View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8382_high_7 (Length: 419)
Name: NF8382_high_7
Description: NF8382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8382_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 404
Target Start/End: Complemental strand, 14787273 - 14786868
Alignment:
| Q |
1 |
aatatataaact-atatttaacacatcccatatttatatatccagtnnnnnnnn-ctcatatttaaacacattcagaagtgtttgattgtgacccaattt |
98 |
Q |
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| T |
14787273 |
aatatataaacttatatttaacacatcccatatttatatatccagtaaaaaaaaactcatatttaaacacattcagaagtgtttgattgtgacgcaattt |
14787174 |
T |
|
| Q |
99 |
gaattattttgtaacttatgtaaaagtttaatcaaagtatattttaaatttattgtaagcatgtaccgttaatgaaatatttttatacatttatccaatc |
198 |
Q |
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| T |
14787173 |
gaattattttgtaacttatgtaaaagtttaatcaaagtaggttttaaatttattgtaagcatgtaccgttaattaaatatttttatacatttatccaacc |
14787074 |
T |
|
| Q |
199 |
atttgttatcgtgtaatgttttttacgacattttagcgtcataaaagattcattatagtatggtttgattgaatgtatatatgtttaaacaagttttata |
298 |
Q |
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| T |
14787073 |
atttgttatcgtgtaatgttttttacgatattttagcgtcataaaagattcattatagtatggtttgattgaatgtatatatgtttaaacaagttttata |
14786974 |
T |
|
| Q |
299 |
ttattggtgtatatcaattagtgttaataaatctataatcattcatcataatgtaactataatcatatgcaggtaacgcgtctcaagtgtggtggtttca |
398 |
Q |
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| T |
14786973 |
ttattggtgtatatcaattagtgttaataaatacataatcatttatcataatgtaactataaccatatgcaggtaacgcgtctcaagtgtggtggtttca |
14786874 |
T |
|
| Q |
399 |
tatttg |
404 |
Q |
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|||||| |
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| T |
14786873 |
tatttg |
14786868 |
T |
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