View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8381_low_20 (Length: 301)

Name: NF8381_low_20
Description: NF8381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8381_low_20
NF8381_low_20
[»] chr5 (43 HSPs)
chr5 (1-282)||(30072058-30072339)
chr5 (166-282)||(11274221-11274337)
chr5 (166-282)||(26329961-26330074)
chr5 (161-280)||(26070577-26070695)
chr5 (196-282)||(18452703-18452789)
chr5 (166-272)||(25594593-25594699)
chr5 (62-161)||(24517295-24517394)
chr5 (176-282)||(16622568-16622673)
chr5 (76-161)||(12340089-12340173)
chr5 (166-279)||(24841861-24841973)
chr5 (166-282)||(16634154-16634270)
chr5 (186-282)||(17027655-17027750)
chr5 (77-161)||(17382110-17382194)
chr5 (77-161)||(25594767-25594851)
chr5 (159-282)||(22229905-22230027)
chr5 (186-282)||(7742761-7742857)
chr5 (77-161)||(17027483-17027567)
chr5 (169-261)||(17381956-17382048)
chr5 (44-130)||(22229731-22229818)
chr5 (186-282)||(20694767-20694863)
chr5 (77-161)||(24841709-24841793)
chr5 (76-279)||(25075207-25075397)
chr5 (76-279)||(25133176-25133366)
chr5 (180-273)||(24410830-24410923)
chr5 (175-282)||(18178217-18178325)
chr5 (77-161)||(18222449-18222533)
chr5 (54-161)||(22967917-22968025)
chr5 (52-161)||(15205575-15205683)
chr5 (163-282)||(12339906-12340024)
chr5 (76-161)||(16622742-16622826)
chr5 (166-278)||(22755002-22755114)
chr5 (76-131)||(22754903-22754958)
chr5 (198-282)||(24130765-24130851)
chr5 (186-281)||(24517473-24517568)
chr5 (56-159)||(26070409-26070512)
chr5 (236-282)||(19763777-19763823)
chr5 (166-282)||(11997784-11997901)
chr5 (234-282)||(17695354-17695402)
chr5 (220-279)||(23157698-23157757)
chr5 (166-261)||(25367702-25367796)
chr5 (98-160)||(23157864-23157926)
chr5 (111-161)||(25680586-25680636)
chr5 (88-156)||(11274411-11274479)
[»] chr1 (48 HSPs)
chr1 (168-282)||(11769885-11769999)
chr1 (166-280)||(25727802-25727916)
chr1 (166-280)||(25736210-25736324)
chr1 (176-282)||(25494380-25494485)
chr1 (166-280)||(25730464-25730578)
chr1 (188-282)||(18300894-18300988)
chr1 (201-282)||(27461072-27461153)
chr1 (77-161)||(23223367-23223451)
chr1 (171-281)||(23519661-23519770)
chr1 (54-161)||(12423989-12424097)
chr1 (51-161)||(50047110-50047221)
chr1 (166-282)||(30781868-30781983)
chr1 (197-282)||(26102195-26102280)
chr1 (166-279)||(26657584-26657696)
chr1 (54-161)||(8247732-8247840)
chr1 (166-282)||(30675592-30675707)
chr1 (186-282)||(31313679-31313775)
chr1 (83-161)||(12810284-12810362)
chr1 (187-280)||(15416866-15416960)
chr1 (77-159)||(26657432-26657514)
chr1 (77-161)||(30675439-30675524)
chr1 (209-282)||(50047325-50047398)
chr1 (76-151)||(21451900-21451976)
chr1 (186-282)||(26854211-26854307)
chr1 (98-161)||(24903370-24903433)
chr1 (77-159)||(18301080-18301164)
chr1 (77-158)||(25730649-25730729)
chr1 (187-268)||(34381839-34381920)
chr1 (77-161)||(11770069-11770153)
chr1 (176-268)||(23521635-23521726)
chr1 (65-144)||(30781703-30781783)
chr1 (166-282)||(52271136-52271251)
chr1 (208-282)||(19257697-19257769)
chr1 (176-282)||(23223530-23223637)
chr1 (203-280)||(31319504-31319581)
chr1 (187-275)||(15298768-15298856)
chr1 (220-282)||(25373907-25373969)
chr1 (166-261)||(8247570-8247664)
chr1 (232-283)||(9328341-9328391)
chr1 (63-161)||(18795122-18795221)
chr1 (208-259)||(18795330-18795381)
chr1 (209-271)||(18391232-18391294)
chr1 (77-151)||(25266430-25266503)
chr1 (241-282)||(12423806-12423847)
chr1 (88-161)||(23519830-23519903)
chr1 (84-161)||(34381671-34381748)
chr1 (85-161)||(18391046-18391122)
chr1 (117-161)||(25494554-25494598)
[»] chr7 (50 HSPs)
chr7 (161-282)||(29544622-29544743)
chr7 (176-282)||(7494814-7494919)
chr7 (166-282)||(7142206-7142321)
chr7 (187-276)||(9761313-9761401)
chr7 (166-282)||(20470701-20470817)
chr7 (166-282)||(23125008-23125124)
chr7 (77-161)||(29544475-29544559)
chr7 (187-282)||(9801766-9801860)
chr7 (180-282)||(1074574-1074676)
chr7 (76-161)||(22067881-22067967)
chr7 (77-161)||(20470885-20470969)
chr7 (211-281)||(21545719-21545789)
chr7 (225-281)||(12358655-12358711)
chr7 (54-153)||(20446171-20446271)
chr7 (180-280)||(22532538-22532637)
chr7 (175-271)||(3268868-3268964)
chr7 (77-161)||(7142054-7142138)
chr7 (66-153)||(7815267-7815355)
chr7 (204-282)||(20446348-20446425)
chr7 (180-247)||(4977746-4977813)
chr7 (66-155)||(315129-315219)
chr7 (109-159)||(1255290-1255340)
chr7 (220-282)||(5312677-5312739)
chr7 (83-161)||(23124863-23124940)
chr7 (180-282)||(30405715-30405817)
chr7 (186-282)||(20017080-20017176)
chr7 (226-282)||(14649663-14649719)
chr7 (54-149)||(21471729-21471825)
chr7 (220-282)||(18496726-18496788)
chr7 (208-282)||(46054845-46054918)
chr7 (166-251)||(1255135-1255220)
chr7 (188-281)||(7777933-7778024)
chr7 (176-281)||(9070506-9070610)
chr7 (175-248)||(20461573-20461646)
chr7 (167-281)||(2630369-2630482)
chr7 (180-248)||(9755915-9755983)
chr7 (180-248)||(9800711-9800779)
chr7 (77-125)||(19140085-19140133)
chr7 (77-125)||(20739484-20739532)
chr7 (77-161)||(21545874-21545957)
chr7 (188-282)||(2353132-2353227)
chr7 (186-252)||(3487287-3487353)
chr7 (236-282)||(10253631-10253677)
chr7 (241-282)||(7493495-7493536)
chr7 (166-282)||(22067694-22067811)
chr7 (204-282)||(315319-315396)
chr7 (77-161)||(7494667-7494751)
chr7 (166-282)||(7815431-7815546)
chr7 (96-160)||(9385463-9385527)
chr7 (98-162)||(46054675-46054739)
[»] chr4 (46 HSPs)
chr4 (166-282)||(34864187-34864302)
chr4 (166-280)||(15192311-15192424)
chr4 (176-274)||(47024665-47024762)
chr4 (176-282)||(18898100-18898205)
chr4 (166-282)||(25315123-25315238)
chr4 (163-281)||(19601903-19602020)
chr4 (75-161)||(5906795-5906881)
chr4 (166-282)||(17026588-17026703)
chr4 (84-160)||(34864367-34864443)
chr4 (188-282)||(5676329-5676423)
chr4 (208-282)||(7024110-7024184)
chr4 (208-282)||(46647344-46647418)
chr4 (166-282)||(12111219-12111332)
chr4 (166-282)||(31859792-31859907)
chr4 (175-261)||(9288326-9288412)
chr4 (186-280)||(13064553-13064647)
chr4 (84-161)||(12111407-12111482)
chr4 (196-280)||(17339707-17339792)
chr4 (77-161)||(1676370-1676454)
chr4 (77-161)||(1682898-1682982)
chr4 (50-161)||(25315306-25315418)
chr4 (166-282)||(33519138-33519253)
chr4 (187-282)||(5906654-5906749)
chr4 (55-161)||(9783058-9783165)
chr4 (77-153)||(1696652-1696726)
chr4 (62-162)||(22119586-22119687)
chr4 (77-161)||(18897947-18898031)
chr4 (166-253)||(23353730-23353815)
chr4 (77-160)||(25050141-25050224)
chr4 (186-261)||(29437598-29437673)
chr4 (208-274)||(26159905-26159971)
chr4 (188-278)||(27302907-27302996)
chr4 (212-282)||(51884756-51884825)
chr4 (220-281)||(22119782-22119843)
chr4 (93-161)||(4953654-4953722)
chr4 (170-268)||(9782889-9782986)
chr4 (219-282)||(32021954-32022016)
chr4 (84-130)||(15192166-15192212)
chr4 (182-260)||(18444373-18444451)
chr4 (202-282)||(1695738-1695817)
chr4 (98-146)||(5125581-5125629)
chr4 (175-275)||(10576569-10576669)
chr4 (187-282)||(17187301-17187396)
chr4 (98-161)||(27302755-27302818)
chr4 (176-282)||(10320112-10320216)
chr4 (77-161)||(31859955-31860039)
[»] chr3 (41 HSPs)
chr3 (166-282)||(19219102-19219218)
chr3 (170-282)||(16970573-16970685)
chr3 (83-161)||(33914637-33914715)
chr3 (166-282)||(11474954-11475070)
chr3 (171-271)||(19263809-19263909)
chr3 (54-161)||(25919539-25919647)
chr3 (175-282)||(26418836-26418943)
chr3 (208-281)||(21829025-21829098)
chr3 (76-159)||(1475357-1475441)
chr3 (186-282)||(23908162-23908258)
chr3 (176-252)||(25919392-25919468)
chr3 (166-246)||(33914494-33914574)
chr3 (176-282)||(10341904-10342010)
chr3 (53-158)||(19219289-19219395)
chr3 (76-159)||(12573244-12573328)
chr3 (76-159)||(13549708-13549792)
chr3 (166-282)||(28422560-28422675)
chr3 (208-282)||(25188906-25188981)
chr3 (181-282)||(18474292-18474393)
chr3 (84-161)||(21017840-21017917)
chr3 (186-282)||(19543015-19543111)
chr3 (166-282)||(21017985-21018100)
chr3 (88-162)||(10341763-10341836)
chr3 (83-161)||(13911227-13911305)
chr3 (176-281)||(5632435-5632539)
chr3 (88-165)||(10303427-10303504)
chr3 (102-162)||(8402624-8402684)
chr3 (208-260)||(26387758-26387810)
chr3 (166-278)||(27415276-27415387)
chr3 (98-161)||(11521117-11521180)
chr3 (176-282)||(18065914-18066020)
chr3 (188-281)||(8402443-8402537)
chr3 (52-161)||(25883033-25883143)
chr3 (53-149)||(17637034-17637131)
chr3 (121-161)||(2729693-2729733)
chr3 (166-271)||(2729527-2729625)
chr3 (204-282)||(13911403-13911480)
chr3 (166-282)||(25883211-25883326)
chr3 (76-161)||(12409413-12409498)
chr3 (55-159)||(25188691-25188796)
chr3 (204-282)||(1475171-1475248)
[»] scaffold0171 (3 HSPs)
scaffold0171 (166-282)||(21505-21621)
scaffold0171 (77-161)||(6152-6236)
scaffold0171 (187-282)||(6324-6418)
[»] chr8 (44 HSPs)
chr8 (166-282)||(16052168-16052284)
chr8 (65-159)||(12956432-12956527)
chr8 (166-281)||(32239395-32239510)
chr8 (186-282)||(24696709-24696805)
chr8 (166-281)||(28859131-28859246)
chr8 (83-161)||(14977182-14977260)
chr8 (54-155)||(16052358-16052460)
chr8 (77-159)||(24120187-24120269)
chr8 (175-282)||(13583411-13583518)
chr8 (163-282)||(22894423-22894540)
chr8 (188-282)||(28291992-28292086)
chr8 (176-282)||(28901241-28901346)
chr8 (161-279)||(29291873-29291990)
chr8 (161-282)||(28902192-28902312)
chr8 (54-161)||(13082012-13082120)
chr8 (54-161)||(16054226-16054334)
chr8 (77-161)||(28901415-28901499)
chr8 (180-282)||(6888084-6888186)
chr8 (163-282)||(11437524-11437643)
chr8 (77-161)||(32239243-32239327)
chr8 (204-282)||(11310147-11310224)
chr8 (54-151)||(29047401-29047499)
chr8 (180-280)||(14424706-14424806)
chr8 (186-281)||(30543888-30543984)
chr8 (186-281)||(5153885-5153980)
chr8 (176-282)||(14977003-14977108)
chr8 (188-282)||(12956610-12956704)
chr8 (81-154)||(6358658-6358731)
chr8 (175-270)||(28074629-28074724)
chr8 (220-274)||(30850999-30851053)
chr8 (163-248)||(24584650-24584734)
chr8 (166-282)||(28260180-28260296)
chr8 (79-158)||(26882365-26882445)
chr8 (98-161)||(5570216-5570279)
chr8 (180-282)||(27097693-27097793)
chr8 (220-282)||(13081826-13081887)
chr8 (166-282)||(16054402-16054517)
chr8 (186-281)||(12774737-12774830)
chr8 (188-281)||(24120353-24120446)
chr8 (81-161)||(13530180-13530260)
chr8 (81-161)||(13619719-13619799)
chr8 (166-230)||(29047262-29047326)
chr8 (232-282)||(31436646-31436693)
chr8 (186-278)||(35135316-35135408)
[»] chr2 (39 HSPs)
chr2 (166-282)||(27417154-27417270)
chr2 (166-282)||(21505030-21505146)
chr2 (161-282)||(18236194-18236314)
chr2 (54-158)||(21505217-21505322)
chr2 (166-282)||(24188077-24188192)
chr2 (53-161)||(25473968-25474077)
chr2 (166-282)||(22511053-22511169)
chr2 (54-161)||(35707735-35707843)
chr2 (166-282)||(21848965-21849080)
chr2 (208-282)||(24047531-24047606)
chr2 (161-282)||(17152256-17152377)
chr2 (77-162)||(32619598-32619683)
chr2 (186-282)||(1732678-1732774)
chr2 (166-282)||(30998879-30998994)
chr2 (208-279)||(15454433-15454504)
chr2 (98-161)||(16593827-16593890)
chr2 (166-267)||(19541145-19541245)
chr2 (100-161)||(30998750-30998811)
chr2 (186-282)||(14921930-14922026)
chr2 (77-161)||(28278498-28278581)
chr2 (176-271)||(15829239-15829333)
chr2 (84-162)||(1733063-1733141)
chr2 (166-282)||(35707911-35708026)
chr2 (166-279)||(17415058-17415169)
chr2 (208-281)||(31262147-31262219)
chr2 (169-282)||(16593642-16593754)
chr2 (53-162)||(18236376-18236486)
chr2 (99-161)||(21844704-21844766)
chr2 (186-240)||(27917916-27917970)
chr2 (209-278)||(17862560-17862629)
chr2 (176-282)||(32619747-32619848)
chr2 (66-161)||(19949629-19949725)
chr2 (54-161)||(32276588-32276696)
chr2 (166-281)||(25474145-25474259)
chr2 (234-281)||(31274131-31274178)
chr2 (77-124)||(31914045-31914092)
chr2 (232-282)||(18818875-18818925)
chr2 (99-161)||(21843077-21843139)
chr2 (123-160)||(15829136-15829173)
[»] scaffold0188 (2 HSPs)
scaffold0188 (166-282)||(26846-26962)
scaffold0188 (81-158)||(27032-27109)
[»] chr6 (27 HSPs)
chr6 (197-281)||(30355455-30355539)
chr6 (180-282)||(26499738-26499840)
chr6 (180-282)||(33638396-33638498)
chr6 (54-161)||(15574857-15574964)
chr6 (166-282)||(16439566-16439681)
chr6 (77-144)||(15576254-15576321)
chr6 (166-282)||(24507334-24507449)
chr6 (56-155)||(30355260-30355360)
chr6 (98-161)||(13759526-13759589)
chr6 (167-282)||(17860340-17860454)
chr6 (81-162)||(14924491-14924572)
chr6 (186-260)||(12972298-12972372)
chr6 (208-282)||(14924309-14924383)
chr6 (166-282)||(15575032-15575147)
chr6 (232-282)||(33638259-33638309)
chr6 (166-282)||(9396498-9396612)
chr6 (77-156)||(16527852-16527925)
chr6 (186-281)||(16387147-16387242)
chr6 (84-159)||(16387325-16387400)
chr6 (220-282)||(26512670-26512732)
chr6 (220-282)||(26517786-26517848)
chr6 (219-282)||(32930336-32930399)
chr6 (98-161)||(32930547-32930610)
chr6 (232-282)||(24618056-24618106)
chr6 (55-159)||(15998444-15998549)
chr6 (77-149)||(12972471-12972543)
chr6 (81-161)||(20495868-20495948)
[»] scaffold0065 (1 HSPs)
scaffold0065 (166-282)||(12352-12467)
[»] scaffold0011 (1 HSPs)
scaffold0011 (180-282)||(228078-228179)
[»] scaffold0650 (1 HSPs)
scaffold0650 (177-282)||(5661-5765)
[»] scaffold0386 (4 HSPs)
scaffold0386 (166-282)||(8600-8716)
scaffold0386 (166-230)||(13014-13078)
scaffold0386 (54-158)||(8787-8892)
scaffold0386 (84-154)||(13153-13223)
[»] scaffold0337 (1 HSPs)
scaffold0337 (166-282)||(1916-2031)
[»] scaffold0282 (1 HSPs)
scaffold0282 (204-282)||(22505-22582)
[»] scaffold0002 (2 HSPs)
scaffold0002 (53-130)||(446936-447014)
scaffold0002 (166-282)||(447084-447199)
[»] scaffold0190 (1 HSPs)
scaffold0190 (186-282)||(11589-11685)


Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 30072058 - 30072339
Alignment:
Q  1 gtcattttacatcttcctctaaatcgataactacaaacctccaccttgcatattgatgacggaacatcatgtgttattttggctatgttttaagtacttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30072058 gtcattttacatcttcctctaaatcgataactacaaacctccaccttgcatattgatgacggaacatcatgtgttattttggctatgttttaagtacttt 30072157  T
Q  101 tctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaagtattttgagtgctttgtagtgggaaatcatgttaatc 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||    
T  30072158 tctttggatttgaagacaaataagatgagaattagaggagttgtcaatggtttgaggaacaggtgttttgagtgctttgtagtgggaaatcatattaatc 30072257  T
Q  201 gaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  30072258 gacaaatcaagacatcacatgaaggatcaaagatatgaagattgaagattaatggttcttaaaaggtttttaaagacaatac 30072339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 11274337 - 11274221
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||  ||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||    
T  11274337 ttttgagtgttttgtagtaagaaatcatgtatatcgacaaatcaagacatcacatgaaggatcaaggatatgaagattgaagaccaatggttcttagaag 11274238  T
Q  266 gtttttgaagacaatac 282  Q
    || ||||||||||||||    
T  11274237 gtctttgaagacaatac 11274221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 26330074 - 26329961
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| |||||||||  ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||| |||    
T  26330074 ttttgagtgttttgtagtg--aaatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-tcaatggtccttagaag 26329978  T
Q  266 gtttttgaagacaatac 282  Q
    |||||| ||||||||||    
T  26329977 gttttttaagacaatac 26329961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 161 - 280
Target Start/End: Original strand, 26070577 - 26070695
Alignment:
Q  161 aagtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    |||| |||||||| |||| ||||| |||||||||| ||| |  ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| |    
T  26070577 aagtgttttgagt-ctttttagtgagaaatcatgtaaattggcaaaacaagacatcacatgaaggatcaaggatatgaagattgaagatctatggttcgt 26070675  T
Q  261 aaaaggtttttgaagacaat 280  Q
    | ||||||||||||||||||    
T  26070676 ataaggtttttgaagacaat 26070695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 282
Target Start/End: Complemental strand, 18452789 - 18452703
Alignment:
Q  196 taatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||    
T  18452789 taatcgacaaatcaagacatcacatgagggatcaaagatatgaaaattgaagatcaatggttcttataaggttttttaaaacaatac 18452703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 166 - 272
Target Start/End: Complemental strand, 25594699 - 25594593
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||||||| | ||| |||    
T  25594699 ttttgagtgttttatagtgagaaatcatgtaaatcgaaaaattaagacatcacatgaacgatcaaggatatgaagattgaatatcaatggatattagaag 25594600  T
Q  266 gtttttg 272  Q
    |||||||    
T  25594599 gtttttg 25594593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 24517295 - 24517394
Alignment:
Q  62 gaacatcatgtgttattttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||| | ||| |||||| | |||||||| ||| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24517295 gaacattaagtgatattttagttatgtttttagttctttgctttgcatttgaagacaaataagatgagaattagaggagttgtcaatggtttgaggaaca 24517394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 16622673 - 16622568
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    |||| |||| |||||||||| ||| || |||||||||||||||||||||||| || ||||||||||||||||| || ||||||||| |||| ||||||||    
T  16622673 tttgcagtgagaaatcatgtaaattgacaaatcaagacatcacatgaaggattaaggatatgaagattgaagaccagtggttcttagaagg-ttttgaag 16622575  T
Q  276 acaatac 282  Q
    |||||||    
T  16622574 acaatac 16622568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 12340173 - 12340089
Alignment:
Q  76 attttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  12340173 attttggctatgtttttagta-ttttctttgcatttgaagacaaataaggtgagagttagaggagttgtcaatggtttgaggaaca 12340089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 24841861 - 24841973
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||| |||| ||||||||| |||||||||| ||| |||||||||||||| ||| ||||||||||| ||||||  |||||||| ||||||||||||| |||    
T  24841861 tttttagtgttttgtagtgagaaatcatgtaaattgaaaaatcaagacaacacgtgaaggatcaaggatatgtggattgaag-tcaatggttcttagaag 24841959  T
Q  266 gtttttgaagacaa 279  Q
    | ||||||||||||    
T  24841960 gattttgaagacaa 24841973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 16634154 - 16634270
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||| || |||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||  |||||||| ||||||| |||||||||||| |||    
T  16634154 ttttgaatgttttgcagtgagaaatcatataaatcgacaaatcaagacatcacgtgaaggaacaataatatgaagtttgaagaccaatggttcttagaag 16634253  T
Q  266 gtttttgaagacaatac 282  Q
    ||||||||||| |||||    
T  16634254 gtttttgaagaaaatac 16634270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 17027655 - 17027750
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| |||||||||||||||||||||| || | ||||||||||||||||||||||| | |||| |||||| |||||| |||||||||||||    
