View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8384_high_1 (Length: 431)

Name: NF8384_high_1
Description: NF8384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8384_high_1
NF8384_high_1
[»] chr6 (76 HSPs)
chr6 (1-415)||(26851116-26851529)
chr6 (81-300)||(26638123-26638342)
chr6 (81-300)||(26744089-26744308)
chr6 (107-415)||(26952224-26952529)
chr6 (71-300)||(26886830-26887055)
chr6 (200-300)||(26961832-26961932)
chr6 (74-300)||(27662591-27662814)
chr6 (126-300)||(26805222-26805396)
chr6 (126-300)||(26625853-26626027)
chr6 (126-300)||(26731830-26732004)
chr6 (126-300)||(25076614-25076788)
chr6 (130-300)||(27674846-27675016)
chr6 (126-218)||(25491409-25491501)
chr6 (84-300)||(27601951-27602165)
chr6 (200-300)||(26980130-26980230)
chr6 (126-293)||(28795137-28795304)
chr6 (130-232)||(27681746-27681848)
chr6 (107-300)||(26649197-26649387)
chr6 (107-300)||(26755165-26755355)
chr6 (130-231)||(27608392-27608493)
chr6 (330-414)||(25513323-25513407)
chr6 (126-298)||(25547703-25547875)
chr6 (331-415)||(27675206-27675293)
chr6 (126-250)||(28789156-28789280)
chr6 (331-415)||(28794856-28794940)
chr6 (331-379)||(31287059-31287107)
chr6 (325-415)||(26886553-26886646)
chr6 (322-380)||(25076333-25076391)
chr6 (200-300)||(26658703-26658803)
chr6 (200-300)||(26764674-26764774)
chr6 (331-379)||(27590612-27590660)
chr6 (331-379)||(28788868-28788916)
chr6 (331-414)||(26145445-26145528)
chr6 (331-413)||(26058356-26058438)
chr6 (331-413)||(26078326-26078408)
chr6 (331-379)||(26826306-26826354)
chr6 (331-379)||(26979893-26979941)
chr6 (331-415)||(27662845-27662929)
chr6 (331-379)||(27681467-27681515)
chr6 (331-378)||(26648966-26649013)
chr6 (331-378)||(26754934-26754981)
chr6 (295-378)||(27425189-27425272)
chr6 (126-177)||(27695859-27695910)
chr6 (126-232)||(26826678-26826784)
chr6 (262-300)||(27608524-27608562)
chr6 (262-300)||(27715904-27715942)
chr6 (126-298)||(25485713-25485885)
chr6 (126-171)||(25513725-25513770)
chr6 (126-171)||(25582557-25582602)
chr6 (126-171)||(26058769-26058814)
chr6 (126-171)||(26078739-26078784)
chr6 (126-171)||(26145847-26145892)
chr6 (329-378)||(26864092-26864141)
chr6 (331-380)||(27608749-27608798)
chr6 (334-414)||(25485429-25485509)
chr6 (331-379)||(26804999-26805047)
chr6 (331-379)||(26961594-26961642)
chr6 (331-415)||(27696220-27696304)
chr6 (331-379)||(27703846-27703894)
chr6 (331-379)||(27716129-27716177)
chr6 (129-225)||(28239207-28239303)
chr6 (129-225)||(28246188-28246284)
chr6 (126-173)||(27590394-27590441)
chr6 (262-317)||(27681661-27681716)
chr6 (126-173)||(31287427-31287474)
chr6 (262-300)||(27695995-27696033)
chr6 (197-231)||(27715839-27715873)
chr6 (331-376)||(25582193-25582238)
chr6 (261-298)||(26145720-26145757)
chr6 (200-232)||(25513664-25513696)
chr6 (331-415)||(25547415-25547499)
chr6 (200-232)||(26145786-26145818)
chr6 (200-232)||(27590468-27590500)
chr6 (129-225)||(28328430-28328526)
chr6 (129-225)||(28506066-28506162)
chr6 (200-232)||(31287368-31287400)
[»] chr4 (15 HSPs)
chr4 (82-317)||(18686881-18687113)
chr4 (82-300)||(18696675-18696890)
chr4 (82-232)||(18721346-18721493)
chr4 (82-232)||(18676832-18676979)
chr4 (82-174)||(18652750-18652839)
chr4 (82-232)||(18728771-18728915)
chr4 (82-232)||(18726266-18726412)
chr4 (82-174)||(18682034-18682123)
chr4 (295-378)||(18076283-18076366)
chr4 (267-317)||(18682171-18682221)
chr4 (267-317)||(18726447-18726497)
chr4 (267-317)||(18677014-18677064)
chr4 (267-300)||(18728950-18728983)
chr4 (338-378)||(18682391-18682431)
chr4 (338-378)||(18726667-18726707)
[»] chr8 (4 HSPs)
chr8 (126-300)||(22023997-22024171)
chr8 (130-232)||(29271111-29271213)
chr8 (330-379)||(22023760-22023809)
chr8 (262-300)||(29271243-29271281)
[»] scaffold0419 (2 HSPs)
scaffold0419 (126-293)||(10263-10430)
scaffold0419 (321-378)||(10019-10076)
[»] scaffold0277 (4 HSPs)
scaffold0277 (126-293)||(1956-2123)
scaffold0277 (126-250)||(10919-11043)
scaffold0277 (331-379)||(11283-11331)
scaffold0277 (330-378)||(2319-2367)
[»] chr1 (7 HSPs)
chr1 (124-300)||(26138721-26138897)
chr1 (93-300)||(28124865-28125066)
chr1 (126-232)||(265599-265705)
chr1 (322-415)||(28125313-28125406)
chr1 (330-415)||(265959-266044)
chr1 (322-375)||(26138421-26138474)
chr1 (262-300)||(265735-265773)
[»] chr2 (2 HSPs)
chr2 (126-232)||(17990415-17990521)
chr2 (336-376)||(17990853-17990893)
[»] scaffold0003 (1 HSPs)
scaffold0003 (295-378)||(62091-62174)
[»] scaffold0349 (3 HSPs)
scaffold0349 (262-300)||(16003-16041)
scaffold0349 (331-379)||(15768-15816)
scaffold0349 (197-231)||(16072-16106)
[»] scaffold0038 (2 HSPs)
scaffold0038 (129-225)||(39369-39465)
scaffold0038 (129-225)||(46350-46446)
[»] scaffold0019 (1 HSPs)
scaffold0019 (158-225)||(55513-55580)


Alignment Details
Target: chr6 (Bit Score: 352; Significance: 0; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 26851529 - 26851116
Alignment:
Q  1 catccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacattcttctacttgaataataaatgaaatactacatat--ca 98  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  ||    
T  26851529 catccagcgtcatgtagttgctgttacattagcaataaaatatattattacacaataacattcttctacttgaataataaatgaaatactatatatatca 26851430  T
Q  99 aatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatt 198  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26851429 aatactactgcaagataaaacaat---aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatt 26851333  T
Q  199 tagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatt 298  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26851332 tagattcggtggaatccctctaatttcctcaagaaaattgcagccatacaatacaagctccctaagacggtgacattcactaaggcactcgggaagaatt 26851233  T
