttattcaccttaaaaaaggtgaattctagccactaaactactt 40384367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 1463864 - 1463960
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  1463864 gtccctgtgagcatagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 1463960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 5598836 - 5598764
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttatt 309  Q
    |||| |||||||| |||||||||| ||||||||| ||||||||| |||| ||||| ||||||||||| |||||    
T  5598836 atagttcagttggtagagacatacgttattatatgtaggggttgaggtttgaacctcagacactccatttatt 5598764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 6806742 - 6806634
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    ||||| ||| |||||| |||||||||||||||| | |||| ||||||  |||||| ||| |||||||| | |||||||||||||||||| ||| ||||      
T  6806742 gtccccgtgagcatagctcagttggcagagacaatgcattgttatatgcaggggtcgggattcgaaccccggacactccacttattcacattataagg-- 6806645  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  6806644 tgaattctagc 6806634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 24653154 - 24653223
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||||||| |||||| |||||||||||  |||||||||||||||||   ||||||||||||||||||||    
T  24653154 tcagttggca-agacatgcattattatatgcaggggttggggttcgaatttcagacactccacttattcac 24653223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 332
Target Start/End: Complemental strand, 18102024 - 18101943
Alignment:
Q  251 agagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    ||||||||  ||||||||||  |||||  || ||||||||| ||||||| |||||||||||||||||||  |||||||||||    
T  18102024 agagacatgtattattatatgcaggggccggagttcgaaccccagacaccccacttattcaccttaaaaatgatgaattcta 18101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 28378131 - 28378075
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||||||||| |||||||||||||||||||| |  |||| ||||||||||||||||    
T  28378131 cattattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctta 28378075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 1244793 - 1244721
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  ||||||  ||||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  1244793 cattattatatgcaggggtcagggttcgaaccccagacaccccacttattcaccttataagg--tgaattctagc 1244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 14487590 - 14487662
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| |||||||||||||||||||| | || |  |||||||||||||||| ||||  |||||||||||    
T  14487590 cattattatatgtaggggttggggttcgaacctcggatatcccacttattcaccttataagg--tgaattctagc 14487662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 335
Target Start/End: Original strand, 19608642 - 19608717
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagca 335  Q
    |||||||||||  |||||| |||||||||||  | |||||| ||||||||||||||||||   |||||||||||||    
T  19608642 cattattatatgcaggggtcggggttcgaactccggacacttcacttattcaccttaaaaaaaatgaattctagca 19608717  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 31556822 - 31556921
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| ||| || |||| ||||| |||| ||||||  |||||| || ||||||||| | ||||| ||||||||||||||| ||| || |||||||||||    
T  31556822 gcatagctcacttagcagggacatgcattgttatatgcaggggtcggagttcgaaccccggacaccccacttattcaccttgaaaagggtgaattctagc 31556921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 320
Target Start/End: Complemental strand, 4674907 - 4674821
Alignment:
Q  235 gcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||||||| ||| |||| | |||||||||||  |||||| |||||||||||| | ||||| |||||||||||| |||||||    
T  4674907 gcatagctcagttgacagggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaag 4674821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 20186877 - 20186948
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||||||| ||||| |||||||||||  |||||| ||||||  |||| ||||||| |||||||||||||||    
T  20186877 tcagttggcagggacatgcattattatatgcaggggtcggggtt--aaccccagacaccccacttattcacctt 20186948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 333
Target Start/End: Original strand, 20762310 - 20762381
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    ||||||||||||||  ||||||||||||||||   ||||| |||||||||||||||| ||||  ||||||||||    
T  20762310 cattattatatataacggttggggttcgaaccctggacaccccacttattcaccttataagg--tgaattctag 20762381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 334
Target Start/End: Original strand, 27006333 - 27006443
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    |||||| ||| |||||| |||| |||||| | ||| |||| ||||||   ||||| |||||||||||  | ||||||||||||||||||||| |||  |     
T  27006333 agtccccgtgagcataggtcagatggcaggggcatgcattgttatatgctggggtcggggttcgaactccggacactccacttattcaccttgaaaaagg 27006432  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  27006433 tgaattctagc 27006443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 242 - 319
Target Start/End: Original strand, 4985770 - 4985847
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| | |||||||| |||| |||||||||||||| ||||||||||||   ||||| | ||||||||| |||||||    