T  17027655 gaaatcatgtaaatcgaaaaatcaagacatcacgtgcaagatcaaagatatgaagattgaag-ttaatgcttcttagaaggttcttgaagacaatac 17027750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 17382194 - 17382110
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| ||||||| || ||||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  17382194 tttttgctatgtgtttagtacttttttttgcatttgaagacaaataagatgagagttagaggagttgtcaatggtttgaggaaca 17382110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 25594851 - 25594767
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||| |||| || ||||||||||||||||||    
T  25594851 ttttggctatgtttttagtacttttatttgcatttgaagacaaataagatgagagttagaggatttctcaatggtttgaggaaca 25594767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 22229905 - 22230027
Alignment:
Q  159 acaagtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttc 258  Q
    |||||| ||||| ||  ||||||||| | |||||||| |||| | ||||||||||||||| |||||||||||||||||| | |||||||||||| |||||    
T  22229905 acaagtgttttgggtattttgtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaggatcaaagatatgga-attgaagatcaagggttc 22230003  T
Q  259 ttaaaaggtttttgaagacaatac 282  Q
    ||| |||||| ||||||| |||||    
T  22230004 ttagaaggttgttgaagataatac 22230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 7742857 - 7742761
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| ||||   ||| ||| ||||||| ||||| ||| |||||||||||| ||||||||||||||||||| ||||| ||||||||||||||    
T  7742857 gaaatcatgtaaatcagtaaaacaaaacatcacgtgaagaatcgaagatatgaagactgaagatcaatggttcttagaaggtctttgaagacaatac 7742761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 17027483 - 17027567
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||| ||| || ||||| |||||||||||||    
T  17027483 ttttggctatgtttttagtacttttctttgcatttaaagacaattaagatgagagttagaggcgtggtcaagggtttgaggaaca 17027567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 17382048 - 17381956
Alignment:
Q  169 tgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctta 261  Q
    |||||| ||||||||| |||||||||| |||||  |||||||||||| |  ||||||||||| ||||||||| ||||||| ||||||||||||    
T  17382048 tgagtgttttgtagtgagaaatcatgtaaatcgtcaaatcaagacataatgtgaaggatcaaggatatgaagtttgaagaccaatggttctta 17381956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 22229731 - 22229818
Alignment:
Q  44 ccttgcatattgatgacggaacatcatgtgttattttggctatgtttta-agtacttttctttggatttgaagacaaataagatgaga 130  Q
    ||||| || |||||||| || |||||| ||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  22229731 ccttggatgttgatgacagagcatcatatgtcattttggctatgttttttagtacttttctttgcatttgaagacaaataagatgaga 22229818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 20694767 - 20694863
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| |||||  ||| |||||||||| ||||||||| |  || || |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  20694767 gaaatcatgtaaatcggcaaaacaagacatcatatgaaggataacggacattaagattgaagataaatggttcttagaaggtatttgaagacaatac 20694863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 24841709 - 24841793
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| |||||||||| |||||| ||||||| ||||||||||||||||| | |||  || ||||||| ||||||||||||||||||    
T  24841709 tttttgctatgtttttagtactattctttgcatttgaagacaaataagtttagagatagaggagttttcaatggtttgaggaaca 24841793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 279
Target Start/End: Complemental strand, 25075397 - 25075207
Alignment:
Q  76 attttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaagtattttgagtgc 175  Q
    |||||||||||||||| |||| ||||||||| | |||||||||||||| || ||| ||| |||||||||| || |            || |||||||||     
T  25075397 attttggctatgtttttagtaattttctttgcacttgaagacaaataatattagagttagaggagttgtccatag------------gtgttttgagtgt 25075310  T
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaaggtttttgaa 274  Q
    ||||||||  |||||||||| ||||   ||||||||||||||  ||||||||||| |  |||||| |||||||||||| ||||||||||| ||| || ||    
T  25075309 tttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaatgttgttaaa 25075212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 279
Target Start/End: Complemental strand, 25133366 - 25133176
Alignment:
Q  76 attttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaagtattttgagtgc 175  Q
    |||||||||||||||| |||| ||||||||| | |||||||||||||| || ||| ||| |||||||||| || |            || |||||||||     
T  25133366 attttggctatgtttttagtaattttctttgcacttgaagacaaataatattagagttagaggagttgtccatag------------gtgttttgagtgt 25133279  T
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaaggtttttgaa 274  Q
    ||||||||  |||||||||| ||||   ||||||||||||||  ||||||||||| |  |||||| |||||||||||| ||||||||||| ||| || ||    
T  25133278 tttgtagtaagaaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaagaattgaagatcaagggttcttaaaatgttgttaaa 25133181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 273
Target Start/End: Complemental strand, 24410923 - 24410830
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttga 273  Q
    ||||| |||||||||| ||| |  |||  |||||||||||||||||||| | ||| |||||||| ||||||||||||||||| ||||| |||||    
T  24410923 tagtgagaaatcatgtcaattggcaaaataagacatcacatgaaggatcgaggatctgaagattcaagatcaatggttcttataaggtatttga 24410830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 18178217 - 18178325
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcg-aaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttga 273  Q
    |||| ||||| |||||||||| ||| | ||||| ||||||| | ||||||||||| | ||||||||||||||||| |||| ||||||  ||||| |||||    
T  18178217 ctttttagtgagaaatcatgtaaattggaaaaaacaagacaccgcatgaaggatcgaggatatgaagattgaagaccaattgttcttggaaggtctttga 18178316  T
Q  274 agacaatac 282  Q
    ||| |||||    
T  18178317 agataatac 18178325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 18222449 - 18222533
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| ||||| |||| |||| |||| |||  ||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  18222449 ttttagctatatttttagtatttttatttctatttgaagacaaataagatgagagttagatgagttgtcaatggtttgagaaaca 18222533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 22968025 - 22967917
Alignment:
Q  54 tgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    ||||||||||  ||||| || |||||| ||||||||||| |||| ||||||||| || | |||||||||||||||    ||| ||||||||| |||||||    
T  22968025 tgatgacggagtatcatatgatattttaggctatgtttttagtagttttctttgcatgttaagacaaataagatggattttagaggagttgtgaatggtt 22967926  T
Q  153 tgaggaaca 161  Q
    |||||||||    
T  22967925 tgaggaaca 22967917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 15205575 - 15205683
Alignment:
Q  52 attgatgacggaacatcatgtgttattttggctatgttttaagtacttttc-tttggatttgaagacaaataagatgagaattataggagttgtcaatgg 150  Q
    ||||||||| || |||||| || ||||||| ||||||||| |||| ||||  |||| |||| || ||||||||||||||  ||| ||||||||||| |||    
T  15205575 attgatgacagagcatcatatgatattttgactatgtttttagtattttttatttgcatttaaatacaaataagatgag--ttaaaggagttgtcagtgg 15205672  T
Q  151 tttgaggaaca 161  Q
    |||||||||||    
T  15205673 tttgaggaaca 15205683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 12340024 - 12339906
Alignment:
Q  163 gtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttctta 261  Q
    |||||||| ||| ||||||||  | |||||| | |||| | ||||||||||||||| ||||||||||| |  |||||| |||||| ||||| ||||||||    
T  12340024 gtattttgcgtgttttgtagtaaggaatcatataaatcaacaaatcaagacatcacgtgaaggatcaagg--atgaagaattgaaaatcaagggttctta 12339927  T
Q  262 aaaggtttttgaagacaatac 282  Q
     |||||  |||||||||||||    
T  12339926 gaaggtcgttgaagacaatac 12339906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 16622826 - 16622742
Alignment:
Q  76 attttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||| |||||||||| |||| |||| |||  ||||||||||||||| ||  ||| ||| ||||||||||||||||||||||||||    
T  16622826 attttagctatgtttttagtattttt-tttacatttgaagacaaatacgaaaagagttaaaggagttgtcaatggtttgaggaaca 16622742  T

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Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 22755002 - 22755114
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagat--atgaagattgaagatcaatggttcttaaa 263  Q
    ||||||||| |||| |||| |||||||||| ||||   |||||||||||| || |  ||||||||||||  |||||  ||||||||||| |||||||| |    
T  22755002 ttttgagtgttttgaagtgagaaatcatgtaaatcatcaaatcaagacataacgtacaggatcaaagattaatgaa--ttgaagatcaagggttcttata 22755099  T
Q  264 aggtttttgaagaca 278  Q
    ||||| |||||||||    
T  22755100 aggttgttgaagaca 22755114  T

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Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 22754903 - 22754958
Alignment:
Q  76 attttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaa 131  Q
    ||||||| |||||||| ||||| |||||||| |||| |||||||||||||||||||    
T  22754903 attttggatatgtttttagtacgtttctttgcatttaaagacaaataagatgagaa 22754958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 282
Target Start/End: Original strand, 24130765 - 24130851
Alignment:
Q  198 atcgaaaaatcaagacatcacatgaaggatcaaa--gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||| |||| |||||||||||||||||||| | |  |||||||||| | || |||||||| ||||| |||||||||||| |||||||    
T  24130765 atcggaaaaacaagacatcacatgaaggattataaggatatgaagaataaatatcaatggatcttagaaggtttttgaatacaatac 24130851  T

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Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 24517473 - 24517568
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||||||| |||||  ||||||| ||||||| ||||||||||| ||||  ||||||| ||| |||||||| | | ||||||||| |||| ||||    
T  24517473 gaaatcatgtaaatcggtaaatcaatacatcacgtgaaggatcaaggatacaaagattgcagaccaatggttatcataaggttttttaagataata 24517568  T

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Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 26070409 - 26070512
Alignment:
Q  56 atgacggaacatcatgtgttattttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttga 155  Q
    |||| |||||||||| || | ||||||||||||||| |||  ||||||||| |||| ||| ||||||||| |  | ||| |||||||||||||  |||||    
T  26070409 atgatggaacatcatatgattttttggctatgtttttagttattttctttgcattttaaggcaaataagaggtcatttagaggagttgtcaatcatttga 26070508  T
Q  156 ggaa 159  Q
    ||||    
T  26070509 ggaa 26070512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 19763823 - 19763777
Alignment:
Q  236 tgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||||| |||||||| |||||||||||||| |||||    
T  19763823 tgaagattgaagatcaagggttcttagaaggtttttgaagataatac 19763777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 11997901 - 11997784
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaa-agatatgaagattgaagatcaatggttcttaaaa 264  Q
    ||||||||  ||| ||||| |||| ||||| |||||  | | |||||||||  || ||||||||| ||||||||||| |||||||||||| || ||| ||    
T  11997901 ttttgagttttttttagtgagaaaacatgtaaatcggcagagcaagacatcttattaaggatcaagagatatgaagaatgaagatcaatgatttttagaa 11997802  T
Q  265 ggtttttgaagacaatac 282  Q
    ||||||| |||| |||||    
T  11997801 ggtttttaaagataatac 11997784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 17695402 - 17695354
Alignment:
Q  234 tatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||| | ||||||||||||||| ||| ||||||||||||||||||||    
T  17695402 tatgaataatgaagatcaatggttattagaaggtttttgaagacaatac 17695354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 23157757 - 23157698
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    |||||||| || ||||| |||||||||| ||||||||||||| ||||| ||| |||||||    
T  23157757 tgaaggataaaggatattaagattgaagttcaatggttcttataaggtatttaaagacaa 23157698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 261
Target Start/End: Original strand, 25367702 - 25367796
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctta 261  Q
    |||||||| |||| ||||| |||||||||| ||||| ||||  ||| |||||||||||  ||| | |||| ||||||| ||| |||||||||||||    
T  25367702 ttttgagt-ctttttagtgagaaatcatgtaaatcggaaaagaaaggcatcacatgaaatatcgatgatacgaagattaaagttcaatggttctta 25367796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 23157926 - 23157864
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaac 160  Q
    ||||||||| ||||||||  |||| ||| |  ||||| |||||||||||||||||||||||||    
T  23157926 ttttctttgcatttgaaggaaaattagaagtcaattagaggagttgtcaatggtttgaggaac 23157864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 25680586 - 25680636
Alignment:
Q  111 tgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||||| ||||||||| |||| ||| || ||||||||||||||||||    
T  25680586 tgaagacaaaaaagatgagagttattggatttttcaatggtttgaggaaca 25680636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 11274479 - 11274411
Alignment:
Q  88 ttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgag 156  Q
    |||| |||||||||||||| |||| ||||| |||||||| |||  || |  ||||||||||||||||||    
T  11274479 tttttagtacttttctttgcatttaaagaccaataagataagagatagatcagttgtcaatggtttgag 11274411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 11769999 - 11769885
Alignment:
Q  168 ttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggt 267  Q
    ||||||| |||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||    
T  11769999 ttgagtgttttgcagtgagaaatcatgtaaatcgaaaaatcaagacatcacatgaatgatcaaagatatgaagattgaagaccaatggttcttagaaggt 11769900  T
Q  268 ttttgaagacaatac 282  Q
    |||||||||||||||    
T  11769899 ttttgaagacaatac 11769885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 166 - 280
Target Start/End: Complemental strand, 25727916 - 25727802
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| |||||||||| |||||| ||||||| | |||||||||||||| || |||||||||||||||||||||||||||||  |||    
T  25727916 ttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaag 25727817  T
Q  266 gtttttgaagacaat 280  Q
    |||||||||||||||    
T  25727816 gtttttgaagacaat 25727802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 166 - 280
Target Start/End: Complemental strand, 25736324 - 25736210
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| |||||||||| |||||| ||||||| | |||||||||||||| || |||||||||||||||||||||||||||||  |||    
T  25736324 ttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaatatatcacatgaaggattaaggatatgaagattgaagatcaatggttcttggaag 25736225  T
Q  266 gtttttgaagacaat 280  Q
    |||||||||||||||    
T  25736224 gtttttgaagacaat 25736210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 25494485 - 25494380
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||| ||||| ||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  25494485 tttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacattaaggagcaa-gatatgaagattgaagaccaatggttcttagaaggtttttgaag 25494387  T
Q  276 acaatac 282  Q
    |||||||    
T  25494386 acaatac 25494380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 166 - 280
Target Start/End: Complemental strand, 25730578 - 25730464
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||| | |||||||||| |||||| ||||||||| ||||||||||||||||| || ||||||||| ||||||||||||||||  |||    
T  25730578 ttttgagtgttttgtagcgagaaatcatgtaaatcgacaaatcaagatatcacatgaaggatcaaggagatgaagatttaagatcaatggttcttggaag 25730479  T
Q  266 gtttttgaagacaat 280  Q
    |||||||| ||||||    
T  25730478 gtttttgacgacaat 25730464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 18300988 - 18300894
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||| ||| || ||||||||||||||| ||||||||||| |||||||||||| || | |||||||||||| ||||||||||||||||||||    
T  18300988 aatcatgtaaatagacaaatcaagacatcacgtgaaggatcaaggatatgaagattaaataccaatggttcttagaaggtttttgaagacaatac 18300894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 27461153 - 27461072
Alignment:
Q  201 gaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||| |||||||||||||||| |||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  27461153 gaaaaaacaagacatcacatgaaagatcgaggatatgaagtatgaagatcaatggttcttaaaaggtttttgaagacaatac 27461072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 23223367 - 23223451
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||||||||||||||||||||||||| ||||  |||||| ||||||| || ||| ||||||||||||||||||||||||||    
T  23223367 ttttggctatgttttaagtacttttctttgcattttgagacaattaagatgggagttagaggagttgtcaatggtttgaggaaca 23223451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 281
Target Start/End: Complemental strand, 23519770 - 23519661
Alignment:
Q  171 agtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttt 270  Q
    |||| ||||||||| |||||||||| |||||| | |||||||||| || |||||||||||  ||||||| |||||||| |||||||||||| |||||| |    
T  23519770 agtgttttgtagtgagaaatcatgtaaatcgacacatcaagacattacgtgaaggatcaagaatatgaa-attgaagaccaatggttcttagaaggttgt 23519672  T
Q  271 tgaagacaata 281  Q
    |||||||||||    
T  23519671 tgaagacaata 23519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 12424097 - 12423989
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    ||||||| || |||||| || ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||   | ||| ||||| |||||||    
T  12424097 tgatgacagagcatcatatgatattttggctatgtttttagtactttttctttgcatttgaagacaaataagatgagagacagaggcgttgttaatggtt 12423998  T
Q  153 tgaggaaca 161  Q
    |||||||||    
T  12423997 tgaggaaca 12423989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 50047110 - 50047221
Alignment:
Q  51 tattgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatg 149  Q
    |||||||||||||| | ||| || |||||| |||||||||||   |||||||||||| ||||||||||||||||||||| || || ||||||||||||||    
T  50047110 tattgatgacggaataccatatgatatttttggctatgtttttgatacttttctttgcatttgaagacaaataagatgaaaagtagaggagttgtcaatg 50047209  T
Q  150 gtttgaggaaca 161  Q
     |||||| ||||    
T  50047210 atttgagaaaca 50047221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 30781868 - 30781983
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaa 264  Q
    ||||||||| ||||||||| | |||||||| ||||   ||||||||||||||  ||||||||||| |||  ||||| ||||||||||| |||||||||||    
T  30781868 ttttgagtgttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaaggatcaaggat--gaagaattgaagatcaagggttcttaaaa 30781965  T
Q  265 ggtttttgaagacaatac 282  Q
    |||| |||||||||||||    
T  30781966 ggttgttgaagacaatac 30781983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 282
Target Start/End: Original strand, 26102195 - 26102280
Alignment:
Q  197 aatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||| ||| ||||||||||| |||| |||||| |||||||||| |||||||||||| || ||| ||||||||||||||||||||    
T  26102195 aatcgacaaaacaagacatcacgtgaatgatcaaggatatgaagaatgaagatcaatgatttttagaaggtttttgaagacaatac 26102280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 26657584 - 26657696
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| |||||||||  ||||||||| |||||| |||||||||||| |  ||||||||||| | |||||| || |||| ||||| ||||||| |||    