Q  299 tttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctctt 398  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26851232 tttaaattgacaaatgatatgcttaagtgacgaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacgatgtaactcaatctctt 26851133  T
Q  399 ctatatttgtcatcttg 415  Q
    |||||||||||||||||    
T  26851132 ctatatttgtcatcttg 26851116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 81 - 300
Target Start/End: Complemental strand, 26638342 - 26638123
Alignment:
Q  81 atgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatc 180  Q
    ||||||||||| ||| |||||||||  ||||||||||||||  | |||||||||||||||||| | ||||||| ||||||||||||||||| | ||| ||    
T  26638342 atgaaatactatataacaaatactatggcaagataaaacaacaacaacaaacctgactcaatagccttcttctacttgaggaactcaatgaatcgcattc 26638243  T
Q  181 tattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcacta 280  Q
     |||||||||| |||||||||||| |||||||||||||||||||| ||||||    |||| ||||||||   |||   ||||||| |||||||| |||||    
T  26638242 cattgcagacaagtaatttagatttggtggaatccctctaatttcttcaagagccttgcattcatccaaattaaggatcctaagaaggtgacatacacta 26638143  T
Q  281 aggcactcgggaagaatttt 300  Q
    |||||||| |||||||||||    
T  26638142 aggcactcaggaagaatttt 26638123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 81 - 300
Target Start/End: Complemental strand, 26744308 - 26744089
Alignment:
Q  81 atgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatc 180  Q
    ||||||||||| ||| |||||||||  ||||||||||||||  | |||||||||||||||||| | ||||||| ||||||||||||||||| | ||| ||    
T  26744308 atgaaatactatataacaaatactatggcaagataaaacaacaacaacaaacctgactcaatagccttcttctacttgaggaactcaatgaatcgcattc 26744209  T
Q  181 tattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcacta 280  Q
     |||||||||| |||||||||||| |||||||||||||||||||| ||||||    |||| ||||||||   |||   ||||||| |||||||| |||||    
T  26744208 cattgcagacaagtaatttagatttggtggaatccctctaatttcttcaagagccttgcattcatccaaattaaggatcctaagaaggtgacatacacta 26744109  T
Q  281 aggcactcgggaagaatttt 300  Q
    |||||||| |||||||||||    
T  26744108 aggcactcaggaagaatttt 26744089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 415
Target Start/End: Complemental strand, 26952529 - 26952224
Alignment:
Q  107 tgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcg 206  Q
    |||||||||||||||    |||||||||||||||||| ||||||||| |||| ||||||||| || | |||||||| |||||| ||    | ||||||||    
T  26952529 tgcaagataaaacaac---aacaaacctgactcaatagcattcttctacttgcggaactcaacgactcgcaatctactgcagaaagtctttctagattcg 26952433  T
Q  207 gtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttttaaact 306  Q
    ||||||||||||| |||||||||||  ||  |||| ||||||  | ||  ||   ||||||||| ||||||||||||||||||||||||||||| ||| |    
T  26952432 gtggaatccctctgatttcctcaagggaatagcagccatccacgataacttcaacaagatggtggcattcactaaggcactcgggaagaattttgaaatt 26952333  T
Q  307 gacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatattt 406  Q
    | ||    ||||  ||||| ||| ||||||||||||||||  ||||||| ||||||||||||||||||| ||   || || |  |||||||| |||||||    
T  26952332 gtcactaaatattattaagcgacgaagttcactgagatttccaaatgaaaatggcaattctcctatggatgtttcatatatcgtaatctcttttatattt 26952233  T
Q  407 gtcatcttg 415  Q
    |||||||||    
T  26952232 gtcatcttg 26952224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 71 - 300
Target Start/End: Complemental strand, 26887055 - 26886830
Alignment:
Q  71 tgaataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatg 170  Q
    ||||| ||| |||||| |||| ||||||||||||| ||||||||| |||||    |||||||||||||||||||||||||||| ||||||||||||||||    
T  26887055 tgaattatatatgaaa-actaaatatcaaatactattgcaagatagaacaaa---aacaaacctgactcaataacattcttctacttgaggaactcaatg 26886960  T
Q  171 atttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtg 270  Q
    | | ||| | ||| ||||| ||||  || ||||| ||||| ||||||||||||||||||||| |  |||| | || |||| ||||   ||||||| ||||    
T  26886959 aatggcattttatagcagaaaggtctttaagatttggtggtatccctctaatttcctcaagagacttgcaatgattcaattcaagtatcctaagaaggtg 26886860  T
Q  271 acattcactaaggcactcgggaagaatttt 300  Q
    ||||||  ||||||||||||||||||||||    
T  26886859 acattccttaaggcactcgggaagaatttt 26886830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 26961932 - 26961832
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 299  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  26961932 agatttggtggaatccctctaatttcctcaagaaacttgcagtcatccaacacaagctccccaagacggtgacattcactaaggcactcgggaagaattt 26961833  T
Q  300 t 300  Q
    |    
T  26961832 t 26961832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 300
Target Start/End: Original strand, 27662591 - 27662814
Alignment:
Q  74 ataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatt 173  Q
    |||||| ||||||||||| ||||||||||| | |||||||||||| ||    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27662591 ataatatatgaaatactaaatatcaaataccagtgcaagataaaataaa---aacaaacctgactcaataacattcttctacttgaggaactcaatgatt 27662687  T
Q  174 tgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgaca 273  Q
    | ||  ||  |||| | || |   ||||||| ||||||||||||||||||||||||||| |    |||| ||||||   ||| | |  ||||| ||||||    
T  27662688 tacatccttctgcataaagatttgttagattgggtggaatccctctaatttcctcaagagactcacagtaatccaaataaagatgctcaagatagtgaca 27662787  T
Q  274 ttcactaaggcactcgggaagaatttt 300  Q
    |||||||||||||| ||||||||||||    
T  27662788 ttcactaaggcacttgggaagaatttt 27662814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 300
Target Start/End: Complemental strand, 26805396 - 26805222
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||||| ||  ||  |||||| || |  |||||||||||||||||||||||||||||    
T  26805396 aacaaacctgactcattaacattcttctacttgatgaactcaatgatttacatccttctgcagaaagctcttttagattcggtggaatccctctaatttc 26805297  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||| |  |||||| |  |||  |||| | | |||||||||||||||||||||| ||||| |||||||||||    