T  4985770 tcagtttgtagagacatgcattgttatatataggggtcggggttcgaaccctggacaccctacttattcatcttaaaa 4985847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 20735266 - 20735181
Alignment:
Q  236 catagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||||||||||| |||| | ||||||||||| ||||||  |||||||||| | | ||||| |||||||||||| |||||||    
T  20735266 catagctcagttggcagggacaatgcattattatatgtaggggccggggttcgaatcccggacaccccacttattcactttaaaag 20735181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 33800922 - 33800983
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||  |||||||||||| ||||||| |||||||||||||||| ||||    
T  33800922 cattattatatgcaggggccggggttcgaaccccagacaccccacttattcaccttataagg 33800983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 316
Target Start/End: Complemental strand, 843434 - 843378
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||||||||| ||||||  |||||||||||| | ||||| ||||||||||||||||    
T  843434 cattattatatgtaggggacggggttcgaaccccggacaccccacttattcacctta 843378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 347
Target Start/End: Complemental strand, 11246585 - 11246473
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| ||||||||||| ||||| |||| ||||||  |||||| |||| || |||| ||||||  ||||||||||| ||| |||  | |||||||||||    
T  11246585 gcatagctcagttggcagggacatgcattgttatatgcaggggtcggggctcaaaccccagacatcccacttattcagcttgaaaaaggtgaattctagc 11246486  T
Q  335 aactgaactactt 347  Q
     |||  |||||||    
T  11246485 cactagactactt 11246473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 27278820 - 27278768
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||||||||| ||||||| |||||||||||| ||||||| ||| ||||||||    
T  27278820 cattattatatgtaggggtcggggttcgaacctcagacaccccatttattcac 27278768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 36045200 - 36045140
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||||||||  |||||| |||||||||||| | ||||| |||||||||||| |||||||    
T  36045200 cattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaag 36045140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 38129079 - 38129007
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    |||| ||||||  |||||| ||||||||||||   ||||||||||||||||||||| |||  |||||||||||    
T  38129079 cattgttatatgcaggggtcggggttcgaaccctggacactccacttattcaccttgaaaatgatgaattcta 38129007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 7234938 - 7234866
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| ||| ||| |||||||||||| |||| || ||| |||||||||||| ||||  |||||||||||    
T  7234938 cattattatatgtagaggtcggggttcgaaccccagataccccatttattcaccttataagg--tgaattctagc 7234866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 17137933 - 17137878
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||||||  |||| | |||||||||||| | |||||||||||||||||||||    
T  17137933 cattattatatgcagggatcggggttcgaacccccgacactccacttattcacctt 17137878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 24651166 - 24651217
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||||||| |||||||||||||||||||  ||||||  ||||||||||||    
T  24651166 attattatatgtaggggttggggttcgaacttcagacatcccacttattcac 24651217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 319
Target Start/End: Original strand, 37303927 - 37304022
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||| ||||||||||| |||| |  ||||||||||  |||||| ||||||||||||   ||||| |||||||||||| ||||||    
T  37303927 gtccccgtgagcatagctcagttggcagggacaatgtattattatatgcaggggtcggggttcgaaccctggacaccccacttattcactttaaaa 37304022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 38618727 - 38618671
Alignment:
Q  280 ggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaact 338  Q
    |||||||||||| | ||||| |||||||||||||||| ||||  |||||||||||||||    
T  38618727 ggggttcgaaccccggacaccccacttattcaccttataagg--tgaattctagcaact 38618671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 42455460 - 42455388
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  || ||||||||| | |||||||||||||||||||||| ||||  |||||||||||    
T  42455460 cattattatatgcaggggccggagttcgaaccccggacactccacttattcaccttataagg--tgaattctagc 42455388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 319
Target Start/End: Complemental strand, 6447565 - 6447487
Alignment:
Q  242 tcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| ||||||    
T  6447565 tcagttggcagggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcactttaaaa 6447487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 315
Target Start/End: Original strand, 20191483 - 20191525
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| |||||||||||| | |||||||||||||||||||||    
T  20191483 aggggtcggggttcgaaccccggacactccacttattcacctt 20191525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 31200832 - 31200874
Alignment:
Q  274 ggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||||||||| || ||||| |||||||||||||||    