T  26657584 ttttgagtgttttgtagtgaaaaatcatgtaaatcgacaaatcaagacattaggtgaaggatcaaggctatgaaaatcgaag-tcaatagttcttataag 26657682  T
Q  266 gtttttgaagacaa 279  Q
    ||||||||||||||    
T  26657683 gtttttgaagacaa 26657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 8247840 - 8247732
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtac-ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    ||||||| || |||||| ||  |||||| ||||||||| | ||| ||||||||| ||||||||||||||||||||||| ||| ||||| | |||||||||    
T  8247840 tgatgacagagcatcatatgacattttgactatgtttttaataccttttctttgcatttgaagacaaataagatgagagttagaggagatatcaatggtt 8247741  T
Q  153 tgaggaaca 161  Q
    |||||||||    
T  8247740 tgaggaaca 8247732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 30675592 - 30675707
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||| ||||| |||||||||| |||||  || | |||||||||  |||||||||||  || ||||||||||| |||||||||||||| |||    
T  30675592 ttttgagtgttttatagtgagaaatcatgtaaatcggcaatttaagacatcatgtgaaggatcaagaatgtgaagattgaa-atcaatggttcttagaag 30675690  T
Q  266 gtttttgaagacaatac 282  Q
    ||||||||||| |||||    
T  30675691 gtttttgaagataatac 30675707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 31313679 - 31313775
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| ||| | |||| ||| ||||||| |||||||| ||  ||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  31313679 gaaatcatgtaaattggaaaaacaatacatcacgtgaaggattaagaatatgaagaatgaagatcaatgattcttataaggtttttgaagacaatac 31313775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 12810284 - 12810362
Alignment:
Q  83 ctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||| |||||||||||||  |||| |||||||||||| |||||  || ||||||||||||||||||||||||||    
T  12810284 ctatgtttttagtacttttctttatatttaaagacaaataagttgagagatagaggagttgtcaatggtttgaggaaca 12810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 15416960 - 15416866
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaag-atatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 280  Q
    ||||||||| | |||  ||| ||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  15416960 aaatcatgtaattcggcaaagcaagacaccacatgaaggatcaagggatatgaagaatgaagatcaatggttcttataaggtttttaaagacaat 15416866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 26657432 - 26657514
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    ||||| ||||||||| | |||||||||||| ||||||||||||||| | |||||  || ||||||||||||||||||||||||    
T  26657432 ttttgactatgtttttattacttttctttgcatttgaagacaaatatgttgagagatagaggagttgtcaatggtttgaggaa 26657514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 30675439 - 30675524
Alignment:
Q  77 ttttggctatgttttaagtacttttctttgg-atttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| |||||||||| || ||||||||||   ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  30675439 tttttgctatgtttttagaacttttctttttcatttgtagacaaataagatgaaaattagaggagttgtcaatggtttgaggaaca 30675524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 50047325 - 50047398
Alignment:
Q  209 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||| ||||| ||||||||||| | |||||| |||||||||||||||| ||||||||||| |||||||||||||    
T  50047325 aagaaatcacgtgaaggatcaagggtatgaatattgaagatcaatggtacttaaaaggttattgaagacaatac 50047398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 21451976 - 21451900
Alignment:
Q  76 attttggctatgttttaagtac-ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggt 151  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||  || | ||||||||||||||    
T  21451976 attttggctatgtttttagtacgttttctttgcatttgaagacaaataagatgagagatagaagagttgtcaatggt 21451900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 26854307 - 26854211
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| || ||  ||| |||||||| |  ||||||||||| |||||||||||||||| ||||||||||||| ||| | ||||||||||||||    
T  26854307 gaaatcatgtaaaccggcaaaacaagacattaagtgaaggatcaatgatatgaagattgaagttcaatggttcttagaagatatttgaagacaatac 26854211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 24903433 - 24903370
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||| ||||||||||||||| |||||||||||  ||||||||||||| |||||||||||    
T  24903433 ttttctttgcatttgaagacaaatatgatgagaattagtggagttgtcaatgatttgaggaaca 24903370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 18301164 - 18301080
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaa--ataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    |||| ||||||||||  ||||||||||||| ||||||||||||  | || |||||| ||||||| ||||||||||||||||||||    
T  18301164 ttttagctatgtttttggtacttttctttgcatttgaagacaaacaaaaaatgagagttataggggttgtcaatggtttgaggaa 18301080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 25730729 - 25730649
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgagga 158  Q
    |||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| ||| | ||||||||| |||||||    
T  25730729 tttttgctatgtttta-gtacttttctttgcatttgaaaacaaataagatgagagttagagggggtgtcaatggcttgagga 25730649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 34381839 - 34381920
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtt 268  Q
    |||| |||| |||||| ||||||| ||||||| |||| |||||| ||||||||| |||||||||||||||| ||| ||||||    
T  34381839 aaataatgtaaatcgacaaatcaaaacatcacgtgaaagatcaaggatatgaagtttgaagatcaatggttgttataaggtt 34381920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 11770153 - 11770069
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||| ||||||||| | |||| ||||||| ||||||||| ||||||||||||| ||| || | ||||||||||||| |||||||    
T  11770153 ttttgtctatgtttttaatactattctttgcatttgaagataaataagatgagagttagagaatttgtcaatggtttaaggaaca 11770069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 23521726 - 23521635
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtt 268  Q
    ||||||||| |||||||||| |||||| | ||||||||||||| |||||||| |   ||||||| |||||||| |||||||||||| ||||||    
T  23521726 tttgtagtgagaaatcatgtaaatcgacacatcaagacatcacgtgaaggataaggaatatgaa-attgaagaccaatggttcttagaaggtt 23521635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 30781703 - 30781783
Alignment:
Q  65 catcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgt 144  Q
    ||||||| | |||||| |||||||||| |||| |||| ||||| ||||||||||||||||||||||| ||| |||||||||    
T  30781703 catcatgcgatatttttgctatgtttttagtaatttttctttgcatttgaagacaaataagatgagagttagaggagttgt 30781783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 52271251 - 52271136
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| ||||| |||| |||||  ||| ||| ||  ||| ||||||||| | |||||||||||||||| |||||||| |||| |||    
T  52271251 ttttgagt-ctttttagtgagaaattatgtaaatcggcaaaacaaaacgccacgtgaaggatcgaggatatgaagattgaagttcaatggtacttagaag 52271153  T
Q  266 gtttttgaagacaatac 282  Q
    || ||||||||||||||    
T  52271152 gtatttgaagacaatac 52271136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 19257769 - 19257697
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||||||| |||| | ||||||||||||||| |||||  ||||||| ||||| ||||||||||||||    
T  19257769 caagacatcacatgaaagatcgaggatatgaagattgaacatcaa--gttcttagaaggtctttgaagacaatac 19257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 23223530 - 23223637
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaagg-tttttgaa 274  Q
    ||||||||| |||||||||| |||| | || |||||||||| |||||||  |||| ||||||||||||||| | ||||  ||| || |||| ||||||||    
T  23223530 tttgtagtgagaaatcatgtaaatcaacaagtcaagacatcgcatgaagattcaaggatatgaagattgaaaaccaataattcatagaaggttttttgaa 23223629  T
Q  275 gacaatac 282  Q
    ||||||||    
T  23223630 gacaatac 23223637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 31319581 - 31319504
Alignment:
Q  203 aaaatcaagacatcacatgaaggatcaa-agatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 280  Q
    |||| ||||||| ||||| ||||||||| ||||||||| | ||||||||||||||||||| ||| ||||||||||||||    
T  31319581 aaaagcaagacaccacat-aaggatcaagagatatgaataatgaagatcaatggttcttagaagttttttgaagacaat 31319504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 15298856 - 15298768
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    ||||||||| |||||  ||| ||||| ||||  | ||||||| | |||||||||||| ||||||||||||||||||||| | |||||||    
T  15298856 aaatcatgtaaatcggcaaaacaagaaatcatgtaaaggatcgaggatatgaagattcaagatcaatggttcttaaaagttatttgaag 15298768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 25373907 - 25373969
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||| | |||||||||||| |||| |||||||||||| |||||| || ||||||||||    
T  25373907 tgaaggatccaggatatgaagattaaagaccaatggttcttagaaggttgtttaagacaatac 25373969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 8247664 - 8247570
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttctta 261  Q
    ||||||||| ||||||||| | |||||||| |||| | ||||||||||||||| |||| |||||| |  |||||| ||||| |||||| ||||||||    
T  8247664 ttttgagtgttttgtagtgaggaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcaagg--atgaagaattgaggatcaagggttctta 8247570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 9328341 - 9328391
Alignment:
Q  232 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatact 283  Q
    |||||||||||||||  ||||| ||||||| |||||||||||||||||||||    
T  9328341 gatatgaagattgaat-tcaatcgttcttagaaggtttttgaagacaatact 9328391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 18795122 - 18795221
Alignment:
Q  63 aacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||| |||||| ||||||||||  |||  ||||||||| ||||||||  |||||||| |  | ||| |||| || ||||||||||||||||||    
T  18795122 aacatcatgtgatattttaggctatgtttctagtgattttctttgcatttgaaggaaaataagaggtcatttagaggatttatcaatggtttgaggaaca 18795221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 18795330 - 18795381
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttct 259  Q
    ||||||||||||||| |||||||||||||||| | ||||||| |||| ||||    
T  18795330 caagacatcacatgatggatcaaagatatgaaaagtgaagatgaatgattct 18795381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 18391232 - 18391294
Alignment:
Q  209 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggttttt 271  Q
    |||||||||||||||| || || ||| | || |  ||||||||||||||||||||||||||||    
T  18391232 aagacatcacatgaagaatgaaggatttaaaaaacgaagatcaatggttcttaaaaggttttt 18391294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 25266503 - 25266430
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggt 151  Q
    |||||| |||||||| |||||||||||||| ||||||||||| | ||||| |||  || || |||||||||||||    
T  25266503 ttttggttatgtttttagtacttttctttgcatttgaagacaga-aagataagagatagagaagttgtcaatggt 25266430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 12423847 - 12423806
Alignment:
Q  241 attgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||| |||||||| |||||| |||||||||||||    
T  12423847 attgaagatcaaaggttcttagaaggttgttgaagacaatac 12423806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 23519903 - 23519830
Alignment:
Q  88 ttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| ||||||||||||||  |||||||||||||| |||||||  || |  |||||| ||| ||||||||||||    
T  23519903 tttttagtacttttctttgcttttgaagacaaatatgatgagagatagaaaagttgttaatagtttgaggaaca 23519830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 34381671 - 34381748
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||| | || |||| |||| |||||||| |||||||||||  | ||| ||||||||| |||||||||| |||||    
T  34381671 tatgtttttattagttttatttgcatttgaaggcaaataagatgtaatttagaggagttgttaatggtttgaagaaca 34381748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 18391046 - 18391122
Alignment:
Q  85 atgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||| |||  |||||| || |||| |||||||||||||||  | ||| || |||||||||||||||||| ||||    
T  18391046 atgtttttagttattttctgtgtatttaaagacaaataagatgtcatttaaagaagttgtcaatggtttgagtaaca 18391122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 25494598 - 25494554
Alignment:
Q  117 caaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||| ||||| | ||| ||||||||||||||||||||||||||    
T  25494598 caaataggatgaaagttagaggagttgtcaatggtttgaggaaca 25494554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 29544622 - 29544743
Alignment:
Q  161 aagtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    |||| ||||||||| ||| ||||  | |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29544622 aagtgttttgagtgttttttagtaaggaatcatgtaaatcgacaaaccaagacatcacatgaaggatcaaagatatgaagattgaagatcaatgattctt 29544721  T
Q  261 aaaaggtttttgaagacaatac 282  Q
    | ||||||||||||||||||||    
T  29544722 agaaggtttttgaagacaatac 29544743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 7494814 - 7494919
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||   |||||    
T  7494814 tttgtagtgggaaatcatgtaaattgaaaaatcaagacatcacatgaaggatcaaggatatgaagattgaag-ttaatggttcttagaaggtccatgaag 7494912  T
Q  276 acaatac 282  Q
    |||||||    
T  7494913 acaatac 7494919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 7142206 - 7142321
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||| |||| ||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||  || |||||| |||| ||    
T  7142206 ttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatgaagattgaa-ttcgatggtttttaatag 7142304  T
Q  266 gtttttgaagacaatac 282  Q
    ||||||||||| |||||    
T  7142305 gtttttgaagagaatac 7142321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 9761401 - 9761313
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaaga 276  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  9761401 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaaga 9761313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 20470817 - 20470701
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||| |||||  ||| ||||| |||||| ||||||||||||| |||||| |||||| ||| |||| ||||||| ||||||||||||| |||    
T  20470817 ttttgagtgttttatagtgataaagcatgtaaatcgacaaatcaagacatcgcatgaacgatcaaggatgtgaatattgaagttcaatggttcttagaag 20470718  T
Q  266 gtttttgaagacaatac 282  Q
    ||| |||||||||||||    
T  20470717 gttcttgaagacaatac 20470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 23125008 - 23125124
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||| ||||| |||||||||| ||||||  |||||||||||||  ||||||||| | |||||||||||||||| ||||||||||||| |||    
T  23125008 ttttgagtgttttctagtgagaaatcatgtaaatcgaccaatcaagacatcatgtgaaggatcgaggatatgaagattgaagttcaatggttcttataag 23125107  T
Q  266 gtttttgaagacaatac 282  Q
     || || ||||||||||    
T  23125108 attcttaaagacaatac 23125124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 29544475 - 29544559
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||| | || ||||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  29544475 ttttggctatgtttttattaattttctttgcatttgaagacaaataagatgagagttagaggagttgtcaatagtttgaggaaca 29544559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 9801860 - 9801766
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||| |||||| ||||||| ||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  9801860 aaatcatgtaaatcgacaaatcaaaacatcatgtgaaggatcaaggatatgaagattgaag-tcaatggttcttaaaaggtttttaaagaaaatac 9801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 1074574 - 1074676
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| ||| | |||| ||||||||||  | ||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||    
T  1074574 tagtgagaaatcatgtaaattggaaaagcaagacatcaagtaaaggatcaaggatatgaaaattgaagaccaatggttcttaaaaggttgttgaagacaa 1074673  T
Q  280 tac 282  Q
    |||    
T  1074674 tac 1074676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 22067967 - 22067881
Alignment:
Q  76 attttggctatgttttaagtacttttc-tttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||||||||||| |||| ||||  |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  22067967 attttggctatgtttttagtaatttttatttgcatttgaagacaaataagatgagagttaaaggagttgtcaatggtttgaggaaca 22067881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 20470969 - 20470885
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||| |||||| ||||||||| |||  || |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  20470969 ttttggctttgtttttagtacttttatttatatgtgaagacaaataagatgataattagaggagttgtcaatggtttgaggaaca 20470885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 281
Target Start/End: Complemental strand, 21545789 - 21545719
Alignment:
Q  211 gacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||| || || |||||||||||||    
T  21545789 gacatcacgtgaaggatcaaggatatgaagattgaagatcaatggttcttagaaagtatttgaagacaata 21545719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 12358711 - 12358655
Alignment:
Q  225 gatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12358711 gatcaaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaata 12358655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 20446171 - 20446271
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    ||||||| || || ||| || |||||| |||||||||| | ||||||| ||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  20446171 tgatgacagagcaacatatgatattttagctatgtttttaatactttttctttgcatttgaagacaattaagatgagaattagaggagttgtcaatggtt 20446270  T
Q  153 t 153  Q
    |    
T  20446271 t 20446271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 22532637 - 22532538
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| |||||  ||| ||||||||||||||| ||||| | |||| ||||| |||| |||||||||||||| || ||||||||||||||    
T  22532637 tagtgagaaatcatgtaaatcggcaaa-caagacatcacatgatggatcgaggatacgaagaatgaatatcaatggttcttagaaagtttttgaagacaa 22532539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 3268964 - 3268868
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggttttt 271  Q
    |||| ||||| |||||||||| |||||  ||| ||||| |||||||||||||||||  ||||||||| |||| || |||| |||||||||| |||||    
T  3268964 ctttttagtgagaaatcatgtaaatcggcaaaacaagatatcacatgaaggatcaagtatatgaagaatgaaaattaatgattcttaaaagcttttt 3268868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 7142054 - 7142138
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||| | || ||||||||| |||| |||||||||||| |||||   ||| |||||||||||||||| |||||||    
T  7142054 ttttggctatgtttttaatagttttctttgcatttaaagacaaataagttgagagagatatgagttgtcaatggtttaaggaaca 7142138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 7815267 - 7815355
Alignment:
Q  66 atcatgtgttattttggctatgttttaagtacttttct-ttggatttgaagacaaataagatgagaattataggagttgtcaatggttt 153  Q
    ||||| || |||||||| |||||||| ||||||||| | ||| ||||||||| ||||||||||||| ||| |||| |||||||||||||    
T  7815267 atcatatgatattttggttatgtttttagtacttttttgttgcatttgaagataaataagatgagagttaaaggacttgtcaatggttt 7815355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 20446348 - 20446425
Alignment:
Q  204 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||  |||||||||||||||  ||||| ||||||||||| |||||||| |||||| |||||||||||||    
T  20446348 aaatcaagacatcaagtgaaggatcaaagat--gaagaattgaagatcaagggttcttagaaggttgttgaagacaatac 20446425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 4977813 - 4977746
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaag 247  Q
    ||||| |||||||||| |||  | ||||||||||||||||||||||||| | ||||||||||||||||    
T  4977813 tagtgagaaatcatgtaaatatacaaatcaagacatcacatgaaggatcgaggatatgaagattgaag 4977746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 315129 - 315219
Alignment:
Q  66 atcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttga 155  Q
    ||||| || ||||||| |||||||||  |||||||| |||   ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  315129 atcatatgatattttgactatgttttcggtactttttcttaatatttgaagaaaaataagatgagagttagaggagttgtcaatggtttga 315219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 1255340 - 1255290
Alignment:
Q  109 tttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  1255340 tttgaagacaaataagttgagagttagaggagttgtcaatggtttgaggaa 1255290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 5312739 - 5312677
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||| ||||||| ||||||| || ||||||||||| ||| ||||||||||||||||    
T  5312739 tgaaggatcaaggatatgaggattgaacataaatggttcttagaagatttttgaagacaatac 5312677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 23124863 - 23124940
Alignment:
Q  83 ctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||| |||||||| ||||  ||||||||||||||||||||||| ||| ||||||||| | |||| |||||||||    
T  23124863 ctatgtttttagtacttt-ctttacatttgaagacaaataagatgagatttagaggagttgttagtggtctgaggaaca 23124940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 30405715 - 30405817
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| |||||  |||  |||| ||||  ||||||||| | |||||||||||||||| |||||| |||||| ||||| |||||| ||||    
T  30405715 tagtgagaaatcatgtaaatcggcaaaataagaaatcatgtgaaggatcgaggatatgaagattgaagttcaatgattcttagaaggtatttgaatacaa 30405814  T
Q  280 tac 282  Q
    |||    
T  30405815 tac 30405817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 20017080 - 20017176
Alignment:
Q  186 gaaatcatgttaatcgaaaaatc-aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||  |||| ||||| |||||||||  |||||||| ||  ||||||||||||||  ||||||||||||| |||||| |||||||||||||    
T  20017080 gaaatcatgtttctcgacaaatccaagacatcatgtgaaggattaagcatatgaagattgaac-tcaatggttcttagaaggttcttgaagacaatac 20017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 14649663 - 14649719
Alignment:
Q  226 atcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||| |||||||| | ||||||||||||||| ||| ||||||||||||||||||||    
T  14649663 atcaaggatatgaataatgaagatcaatggttattagaaggtttttgaagacaatac 14649719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 21471729 - 21471825
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatg 149  Q
    ||||||| || |||||| ||  ||||||| |||||||| ||||||||| | ||| ||||||||||||||||||||| | ||| |||| |||||||||    
T  21471729 tgatgacagagcatcatatgccattttggttatgtttttagtactttttccttgcatttgaagacaaataagatgatatttagaggatttgtcaatg 21471825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 18496726 - 18496788
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||| |||||||||||||||||  ||||||||||| || ||| ||||||| |||||    
T  18496726 tgaaggatcaaggatatgaagattgaagaataatggttcttagaatgttgttgaagaaaatac 18496788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 46054845 - 46054918
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||| |||||| |||||| ||||||||||||||||||||| ||| | ||||| || ||| |||||||||||||    
T  46054845 caagacgtcacataaaggattaaagatatgaagattgaagattaat-gatcttacaaagttgttgaagacaatac 46054918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 1255220 - 1255135
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatca 251  Q
    ||||||||| |||||| ||  |||| || | |||| | ||||||| ||||||||||||||||||| |||| ||||| |||||||||    
T  1255220 ttttgagtgttttgtaatgaaaaattatttaaatcaacaaatcaaaacatcacatgaaggatcaaggatacgaagaatgaagatca 1255135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 281
Target Start/End: Complemental strand, 7778024 - 7777933
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||||| |||| | ||| ||||||||||| ||||||||||| |||||||| |||||| |  ||| |||||||||||||| |||| |||||||    
T  7778024 aatcatgtaaatcaacaaagcaagacatcacgtgaaggatcaacgatatgaa-attgaaaactaat-gttcttaaaaggttgttgaggacaata 7777933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 9070506 - 9070610
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    |||| |||| |||||||||| ||| ||  ||| |||||||| | ||||||||||| |||||||| || ||| |||||  ||||||| ||||||||| |||    
T  9070506 tttgaagtgagaaatcatgtaaattgacgaataaagacatcgcgtgaaggatcaaggatatgaatatcgaa-atcaagtgttcttagaaggttttttaag 9070604  T
Q  276 acaata 281  Q
    ||||||    
T  9070605 acaata 9070610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 20461646 - 20461573
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaaga 248  Q
    |||| ||||| |||||||||| |||||  |||  |||||||||  ||||||||||| |||||||||||||||||    
T  20461646 ctttttagtgagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcaaggatatgaagattgaaga 20461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 2630482 - 2630369
Alignment:
Q  167 tttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaag 265  Q
    |||||||| ||||||||| | |||||||| ||||   ||||||||||||||  ||||| ||||| |  |||||| |||||||||||| |||||||||  |    
T  2630482 tttgagtgttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaagg--atgaagaattgaagatcaagggttcttaattg 2630385  T
Q  266 gtttttgaagacaata 281  Q
    ||| || |||||||||    
T  2630384 gttgttaaagacaata 2630369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 9755915 - 9755983
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaaga 248  Q
    ||||| |||||||||  |||||| ||||| ||||||||  ||||||||||| |||||||||||| ||||    
T  9755915 tagtgagaaatcatgcaaatcgacaaatctagacatcatgtgaaggatcaacgatatgaagattaaaga 9755983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 9800711 - 9800779
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaaga 248  Q
    ||||| |||||||||  |||||| ||||| ||||||||  ||||||||||| |||||||||||| ||||    
T  9800711 tagtgagaaatcatgcaaatcgagaaatctagacatcatgtgaaggatcaatgatatgaagattaaaga 9800779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 19140133 - 19140085
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataaga 125  Q
    |||||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  19140133 ttttggctatgttttaagttattttctttgcatttgaagacaaaaaaga 19140085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 20739532 - 20739484
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataaga 125  Q
    |||||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  20739532 ttttggctatgttttaagttattttctttgcatttgaagacaaaaaaga 20739484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 21545957 - 21545874
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||| ||||||||| |||||||||||||    ||||||||||  ||||||| ||||| |  |||||||||||||||||||||||    
T  21545957 ttttgactatgtttttagtacttttcttttccattgaagacaac-aagatgataattaaataagttgtcaatggtttgaggaaca 21545874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 2353227 - 2353132
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaag-atatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||| |||||| ||| ||||||||| ||||| ||||||| | || |||| | ||||||||||||||| ||| ||||| |||  |||||||||    
T  2353227 aatcatgtaaatcgacaaagcaagacatctcatgatggatcaatggatgtgaaaaatgaagatcaatggttattagaaggtgtttatagacaatac 2353132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 3487353 - 3487287
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaa 252  Q
    |||||||||| |||||  ||| |||||||||| |||||||||||| ||||| ||||| ||| |||||    
T  3487353 gaaatcatgtgaatcggcaaaacaagacatcaaatgaaggatcaatgatataaagatcgaacatcaa 3487287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 282
Target Start/End: Complemental strand, 10253677 - 10253631
Alignment:
Q  236 tgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||||||| | |||| | ||||||||||||||||||    
T  10253677 tgaagattgaagatcaatgatacttatagggtttttgaagacaatac 10253631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 7493495 - 7493536
Alignment:
Q  241 attgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  7493495 attgaagatcaagggttcttaaaaggttattgaagataatac 7493536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 22067811 - 22067694
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcat--gttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaa-gattgaagatcaatggttcttaa 262  Q
    ||||||||| ||||||||| | ||||||  || ||||   ||||||||||||||  ||||||||||| |  |||||  |||||| ||||| ||||||||     
T  22067811 ttttgagtgttttgtagtgaggaatcatatgtaaatcatcaaatcaagacatcatgtgaaggatcaagg--atgaacaattgaaaatcaagggttcttag 22067714  T
Q  263 aaggtttttgaagacaatac 282  Q
    |||||| |||||||||||||    
T  22067713 aaggttgttgaagacaatac 22067694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 315319 - 315396
Alignment:
Q  204 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||  |||||||||||||  ||||||| ||||||| |||  ||||||  |||||| |||||||||||||    
T  315319 aaatcaagacatcatgtgaaggatcaaag--atgaagagttgaagaacaacagttctttgaaggttgttgaagacaatac 315396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 7494667 - 7494751
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||  ||| |||||||||||||| | ||||||||||| | | |||||  || |  |||||| ||||||||||||||||    
T  7494667 ttttggctattcttttagtacttttctttgcacttgaagacaaacaggttgagagataaaatagttgttaatggtttgaggaaca 7494751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 7815431 - 7815546
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| |||||||||   |||||||| |||| | |||| |||||||||  ||||||||||| ||||| |  ||||||||||||  |||   | |||    
T  7815431 ttttgagtgttttgtagtgatgaatcatgtaaatcaacaaataaagacatcatgtgaaggatcaaggatat-agaattgaagatcaaaagttgacagaag 7815529  T
Q  266 gtttttgaagacaatac 282  Q
    ||| |||||||||||||    
T  7815530 gttgttgaagacaatac 7815546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 9385463 - 9385527
Alignment:
Q  96 acttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaac 160  Q
    ||||||| ||| |||||||||||| ||||||||||  ||  |||||||| |||||||||| ||||    
T  9385463 acttttccttgcatttgaagacaattaagatgagagatagtggagttgttaatggtttgatgaac 9385527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 46054675 - 46054739
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaa 162  Q
    |||| |||| |||||||| |||||||||||  | ||| ||||||||||| || ||||||||||||    
T  46054675 ttttttttgtatttgaaggcaaataagatgtcatttaaaggagttgtcattgatttgaggaacaa 46054739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 9e-36; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 34864302 - 34864187
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||    
T  34864302 ttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaagatatggagattgaag-tcaatggttcttagaag 34864204  T
Q  266 gtttttgaagacaatac 282  Q
    ||||||| |||||||||    
T  34864203 gtttttgtagacaatac 34864187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 166 - 280
Target Start/End: Original strand, 15192311 - 15192424
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| |||||||||| |||||| ||| ||||||||||| ||||||||||| |||||||| |||||||| |||||||||||| |||    
T  15192311 ttttgagtgttttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcttagaag 15192409  T
Q  266 gtttttgaagacaat 280  Q
    ||| |||||||||||    
T  15192410 gttgttgaagacaat 15192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 47024762 - 47024665
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaa 274  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||    
T  47024762 tttgtagtgagaaatcatgtaaatcgaaaaatcaagacatcgcatgaaggatcaaggacatgaagattgaag-tcaatggttcttagaaggtttttgaa 47024665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 18898100 - 18898205
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||||||||| | | |||| ||||||||| ||| ||||||||||||||||||||||     
T  18898100 tttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatccagggtatgcagattgaag-tcagtggttcttaaaaggtttttgaat 18898198  T
Q  276 acaatac 282  Q
    |||||||    
T  18898199 acaatac 18898205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 25315238 - 25315123
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||  ||||||||| | |||||||| |||||| ||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||||||||||||     
T  25315238 ttttgagtaatttgtagtgaggaatcatgtaaatcgacaaatcaagacatcgcatgaaggatcaaggatatgaa-attaaagataaatggttcttaaaat 25315140  T
Q  266 gtttttgaagacaatac 282  Q
    ||| |||||||||||||    
T  25315139 gttgttgaagacaatac 25315123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 19601903 - 19602020
Alignment:
Q  163 gtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaa 262  Q
    ||||||| || | ||| ||||| |||||||||| |||| | ||||||||||||||| |||| |||| | ||||||| ||||||||| |||||||||||||    
T  19601903 gtatttttagcgttttctagtgagaaatcatgtaaatcaacaaatcaagacatcacgtgaaagatcgaggatatgatgattgaaga-caatggttcttaa 19602001  T
Q  263 aaggtttttgaagacaata 281  Q
    |||||||||||||||||||    
T  19602002 aaggtttttgaagacaata 19602020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 5906881 - 5906795
Alignment:
Q  75 tattttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||| |||||||||| ||||||||| |||| ||||||||||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  5906881 tatttttgctatgtttttagtacttttatttgcatttgaagacaaacaagatgagagttagaggaattgtcaatggtttgaggaaca 5906795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 17026703 - 17026588
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||   ||||||||| |||||| |||| ||||||||||||||||||||||  ||||||  ||| ||| | ||||||||||||||     
T  17026703 ttttgagtgttttgtagtcataaatcatgtaaatcgacaaattaagacatcacatgaaggatcaagtatatgagaatttaag-ttaatggttcttaaaaa 17026605  T
Q  266 gtttttgaagacaatac 282  Q
    |||||||||||||||||    
T  17026604 gtttttgaagacaatac 17026588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 34864443 - 34864367
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaac 160  Q
    |||||||| |||||||||||||| ||||||||||||||||||| | | ||| |||||||||||||||||||||||||    
T  34864443 tatgtttttagtacttttctttgtatttgaagacaaataagataaaagttagaggagttgtcaatggtttgaggaac 34864367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 5676329 - 5676423
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||| ||| || ||||||||||||||||||||||||||| ||||| ||| ||||| |  |||| |||||| ||||||||||||||||||||    
T  5676329 aatcatgtaaattgataaatcaagacatcacatgaaggatcaaggatattaagtttgaatacaaatgattcttagaaggtttttgaagacaatac 5676423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 7024184 - 7024110
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| || ||||||| |||||    
T  7024184 caagacatcacgtgaaggatcaaagatatgaagattgaagaccaatggttcttagaagattcttgaagataatac 7024110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 46647344 - 46647418
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||    
T  46647344 caagacatcacgtgagggatcaaagatatgaaaaatgaagatcaatggttcttaaaaggtttttaaagataatac 46647418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 12111332 - 12111219
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| ||| || ||| |||||| |||||||| |||||| ||||||||| |||||||||| ||||||| ||||||||||||| |||    
T  12111332 ttttgagtgttttgtagtgagaa-tcttgtaaatcgacaaatcaagtcatcacgtgaaggatc-aagatatgaatattgaag-tcaatggttcttataag 12111236  T
Q  266 gtttttgaagacaatac 282  Q
    |||||| |||| |||||    
T  12111235 gttttttaagataatac 12111219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 31859907 - 31859792
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| |||||||||| ||||   ||| ||||||| ||  ||||||||| | |||||||| ||||||||||||||||||||| |||    
T  31859907 ttttgagt-ctttttagtgagaaatcatgtaaatcagcaaaacaagacaccaggtgaaggatcgaggatatgaatattgaagatcaatggttcttagaag 31859809  T
Q  266 gtttttgaagacaatac 282  Q
    || ||||||||||||||    
T  31859808 gtatttgaagacaatac 31859792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 9288326 - 9288412
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctta 261  Q
    |||| ||||| |||||||||| |||||  ||| ||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||    
T  9288326 ctttttagtgagaaatcatgtaaatcggcaaaacaagacatcaagtgaaggatcaaggatatgaagattgaagaccaatggttctta 9288412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 13064553 - 13064647
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 280  Q
    |||||||||| ||| |  ||||||||||||||| ||||||||||| |||| || |||||||| ||||||||||||| | ||| ||||||||||||    
T  13064553 gaaatcatgtaaattggcaaatcaagacatcacgtgaaggatcaaggataagacgattgaagttcaatggttcttagagggtatttgaagacaat 13064647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 12111482 - 12111407
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||| ||||||||| |||| ||||||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  12111482 tatgtttttagtacttttatttgcatttgaagacaaa-aagatgagaat-agaggagttgtcaatggtttgaggaaca 12111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 17339792 - 17339707
Alignment:
Q  196 taatcgaaaaatcaagacatcacatgaaggatcaa-agatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 280  Q
    ||||||| ||| ||||| ||||||||||||||||| ||||||| ||| ||||||||| || |||||||||| ||||||||||||||    
T  17339792 taatcgacaaagcaagatatcacatgaaggatcaagagatatggagaatgaagatcagtgattcttaaaagatttttgaagacaat 17339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 1676454 - 1676370
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||| ||| ||||  ||||||||||||  ||||||||||||||||||||| |  || ||||||||||||||||||||||||||    
T  1676454 ttttggttatattttttgtacttttctttacatttgaagacaaataagatgaaagatagaggagttgtcaatggtttgaggaaca 1676370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 1682982 - 1682898
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||| ||| ||||  ||||||||||||  ||||||||||||||||||||| |  || ||||||||||||||||||||||||||    
T  1682982 ttttggttatattttttgtacttttctttacatttgaagacaaataagatgaaagatagaggagttgtcaatggtttgaggaaca 1682898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 25315418 - 25315306
Alignment:
Q  50 atattgatgacggaacatcatgtgttattttggctatgtttta-agtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaat 148  Q
    ||||||||||| || |||||| ||  ||||| | ||||||||  |||||||||||||  ||||||||| |||||||||||||  || |||||||||||||    
T  25315418 atattgatgaccgagcatcatatgacattttagttatgttttttagtacttttctttacatttgaagataaataagatgagagatagaggagttgtcaat 25315319  T
Q  149 ggtttgaggaaca 161  Q
    | |||||||||||    