T  26805296 ctcaagagatgtgcagtaagacaaatcaagatgcttaagatggtgacattcactaagacactcaggaagaatttt 26805222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 126 - 300
Target Start/End: Complemental strand, 26626027 - 26625853
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||  ||| ||  ||||||||| |||||||||||| ||||||||||||||||||||    
T  26626027 aacaaacctgacttaataacattcttctagttgaggaactcaatgataagcattccgttgcagacaagtaatttagatttggtggaatccctctaatttc 26625928  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||| |   |||| |||| ||   |||   ||||||| ||||||||||| ||||||| || |||||||||||    
T  26625927 ctcaagagactcgcagccatctaaattaaggatcctaagaaggtgacattcattaaggcattcaggaagaatttt 26625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 126 - 300
Target Start/End: Complemental strand, 26732004 - 26731830
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||  ||| ||  ||||||||| |||||||||||| ||||||||||||||||||||    
T  26732004 aacaaacctgacttaataacattcttctagttgaggaactcaatgataagcattccgttgcagacaagtaatttagatttggtggaatccctctaatttc 26731905  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||| |   |||| |||| ||   |||   ||||||| ||||||||||| ||||||| || |||||||||||    
T  26731904 ctcaagagactcgcagccatctaaattaaggatcctaagaaggtgacattcattaaggcattcaggaagaatttt 26731830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 126 - 300
Target Start/End: Complemental strand, 25076788 - 25076614
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||| ||||||||||||||| |||| |||| ||||||| |||||   ||||| ||||| | ||| |||||| |||||||||| |||||||||    
T  25076788 aacaaacctgacccaataacattcttctacttgtggaattcaatgaattgcatcttattgtagacaagcaatatagattgggtggaatccatctaatttc 25076689  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
     ||||||     ||| | |||||||  ||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  25076688 ttcaagagcccagcaataatccaatttaagatccttaagatggcgacattcactaaggcactcgggaagaatttt 25076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 130 - 300
Target Start/End: Original strand, 27674846 - 27675016
Alignment:
Q  130 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 229  Q
    ||||||||||| |||||||||||| | |||||||||||||||||| || |    ||| || || |  || ||||| ||||||||||||||||||||||||    
T  27674846 aacctgactcattaacattcttctacatgaggaactcaatgatttacattgatatgcggaaagctctttaagatttggtggaatccctctaatttcctca 27674945  T
Q  230 agaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||| ||  ||||| || |||  |||| | | |||||||||||||||||||||||||||| |||||||||||    
T  27674946 agagaagagcagtaatgcaaaccaagatgcttaagatggtgacattcactaaggcactcaggaagaatttt 27675016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 126 - 218
Target Start/End: Original strand, 25491409 - 25491501
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct-attgcagacaggtaatttagattcggtggaatccctc 218  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||  |||||||||||||    
T  25491409 aacaaacctgactcaataacattcttctacttgaggaactcaatgatttgc-atctcattgcagacaagtaatttagatcaggtggaatccctc 25491501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 84 - 300
Target Start/End: Original strand, 27601951 - 27602165
Alignment:
Q  84 aaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctat 183  Q
    ||||||||  |||||||||||||||||  |||||||||  |  ||||||||||||||||||||||||||| |||||||||||||||||||  || ||  |    
T  27601951 aaatactatctatcaaatactactgcacaataaaacaacaa--acaaacctgactcaataacattcttctacttgaggaactcaatgattcacagtcctt 27602048  T
Q  184 tgca-gacaggtaattt-agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatcca-atacaagctccctaagatggtgacattcacta 280  Q
    |||| || |  || ||| ||||| ||||||| |||||||||||||||||||||  ||||| |||||| ||| ||  |   ||||| ||||||||||||||    
T  27602049 tgcatgaaa--tattttaagatttggtggaaaccctctaatttcctcaagaaacttgcagccatccacata-aatgtttttaagaaggtgacattcacta 27602145  T
Q  281 aggcactcgggaagaatttt 300  Q
    |||||||| |||||||||||    
T  27602146 aggcactcaggaagaatttt 27602165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 26980230 - 26980130
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 299  Q
    ||||| ||||||| |||||||||||||||||||||  ||||| ||||||||||||||| || |||||||||||||||| |||||||||| || |||||||    
T  26980230 agatttggtggaaaccctctaatttcctcaagaaacttgcagccatccaatacaagctgccgaagatggtgacattcattaaggcactcaggtagaattt 26980131  T
Q  300 t 300  Q
    |    
T  26980130 t 26980130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 293
Target Start/End: Complemental strand, 28795304 - 28795137
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||  | |||||||| ||    |  ||||| ||||||||||||||||||||    
T  28795304 aacaaacctgactcaatagcattcttctacttgaggaactcaatgatttgcatcccattgcagaaagcctttcaagatttggtggaatccctctaatttc 28795205  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaa 293  Q
    ||| ||| |  |||||| |||||||  ||| |   ||||| ||| |||||||||||||||||| ||||    
T  28795204 ctcgagagacttgcagttatccaatctaaggttattaagaaggtaacattcactaaggcactcaggaa 28795137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 27681848 - 27681746
Alignment:
Q  130 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 229  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |||| | | ||| | || |  |||||||| ||||||||||||||||||||||||    
T  27681848 aacctgactcattaacattcttctacttgaggaactcaatgatttacaatatctagcacaaagctcttttagatttggtggaatccctctaatttcctca 27681749  T
Q  230 aga 232  Q
    |||    
T  27681748 aga 27681746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 26649387 - 26649197
Alignment:
Q  107 tgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct-attgcagacaggtaatttagattc 205  Q
    |||||||||||||||    ||| |||||||||||||||||||||||| |||||||||||||||||||  | |||| | |||||| ||  | || |||||     
T  26649387 tgcaagataaaacaac---aacgaacctgactcaataacattcttctacttgaggaactcaatgattcac-atctcaatgcagaaagccatttaagattt 26649292  T