T  31200832 ggggttggggttcgaaccccaaacacttcacttattcacctta 31200874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 32252991 - 32252933
Alignment:
Q  254 gacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    ||||| ||||||||||| ||||||| |||||||||||| ||||||| | | ||||||||    
T  32252991 gacatgcattattatatgtaggggtcggggttcgaaccccagacacccaatttattcac 32252933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 312
Target Start/End: Complemental strand, 41405184 - 41405102
Alignment:
Q  230 tgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||| |||||| ||||||| ||| ||||| |||| ||||||  | |||| |||||| ||||| ||||||||||| ||||||||    
T  41405184 tgtgagcatagttcagttgacagggacatgcattgttatatgcaagggtcggggttggaaccgcagacactccaattattcac 41405102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 318
Target Start/End: Complemental strand, 930991 - 930946
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaaa 318  Q
    ||||||||||||||||||| ||||||  ||||||||||| ||||||    
T  930991 aggggttggggttcgaacctcagacatcccacttattcatcttaaa 930946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 18872550 - 18872607
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaa 317  Q
    |||||||||||  |||||| |||||||||||| |  |||| |||||||||||||||||    
T  18872550 cattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttaa 18872607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 22647169 - 22647222
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacc 313  Q
    ||||||||||| |||||||||||| || |||| |||| |||||| |||||||||    
T  22647169 cattattatatgtaggggttggggctcaaacctcagatactccatttattcacc 22647222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 350
Target Start/End: Complemental strand, 22738646 - 22738549
Alignment:
Q  253 agacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||| ||||||||||| |||||| || |||| ||| | ||||||| | ||||||||| |||||||  | |||||||  || |||| ||||||||||    
T  22738646 agacatgcattattatatgtaggggctgtggtttgaatctcagacacccaacttattcatcttaaaaaaggtgaattccggccactggactacttgac 22738549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 25660906 - 25660991
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattc 310  Q
    ||||| ||| |||||| ||||||||||| || || |||| ||||||  |||||  ||| |||||||| ||||||| ||||||||||    
T  25660906 gtccccgtgagcatagctcagttggcagggatatgcattgttatatgcaggggccgggattcgaaccccagacaccccacttattc 25660991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 33729807 - 33729868
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||  |||||||||| | ||||||| |||||||||||||||| ||||    
T  33729807 cattattatatgcaggggccggggttcgaatctcagacaccccacttattcaccttataagg 33729868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 42553241 - 42553117
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggat 324  Q
    ||||| ||| |||||| ||||||| ||  ||||| |||| ||||||  |||| | |||||||||||| | |||||| |||||||||||||| |||    |    
T  42553241 gtccccgtgagcatagctcagttgacaacgacatgcattgttatatgcaggg-tcggggttcgaaccccggacactacacttattcaccttgaaaaatgt 42553143  T
Q  325 gaattctagcaactgaactacttgac 350  Q
    |||||||| ||||| ||||| |||||    
T  42553142 gaattctaacaactaaactatttgac 42553117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 1345420 - 1345380
Alignment:
Q  236 catagatcagttggcagagacatacattattatatataggg 276  Q
    ||||| ||||||| |||||||||||||||||||||| ||||    
T  1345420 catagctcagttgacagagacatacattattatatagaggg 1345380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 316
Target Start/End: Original strand, 9963421 - 9963501
Alignment:
Q  237 atagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||| ||||||||||| |||| | |||| ||||||  ||||||||||||||||||  | ||| | ||||||||||||||||    
T  9963421 atagctcagttggcagggacaatgcattgttatatgcaggggttggggttcgaacttcggaccccccacttattcacctta 9963501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 10106634 - 10106710
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    |||||| ||||||||||| ||||| ||||||||||| ||||||     ||||||||| | ||||| |||||||||||    
T  10106634 gcatagctcagttggcagggacatccattattatatgtaggggccaaagttcgaaccccggacaccccacttattca 10106710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 15978742 - 15978682
Alignment:
Q  261 attattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||| |||||| || |||| ||||| || |||| |||||||||||||||| ||||    
T  15978742 attattatatgtaggggatgaggtttgaaccccaaacaccccacttattcaccttataagg 15978682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 16280283 - 16280323
Alignment:
Q  265 ttatatataggggttggggttcgaaccacagacactccact 305  Q
    |||||| |||||||||||||||||||| | |||||||||||    
T  16280283 ttatatgtaggggttggggttcgaaccccggacactccact 16280323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 18175239 - 18175287
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    |||||||| ||||||| |||||||||||| ||||||  |||||||||||    
T  18175239 tattatatgtaggggtcggggttcgaaccccagacatcccacttattca 18175287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 18303132 - 18303084
Alignment:
Q  272 taggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||||||||||||||||| |  |||| |||||||||||| |||||||    
T  18303132 taggggttggggttcgaaccccgaacaccccacttattcactttaaaag 18303084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 18597444 - 18597480
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacac 299  Q
    |||||||||||||||||||||||||| || |||||||    
T  18597444 tattatatataggggttggggttcgacccccagacac 18597480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 26169078 - 26168992
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||||||||  ||||||||| ||||||||| | ||||  | |||||||||||||| ||||  | ||||||||| ||| |||||||||||    
T  26169078 cattattatatgcaggggttggagttcgaaccccggaca--cgacttattcaccttataagg--taaattctagccactaaactacttgac 26168992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 30403776 - 30403840
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||||||||| |||||  || ||| ||||| | ||||| |||||||||||||||| ||||    
T  30403776 atacattattatatacaggggccggagtttgaaccccggacaccccacttattcaccttataagg 30403840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 350
Target Start/End: Original strand, 34325276 - 34325384
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaa 341  Q
    ||||||| ||| ||||| |||||||||||  ||||  ||||||||||| | |  |||  | |||||||||||||||||   |||||||||||| ||| |     
T  34325276 tcagttgacagggacatgcattattatatgcagggactggggttcgaatctcgaacatccaacttattcaccttaaaaaaaatgaattctagccactaag 34325375  T
Q  342 ctacttgac 350  Q
    |||||||||    
T  34325376 ctacttgac 34325384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 29713173 - 29713081
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||  |||||||||| ||||||  |||| |||||||||||||| ||||||| | ||||||| |||||||||  |||||||||||||    
T  29713173 tcagttggcacggacatacattgttatatgcagggattggggttcgaaccccagacaccctacttatttaccttaaaaaagatgaattctagc 29713081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 350
Target Start/End: Complemental strand, 39334965 - 39334857
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaa 341  Q
    ||||||||||| ||||| |||||||||||| ||||| ||||||||||||  ||||||  |||||||||||| || |||  | ||||||||||| |||  |    
T  39334965 tcagttggcagggacatgcattattatatacaggggctggggttcgaactccagacatcccacttattcactttgaaaaaggtgaattctagccactaga 39334866  T
Q  342 ctacttgac 350  Q
    |||||||||    
T  39334865 ctacttgac 39334857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 1244573 - 1244672
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| ||||||||||| ||||||||||  |||||  |||||| |||||||||||| | ||||| ||||||||||||||| |||  | |||||||||||    
T  1244573 gcatagttcagttggcagggacatacattgctatatgcaggggtgggggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattctagc 1244672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 350
Target Start/End: Original strand, 34107267 - 34107393
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    |||||| ||| |||||| ||||||||||| |||||  || |||||||  |||||||| |||||||||  ||||||| ||||||||||||||| |||        
T  34107267 agtccccgtgagcatagctcagttggcagggacatgtataattatatgcaggggttgaggttcgaactccagacaccccacttattcaccttgaaaaatg 34107366  T
Q  324 tgaattctagcaactgaactacttgac 350  Q
    ||||||||||| |||  ||||||||||    
T  34107367 tgaattctagccactagactacttgac 34107393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 23683722 - 23683781
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||| ||||||| ||||    
T  23683722 atacattattatatgtaggggttggggttcgaacctcagacaccccatttattcatctta 23683781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 8234861 - 8234786
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||||| ||||||  |||||||||||| | ||||| |||||||||||||||| ||||  |||||||||||    
T  8234861 atacattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataagg--tgaattctagc 8234786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 37516024 - 37516106
Alignment:
Q  265 ttatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactactt 347  Q
    |||||| |||||||||||||||||||| |  |||||| | |||||||||||||||   |||||||||||| ||| ||||||||    
T  37516024 ttatatgtaggggttggggttcgaacctcgaacactctatttattcaccttaaaaaatatgaattctagccactaaactactt 37516106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 44187707 - 44187793
Alignment:
Q  235 gcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||||||||||| || | | |||||||||||  |||||| |||||||||||| ||||||| |||||||||||| |||||||    
T  44187707 gcatagttcagttggcagggataatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcactttaaaag 44187793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 32288387 - 32288460
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||||| |||| |||| ||||||||||| ||||| | |||||||||||| | ||||| |||||||||||||||    
T  32288387 tcagttgacagaaacatgcattattatatgtagggatcggggttcgaacctcggacaccccacttattcacctt 32288460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 10262768 - 10262824
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||  |||||| |||||||||||| ||||||| ||||||||||||||||    