T  25315318 gctttgaggaaca 25315306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 33519138 - 33519253
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| |||||||||| |||||  ||||||| ||||| | ||||| ||  | ||||||| |||||||||||||| ||||||| |||    
T  33519138 ttttgagt-ctttttagtgagaaatcatgtgaatcggcaaatcaaaacatctcttgaagaattgaggatatgacgattgaagatcaatcgttcttagaag 33519236  T
Q  266 gtttttgaagacaatac 282  Q
    || ||||||||||||||    
T  33519237 gtctttgaagacaatac 33519253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 5906749 - 5906654
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||| || ||| ||| ||||| ||||||||||||||| |  |||| |||||| ||||| ||||||||||| |||||||||||||| |||||    
T  5906749 aaatcatgtaaaccgacaaaccaagatatcacatgaaggatctagaatattaagatttaagattaatggttcttagaaggtttttgaagataatac 5906654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 9783165 - 9783058
Alignment:
Q  55 gatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggttt 153  Q
    |||||| || |||||| ||  |||||| ||||||||| ||||||||| ||||  |||||||| ||||| |||||||| ||| ||||||||||||| ||||    
T  9783165 gatgacagagcatcatatgacattttgcctatgtttttagtactttttctttacatttgaaggcaaatgagatgagagttagaggagttgtcaatagttt 9783066  T
Q  154 gaggaaca 161  Q
    ||||||||    
T  9783065 gaggaaca 9783058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 1696726 - 1696652
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggttt 153  Q
    |||||||||| |||  ||||||||| |||  |||||||||||||||||||||||  |||||||||||||||||||||    
T  1696726 ttttggctatattt--agtacttttatttacatttgaagacaaataagatgagagatataggagttgtcaatggttt 1696652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 22119586 - 22119687
Alignment:
Q  62 gaacatcatgtgttattttg-gctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaac 160  Q
    ||||||||| || ||||||  |||||||||| |||  ||||||||| |||||||| ||||| ||| |  | |||||||||||||||||||||||||||||    
T  22119586 gaacatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaattagaagttatttataggagttgtcaatggtttgaggaac 22119685  T
Q  161 aa 162  Q
    ||    
T  22119686 aa 22119687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 18897947 - 18898031
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||| |||||| | |||||||||||| ||||||||||||||||| |||||  || | || ||||||||||||| |||||||    
T  18897947 ttttggctgtgtttttactacttttctttgcatttgaagacaaataagttgagagatagatgatttgtcaatggtttaaggaaca 18898031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 23353730 - 23353815
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaat 253  Q
    |||||||| |||| ||||| |||||||||| |||||  ||| ||||||||||||||||||| ||| |||||||||||| |||||||||    
T  23353730 ttttgagt-ctttttagtgagaaatcatgtaaatcggcaaaacaagacatcacatgaagga-caaggatatgaagattaaagatcaat 23353815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 25050224 - 25050141
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaac 160  Q
    ||||||||||||||| |||| |||| |||| ||||||||||||||||||||| | ||| || | || |||| ||||||||||||    
T  25050224 ttttggctatgtttttagtatttttatttgtatttgaagacaaataagatgaaagttagagaaattatcaacggtttgaggaac 25050141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 29437598 - 29437673
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctta 261  Q
    |||||||||| |||||  ||  ||||||||||| ||||||||| | |||||||||||||||| |||||||||||||    
T  29437598 gaaatcatgtaaatcggcaagacaagacatcacgtgaaggatcgaggatatgaagattgaagttcaatggttctta 29437673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 26159905 - 26159971
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaa 274  Q
    ||||||||||  ||||||||  | |||||||||||||||||||||||||||||| ||||| ||||||    
T  26159905 caagacatcatgtgaaggattcaggatatgaagattgaagatcaatggttcttataaggtctttgaa 26159971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 27302907 - 27302996
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagaca 278  Q
    |||||||| |||||| |||| |||||||||| || | |||||| |||||||| |||||| || || |||||||| ||||||||||||||||    
T  27302907 aatcatgtaaatcgacaaattaagacatcacgtgcaagatcaaggatatgaa-attgaacattaagggttcttagaaggtttttgaagaca 27302996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 282
Target Start/End: Original strand, 51884756 - 51884825
Alignment:
Q  212 acatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||| ||| || ||||| |||||||    
T  51884756 acatcacatgaaggatcaaagatatgaa-attgaagatcaagggctcttagaagattgttgaatacaatac 51884825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 22119782 - 22119843
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||||| || |||||||| ||||||||||||||||||||| | ||||||||| |||||||    
T  22119782 tgaaggattaaggatatgaatattgaagatcaatggttcttagagggtttttgaggacaata 22119843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 4953654 - 4953722
Alignment:
Q  93 agtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| ||||||||| ||||||||| |||||||||| ||  || ||||||||| ||||||||||||||||    
T  4953654 agtatttttctttgtatttgaagagaaataagatgtgagataaaggagttgttaatggtttgaggaaca 4953722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 9782986 - 9782889
Alignment:
Q  170 gagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaaggtt 268  Q
    ||||| ||||||||| | |||||||| |||| | ||||||||||||||  || ||||||||||  |||||| |||||||||||| |||||||| ||||||    
T  9782986 gagtgttttgtagtgaggaatcatgtaaatcaacaaatcaagacatcatgtggaggatcaaag--atgaagaattgaagatcaagggttcttagaaggtt 9782889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 32021954 - 32022016
Alignment:
Q  219 atgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||  ||||||||| ||||||||||||||||  |||||| |||||||||||||||    
T  32021954 atgaaggatcaagtatatgaagaatgaagatcaatggttccaaaaagg-ttttgaagacaatac 32022016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 15192166 - 15192212
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgaga 130  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||    
T  15192166 tatgtttttcgtacttttctttgcatttgaagacaaataagatgaga 15192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 18444373 - 18444451
Alignment:
Q  182 gtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    ||||||| |||||| ||||   ||| ||||||||||| ||||||||| | ||||  |||||||||||||||||||||||    
T  18444373 gtgggaagtcatgtaaatctgcaaaacaagacatcacgtgaaggatcgatgatacaaagattgaagatcaatggttctt 18444451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 1695817 - 1695738
Alignment:
Q  202 aaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||||  |||| |||||| ||||||||||||||| || ||   |||||| |||||| |||||||||||||    
T  1695817 aaaaatcaagacatcatgtgaatgatcaacgatatgaagattgaa-ataaaacattcttagaaggttgttgaagacaatac 1695738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 5125581 - 5125629
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtca 146  Q
    |||| |||| ||||||||||||||||||||||||||| |||| ||||||    
T  5125581 ttttttttgcatttgaagacaaataagatgagaattagaggaattgtca 5125629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 275
Target Start/End: Original strand, 10576569 - 10576669
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaa 274  Q
    |||| ||||| ||||| |||| ||||| |||| ||||||||||  ||||||||| | |||||||||| | |||| | ||| || ||| ||||||||||||    
T  10576569 ctttctagtgagaaattatgtaaatcggaaaaacaagacatcatgtgaaggatcgaggatatgaagaataaagaactatgatttttagaaggtttttgaa 10576668  T
Q  275 g 275  Q
    |    
T  10576669 g 10576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 17187301 - 17187396
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||| |||||| |||  || ||||||  |||| |||  | |||||||||||||||| ||| ||||||||| ||| | ||||||||||||||    
T  17187301 aaatcatgtaaatcgacaaaataacacatcaagtgaatgattgaggatatgaagattgaagttcagtggttcttagaagttatttgaagacaatac 17187396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 27302755 - 27302818
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||| ||| ||||||||||||||| ||||| |  || || |||||||||||||||||||||||    
T  27302755 ttttcgttgcatttgaagacaaatatgatgatagatagagaagttgtcaatggtttgaggaaca 27302818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 10320216 - 10320112
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    ||||||||| ||||||| || ||| || |||||| ||||| |||||||||||||| ||| |||| ||||||| | ||||||| ||| ||||| || |||     
T  10320216 tttgtagtgagaaatcaggtaaattgacaaatca-gacataacatgaaggatcaaggatgtgaaaattgaag-ttaatggttgttagaaggtcttcgaaa 10320119  T
Q  276 acaatac 282  Q
    |||||||    
T  10320118 acaatac 10320112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 31860039 - 31859955
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||| |||  |||| |||| ||||||||| |||||| | |  | ||| || |||||||||| ||||||||||||    
T  31860039 ttttggctatgtttttagttattttttttgcatttgaagaaaaataaaaggttatttagagaagttgtcaattgtttgaggaaca 31859955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 19219218 - 19219102
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| | |||||||| ||||   ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  19219218 ttttgagtgttttgtagtgaggaatcatgtaaatcttcaaaccaagacatcacatgaaggatcaaggatatgaagattgaagatcaatggttcttagaag 19219119  T
Q  266 gtttttgaagacaatac 282  Q
    |||||||||||||||||    
T  19219118 gtttttgaagacaatac 19219102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 16970573 - 16970685
Alignment:
Q  170 gagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggttt 269  Q
    ||||| |||||||| || |||||||| |||||| ||||||||||||||  ||||||||||| ||||||||| ||||||| ||| |||||||| |||||||    
T  16970573 gagtgttttgtagtagggaatcatgtaaatcgacaaatcaagacatcatgtgaaggatcaaggatatgaagtttgaagaccaacggttcttagaaggttt 16970672  T
Q  270 ttgaagacaatac 282  Q
    ||||||| |||||    
T  16970673 ttgaagaaaatac 16970685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 33914715 - 33914637
Alignment:
Q  83 ctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  33914715 ctatgtttttagtacttttctttgcatttcaagacaaataagatgagagttataggagttgtcaacggtttgaggaaca 33914637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 11474954 - 11475070
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||  ||| ||||| |||||||||| |||||  ||| ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||| |||    
T  11474954 ttttgagtcttttttagtgagaaatcatgtaaatcggcaaaacaagacatcacatgaaggatcgaagatatgaggattcaagataaatggttcttagaag 11475053  T
Q  266 gtttttgaagacaatac 282  Q
     | ||||||||||||||    
T  11475054 atatttgaagacaatac 11475070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 19263909 - 19263809
Alignment:
Q  171 agtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttt 270  Q
    |||| ||||||||  | |||||||  |||||  |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  19263909 agtgttttgtagtaaggaatcatggaaatcgtcaaatcaagtcatcacatgaaggatcaaggatatgaagattgaagatcaatggttcatagaaggtttt 19263810  T
Q  271 t 271  Q
    |    
T  19263809 t 19263809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 25919647 - 25919539
Alignment:
Q  54 tgatgacggaacatcatgtgttattt-tggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    |||||| ||| |||||| || ||||| ||| |||||||| ||||| |||||||| ||||||||||||||||||||||| ||| | || ||||||||||||    
T  25919647 tgatgatggagcatcatatgatatttctggttatgtttttagtacatttctttgaatttgaagacaaataagatgagagttagatgatttgtcaatggtt 25919548  T
Q  153 tgaggaaca 161  Q
    |||||||||    
T  25919547 tgaggaaca 25919539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 282
Target Start/End: Original strand, 26418836 - 26418943
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaa 274  Q
    |||| ||||| |||||||||| ||||| ||||  |||||||| ||||||||||||| |||||||||||| |||||  |||||||||| ||||||||| ||    
T  26418836 ctttttagtgagaaatcatgtaaatcggaaaaataagacatcgcatgaaggatcaaggatatgaagattaaagattgatggttcttagaaggtttttaaa 26418935  T
Q  275 gacaatac 282  Q
    || |||||    
T  26418936 gaaaatac 26418943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 21829098 - 21829025
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||| |  ||||| |||||||||||||    
T  21829098 caagacatcacatgaagtatcaaggatatgaagattgaagatcaatggttcatcgaaggtctttgaagacaata 21829025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 159
Target Start/End: Complemental strand, 1475441 - 1475357
Alignment:
Q  76 attttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    |||||||||||||||| ||||||||| ||||| |||||||| | |||||||||||| ||| ||||||| ||||||||||||||||    
T  1475441 attttggctatgtttttagtactttttctttgcatttgaagtctaataagatgagagttagaggagttttcaatggtttgaggaa 1475357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 23908258 - 23908162
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| || ||  ||| ||||||||| |||||||||||||  ||||||||||| ||||||||||||| ||| || |||||||||||||||||    
T  23908258 gaaatcatgtaaagcggcaaagcaagacatctcatgaaggatcaagaatatgaagatttaagatcaatggtttttagaaagtttttgaagacaatac 23908162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 25919468 - 25919392
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaa 252  Q
    ||||||||| | |||||||| |||||| ||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  25919468 tttgtagtgaggaatcatgtaaatcgacaaaccaagatatcacatgaaggatcaaggatatgaagattgaagatcaa 25919392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 33914574 - 33914494
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaa 246  Q
    ||||||||| ||||||||| |||||||||| ||||||  |||||||||||||| ||||||||||| ||||||||| |||||    
T  33914574 ttttgagtgttttgtagtgagaaatcatgtaaatcgacgaatcaagacatcacgtgaaggatcaaggatatgaaggttgaa 33914494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 10341904 - 10342010
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    ||||| ||| |||||||||| |||| | ||||| | ||||||  |||||||| || ||||  |||||||||||||| ||||||||| |||||||||||||    
T  10341904 tttgttgtgagaaatcatgtaaatcaacaaatccaaacatcaagtgaaggattaaggatagaaagattgaagatcagtggttcttagaaggtttttgaag 10342003  T
Q  276 acaatac 282  Q
    |||||||    
T  10342004 acaatac 10342010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 19219395 - 19219289
Alignment:
Q  53 ttgatgacggaacatcatgtgtta-ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggt 151  Q
    ||||||||| | |||||| || || |||| ||| |||||| |||| |||||||||  |||||||| ||||||||||||| |||| |||||||||||||||    
T  19219395 ttgatgacgaagcatcatatgatacttttagctgtgtttttagtatttttctttgcttttgaagataaataagatgagagttattggagttgtcaatggt 19219296  T
Q  152 ttgagga 158  Q
    |||||||    
T  19219295 ttgagga 19219289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 12573244 - 12573328
Alignment:
Q  76 attttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    ||||||| |||||||| ||||||||| ||||| ||| ||||||||||||||||||| ||| | || |||||||||||||||||||    
T  12573244 attttggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttagatgatttgtcaatggtttgaggaa 12573328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 13549708 - 13549792
Alignment:
Q  76 attttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    ||||||| |||||||| ||||||||| ||||| ||| ||||||||||||||||||| ||| | || |||||||||||||||||||    
T  13549708 attttggttatgtttttagtactttttctttgcattagaagacaaataagatgagagttagatgatttgtcaatggtttgaggaa 13549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 28422560 - 28422675
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||| || ||||||||| ||||||||||  ||||| ||||||| ||||||| ||||||||  | |||||||||||||||| ||||| | | ||| |||    
T  28422560 ttttgaatgttttgtagtgagaaatcatgtagatcgacaaatcaatacatcacgtgaaggattgaggatatgaagattgaagttcaat-gatgttagaag 28422658  T
Q  266 gtttttgaagacaatac 282  Q
    || ||||||||||||||    
T  28422659 gtatttgaagacaatac 28422675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 25188906 - 25188981
Alignment:
Q  208 caagacatcacatgaaggatcaaaga-tatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||| |||||||||| || |||||||| |||| ||||||||||||||| |||||||| ||||||||||    
T  25188906 caagacatcacaagaaggatcaaggaatatgaagaatgaatatcaatggttcttaagaggttttttaagacaatac 25188981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 18474292 - 18474393
Alignment:
Q  181 agtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaat 280  Q
    |||| |||||||||| |||||  ||  |||||||| |||||||||||| ||||| | |||||||||  |||||||| |||| ||||| ||||||||||||    
T  18474292 agtgagaaatcatgtaaatcgggaacacaagacattacatgaaggatcgaagatgtaaagattgaatttcaatggtacttagaaggtatttgaagacaat 18474391  T
Q  281 ac 282  Q
    ||    
T  18474392 ac 18474393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 21017840 - 21017917
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||| |||| ||||||||| ||||||||| ||||||||||||| ||| |||||||| ||||  |||||||||||    
T  21017840 tatgtttttagtatttttctttgcatttgaagaaaaataagatgagagttagaggagttggcaataatttgaggaaca 21017917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 19543111 - 19543015
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||||  ||  ||||||||||||||||||||| |  || | |||||||||  ||||| ||||||| ||||| ||||||||||||||    
T  19543111 gaaatcatgttaatcgggaacacaagacatcacatgaaggatcgagaatgtaaagattgaatttcaatagttcttagaaggtatttgaagacaatac 19543015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 21017985 - 21018100
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| |||||| || |||||||||| | || | |||||||||||| || ||||||||||| |||||||| |||||||| ||||||||  || ||     
T  21017985 ttttgagtgttttgtattgagaaatcatgtaattcaacaaatcaagacattacgtgaaggatcaatgatatgaa-attgaagaccaatggtttctataac 21018083  T
Q  266 gtttttgaagacaatac 282  Q
     |||||||||| |||||    
T  21018084 ttttttgaagataatac 21018100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 10341763 - 10341836
Alignment:
Q  88 ttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaa 162  Q
    |||| ||||||||||| || |||||||  ||||||||||| |||||| ||||||||||||||| |||||||||||    
T  10341763 tttttagtacttttctctgcatttgaaatcaaataagatgtgaattagaggagttgtcaatgg-ttgaggaacaa 10341836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 13911227 - 13911305
Alignment:
Q  83 ctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||| |||| ||||||||| |||||||||||| ||||  ||||  || | ||||||||||||||||||||||||    
T  13911227 ctatgtttttagtaattttctttgtatttgaagacaagtaagtagagagatagaagagttgtcaatggtttgaggaaca 13911305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 281
Target Start/End: Complemental strand, 5632539 - 5632435
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    ||||||||| |||||||||| |||||| ||| |||||||||||||| || ||  |  |||| ||||||||||| ||| |||||||| ||||| |||||||    
T  5632539 tttgtagtgagaaatcatgtaaatcgacaaaccaagacatcacatggagaattgataatataaagattgaaga-caacggttcttataaggtatttgaag 5632441  T
Q  276 acaata 281  Q
    | ||||    
T  5632440 ataata 5632435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 10303427 - 10303504