Q  206 ggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||||| ||||||||||||||| |  | ||| | ||||  | ||  ||   |||||||||||||||||||||| ||||||||||||||||    
T  26649291 ggtggaatccccctaatttcctcaagagaggtacagccgtccacgataatttcaacaagatggtgacattcactaaggaactcgggaagaatttt 26649197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 107 - 300
Target Start/End: Complemental strand, 26755355 - 26755165
Alignment:
Q  107 tgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct-attgcagacaggtaatttagattc 205  Q
    |||||||||||||||    ||| |||||||||||||||||||||||| |||||||||||||||||||  | |||| | |||||| ||  | || |||||     
T  26755355 tgcaagataaaacaac---aacgaacctgactcaataacattcttctacttgaggaactcaatgattcac-atctcaatgcagaaagccatttaagattt 26755260  T
Q  206 ggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||||| ||||||||||||||| |  | ||| | ||||  | ||  ||   |||||||||||||||||||||| ||||||||||||||||    
T  26755259 ggtggaatccccctaatttcctcaagagaggtacagccgtccacgataatttcaacaagatggtgacattcactaaggaactcgggaagaatttt 26755165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 27608392 - 27608493
Alignment:
Q  130 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 229  Q
    ||||||||||| |||| ||||| | ||||||||||||||||||||||| ||  ||||||| ||  | || ||||| ||||||||||||||||||||||||    
T  27608392 aacctgactcattaactttcttttacttgaggaactcaatgatttgcattcgcttgcagaaagccatttaagatttggtggaatccctctaatttcctca 27608491  T
Q  230 ag 231  Q
    ||    
T  27608492 ag 27608493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 414
Target Start/End: Complemental strand, 25513407 - 25513323
Alignment:
Q  330 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatctt 414  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||||  || || |||||| |||| |||||||||||||||    
T  25513407 aaagttcactgaaattttgaaatgaagatggcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatctt 25513323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 298
Target Start/End: Complemental strand, 25547875 - 25547703
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||| |  || ||   |||| | ||    |  ||||| ||||||||||||||||||||    
T  25547875 aacaaacctgactcattaacattcttatacttgaggaactcaatgaataacactcgtctgcaaaaagcctttcaagatttggtggaatccctctaatttc 25547776  T
Q  226 ctcaagaaaaatgcag-tcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatt 298  Q
    |||||||||| ||||| || || |||| ||| |   |||||||||||||||| ||||||||||| |||||||||    
T  25547775 ctcaagaaaattgcagttcttcaaata-aagttgtttaagatggtgacattcgctaaggcactcaggaagaatt 25547703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 27675206 - 27675293
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatgga---agtacaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||||||||||||||| |||||||||||||||||||||||||||   | || ||| ||| ||||||||||  |||||||||||||||    
T  27675206 aagttcactgagattttgaaatgaagatggcaattctcctatggatatattataatctaaatcaatctctttgatatttgtcatcttg 27675293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 28789280 - 28789156
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||  | |||||||| ||       ||||| ||||||||||||||||||||    
T  28789280 aacaaacctgactcaatagcatttttctacttgaggaactcaatgatttgcatccgattgcagaaagccttgcaagatttggtggaatccctctaatttc 28789181  T
Q  226 ctcaagaaaaatgcagtcatccaat 250  Q
    ||| ||| |  |||||| |||||||    
T  28789180 ctccagagacttgcagttatccaat 28789156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 28794940 - 28794856
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||  ||   |||||||||  |||||||||||||||    
T  28794940 aagttcattgagattttgaaatgaagatggcaattctcctatggaagtataagatataccaatctctttgatatttgtcatcttg 28794856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 31287107 - 31287059
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31287107 aagttcactgagattttgaaatgaagatggcaattctcctatggaagta 31287059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 415
Target Start/End: Complemental strand, 26886646 - 26886553
Alignment:
Q  325 gtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagt---acaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||   |  ||||||| ||||||||| || |||||||||||||    
T  26886646 gtgacgaagttcactgagattttcaaatgaaaatggcaatcctcctatggaagtgttattatgtaacgcaatctcttttaaatttgtcatcttg 26886553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 25076391 - 25076333
Alignment:
Q  322 taagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtac 380  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  25076391 taagtcacgaagttcactgagattttgaaatgaaaatggcaattctcctatggaagtac 25076333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 26658803 - 26658703
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 299  Q
    |||||| |||||||||||||||||||||||||| |   ||| | ||||||   ||| | | ||||| ||||||||||||||||||||||||| |||||||    
T  26658803 agattctgtggaatccctctaatttcctcaagatattggcatttatccaaataaagatgcttaagaaggtgacattcactaaggcactcgggtagaattt 26658704  T
Q  300 t 300  Q
    |    
T  26658703 t 26658703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 26764774 - 26764674
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 299  Q
    |||||| |||||||||||||||||||||||||| |   ||| | ||||||   ||| | | ||||| ||||||||||||||||||||||||| |||||||    
T  26764774 agattctgtggaatccctctaatttcctcaagatattggcatttatccaaataaagatgcttaagaaggtgacattcactaaggcactcgggtagaattt 26764675  T
Q  300 t 300  Q
    |    
T  26764674 t 26764674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 27590612 - 27590660
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27590612 aagttcactgagattttgaaatgaagatggcaattctcgtatggaagta 27590660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 28788916 - 28788868
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  28788916 aagttcactgagattttgaaatgaagatggcaattctcttatggaagta 28788868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 414