T  10262768 cattattatatgcaggggtcggggttcgaaccccagacaccccacttattcacctta 10262824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 462
Target Start/End: Complemental strand, 15790250 - 15790159
Alignment:
Q  370 gtttcttccacttcttaaagacatgcaagcttagtataattgttaaaacacaaaaatttgaaaattcataagctactctaaacttgtcccact 462  Q
    ||||||||||||| ||||||||||| || ||||  |||| ||| |||||| ||||||||||||  || |||| ||||||||||||||| ||||    
T  15790250 gtttcttccactttttaaagacatggaaacttatcataactgtcaaaaca-aaaaatttgaaacatcttaagttactctaaacttgtctcact 15790159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 20942192 - 20942120
Alignment:
Q  243 cagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||||||| ||||| ||| ||||||| |||||| ||| ||||||||| |||||||  ||||||||||||||    
T  20942192 cagttggcagggacatgcataattatatgtaggggatggagttcgaaccccagacacctcacttattcacctt 20942120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 235 - 345
Target Start/End: Complemental strand, 2114526 - 2114418
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| |||||||| |||   || ||||||||||| ||||||| |||||||||||| | |||||  || |||||||||||| ||||  |||||||||||    
T  2114526 gcatagctcagttggtagaacaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttattcaccttataagg--tgaattctagc 2114429  T
Q  335 aactgaactac 345  Q
     |||| |||||    
T  2114428 cactggactac 2114418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 3179353 - 3179425
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| | |||||||||| ||||||| |||||||||||||||| ||||  |||||||||||    
T  3179353 cattattatatgcaggggtcgaggttcgaacctcagacaccccacttattcaccttataagg--tgaattctagc 3179425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 11133069 - 11133177
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaaggga 323  Q
    ||||| ||| |||||| |||||||| || |||| | |||| ||||||  |||||| |||||||||||| | ||||| |||||||||||||||| ||||      
T  11133069 gtccccgtgagcatagctcagttggtagggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataagg-- 11133166  T
Q  324 tgaattctagc 334  Q
    |||||||||||    
T  11133167 tgaattctagc 11133177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 12206502 - 12206601
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||| | |||||||||  ||||||||||||||||  |||||| |||||||||||| |  |||| || |||||||||||| |||  | |||||||||||    
T  12206502 gcatagcttagttggcaggaacatacattattatattcaggggtcggggttcgaaccccgaacaccccgcttattcaccttgaaaaaggtgaattctagc 12206601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 18386878 - 18386806
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| |||||| ||||||||||||  | ||||| |||||||||||||||| ||  |||||||||||||    
T  18386878 cattattatatgtaggggctggggttcgaactccggacaccccacttattcaccttataa--gatgaattctagc 18386806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 19905721 - 19905649
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||| |||||| |||||||||||| | ||||| | |||||||||||||| ||||  |||||||||||    
T  19905721 cattattatatacaggggtcggggttcgaaccccggacacccgacttattcaccttataagg--tgaattctagc 19905649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 350
Target Start/End: Original strand, 34620547 - 34620635
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    |||||||||||  | ||||||||||| ||||| ||||||||| | |||||||||||| ||||  ||||||||||| |||  ||||||||||    
T  34620547 cattattatatgcaagggttggggtttgaaccccagacactctatttattcaccttataagg--tgaattctagccactagactacttgac 34620635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 334
Target Start/End: Original strand, 10602019 - 10602109
Alignment:
Q  245 gttggcagagacatacattattatatataggggttggggttcgaa-ccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||||| |||| ||||||  |||||  |||||||||| |||| ||||| |||||||||||| || |||  |||||||||||||    
T  10602019 gttggcagagacatgcattgttatatgcaggggacggggttcgaacccacggacaccccacttattcactttgaaaaagatgaattctagc 10602109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 312
Target Start/End: Original strand, 36190065 - 36190135
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||||||| | ||||||||| |||||| || |||| | |||||||||| ||||||| ||||||||||||    
T  36190065 tcagttggcaaatacatacattgttatatgtaagggtcgaggttcgaacctcagacaccccacttattcac 36190135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 32527168 - 32527083
Alignment:
Q  236 catagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||||| ||||||  |||||||||||| |||||||    
T  32527168 catagctcagttggcagggacaatgcattattatatgcaggggccggggttcgaaccccagacaacccacttattcactttaaaag 32527083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 36520846 - 36520793
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacc 313  Q
    ||||||||||| ||||||| |||||||||||| | ||||| |||||||||||||    
T  36520846 cattattatatgtaggggtcggggttcgaaccccggacaccccacttattcacc 36520793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 2304283 - 2304379
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| || ||| ||||||||||| |||| |  |||||||||| ||||||| |||||||||||| | ||||| ||||||||| || |||||||    