Alignment:
Q  88 ttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaagta 165  Q
    |||| ||||||||||| |  |||||||  ||||||||||| |||||| ||||||||||||||||||||| || |||||    
T  10303427 tttttagtacttttctctacatttgaaatcaaataagatgtgaattagaggagttgtcaatggtttgagaaaaaagta 10303504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 8402684 - 8402624
Alignment:
Q  102 ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaa 162  Q
    ||||| |||||||| |||||||||||  | ||| |||||||||||||||||||||||||||    
T  8402684 ctttgcatttgaaggcaaataagatgtaatttagaggagttgtcaatggtttgaggaacaa 8402624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 26387810 - 26387758
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    ||||||||||  |||||||||||||||||||| ||||||||| ||||||||||    
T  26387810 caagacatcaagtgaaggatcaaagatatgaatattgaagattaatggttctt 26387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 27415276 - 27415387
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||  |||||||||| ||| ||  |||||||||||||||| ||||||||| |||| | | |||||||| || | ||||||| ||     
T  27415276 ttttgagtgttttgtagtaagaaatcatgtaaatagaccaatcaagacatcacataaaggatcaaggataagga-attgaagaccattagttcttagaat 27415374  T
Q  266 gtttttgaagaca 278  Q
    ||||||| |||||    
T  27415375 gtttttggagaca 27415387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 11521117 - 11521180
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||| ||| ||||||||| ||||||||||||  ||  ||||||||||||||||||||||||||    
T  11521117 ttttcattgcatttgaagaaaaataagatgagcgttggaggagttgtcaatggtttgaggaaca 11521180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 18065914 - 18066020
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctta-aaaggtttttgaa 274  Q
    ||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||| || | | | ||| |||| |||||||||||| |||| ||||||||    
T  18065914 tttgtagtaagaaatcatgtaaatagacaaatcaagacatcacataaaggatcaatgacaagga-attaaagaccaatggttcttagaaagttttttgaa 18066012  T
Q  275 gacaatac 282  Q
    || |||||    
T  18066013 gaaaatac 18066020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 281
Target Start/End: Complemental strand, 8402537 - 8402443
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt-aaaaggtttttgaagacaata 281  Q
    |||| ||| |||||| | ||||||||||||  ||||||||| | ||||||||||||||||| | |||||||||  |||||| |||||||| ||||    
T  8402537 aatcgtgtaaatcgatagatcaagacatcaagtgaaggatcgaggatatgaagattgaagaactatggttcttcgaaaggtatttgaagaaaata 8402443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 25883033 - 25883143
Alignment:
Q  52 attgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatgg 150  Q
    ||||||||| || |||||| || || ||||||||| |||  ||||||||| | ||| ||||||||| ||||||||||||| | | | |||||||||||      
T  25883033 attgatgacagagcatcatatgatactttggctatatttctagtactttttcattgcatttgaagaaaaataagatgagagtcagaagagttgtcaattt 25883132  T
Q  151 tttgaggaaca 161  Q
    |||||||||||    
T  25883133 tttgaggaaca 25883143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 17637034 - 17637131
Alignment:
Q  53 ttgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatg 149  Q
    ||||||||||| |||||| ||  ||||| ||||||||||  | |||||||||||| | || |||||||||||||| ||||| | ||||||||| ||||    
T  17637034 ttgatgacggagcatcatatgacatttttggctatgtttatattacttttctttgtaattaaagacaaataagataagaataagaggagttgtaaatg 17637131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 2729733 - 2729693
Alignment:
Q  121 taagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  2729733 taagatgagaattataggagttgtcaatggttcaaggaaca 2729693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 271
Target Start/End: Complemental strand, 2729625 - 2729527
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| |||||||||  ||||| ||| ||||||||||| ||||||||||        |||| |||||||| |||||||||||| |  |||||||||    
T  2729625 ttttgagtgttttgtagtgataaatcttgtaaatcgaaaaattaagacatcac-------gtcaaggatatgaatattgaagatcaacgactcttaaaag 2729533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 13911403 - 13911480
Alignment:
Q  204 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||||  |||||||||||| |||||||||||| ||  | ||||||||||| |||  |||| ||||||||||    
T  13911403 aaatcaagacatcttatgaaggatcaaggatatgaagatt-aaattaaatggttcttagaagaattttcaagacaatac 13911480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 25883211 - 25883326
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaa 264  Q
    ||||||||| ||| ||||| | ||||||||  |||   |||||||||||||   | ||||||||| |||  ||||| ||||||||||| |||||||| ||    
T  25883211 ttttgagtgttttatagtgaggaatcatgtacatcatcaaatcaagacatcttgttaaggatcaaggat--gaagaattgaagatcaagggttcttagaa 25883308  T
Q  265 ggtttttgaagacaatac 282  Q
    |||| |||||||||||||    
T  25883309 ggttgttgaagacaatac 25883326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 12409413 - 12409498
Alignment:
Q  76 attttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||| |||| |||| ||||||||| |||| ||||||||| ||||||  || ||  || | |||||||||||||||||| |||||    
T  12409413 attttgactatatttttagtacttttatttgtatttgaagaaaaataacttgggagataaaagagttgtcaatggtttgaagaaca 12409498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 25188691 - 25188796
Alignment:
Q  55 gatgacggaacatcatgtgttattttggctatgttttaagt-acttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggttt 153  Q
    ||||||||| |||||| || ||||| |||||| |||| | | | ||||||||| |||||||||||||||||| |  | ||| |||| ||| |||||||||    
T  25188691 gatgacggatcatcatatgatatttaggctatatttttacttatttttctttgcatttgaagacaaataagaggtcatttagaggaattgacaatggttt 25188790  T
Q  154 gaggaa 159  Q
    | ||||    
T  25188791 gtggaa 25188796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 1475248 - 1475171
Alignment:
Q  204 aaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||  ||||||||||| |||  ||||| |||||||||||  ||||||| |||||| ||||||| |||||    
T  1475248 aaatcaagacatcatgtgaaggatcaaggat--gaagagttgaagatcaagagttcttagaaggttattgaagataatac 1475171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 69; Significance: 6e-31; HSPs: 3)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 21505 - 21621
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||| ||| |||| |||| | |||||||| |||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||    
T  21505 ttttgggtgttttgcagtgaggaatcatgtaaatcgacaaaccaagacattacatgaaggatcaatgatatgaagattgaagatcaatggttcttagaag 21604  T
Q  266 gtttttgaagacaatac 282  Q
    |||||| ||||||||||    
T  21605 gtttttaaagacaatac 21621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 6152 - 6236
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||| |||||||||||||  |||| || ||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  6152 ttttggctatgtttttagtacttttctttccatttaaacacaaataagatgagagttatatgagttttcaatggtttgaggaaca 6236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 6324 - 6418
Alignment:
Q  187 aaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| || ||| |||||||||| |||||    
T  6324 aaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcaaggatatgaa-attgaagaccaatggttcctagaagatttttgaagaaaatac 6418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 16052284 - 16052168
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| |||||||| | |||| | |||||||||||||||||||||||| || |||||||||||| |||| ||||| |||||| |||    
T  16052284 ttttgagtgttttgtagtgagaaatcatctaaatcaacaaatcaagacatcacatgaaggataaaggatatgaagattaaagaccaatgattcttagaag 16052185  T
Q  266 gtttttgaagacaatac 282  Q
    |||||||||||||||||    
T  16052184 gtttttgaagacaatac 16052168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 159
Target Start/End: Original strand, 12956432 - 12956527
Alignment:
Q  65 catcatgtgttattttgg-ctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    ||||||||| |||||| | ||||||||| |||||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  12956432 catcatgtgatatttttgtctatgtttttagtacttttctttgcatttgaagataaataagatgagagttagaggagttgtcaatggtttgaggaa 12956527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 32239395 - 32239510
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| |||||| ||| ||| || ||||| |||||||||||||||||| || |||||||||||||||| ||||||||| ||| |||    
T  32239395 ttttgagtgttttgtagtgagaaatcgtgtaaattgacaaatcgagacatcacatgaaggataaaggatatgaagattgaagttcaatggtttttataag 32239494  T
Q  266 gtttttgaagacaata 281  Q
    ||| || |||||||||    
T  32239495 gttcttaaagacaata 32239510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 24696709 - 24696805
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| |||| | ||||||||||||||||| ||||||||| ||||||||||||||||| || | ||||||| |||||||||||||| |||||    
T  24696709 gaaatcatgtaaatcaacaaatcaagacatcacataaaggatcaaggatatgaagattgaagaccacttgttcttagaaggtttttgaagaaaatac 24696805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 281
Target Start/End: Complemental strand, 28859246 - 28859131
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||| | ||||||||  |||||||||| ||| || ||| | | ||||||||||||||||||| ||||| |||||| ||||||||||||||||| | |    
T  28859246 ttttgagggttttgtagtaagaaatcatgtaaatggacaaacctaaacatcacatgaaggatcaaggatatcaagattaaagatcaatggttcttagatg 28859147  T
Q  266 gtttttgaagacaata 281  Q
    ||||||||||||||||    
T  28859146 gtttttgaagacaata 28859131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 14977260 - 14977182
Alignment:
Q  83 ctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||| || ||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  14977260 ctatgtttttagcacttttctttgcattttaagacaaataagatgagagttagaggagttgtcaatggtttgaggaaca 14977182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 16052460 - 16052358
Alignment:
Q  54 tgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    |||||||||| |||||| || |||||| ||||||||||| ||||||||| |||| |||||| ||||||||| |||||| ||| |||||||||||||||||    
T  16052460 tgatgacggagcatcatatgatatttttggctatgtttttagtacttttatttgcatttgaggacaaataaaatgagagttagaggagttgtcaatggtt 16052361  T
Q  153 tga 155  Q
    |||    
T  16052360 tga 16052358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 24120187 - 24120269
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    |||| |||||||||| |||||||||||||| ||||||||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  24120187 tttttgctatgtttttagtacttttctttgcatttgaagagaaataagatgagagttagaggagttgtcaacggtttgaggaa 24120269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 13583518 - 13583411
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaa 274  Q
    |||| ||||| |||||||||| |||||| ||| ||||||||||  ||||||||| | ||||||| |||||||| ||||||||||||| ||| | ||||||    
T  13583518 ctttttagtgagaaatcatgtaaatcgacaaaacaagacatcaagtgaaggatcgaggatatgatgattgaagttcaatggttcttagaagatatttgaa 13583419  T
Q  275 gacaatac 282  Q
    ||||||||    
T  13583418 gacaatac 13583411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 22894540 - 22894423
Alignment:
Q  163 gtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaa 262  Q
    ||||||| |||| | | ||||| |||||||||| ||||||||| |||||| ||||||||||||||||| ||||| |||||||||  ||||| |||||||     
T  22894540 gtatttttagtgttctatagtgagaaatcatgtaaatcgaaaa-tcaagatatcacatgaaggatcaatgatataaagattgaa-ttcaattgttcttag 22894443  T
Q  263 aaggtttttgaagacaatac 282  Q
    | ||||||||||||||||||    
T  22894442 atggtttttgaagacaatac 22894423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 28292086 - 28291992
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||| |||||  |||  |||||||||||||||||||  | |||||||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  28292086 aatcatgtaaatcgccaaaataagacatcacatgaaggattgaggatatgaagattgaagattaatggttcttagaaggtctttgaagacaatac 28291992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 28901346 - 28901241
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    |||||||||  |||| ||||  ||||| |||||||||||||| |||||| ||||| |||||||||||||||  ||||||||||||| ||||||| |||||    
T  28901346 tttgtagtgataaataatgtacatcgacaaatcaagacatcatatgaagaatcaatgatatgaagattgaa-ttcaatggttcttataaggtttctgaag 28901248  T
Q  276 acaatac 282  Q
    |||||||    
T  28901247 acaatac 28901241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 29291873 - 29291990
Alignment:
Q  161 aagtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    ||||||||||||| |||| ||||  |||||||||| |||||  ||| ||||| ||||| ||||| ||| | |||||||| ||||||||||||||||||||    
T  29291873 aagtattttgagt-ctttttagtaagaaatcatgtaaatcggcaaaacaagatatcacgtgaagaatcgaggatatgaatattgaagatcaatggttctt 29291971  T
Q  261 aaaaggtttttgaagacaa 279  Q
    | ||||| |||||||||||    
T  29291972 agaaggtctttgaagacaa 29291990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 28902192 - 28902312
Alignment:
Q  161 aagtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    |||| |||| |||| || |||||| |||||||||| |||| | ||||| ||||||||| ||||||||||| ||||| || ||| |||| |||||||||||    
T  28902192 aagtgtttttagtgtttagtagtgagaaatcatgtaaatcaacaaatcgagacatcacgtgaaggatcaatgatattaa-attaaagaccaatggttctt 28902290  T
Q  261 aaaaggtttttgaagacaatac 282  Q
    | |||||| |||||||||||||    
T  28902291 agaaggttattgaagacaatac 28902312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 13082120 - 13082012
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    |||||||  |||||||| ||  ||||||  |||||||| ||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||| ||    
T  13082120 tgatgacaaaacatcatatgacattttgattatgtttttagtactttttctttgcatttgaagacaaataagatgagagttagaggagttgtcaatgatt 13082021  T
Q  153 tgaggaaca 161  Q
    |||| ||||    
T  13082020 tgagaaaca 13082012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 16054226 - 16054334
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    ||||||| || |||||| ||  ||||||||||||| || ||||||||| ||||| ||||||||||||||||||| ||| ||| |||||||||||||| ||    
T  16054226 tgatgacagagcatcatatgacattttggctatgtctttagtactttttctttgcatttgaagacaaataagataagagttagaggagttgtcaatgatt 16054325  T
Q  153 tgaggaaca 161  Q
    | |||||||    
T  16054326 taaggaaca 16054334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 28901499 - 28901415
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||| ||| | |||||||||||| ||||||| ||||||||| |||||  || ||||||||||||||||||||||||||    
T  28901499 ttttggctatgcttttaatacttttctttgcatttgaatacaaataagttgagagatagaggagttgtcaatggtttgaggaaca 28901415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 6888186 - 6888084
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| |||| | ||| |||  |||||| || || ||| | ||||||||||||||||||||||||||||||||| || |||||||||||    
T  6888186 tagtgagaaatcatgtaaatcaacaaaacaaaccatcacgtgcagtatcgaggatatgaagattgaagatcaatggttcttaaaatgtctttgaagacaa 6888087  T
Q  280 tac 282  Q
    |||    
T  6888086 tac 6888084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 11437524 - 11437643
Alignment:
Q  163 gtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaa-ggatcaaagatatgaagattgaagatcaatggttctta 261  Q
    ||||||||||| |||| ||||| |||||||||| |||||  ||| ||||||||||  |||| ||||||| |||||||| ||||||| |||||||||||||    
T  11437524 gtattttgagt-ctttttagtgagaaatcatgtaaatcggcaaaacaagacatcaagtgaaaggatcaaggatatgaaaattgaagttcaatggttctta 11437622  T
Q  262 aaaggtttttgaagacaatac 282  Q
     |||   ||||||||||||||    
T  11437623 gaagacatttgaagacaatac 11437643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 32239243 - 32239327
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||||||| || ||||||||||  ||||||||| | ||||||| | ||||| ||||||||||||||||||||| ||||    
T  32239243 ttttggctatgtttttagcacttttctttacatttgaagatagataagataataattagaggagttgtcaatggtttgagtaaca 32239327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 11310224 - 11310147
Alignment:
Q  204 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||  ||||||||||| |||||||||||| ||| |||||| |||||| |||||||||||| |||||||    
T  11310224 aaatcaagacatcatgtgaaggatcaaggatatgaagatttaag-tcaatgattcttagaaggtttttgaaaacaatac 11310147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 29047499 - 29047401
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggt 151  Q
    ||||||| || |||||| || || ||||||||| || | ||||||||| ||||| ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  29047499 tgatgacagagcatcatatgataatttggctatattattagtactttttctttgcatttgaaaacaaataagatgagagttagaggagttgtcaatggt 29047401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 280
Target Start/End: Complemental strand, 14424806 - 14424706
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| |||||  ||| ||||||| ||   |||||||  | |||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  14424806 tagtgagaaatcatgtaaatcggcaaaacaagacaacaagggaaggatatatgataagaagattgaagatcaatggttcttagaaggtttttgaacacaa 14424707  T
Q  280 t 280  Q
    |    
T  14424706 t 14424706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 30543888 - 30543984
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttc-ttaaaaggtttttgaagacaata 281  Q
    |||||||||| |||||  ||| ||||| ||||||||||||||  | |||||||||||||||| |||||||||| ||||||| | ||| |||||||||    
T  30543888 gaaatcatgtaaatcggtaaaacaagatatcacatgaaggattgaggatatgaagattgaagttcaatggttctttaaaagatatttaaagacaata 30543984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 281
Target Start/End: Original strand, 5153885 - 5153980
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||||||| ||| |  ||| |||||||| |  ||||||||| | ||||||||||||||||||||||| || ||  |||||||||||||||||||    
T  5153885 gaaatcatgtaaataggcaaaacaagacataaagtgaaggatcgaggatatgaagattgaagatcaatgattattggaaggtttttgaagacaata 5153980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 14977108 - 14977003
Alignment:
Q  176 tttgtagtgggaaa--tcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttga 273  Q
    |||||||||||| |  |||||| ||| || |||||||||||||||||||| |||||| || |||||||||||| ||||||| || ||   ||||||||||    
T  14977108 tttgtagtgggagaagtcatgtaaattgacaaatcaagacatcacatgaaagatcaaggacatgaagattgaaaatcaatgattttt---aggtttttga 14977012  T
Q  274 agacaatac 282  Q
    ||| |||||    
T  14977011 agataatac 14977003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 12956610 - 12956704
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||| | |||||| ||| ||||| ||||||||||| ||||| |||||||||| ||||||||||| ||| ||  ||||||||| |||| |||||    
T  12956610 aatcatataaatcgataaaccaagatatcacatgaagaatcaaggatatgaagactgaagatcaattgtttttggaaggttttttaagataatac 12956704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 6358658 - 6358731
Alignment:
Q  81 ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttg 154  Q
    ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||  || ||||||||| |||||||||    
T  6358658 ggctatgtttttagtacttttatttgcatttgaagacatataagttgagagatagaggagttgttaatggtttg 6358731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 28074629 - 28074724