Target Start/End: Complemental strand, 26145528 - 26145445
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatctt 414  Q
    ||||||||||| ||||| ||||||| || |||||||| |||||||||||  || || |||||| |||| |||||||||||||||    
T  26145528 aagttcactgaaattttgaaatgaatatcgcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatctt 26145445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 413
Target Start/End: Complemental strand, 26058438 - 26058356
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatct 413  Q
    ||||| ||||| ||||| ||||||| ||||||||||| |||||||||||  || || |||||| |||| ||||||||||||||    
T  26058438 aagtttactgaaattttgaaatgaatatggcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatct 26058356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 413
Target Start/End: Complemental strand, 26078408 - 26078326
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatct 413  Q
    ||||| ||||| ||||| ||||||| ||||||||||| |||||||||||  || || |||||| |||| ||||||||||||||    
T  26078408 aagtttactgaaattttgaaatgaatatggcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatct 26078326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 26826354 - 26826306
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  26826354 aagttcattgagatttcgaaatgaagatggcaattctcctatggaagta 26826306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 26979941 - 26979893
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||||    
T  26979941 aagttcactgagatattgaaatgaaaatggcaattctcctatggaagta 26979893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 27662845 - 27662929
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||||| ||||||||||||||||| |||||| |||| |||||||||||  |  ||||  |||||||| |||||||| |||||||    
T  27662845 aagttcattgagatttttaaatgaaaatggcatttcttctatggaagtatcacataaccaaatctcttttatatttgacatcttg 27662929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 27681515 - 27681467
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  27681515 aagttcactgagattttgaaatgaaaatggcagttctcctatggaagta 27681467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 26649013 - 26648966
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||    
T  26649013 aagttcactgagattatgaaatgaagatggcaattctcctattgaagt 26648966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 26754981 - 26754934
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||    
T  26754981 aagttcactgagattatgaaatgaagatggcaattctcctattgaagt 26754934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 27425189 - 27425272
Alignment:
Q  295 aatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    |||||||||| || ||  ||||||  ||||||||| ||||||||| ||||||| ||| ||| |||| |||||||||||||||||    
T  27425189 aatttttaaattgtcacctgatattgttaagtgacgaagttcactaagattttgaaaggaaaatggaaattctcctatggaagt 27425272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 27695859 - 27695910
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgca 177  Q
    ||||||||||||||| |||||||||||| | ||| |||||||||||||||||    
T  27695859 aacaaacctgactcattaacattcttctacatgatgaactcaatgatttgca 27695910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 26826784 - 26826678
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||| ||||||| ||||||| | |||||  ||||||||||||  ||  |||||||||| |  |  | |||||| ||||||||||||||||| ||    
T  26826784 aacaaacctggctcaatagcattcttatacttgataaactcaatgattcacatcctattgcagagaaattgtatagattgggtggaatccctctaatctc 26826685  T
Q  226 ctcaaga 232  Q
    |||||||    
T  26826684 ctcaaga 26826678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 27608524 - 27608562
Alignment:
Q  262 aagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27608524 aagatggtgacattcactaaggcactcaggaagaatttt 27608562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 27715904 - 27715942
Alignment:
Q  262 aagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27715904 aagatggtgacattcactaaggcactcaggaagaatttt 27715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 298
Target Start/End: Complemental strand, 25485885 - 25485713
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    ||||||||||||||| |||||||||| | ||||||||| ||||||| |  || ||  ||||| | ||    |  ||||| ||||||||||||||||||||    
T  25485885 aacaaacctgactcattaacattcttatacttgaggaattcaatgaataacactcgtttgcaaaaagcctttcaagatttggtggaatccctctaatttc 25485786  T
Q  226 ctcaagaaaaatgcagt-catccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatt 298  Q
    |||||||    |||| | | || |||| ||| | | ||||| |||||||||||| |||||||||||||||||||    
T  25485785 ctcaagagccttgcacttcttcaaata-aagatgcttaagacggtgacattcaccaaggcactcgggaagaatt 25485713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 25513770 - 25513725
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 171  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  25513770 aacaaacctgactcattaacattcttatacttgaggaactcaatga 25513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 25582602 - 25582557
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 171  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  25582602 aacaaacctgactcattaacattcttatacttgaggaactcaatga 25582557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 26058814 - 26058769
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 171  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  26058814 aacaaacctgactcattaacattcttatacttgaggaactcaatga 26058769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 26078784 - 26078739
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 171  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  26078784 aacaaacctgactcattaacattcttatacttgaggaactcaatga 26078739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 26145892 - 26145847