T  2304283 gtccccgtgagcttagctcagttggcagggacaatgtattattatatgtaggggtcggggttcgaaccccggacaccccacttatttactttaaaag 2304379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 318
Target Start/End: Complemental strand, 15625347 - 15625295
Alignment:
Q  266 tatatataggggttggggttcgaaccacagacactccacttattcaccttaaa 318  Q
    ||||||||||||  |||||||||||  || |||||||||||||||||||||||    
T  15625347 tatatataggggccggggttcgaactccatacactccacttattcaccttaaa 15625295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 312
Target Start/End: Complemental strand, 24034119 - 24034067
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||||||||  |||||| |||||||||||| | ||||||||||||||||||    
T  24034119 cattattatatgcaggggtcggggttcgaacctcggacactccacttattcac 24034067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 25406721 - 25406661
Alignment:
Q  255 acatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||| |||||||||||||| |||| |||||||||||  | ||||| |||||||||||||||    
T  25406721 acatgcattattatatatatgggtcggggttcgaactccggacaccccacttattcacctt 25406661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 29034969 - 29035065
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||| ||| |||||| ||| ||||||| |||| | |||||||||||  |||||  |||||||||||| | ||||| |||||||||||| |||||||    
T  29034969 gtccccgtgagcatagctcacttggcagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 29035065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 30474261 - 30474184
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactg 339  Q
    |||||||||||  |||||  | |||||||||| ||||||| |||||||||||||||| ||||  ||||||||||| ||||    
T  30474261 cattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataagg--tgaattctagccactg 30474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 45110277 - 45110201
Alignment:
Q  243 cagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| |||| |||| ||||| |||||| ||| ||| |||||||||||| || |||| ||||| |||||||||||||    
T  45110277 cagttagcagggacaaacattgttatatgtagcggtcggggttcgaacctcaaacaccccactaattcaccttaaaa 45110201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 580849 - 580777
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||  |||||||||||| | ||||| |||||||||||||||| ||  |||||||||||||    
T  580849 cattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataa--gatgaattctagc 580777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 318
Target Start/End: Complemental strand, 6339968 - 6339917
Alignment:
Q  267 atatataggggttggggttcgaaccacagacactccacttattcaccttaaa 318  Q
    |||||||||| ||||||||||||||||| ||||  |||||| ||||||||||    
T  6339968 atatatagggattggggttcgaaccacaaacacctcacttactcaccttaaa 6339917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 298
Target Start/End: Complemental strand, 8080761 - 8080698
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagaca 298  Q
    |||||| ||| |||| || ||||| |||||||||||||||||| ||| ||||||||| ||||||    
T  8080761 gcatagctcaattggtagggacatgcattattatatataggggctggagttcgaaccccagaca 8080698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 17896829 - 17896880
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttc 286  Q
    |||||| ||||||||||| ||||| ||| |||||||| ||||||||||||||    
T  17896829 gcatagctcagttggcagggacatgcataattatatacaggggttggggttc 17896880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 20122541 - 20122469
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| ||||||  |||||||||||| | ||||| ||||||||||| |||| ||||  |||||||||||    
T  20122541 cattattatatgtaggggccggggttcgaaccccggacacgccacttattcatcttataagg--tgaattctagc 20122469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 35694863 - 35694777
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaatt 329  Q
    ||||||||||| ||||| |||| |||||| ||| ||  |||||||||||| ||||||| ||| ||||||| |||||||  ||||||||    
T  35694863 tcagttggcagggacatgcatt-ttatatgtagaggccggggttcgaaccccagacaccccatttattcatcttaaaaaagatgaatt 35694777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 36426922 - 36426850
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    ||||||||||| |||||||||||||||||||  |  |||| ||||||||||| |||| ||||  |||||||||||    
T  36426922 cattattatatgtaggggttggggttcgaactccgaacaccccacttattcatcttataagg--tgaattctagc 36426850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 44721770 - 44721698
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  |||||| |||||||||||| | ||||| ||| |||||||||||| ||||  |||||||||||    
T  44721770 cattattatatgcaggggtcggggttcgaacctcggacaccccatttattcaccttataagg--tgaattctagc 44721698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 333
Target Start/End: Original strand, 9796926 - 9796997
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    |||||||||||  |||||| |||||||||||| | ||||| ||||||||||| |||| ||||  ||||||||||    
T  9796926 cattattatatgcaggggtcggggttcgaaccccggacaccccacttattcatcttataagg--tgaattctag 9796997  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 315
Target Start/End: Original strand, 22355077 - 22355167