Alignment:
Q  175 ctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttt 270  Q
    |||| ||||| |||||||||| |||    ||| |||||||||| |||||||||||| |||||||||| ||||||||| |||| ||||  |||||||    
T  28074629 ctttttagtgagaaatcatgtaaatatgcaaaacaagacatcaaatgaaggatcaaggatatgaagaatgaagatcagtggtccttacgaggtttt 28074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 30851053 - 30850999
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaa 274  Q
    ||||||||||| ||||||||||||||||||||| |||||||| || || ||||||    
T  30851053 tgaaggatcaaggatatgaagattgaagatcaacggttcttagaatgtctttgaa 30850999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 24584734 - 24584650
Alignment:
Q  163 gtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaaga 248  Q
    |||||||||||  ||||||||| |||||| ||| ||| || || ||||||||||||||||| |||||  |||||||| ||||||||    
T  24584734 gtattttgagttttttgtagtgagaaatcttgtaaattgacaa-tcaagacatcacatgaaagatcatggatatgaaaattgaaga 24584650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 28260296 - 28260180
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaa 264  Q
    |||||||| |||| ||||| |||||||||| ||||   ||| ||||||||||| || ||||||||  |||| ||  ||||||||||||| ||||||| ||    
T  28260296 ttttgagt-ctttttagtgagaaatcatgtaaatcagcaaaacaagacatcacgtggaggatcaagtatatcaaatattgaagatcaatagttcttataa 28260198  T
Q  265 ggtttttgaagacaatac 282  Q
     ||||||||||| |||||    
T  28260197 agtttttgaagataatac 28260180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 26882365 - 26882445
Alignment:
Q  79 ttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgagga 158  Q
    ||||||||||||| ||||||||| ||| | | | |||||||||||| |||||| ||| |||||||| ||||||||| ||||    
T  26882365 ttggctatgtttttagtactttttcttcgcaatcgaagacaaataaaatgagatttaaaggagttgccaatggtttaagga 26882445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 5570279 - 5570216
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| |||| ||||||||| ||||||||||||| ||  |||||||||||||  |||||||||||    
T  5570279 ttttttttgcatttgaagaaaaataagatgagatttgaaggagttgtcaatactttgaggaaca 5570216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 27097793 - 27097693
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| |||||  ||| ||||||||||| ||| ||||  |  |||||||||||||  || ||| ||||||| ||||| |||||||||||    
T  27097793 tagtgagaaatcatgtaaatcggcaaaacaagacatcacgtgatggattgatcatatgaagattga--atgaatagttcttagaaggtctttgaagacaa 27097696  T
Q  280 tac 282  Q
    |||    
T  27097695 tac 27097693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13081887 - 13081826
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||||   | |||||||||||| |||||||| |||||| |||||||||||||    
T  13081887 tgaaggatcaaagataaata-attgaagatcaagggttcttagaaggttgttgaagacaatac 13081826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 16054402 - 16054517
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagat-atgaagattgaagatcaatggttcttaaaa 264  Q
    |||||| || ||||||||| | |||||||| ||||   || |||||||||||  ||||||||||| | | ||||  |||||||||||| |||||||| ||    
T  16054402 ttttgattgttttgtagtgaggaatcatgtaaatcattaattcaagacatcatgtgaaggatcaaggttgatga--attgaagatcaagggttcttagaa 16054499  T
Q  265 ggtttttgaagacaatac 282  Q
    |||| ||||||| |||||    
T  16054500 ggttgttgaagaaaatac 16054517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 281
Target Start/End: Complemental strand, 12774830 - 12774737
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagata-tgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    ||||| |||| ||||| |||| |||| |||||| || | ||||||||||| | |||||||||||||||||| ||||||||  | |||||||||||||    
T  12774830 gaaataatgtaaatcggaaaaacaagtcatcacgtggaagatcaaagataatcaagattgaagatcaatgg-tcttaaaa--tatttgaagacaata 12774737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 24120353 - 24120446
Alignment:
Q  188 aatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||||  ||||||  |||||||||||||  ||||||||||| ||||| ||  ||||| | ||||| |||||| |||||||| ||||| ||||    
T  24120353 aatcatgcaaatcgaccaatcaagacatcatgtgaaggatcaaggatattaattttgaataccaatgtttcttagaaggttttcgaagataata 24120446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 13530260 - 13530180
Alignment:
Q  81 ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||| |||  | ||||||| | |||||||||||||||| |  | ||| ||||| |||| |||||||||||||||    
T  13530260 ggctatgtttttagttatattctttgcaattgaagacaaataagaggtcatttagaggagatgtcgatggtttgaggaaca 13530180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 13619799 - 13619719
Alignment:
Q  81 ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||| |||  | ||||||| | |||||||||||||||| |  | ||| ||||| |||| |||||||||||||||    
T  13619799 ggctatgtttttagttatattctttgcaattgaagacaaataagaggtcatttagaggagatgtcgatggtttgaggaaca 13619719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 29047326 - 29047262
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaa 230  Q
    ||||||||| ||||||||| | |||||||| ||||  ||| |||||||||||  |||||||||||    
T  29047326 ttttgagtgttttgtagtgaggaatcatgtaaatcataaattcaagacatcatgtgaaggatcaa 29047262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 31436646 - 31436693
Alignment:
Q  232 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||||| ||||||||||||||   |||| ||||||||||||||    
T  31436646 gatatgaagattgacgatcaatggttctt---aggtatttgaagacaatac 31436693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 35135408 - 35135316
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagaca 278  Q
    ||||||| || |||||| ||| ||||||||||| || |||||  | | |||| ||| |||| |||||||||| |||  |||||||||||||||    
T  35135408 gaaatcaggtaaatcgacaaaacaagacatcacgtggaggattgagggtatggagaatgaaaatcaatggttattaggaggtttttgaagaca 35135316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 27417270 - 27417154
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||| |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||| | |||    
T  27417270 ttttaagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaatgatatgaatgttgaagaccaatggttctaagaag 27417171  T
Q  266 gtttttgaagacaatac 282  Q
    ||||||||| |||||||    
T  27417170 gtttttgaaaacaatac 27417154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 21505146 - 21505030
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| | |||||||| |||||| |||| ||||||||||||||| |||||| ||| ||||| ||||||| |||||||||| | |||    
T  21505146 ttttgagtgttttgtagtgaggaatcatgtaaatcgataaattaagacatcacatgaaagatcaaggatgtgaagtttgaagaccaatggttctgagaag 21505047  T
Q  266 gtttttgaagacaatac 282  Q
    |||||||||||||||||    
T  21505046 gtttttgaagacaatac 21505030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 282
Target Start/End: Complemental strand, 18236314 - 18236194
Alignment:
Q  161 aagtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    ||||||||||||| |||| ||||| |||||||||| | |||  ||| |||||||||||||||||||||| | |||||||||||||||  |||||||||||    
T  18236314 aagtattttgagt-ctttttagtgagaaatcatgtaactcggcaaaacaagacatcacatgaaggatcacaaatatgaagattgaaggccaatggttctt 18236216  T
Q  261 aaaaggtttttgaagacaatac 282  Q
    | |||||| |||||||||||||    
T  18236215 agaaggttgttgaagacaatac 18236194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 21505322 - 21505217
Alignment:
Q  54 tgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    |||||||||| |||||| || |||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||    
T  21505322 tgatgacggagcatcatatgatatttttggctatgtttttagtatttttctttgcatttgaagacaaataagatgagagttagagtagttgtcaatggtt 21505223  T
Q  153 tgagga 158  Q
    ||||||    
T  21505222 tgagga 21505217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 24188077 - 24188192
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||  ||||||||| |||||||||| ||||||  ||||||| ||||||||||||||||||  |||||||||||||||| |||| | ||||| ||     
T  24188077 ttttgagtattttgtagtgagaaatcatgtaaatcgaccaatcaaggcatcacatgaaggatcaagaatatgaagattgaaga-caatagatcttagaaa 24188175  T
Q  266 gtttttgaagacaatac 282  Q
    |||||||||||||||||    
T  24188176 gtttttgaagacaatac 24188192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 25473968 - 25474077
Alignment:
Q  53 ttgatgacggaacatcatgtgttattttggctatgttttaagtac-ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggt 151  Q
    |||||||| || |||||| ||  |||||||||||||||| ||||| |||| |||  ||||||||||||||||||||||| ||| ||||||||||||| ||    
T  25473968 ttgatgacagagcatcatatgacattttggctatgtttttagtacattttattttcatttgaagacaaataagatgagagttagaggagttgtcaattgt 25474067  T
Q  152 ttgaggaaca 161  Q
    ||||||||||    
T  25474068 ttgaggaaca 25474077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 22511053 - 22511169
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||| || ||||||||| |||||||||| |||||||||||||||||||||  |||| |||  | |||||||||||||| | |||||| ||| || | |    
T  22511053 ttttgattgttttgtagtgagaaatcatgtaaatcgaaaaatcaagacatcaagtgaaagattgaggatatgaagattgatgttcaatgattcatagatg 22511152  T
Q  266 gtttttgaagacaatac 282  Q
    |||||||||||||||||    
T  22511153 gtttttgaagacaatac 22511169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 35707735 - 35707843
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    ||||||| || |||||| ||  |||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||| || ||||||||||||||    
T  35707735 tgatgacagagcatcatatgacattttgactatgtttttagtactttttctttgtatttgaagacaaataagatgagagttagagaagttgtcaatggtt 35707834  T
Q  153 tgaggaaca 161  Q
    |||| ||||    
T  35707835 tgagaaaca 35707843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 21849080 - 21848965
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| ||||| |||| ||||| || | ||||||||||||||||||||||| ||||  || | |||| ||||||||||||||||||    
T  21849080 ttttgagt-ctttttagtgagaaataatgtaaatcggaagaacaagacatcacatgaaggatcaaggataataataatgaaaatcaatggttcttaaaag 21848982  T
Q  266 gtttttgaagacaatac 282  Q
    ||||| ||| |||||||    
T  21848981 gttttggaacacaatac 21848965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 24047531 - 24047606
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttct-taaaaggtttttgaagacaatac 282  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||||||||  ||||||||| ||||||||||||    
T  24047531 caagacatcccatgaaggatcaaggatatgaagaatgaagatcaatggttctcaaaaaggtttgtgaagacaatac 24047606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 17152256 - 17152377
Alignment:
Q  161 aagtattttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    |||| ||||||||  ||| ||||  |||||||||| |||||  ||| |||||||||   ||||||||||| |||||||||| |||| || ||||||||||    
T  17152256 aagtgttttgagttttttttagtaagaaatcatgtaaatcggcaaaacaagacatcgtgtgaaggatcaaggatatgaagaatgaatatgaatggttctt 17152355  T
Q  261 aaaaggtttttgaagacaatac 282  Q
    | |||||||||||||| |||||    
T  17152356 agaaggtttttgaagataatac 17152377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 32619598 - 32619683
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaa 162  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||  |||||  || ||||||||| ||||||| |||||||||    
T  32619598 ttttggctatatttttagtacttttctttgcatttgaagacaaataacttgagagatagaggagttgttaatggttagaggaacaa 32619683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 1732678 - 1732774
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| ||| || ||| |||||||||||||||||||| ||  |||||||||||||||||||||| |||||| ||  | ||||||| ||||||    
T  1732678 gaaatcatgtaaattgacaaaacaagacatcacatgaaggattaagaatatgaagattgaagatcaatgattcttagaatatatttgaaggcaatac 1732774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 30998879 - 30998994
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| |||||||||   | | |||| |||||| ||||||||| ||||  ||||||||||| |||||| | |||||||||||| |||||||| |||    
T  30998879 ttttgagtgttttgtagtgaagagtgatgtaaatcgacaaatcaagatatcaagtgaaggatcaaggatatgta-attgaagatcaagggttcttagaag 30998977  T
Q  266 gtttttgaagacaatac 282  Q
    ||| |||||||||||||    
T  30998978 gttgttgaagacaatac 30998994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 15454504 - 15454433
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||| ||| | |||||||    
T  15454504 caagacatcacatgaaggatcaaggatatgaagaataaagataaatggttcttaaaagttttctaaagacaa 15454433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 16593890 - 16593827
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| |||| ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  16593890 ttttttttgcatttgaagacaaataagattagagttataggagttgtcaatggtttgatgaaca 16593827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 19541145 - 19541245
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| |||||||||| |||||  |||  |||||||||  ||||||||| | ||||||||||||||||| |||||||||||| |||    
T  19541145 ttttgagt-ctttctagtgagaaatcatgtaaatcggcaaaataagacatcaagtgaaggatcgaggatatgaagattgaagaccaatggttcttataag 19541243  T
Q  266 gt 267  Q
    ||    
T  19541244 gt 19541245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 30998750 - 30998811
Alignment:
Q  100 ttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||  |||||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  30998750 ttctttgcctttgaagacaaataagatgagagttagatgagttgtcaatggtttgaggaaca 30998811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 14922026 - 14921930
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| ||||| |||| ||| ||||||  ||||| ||| | |||||||||||||||| ||||||||||||| ||||| | || |||||||||    
T  14922026 gaaatcatgtaaatcggaaaaacaatacatcatgtgaagaatcgaggatatgaagattgaagttcaatggttcttagaaggtatatgtagacaatac 14921930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 28278581 - 28278498
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| ||||||||||| ||||||||||||| |||||||| ||||||||| |||| ||| |||| || |||||||||||| |||||    
T  28278581 tttttgctatgtttta-gtacttttctttgcatttgaaggcaaataagaagagagttagaggatttctcaatggtttgaagaaca 28278498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 15829239 - 15829333
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggttttt 271  Q
    |||| |||| |||||||||| |||||| ||||||||||||||| ||||||||||  |||||||| |||||||| ||| ||||| || ||| |||||    
T  15829239 tttgcagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcattgatatgaa-attgaagaccaacggttcctataagtttttt 15829333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 1733063 - 1733141
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaa 162  Q
    |||||||| ||||||||| |||  |||||||||||||| |||||||| ||| ||||||||||||||  ||||| |||||    
T  1733063 tatgtttttagtactttttttttcatttgaagacaaatgagatgagagttagaggagttgtcaatgagttgagaaacaa 1733141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 35707911 - 35708026
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag-attgaagatcaatggttcttaaaa 264  Q
    ||||||||| ||||||||| | |||||||| ||||  |||||||||||||||  ||||| ||||| |  |||||| |||||| ||||| | |||||| ||    
T  35707911 ttttgagtgttttgtagtgaggaatcatgtaaatcataaaatcaagacatcatgtgaagtatcaagg--atgaagaattgaatatcaaggtttcttagaa 35708008  T
Q  265 ggtttttgaagacaatac 282  Q
    |||| |||||||||||||    
T  35708009 ggttgttgaagacaatac 35708026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 17415169 - 17415058
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| |||||| ||| |||||  ||| ||||||||||| ||||||||| | || |||||||||||| ||||||||||||||  ||    
T  17415169 ttttgagt-ctttttagtgagaaatcgtgtaaatcggcaaaacaagacatcacgtgaaggatcgaggacatgaagattgaa-atcaatggttcttaggag 17415072  T
Q  266 gtttttgaagacaa 279  Q
     | |||||||||||    
T  17415071 ttatttgaagacaa 17415058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 31262147 - 31262219
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    ||||||| ||||||||| ||| | |||||||||||||||||| |||||||||||  |||| |||||||||||||    
T  31262147 caagacaccacatgaag-atcgaggatatgaagattgaagattaatggttcttagtaggtctttgaagacaata 31262219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 282
Target Start/End: Complemental strand, 16593754 - 16593642
Alignment:
Q  169 tgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagat-tgaagatcaatggttcttaaaaggt 267  Q
    |||||| |||||||||   |||||||| ||||   ||||||||||||||  ||||||||||| |||  |||||  |||||||||| |||||||| |||||    
T  16593754 tgagtgttttgtagtgaagaatcatgtaaatcatcaaatcaagacatcatttgaaggatcaacgat--gaagaaatgaagatcaagggttcttagaaggt 16593657  T
Q  268 ttttgaagacaatac 282  Q
    | |||||||||||||    
T  16593656 tgttgaagacaatac 16593642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 18236486 - 18236376
Alignment:
Q  53 ttgatgacggaacatcatgtgttattttg-gctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggt 151  Q
    ||||||||||| |||||| || ||||||  |||||||||| |||  ||||||||| |||||||| |||| ||  ||  | |||||| |||||||||||||    
T  18236486 ttgatgacggagcatcatatgatattttatgctatgtttttagttattttctttgcatttgaaggcaaagaaattgtaatttatagaagttgtcaatggt 18236387  T
Q  152 ttgaggaacaa 162  Q
    ||||| |||||    
T  18236386 ttgagaaacaa 18236376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 21844766 - 21844704
Alignment:
Q  99 tttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||| ||||||||||||||||| ||  | ||| |||||||||||||||||| |||||||    
T  21844766 tttctttgcatttgaagacaaataagttgtaatttagaggagttgtcaatggttttaggaaca 21844704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 27917970 - 27917916
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaag 240  Q
    |||||||||| |||||| |||||||||||||| |||||||||||| || ||||||    
T  27917970 gaaatcatgtcaatcgacaaatcaagacatcagatgaaggatcaaggagatgaag 27917916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 17862560 - 17862629
Alignment:
Q  209 aagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagaca 278  Q
    ||||||||||||||| |||||| |||||||||| |||| |||  ||||||||| ||  ||||||||||||    
T  17862560 aagacatcacatgaaagatcaaggatatgaagaatgaaaatcggtggttcttagaatttttttgaagaca 17862629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 32619747 - 32619848
Alignment:
Q  176 tttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaag 275  Q
    ||||||| | |||||||||| | |||| ||||||||||||||| |    |||||| |||||||||| |||| |||||  ||||| | |||||||||||||    
T  32619747 tttgtagcgagaaatcatgtaattcgacaaatcaagacatcacgt----gatcaaggatatgaagaatgaa-atcaaaagttctaagaaggtttttgaag 32619841  T
Q  276 acaatac 282  Q
    |||||||    
T  32619842 acaatac 32619848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 19949725 - 19949629
Alignment:
Q  66 atcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||| || ||||||  ||||||||| ||||||||| ||||| ||||||||| |||||| ||||||  |  ||||||||| ||| ||||||||||||    
T  19949725 atcatatgatattttttctatgtttttagtactttttctttgtatttgaagataaataacatgagagattgaggagttgttaatagtttgaggaaca 19949629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 32276696 - 32276588