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 171  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  26145892 aacaaacctgactcattaacattcttatacttgaggaactcaatga 26145847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 26864141 - 26864092
Alignment:
Q  329 caaagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    ||||||||||||||||||| ||||||| ||| |||||||| |||||||||    
T  26864141 caaagttcactgagattttgaaatgaaaatgacaattctcttatggaagt 26864092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 380
Target Start/End: Original strand, 27608749 - 27608798
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtac 380  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||    
T  27608749 aagttcactgagattttgaaatgaaaatggcagttctcttatggaagtac 27608798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 414
Target Start/End: Complemental strand, 25485509 - 25485429
Alignment:
Q  334 ttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatctt 414  Q
    |||||||| ||||| ||||||| ||||||||||| |||||||||||  || || || ||| |||| |||||||| ||||||    
T  25485509 ttcactgaaattttgaaatgaatatggcaattcttctatggaagtatcatatatcttaatatcttttatatttgacatctt 25485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 26805047 - 26804999
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  26805047 aagttcactcagattttgaaatgaagatagcaattctcctatgggagta 26804999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 26961642 - 26961594
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    |||||||||||||| || ||||||| |||| ||||||||||||||||||    
T  26961642 aagttcactgagatattgaaatgaaaatggaaattctcctatggaagta 26961594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 415
Target Start/End: Original strand, 27696220 - 27696304
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||||||||||||||| ||||||| |||||| || |||||||||| || ||  ||  |||||||||| ||||| || |||||||    
T  27696220 aagttcactgagattttgaaatgaaaatggcagttttcctatggaaatataaaatatatcaatctcttttatatgtgccatcttg 27696304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 27703846 - 27703894
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||||||||||| ||||||| |||||| ||||||||| ||||||    
T  27703846 aagttcactgagattttgaaatgaaaatggcagttctcctatagaagta 27703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 27716129 - 27716177
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||||    
T  27716129 aagttcactaagattttgaaatgaaaatggcagttctcctatggaagta 27716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 28239303 - 28239207
Alignment:
Q  129 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||| |||||| |||  |||||   |||||| ||||||||||||| | | ||||||||| ||  |||| ||| ||||||||||||||||||||    
T  28239303 aaacctgattcaatagcatgtttctggccgaggaaatcaatgatttgcagtattttgcagacaagtgttttaaatttggtggaatccctctaatttc 28239207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 28246284 - 28246188
Alignment:
Q  129 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||| |||||| |||  || |||  |||||| |||||||||||||   ||||||||||| ||  |||| ||| ||||||||||||||||||||    
T  28246284 aaacctgattcaatagcatgtttttgcacgaggaagtcaatgatttgcagcgtattgcagacaagtgttttaaatttggtggaatccctctaatttc 28246188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 27590394 - 27590441
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatt 173  Q
    ||||||||||| ||| |||||||||||| ||||| |||||||||||||    
T  27590394 aacaaacctgattcattaacattcttctacttgatgaactcaatgatt 27590441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 27681716 - 27681661
Alignment:
Q  262 aagatggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 317  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||| ||  ||||||||    
T  27681716 aagatggtgacattcacgaaggcactcaggaagaattttgaaattgctaaatgata 27681661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 31287474 - 31287427
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatt 173  Q
    ||||||||||||||  |||||||||||| |||||||||||||| ||||    
T  31287474 aacaaacctgactcgttaacattcttctacttgaggaactcaacgatt 31287427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 27695995 - 27696033
Alignment:
Q  262 aagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  27695995 aagatggtgactttcactaaggcactctggaagaatttt 27696033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 27715839 - 27715873
Alignment:
Q  197 tttagattcggtggaatccctctaatttcctcaag 231  Q
    |||||||| ||||||||||||||||||||||||||    
T  27715839 tttagatttggtggaatccctctaatttcctcaag 27715873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 376
Target Start/End: Complemental strand, 25582238 - 25582193
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaa 376  Q
    ||||||||||| ||||| ||||||| ||||||||||| ||||||||    
T  25582238 aagttcactgaaattttgaaatgaatatggcaattcttctatggaa 25582193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 298
Target Start/End: Complemental strand, 26145757 - 26145720
Alignment:
Q  261 taagatggtgacattcactaaggcactcgggaagaatt 298  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  26145757 taagacggtgacattcaccaaggcactcgggaagaatt 26145720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 25513696 - 25513664
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaaga 232  Q
    ||||| |||||||||||||||||||||||||||    
T  25513696 agatttggtggaatccctctaatttcctcaaga 25513664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 415
Target Start/End: Complemental strand, 25547499 - 25547415
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||||||||| ||||| ||||||| | ||||||||| |||| ||||||  || || ||  || |||| ||||||||||||||||    
T  25547499 aagttcactgaaattttgaaatgaatacggcaattcttctatagaagtatcatatatcttgatatcttttatatttgtcatcttg 25547415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 26145818 - 26145786
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaaga 232  Q
    ||||| |||||||||||||||||||||||||||    