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    ||||| ||| |||||| ||||||||||  ||||| |||| |||| |  |||||||| | |||||||  ||||||| |||||||||||||||    
T  22355077 gtccccgtgagcatagctcagttggcaaggacatgcattgttatgtgcaggggttgagtttcgaactccagacaccccacttattcacctt 22355167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 36277803 - 36277737
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaacc 291  Q
    ||||| ||| |||||| ||||||||||| ||||| |||| |||||| |||||||||  |||||||||    
T  36277803 gtccccgtgagcatagctcagttggcagtgacatgcattgttatatgtaggggttgaagttcgaacc 36277737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 5062332 - 5062369
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacact 300  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  5062332 tattatatataggggttgtggttcgaacctcagacact 5062369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 6952315 - 6952360
Alignment:
Q  274 ggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||| ||||||||||||| ||||||| ||| |||||||||||||||    
T  6952315 ggggctggggttcgaaccccagacaccccatttattcaccttaaaa 6952360  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 11837021 - 11837074
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||| ||||||| |||||||||||| | |||||  |||||||||||||||    
T  11837021 tattatatgtaggggtcggggttcgaaccccggacacctcacttattcacctta 11837074  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 17154678 - 17154739
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    |||||||||||  |||||  |||||||||||| | ||||| |||||||||||||||| ||||    
T  17154678 cattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagg 17154739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 350
Target Start/End: Complemental strand, 29896206 - 29896137
Alignment:
Q  281 gggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttgac 350  Q
    ||||||||| ||  ||||| ||||||||||||||| |||  ||||||||||| | | |||||||||||||    
T  29896206 gggttcgaatcatggacaccccacttattcaccttgaaaaagatgaattctaaccattgaactacttgac 29896137  T

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Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 30392867 - 30392818
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||||| |||| || |||||||||||| |||||||||||||| |||||    
T  30392867 tattatatgtaggagtcggggttcgaaccccagacactccacttgttcac 30392818  T

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Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 331
Target Start/End: Original strand, 42211531 - 42211620
Alignment:
Q  242 tcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattct 331  Q
    ||||||||||| ||||| |||| |||||||||| | |||  ||||||||  | | ||| ||||||||||||||||||   ||||||||||    
T  42211531 tcagttggcagtgacatgcattgttatatatagagattgaagttcgaacgtcggtcaccccacttattcaccttaaagaagatgaattct 42211620  T

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Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 18089733 - 18089813
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| ||||||||||||||||| ||||||  |||  |||||   | ||||||||| |||||||  ||||||||||||||    
T  18089733 gcatagctcagttggcagagacatgcattatactatgcaggggccagagttcgaaccccagacacctcacttattcacctt 18089813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 20208890 - 20208945
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    |||||||||||| || ||||| |||||||||| ||||| | ||||||||||||||||    
T  20208890 cattattatatacagaggttgaggttcgaaccccagac-ccccacttattcacctta 20208945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 34018123 - 34018075
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||| ||||||||||||| | ||||| |||||||||||||||| ||||    
T  34018123 aggggctggggttcgaacctcggacaccccacttattcaccttataagg 34018075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 4349 - 4423
Alignment:
Q  257 atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctag 333  Q
    ||||||||||||||  |||||| |||||||||||| | |||||||||||||||||| ||| ||||  ||||||||||    
T  4349 atacattattatatgcaggggtcggggttcgaaccccggacactccacttattcactttataagg--tgaattctag 4423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 18034 - 17938
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||| ||| |||||| ||| |||| || |||| | |||| ||||||  ||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  18034 agtccccgtgagcatagctcaattggtagggacaatgcattgttatatgcaggggctggggttcgaaccccagacactccacttattcactttaaaa 17938  T

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Target: scaffold1990 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 923 - 995
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  ||||| ||||||||||| | ||||||| |||||||||||||||| ||||  |||||||||||    
T  923 cattattatatgcaggggctggggttcgaatcccagacaccccacttattcaccttataagg--tgaattctagc 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 47383 - 47311
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagc 334  Q
    |||||||||||  ||||| ||||||||||| | ||||||| |||||||||||||||| ||||  |||||||||||    
T  47383 cattattatatgcaggggctggggttcgaatcccagacaccccacttattcaccttataagg--tgaattctagc 47311  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 25019 - 25106