Alignment:
Q  54 tgatgacggaacatcatgtgtta-ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    |||||| |||||||||| || || |||||| |||||||| |||  ||||||||| ||||||||  |||||||| |  | ||| ||||| |||||||||||    
T  32276696 tgatgaaggaacatcatatggtacttttggatatgtttttagttattttctttgcatttgaaggaaaataagaggtcatttaaaggagatgtcaatggtt 32276597  T
Q  153 tgaggaaca 161  Q
    ||| |||||    
T  32276596 tgaagaaca 32276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 25474145 - 25474259
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||| || ||||||||| | |||||||| ||||   ||||||||||||||  ||||| ||||| ||| |  | ||||||| |||| |||||||| |||    
T  25474145 ttttgactgttttgtagtgaggaatcatgtaaatcatcaaatcaagacatcatgtgaagaatcaaggatgtaga-attgaaggtcaagggttcttagaag 25474243  T
Q  266 gtttttgaagacaata 281  Q
    ||| ||||||||||||    
T  25474244 gttgttgaagacaata 25474259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 31274131 - 31274178
Alignment:
Q  234 tatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||| ||||||||| ||||||||||| ||||| |||||||||||||    
T  31274131 tatgaaaattgaagattaatggttcttagaaggtctttgaagacaata 31274178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 31914092 - 31914045
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataag 124  Q
    |||| |||||||||| |||| ||||||||| |||||||||||||||||    
T  31914092 tttttgctatgtttttagtatttttctttgcatttgaagacaaataag 31914045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 18818875 - 18818925
Alignment:
Q  232 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||| | ||||||| ||||||||||| ||||| ||||||||||||||    
T  18818875 gatatgaaaactgaagattaatggttcttagaaggtctttgaagacaatac 18818925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 21843139 - 21843077
Alignment:
Q  99 tttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||||||| ||||||||||||||||| ||  | ||| |||||||| ||||||||| |||||||    
T  21843139 tttctttgcatttgaagacaaataagttgtaatttagaggagttgccaatggttttaggaaca 21843077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 15829136 - 15829173
Alignment:
Q  123 agatgagaattataggagttgtcaatggtttgaggaac 160  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  15829136 agatgagagttagaggagttgtcaatggtttgaggaac 15829173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 26962 - 26846
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| || |||||| |||||||||| |||||| |||| |||||||||| |||| |||||| |||||||| ||||||| ||||||||||||| ||     
T  26962 ttttgagtgtttagtagtgagaaatcatgtaaatcgacaaattaagacatcacgtgaaagatcaaggatatgaaaattgaagttcaatggttcttagaaa 26863  T
Q  266 gtttttgaagacaatac 282  Q
    ||| |||||||||||||    
T  26862 gttcttgaagacaatac 26846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 27109 - 27032
Alignment:
Q  81 ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaa-ttataggagttgtcaatggtttgagga 158  Q
    ||||||||||| |||||||||||||| ||||||||| ||||||||| |||| ||| | |||||||| |||| |||||||    
T  27109 ggctatgtttttagtacttttctttgcatttgaagataaataagat-agaagttacaagagttgtctatggattgagga 27032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 8e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 30355455 - 30355539
Alignment:
Q  197 aatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||| ||| |||||| |||||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  30355455 aatcgacaaaccaagacctcacatgaaggatcgaggatatgaagattgaagatcaatcgttcttagaaggtttttgaagacaata 30355539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 26499840 - 26499738
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||  |||||  ||| ||||| | ||| |||| |||| | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  26499840 tagtgagaaatcatgcaaatcggcaaaacaagataccacgtgaaagatcgaggatatgaagattgaagatcaatggttcttagaaggtttttgaagacaa 26499741  T
Q  280 tac 282  Q
    |||    
T  26499740 tac 26499738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 33638498 - 33638396
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| |||||  ||| ||| | ||||  ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| ||    
T  33638498 tagtgagaaatcatgtaaatcggcaaaacaatatatcaagtgaaggatcaaggatatgaagattgaagatcaatggttcttataaggtctttgaagataa 33638399  T
Q  280 tac 282  Q
    |||    
T  33638398 tac 33638396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 15574857 - 15574964
Alignment:
Q  54 tgatgacggaacatcatgtgttattttggctatgttttaagtactttt-ctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    ||||||| ||||||||| ||  ||||||||||| || | ||||||||| ||||| ||||||||||||||||||||||| ||| |||| |||||||| |||    
T  15574857 tgatgacagaacatcatatgacattttggctatcttgttagtactttttctttgcatttgaagacaaataagatgagatttagaggaattgtcaat-gtt 15574955  T
Q  153 tgaggaaca 161  Q
    |||||||||    
T  15574956 tgaggaaca 15574964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 16439566 - 16439681
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| |||||||||| ||||  |||| |||||||||| ||||| |||||  |||||||||| ||||||||||||||||||| ||     
T  16439566 ttttgagt-ctttttagtgagaaatcatgtaaatcagaaaaacaagacatcagatgaaagatcagggatatgaagaatgaagatcaatggttcttagaat 16439664  T
Q  266 gtttttgaagacaatac 282  Q
    | ||||||||| |||||    
T  16439665 ggttttgaagaaaatac 16439681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 15576321 - 15576254
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgt 144  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  15576321 ttttggctatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagaggagttgt 15576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 24507449 - 24507334
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||| | ||||||||| |||||| ||| |||| | ||||||||||||||| ||||||||  | ||||||||||||||||| |||||||| ||| |||    
T  24507449 ttttgagagttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaag 24507351  T
Q  266 gtttttgaagacaatac 282  Q
     ||| |||||| |||||    
T  24507350 ttttatgaagaaaatac 24507334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 30355260 - 30355360
Alignment:
Q  56 atgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttg 154  Q
    |||||||| |||||| || |||||| ||||||||||| |||||||||  ||| ||||||||  ||||||||||||| ||| || ||||||||||||||||    
T  30355260 atgacggagcatcatatgatatttttggctatgtttttagtacttttacttgcatttgaaggtaaataagatgagagttagagaagttgtcaatggtttg 30355359  T
Q  155 a 155  Q
    |    
T  30355360 a 30355360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 13759589 - 13759526
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| |||| ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  13759589 ttttatttgtatttgaagataaataagatgagagttagaggagttgtcaatggtttgaggaaca 13759526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 17860454 - 17860340
Alignment:
Q  167 tttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaagg 266  Q
    |||||||| ||||||||| |||||||||| | || | |||||| |||||||| |||||||| ||  ||| ||| |||||||  |||||||||||| ||||    
T  17860454 tttgagtgttttgtagtgagaaatcatgtaattcaacaaatcaggacatcacgtgaaggataaagtataagaa-attgaaggacaatggttcttagaagg 17860356  T
Q  267 tttttgaagacaatac 282  Q
    |||||| |||||||||    
T  17860355 tttttgtagacaatac 17860340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 14924572 - 14924491
Alignment:
Q  81 ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaacaa 162  Q
    ||||||||||| |||  ||||||||| |||||||| ||||||| |||  | ||| |||||||||||||||||||||||||||    
T  14924572 ggctatgtttttagttattttctttgcatttgaaggcaaataatatgtaatttagaggagttgtcaatggtttgaggaacaa 14924491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 260
Target Start/End: Complemental strand, 12972372 - 12972298
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttctt 260  Q
    |||||||||| ||||  |||| |||||||| || |||| |||| | |||||||||||||||||||||||||||||    
T  12972372 gaaatcatgtaaatcagaaaaccaagacataacgtgaaagatcgatgatatgaagattgaagatcaatggttctt 12972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 14924383 - 14924309
Alignment:
Q  208 caagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| |||||| | || ||||||||| |||||||||||||||||| |  || |||||||||||||||||    
T  14924383 caagacatcaaatgaagaaccagagatatgaaaattgaagatcaatggttcatggaatgtttttgaagacaatac 14924309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 15575032 - 15575147
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaaga-ttgaagatcaatggttcttaaaa 264  Q
    |||| |||| ||||||| | | |||||||| |||  | ||||||||||||||| ||||||||||| |||  ||||| ||||||||||| |||||||| ||    
T  15575032 ttttaagtgttttgtagcgaggaatcatgtaaattaacaaatcaagacatcacgtgaaggatcaacgat--gaagaattgaagatcaagggttcttagaa 15575129  T
Q  265 ggtttttgaagacaatac 282  Q
    |||  |||||||||||||    
T  15575130 ggtcgttgaagacaatac 15575147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 33638259 - 33638309
Alignment:
Q  232 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  33638259 gatatgaagattgaagatcaatggttcttataaggtctttgaagataatac 33638309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 9396612 - 9396498
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||||| |||| ||||| |||||||| | |||||  ||| ||||||||||| ||||||||||| || | ||||| |||||||||| | |||||| ||     
T  9396612 ttttgagt-ctttttagtgagaaatcat-taaatcggcaaaacaagacatcacgtgaaggatcaaggacaagaagaatgaagatcaacgattcttagaaa 9396515  T
Q  266 gtttttgaagacaatac 282  Q
     ||||||||||||||||    
T  9396514 ttttttgaagacaatac 9396498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 16527852 - 16527925
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgag 156  Q
    ||||||||||||||| ||||||||||||||      |||||||||||||||||| ||| ||||||||||  |||||||||    
T  16527852 ttttggctatgtttttagtacttttctttg------aagacaaataagatgagagttagaggagttgtcggtggtttgag 16527925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 281
Target Start/End: Complemental strand, 16387242 - 16387147
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaata 281  Q
    |||||||||| |||||  |||||||||||| |  ||| ||||||| ||||||||| || |||| ||||||| ||||||||| |||| |||| ||||    
T  16387242 gaaatcatgtaaatcggcaaatcaagacattaggtgagggatcaaggatatgaagtttaaagaccaatggtccttaaaaggatttttaagaaaata 16387147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 16387400 - 16387325
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaa 159  Q
    |||||||| |||| |||||||||  ||||||||| |||||||||  | ||| | ||||||||||||||||||||||    
T  16387400 tatgtttttagtagttttctttgtgtttgaagacgaataagatgtaatttagatgagttgtcaatggtttgaggaa 16387325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 26512732 - 26512670
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||||||| | |||| |||||||    
T  26512732 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatac 26512670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 26517848 - 26517786
Alignment:
Q  220 tgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||||||| | |||| |||||||    
T  26517848 tgaagaatcaaggatatgaaggatgaagatcaatggttcttaaaaggtctgtgaacacaatac 26517786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 32930399 - 32930336
Alignment:
Q  219 atgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||| |||||||||||||||||  |||| ||||||| |||||  ||||||||| ||||||||||    
T  32930399 atgagggatcaaagatatgaaggatgaaaatcaatgattcttggaaggtttttaaagacaatac 32930336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 32930610 - 32930547
Alignment:
Q  98 ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    |||| |||| |||||||| |||||||||||  | ||| ||||||||||||||||||| ||||||    
T  32930610 ttttttttgcatttgaaggcaaataagatgtcatttagaggagttgtcaatggtttgcggaaca 32930547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 24618056 - 24618106
Alignment:
Q  232 gatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||||||||||| |||||| ||| | ||| ||||||||||    
T  24618056 gatatgaagattgaagatcaatgattcttagaagatctttaaagacaatac 24618106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 15998444 - 15998549
Alignment:
Q  55 gatgacggaacatcatgtgttattttggctatgttttaagtac-ttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggttt 153  Q
    |||||| || |||||| ||  ||||||||||||||||  |||| ||||||||| ||||||||  |||| | |||||| ||| ||||||  || |||||||    
T  15998444 gatgacagatcatcatatgacattttggctatgttttttgtacgttttctttgcatttgaaggaaaatgatatgagagttagaggagtgttccatggttt 15998543  T
Q  154 gaggaa 159  Q
    ||||||    
T  15998544 gaggaa 15998549  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 12972543 - 12972471
Alignment:
Q  77 ttttggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatg 149  Q
    ||||||||||||||| |||  ||||||||| |||||||| ||| ||||| |  | ||| ||||||||||||||    
T  12972543 ttttggctatgtttttagttattttctttgcatttgaaggcaactaagaggtcatttagaggagttgtcaatg 12972471  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 20495948 - 20495868
Alignment:
Q  81 ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttgaggaaca 161  Q
    ||||||||||| |||| ||||||||| |||||||| ||| ||||| |  |  || || |||| ||||||||||||||||||    
T  20495948 ggctatgtttttagtaattttctttgtatttgaaggcaattaagaggtcatatagagaagttatcaatggtttgaggaaca 20495868  T

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Target: scaffold0065 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 12352 - 12467
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| ||||||||| |||||||||| |||||| ||||||||||||||| ||||||||  | ||||||||||| ||||| |||||||| ||| |||    
T  12352 ttttgagtgttttgtagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggattgacgatatgaagatcgaaga-caatggttgttagaag 12450  T
Q  266 gtttttgaagacaatac 282  Q
     ||| |||||| |||||    
T  12451 ttttatgaagaaaatac 12467  T

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Target: scaffold0011 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 228179 - 228078
Alignment:
Q  180 tagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaa 279  Q
    ||||| |||||||||| |||||| ||||||||||||||| ||||||||| |   |||||| |||||||| |||||||||||| ||||| |||||||||||    
T  228179 tagtgagaaatcatgtaaatcgacaaatcaagacatcacgtgaaggatcgagtgtatgaatattgaaga-caatggttcttagaaggtatttgaagacaa 228081  T
Q  280 tac 282  Q
    |||    
T  228080 tac 228078  T

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Target: scaffold0650 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 5765 - 5661
Alignment:
Q  177 ttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaaga 276  Q
    |||||||| |||||||||| ||| || |||| |||||||||||||||||||| | |||||||||||||||  ||||||||||||| ||||| ||| ||||    
T  5765 ttgtagtgagaaatcatgtaaattgacaaataaagacatcacatgaaggatcgaggatatgaagattgaa-ttcaatggttcttagaaggtctttaaaga 5667  T
Q  277 caatac 282  Q
     |||||    
T  5666 aaatac 5661  T

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Target: scaffold0386 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 8716 - 8600
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    |||||| || ||||||||| | |||||||| |||||| |||||||||||| | |||||||||||| || || ||| || ||||  |||  | ||||||||    
T  8716 ttttgaatgttttgtagtgaggaatcatgtaaatcgacaaatcaagacataaaatgaaggatcaaggaaataaagtttaaagacaaatattccttaaaag 8617  T
Q  266 gtttttgaagacaatac 282  Q
    |||||||||||||||||    
T  8616 gtttttgaagacaatac 8600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 13078 - 13014
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaa 230  Q
    ||||||||| ||||||||| | |||||||| |||||| |||||||||||||||||||||||||||    
T  13078 ttttgagtgttttgtagtgaggaatcatgtaaatcgacaaatcaagacatcacatgaaggatcaa 13014  T

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Target: scaffold0386; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 8892 - 8787
Alignment:
Q  54 tgatgacggaacatcatgtgttatttt-ggctatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtt 152  Q
    |||||| |||||||||| || |||||| || ||| |||| ||||||||| |||  |||| |||| ||||||||||||  ||| |||| ||||||||||||    
T  8892 tgatgatggaacatcatatgatatttttggttatttttttagtacttttattttcattttaagaaaaataagatgagggttagaggatttgtcaatggtt 8793  T
Q  153 tgagga 158  Q
     |||||    
T  8792 agagga 8787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 13223 - 13153
Alignment:
Q  84 tatgttttaagtacttttctttggatttgaagacaaataagatgagaattataggagttgtcaatggtttg 154  Q
    |||||||| ||||||||| |||  || | |||||||||||||||||| ||| |||| || |||||||||||    
T  13223 tatgtttttagtacttttattttcatattaagacaaataagatgagagttagaggatttttcaatggtttg 13153  T

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Target: scaffold0337 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 1916 - 2031
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||| | ||||||||| |||||| ||| |||| | ||||||||||||||| ||||||||  | ||||||||||||||||| |||||||| ||| |||    
T  1916 ttttgagagttttgtagtgagaaatcctgtaaatcaacaaatcaagacatcacgtgaaggattgacgatatgaagattgaaga-caatggttgttagaag 2014  T
Q  266 gtttttgaagacaatac 282  Q
     ||| |||||| |||||    
T  2015 ttttatgaagaaaatac 2031  T

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Target: scaffold0282 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 22582 - 22505
Alignment:
Q  204 aaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    ||||||||||||||| ||||| ||||| |||||||||| ||||| |||||||||| || ||||||||| ||||||||||    
T  22582 aaatcaagacatcacgtgaagaatcaaggatatgaagaatgaag-tcaatggttcatagaaggttttttaagacaatac 22505  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 446936 - 447014
Alignment:
Q  53 ttgatgacggaacatcatgtgttattttggctatgttttaagtacttttc-tttggatttgaagacaaataagatgaga 130  Q
    |||||||| || |||||| || |||||| |||||||||| |||||||||| |||  |||||||||||||||||||||||    
T  446936 ttgatgacagagcatcatatgatatttttgctatgtttttagtacttttcctttacatttgaagacaaataagatgaga 447014  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 447084 - 447199
Alignment:
Q  166 ttttgagtgctttgtagtgggaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaag 265  Q
    ||||||||| |||| |||| | |||||||| ||||   ||||||||||||||  ||||||||||| |||   || ||||||||||||  |||||||| ||    
T  447084 ttttgagtgttttgaagtgaggaatcatgtaaatcattaaatcaagacatcatgtgaaggatcaaggat-gaaaaattgaagatcaaaagttcttaacag 447182  T
Q  266 gtttttgaagacaatac 282  Q
    |||  ||||||||||||    
T  447183 gttactgaagacaatac 447199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 11685 - 11589
Alignment:
Q  186 gaaatcatgttaatcgaaaaatcaagacatcacatgaaggatcaaagatatgaagattgaagatcaatggttcttaaaaggtttttgaagacaatac 282  Q
    |||||||||| |||||| ||| ||||||||||  | ||||||  |  || ||||||||||| ||||||| |||||| ||||| ||||||||||||||    
T  11685 gaaatcatgtaaatcgacaaaacaagacatcaagttaaggattgagaatttgaagattgaatatcaatgattcttataaggtatttgaagacaatac 11589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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