T  26145818 agatttggtggaatccctctaatttcctcaaga 26145786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 27590468 - 27590500
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaaga 232  Q
    ||||| |||||||||||||||||||||||||||    
T  27590468 agatttggtggaatccctctaatttcctcaaga 27590500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 28328526 - 28328430
Alignment:
Q  129 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||| |||||| |||  || |||  |||||| |||||||||||||   | |||||||||  || |||| ||| ||||||||||||||||||||    
T  28328526 aaacctgattcaatagcatgtttttgcacgaggaagtcaatgatttgcagcattttgcagacaaatattttaaatttggtggaatccctctaatttc 28328430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 28506162 - 28506066
Alignment:
Q  129 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||| |||||| |||  || |||  |||||| |||||||||||||   | |||||||||  || |||| ||| ||||||||||||||||||||    
T  28506162 aaacctgattcaatagcatgtttttgcacgaggaagtcaatgatttgcagcattttgcagacaaatattttaaatttggtggaatccctctaatttc 28506066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 31287400 - 31287368
Alignment:
Q  200 agattcggtggaatccctctaatttcctcaaga 232  Q
    ||||| |||||||||||||||||||||||||||    
T  31287400 agatttggtggaatccctctaatttcctcaaga 31287368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 18686881 - 18687113
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 181  Q
    |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||     
T  18686881 tgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaatgatttacaatca 18686977  T
Q  182 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaa 281  Q
      ||||   || || || |||||||||||||||||||||||||||||||||    ||  |  ||||||||  ||   ||| ||| |||||||||||||||    
T  18686978 tatgcatcaagatatttgagattcggtggaatccctctaatttcctcaagatgcgtgttgaaatccaataggagggtcctcagaaggtgacattcactaa 18687077  T
Q  282 ggcactcgggaagaatttttaaactgacaaatgata 317  Q
    ||||||||||||||||||| ||| || |||| ||||    
T  18687078 ggcactcgggaagaattttgaaattgccaaaggata 18687113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 82 - 300
Target Start/End: Original strand, 18696675 - 18696890
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 181  Q
    |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| |||||||||||||||||||| | |||     
T  18696675 tgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaatgatttac-atcg 18696770  T
Q  182 at-tgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcacta 280  Q
    || ||||   || || || ||||||||||||| |||||||||||||||||||    ||  |  ||||||||  ||   ||| ||| ||||||||||||||    
T  18696771 atatgcatcaagatatttgagattcggtggaagccctctaatttcctcaagatgcctgttgaaatccaataggagggtcctcagaaggtgacattcacta 18696870  T
Q  281 aggcactcgggaagaatttt 300  Q
    ||||||||||||||||||||    
T  18696871 aggcactcgggaagaatttt 18696890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 18721346 - 18721493
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 181  Q
    |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| |||||||||||||||||||| || |||    
T  18721346 tgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaatgatttacattct 18721442  T
Q  182 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 232  Q
    | |||    || || || ||||||||||||| |||||||||||||||||||    
T  18721443 aatgcttcaagatatttgagattcggtggaaaccctctaatttcctcaaga 18721493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 18676832 - 18676979
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 181  Q
    |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| |||||||||||||||||||| ||   |    
T  18676832 tgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaatgatttacatctt 18676928  T
Q  182 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 232  Q
    | |||    |  || || ||||||||||||| |||||||||||||||||||    
T  18676929 aatgcttcaaaatatttgagattcggtggaaaccctctaatttcctcaaga 18676979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 18652750 - 18652839
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgattt 174  Q
    |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18652750 tgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaatgattt 18652839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 18728771 - 18728915
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 181  Q
    ||||||||||| |||||||||||| ||||||| |||||||      ||||||||||||||||||||||||||  ||||||||||||||||||| || ||     
T  18728771 tgaaatactacttatcaaatactattgcaagaaaaaacaa------caaacctgactcaataacattcttctagttgaggaactcaatgatttacattca 18728864  T
Q  182 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 232  Q
    | ||||   ||  | || ||||||||||||| |||||||||||||||||||    
T  18728865 aatgcatcaagacatttgagattcggtggaaaccctctaatttcctcaaga 18728915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 18726266 - 18726412
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 181  Q
    |||||||||||| ||||||||||| ||||||| ||||||   | |||||||||||||||| || | ||||||  ||||||||||||||||||| ||  ||    
T  18726266 tgaaatactacacatcaaatactattgcaagaaaaaaca---acaacaaacctgactcaacaa-aatcttctatttgaggaactcaatgatttacatcct 18726361  T
Q  182 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 232  Q
    | ||||   ||  | || ||||||||||||| |||||||||||||||||||    
T  18726362 aatgcacgaagacatttgagattcggtggaaaccctctaatttcctcaaga 18726412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 18682034 - 18682123
Alignment:
Q  82 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgattt 174  Q
    |||||||||||| ||||||||||| ||||||| |||||||    |||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  18682034 tgaaatactacacatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaacaacattcttctatttgagcaactcaatgattt 18682123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 18076366 - 18076283