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattca 311  Q
    ||||| ||| |||||| ||||||||||| |||| | |||||||||||  ||||| ||||||||||||| | ||||| |||||||||||    
T  25019 gtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattca 25106  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 62726 - 62801
Alignment:
Q  244 agttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||| | ||||  ||||||||||||||||||||||||||||||  | ||||  ||||||||||| |||||||    
T  62726 agttggcacaaacatgtattattatatataggggttggggttcgaacatcggacaacccacttattcatcttaaaa 62801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 12556 - 12654
Alignment:
Q  223 gagtccctgtgcgcatagatcagttggcagagac-atacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    ||||||||||| |||||| ||||||||||| ||| || |||||||||||  ||||||  ||||||||||| | || || ||| |||||||| |||||||    
T  12556 gagtccctgtgagcatagctcagttggcagggacaatgcattattatatgcaggggtcagggttcgaacctcggataccccatttattcactttaaaag 12654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2098 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 715 - 619
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagg 321  Q
    ||||||||| | |||| ||||||||||| |||| | |||| |||||| |||||||||| ||||||| | || |||| |||||||||||||||| ||||    
T  715 gtccctgtgagtatagctcagttggcagggacaatgcattgttatatgtaggggttggagttcgaatcccaaacac-ccacttattcaccttataagg 619  T

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Target: scaffold0045 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 30983 - 30906
Alignment:
Q  243 cagttggcagagacatacattattatatataggggttggggttcgaaccac-agacactccacttattcaccttaaaa 319  Q
    |||||||||| ||||| || ||||||||  ||||||||| ||||||||||| ||||||  ||||||||||| ||||||    
T  30983 cagttggcagggacatgcagtattatatgcaggggttggagttcgaaccactagacacctcacttattcactttaaaa 30906  T

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Target: scaffold0343 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 316
Target Start/End: Original strand, 8589 - 8645
Alignment:
Q  260 cattattatatataggggttggggttcgaaccacagacactccacttattcacctta 316  Q
    ||||||||||| |||||||||||||||||||| |  |||| | ||||||||||||||    
T  8589 cattattatatgtaggggttggggttcgaaccccgaacaccctacttattcacctta 8645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 332
Target Start/End: Original strand, 440405 - 440500
Alignment:
Q  237 atagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattcta 332  Q
    |||| |||||||||||  |||| ||||||||||| ||||||  |||||||||  | |  |||| |||||||||||||||||||  | |||||||||    
T  440405 atagctcagttggcaggaacatgcattattatatgtaggggccggggttcgactcccgaacaccccacttattcaccttaaaaaaggtgaattcta 440500  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 21840 - 21937
Alignment:
Q  222 tgagtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    |||||||| ||| | |||| |||||||||||| ||| |  ||||||||||  ||||||||||||||||||| |  |||| |||||||||||| ||||||    
T  21840 tgagtccccgtgagtatagctcagttggcagaaacaatgtattattatatgcaggggttggggttcgaacc-cgaacaccccacttattcactttaaaa 21937  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 34134 - 34040
Alignment:
Q  225 gtccctgtgcgcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaa 319  Q
    ||||| ||| |||||| ||||||||||| ||||| |||| ||||||  |||||  ||||||||||   | |||||||||||||||| | ||||||    
T  34134 gtccccgtgagcatagctcagttggcagggacatgcattgttatatgcaggggccggggttcgaattccggacactccacttattctctttaaaa 34040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 4908 - 4812
Alignment:
Q  224 agtccctgtgcgcatagatcagttggcagagaca-tacattattatatataggggttggggttcgaaccacagacactccacttattcaccttaaaag 320  Q
    |||||| ||| |||||| ||||||||||| |||| | |||||||||||  |||||  |||||||||| | | ||||| |||||||||||| |||||||    
T  4908 agtccccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggc-ggggttcgaatcccggacaccccacttattcactttaaaag 4812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 65822 - 65773
Alignment:
Q  263 tattatatataggggttggggttcgaaccacagacactccacttattcac 312  Q
    |||||||| |||||||||||||||||| | | |||||||||||| |||||    
T  65822 tattatatgtaggggttggggttcgaatcccggacactccacttcttcac 65773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 234787 - 234713
Alignment:
Q  273 aggggttggggttcgaaccacagacactccacttattcaccttaaaagggatgaattctagcaactgaactacttga 349  Q
    |||||||| |||||||||| ||||| | ||| |||||||||||| || |  ||||||||| ||||||| ||||||||    
T  234787 aggggttgaggttcgaaccccagacgccccatttattcaccttataaag--tgaattctaacaactgagctacttga 234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 315
Target Start/End: Original strand, 67165 - 67245
Alignment:
Q  235 gcatagatcagttggcagagacatacattattatatataggggttggggttcgaaccacagacactccacttattcacctt 315  Q
    |||||| |||||||| || || || |||| |||||| |||||| |||||||||||||   ||||| ||||||| |||||||    
T  67165 gcatagctcagttgggagggatatgcattgttatatgtaggggctggggttcgaaccctggacaccccacttaatcacctt 67245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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