Alignment:
Q  295 aatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    |||||||||| || ||  ||||||  ||||||||| ||||||||| ||||||| ||| ||| |||| |||||||||||||||||    
T  18076366 aatttttaaattgtcacctgatattgttaagtgacgaagttcactaagattttgaaaggaaaatggaaattctcctatggaagt 18076283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 18682171 - 18682221
Alignment:
Q  267 ggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 317  Q
    |||||||||||||||||||||||||||||||||| ||| || |||| ||||    
T  18682171 ggtgacattcactaaggcactcgggaagaattttgaaattgccaaaggata 18682221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 18726447 - 18726497
Alignment:
Q  267 ggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 317  Q
    |||||||||||||||||||||||||||||||||| ||| || |||| ||||    
T  18726447 ggtgacattcactaaggcactcgggaagaattttgaaattgccaaaggata 18726497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 18677014 - 18677064
Alignment:
Q  267 ggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 317  Q
    ||||||||||| |||||||||||||||||||||| ||| || |||| ||||    
T  18677014 ggtgacattcattaaggcactcgggaagaattttgaaattgccaaaggata 18677064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 18728950 - 18728983
Alignment:
Q  267 ggtgacattcactaaggcactcgggaagaatttt 300  Q
    |||||||||||||||||||||| |||||||||||    
T  18728950 ggtgacattcactaaggcactcaggaagaatttt 18728983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 18682391 - 18682431
Alignment:
Q  338 ctgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    |||||||||| ||||||| |||||||||||| |||||||||    
T  18682391 ctgagattttgaaatgaaaatggcaattctcttatggaagt 18682431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 18726667 - 18726707
Alignment:
Q  338 ctgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    |||||||||| ||||||| |||||||||||| |||||||||    
T  18726667 ctgagattttgaaatgaaaatggcaattctcttatggaagt 18726707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 300
Target Start/End: Complemental strand, 22024171 - 22023997
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||    |  ||||| ||||||||||||||||||||    
T  22024171 aacaaacctgactcaataacattcttctacttgaggaactcaatgatttgcattctattgcagaaagcctttcaagatttggtggaatccctctaatttc 22024072  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||| | |  |||||  ||||||   |||  ||| || | ||||||||||| ||||||||||||||||||||||    
T  22024071 ctcaacagatttgcagcgatccaaattaagaacccaaacaaggtgacattcattaaggcactcgggaagaatttt 22023997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 29271111 - 29271213
Alignment:
Q  130 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 229  Q
    ||||||||||| |||||||||| | |||||||||||||||||||  |||| |    |||| || |  |||||||| |||||||||||||||||||||| |    
T  29271111 aacctgactcattaacattcttttacttgaggaactcaatgattcacaatattcaacagaaagctcttttagatttggtggaatccctctaatttcctta 29271210  T
Q  230 aga 232  Q
    |||    
T  29271211 aga 29271213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 22023809 - 22023760
Alignment:
Q  330 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||||||||    
T  22023809 aaagtttactgagattttgaaaagaagatggcaattctcttatggaagta 22023760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 29271243 - 29271281
Alignment:
Q  262 aagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  29271243 aagatggagacattcactaaggcactcaggaagaatttt 29271281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 126 - 293
Target Start/End: Complemental strand, 10430 - 10263
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||  | |||||||| ||    |  ||||| |||| |||||||||||||||    
T  10430 aacaaacctgactcaatagcattcttctacttgaggaactcaatgatttgcatcccattgcagaaagcctttcaagatttggtgcaatccctctaatttc 10331  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaa 293  Q
    ||| ||| |  |||||| |||||||| ||| |   ||||| |||||||||||||||||||||| ||||    
T  10330 ctccagagacttgcagttatccaatataaggttattaagaaggtgacattcactaaggcactcaggaa 10263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 10076 - 10019
Alignment:
Q  321 ttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  10076 ttaactgaaaaagttcattgagattttgaaatgaagatggcaattctcttatggaagt 10019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 60; Significance: 2e-25; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 126 - 293
Target Start/End: Original strand, 1956 - 2123
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||  | |||||||| ||    |  ||||| ||||||||||||||||||||    
T  1956 aacaaacctgactcaatagcattcttctacttgaagaactcaatgatttgcatcccattgcagaaagcatttcaagatttggtggaatccctctaatttc 2055  T
Q  226 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaa 293  Q
    ||| ||| |  |||||| |||||||| |||     ||||| |||||||||||||||||||||| ||||    
T  2056 ctccagagacttgcagttatccaatataaggatattaagaaggtgacattcactaaggcactcaggaa 2123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 10919 - 11043
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||  | |||||||| ||       ||||| ||||||||||||||||||||    
T  10919 aacaaacctgactcaatagcatttttctacttgaggaactcaatgatttgcatccgattgcagaaagccttgcaagatttggtggaatccctctaatttc 11018  T
Q  226 ctcaagaaaaatgcagtcatccaat 250  Q
    ||| ||| |  |||||| |||||||    
T  11019 ctccagagacttgcagttatccaat 11043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 379
Target Start/End: Original strand, 11283 - 11331
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11283 aagttcactgagattttgaaatgaagatggcaattctcttatggaagta 11331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 2319 - 2367
Alignment:
Q  330 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  2319 aaagttcattgagattttgaaatgaagatggcaattctcttatggaagt 2367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 300
Target Start/End: Complemental strand, 26138897 - 26138721
Alignment:
Q  124 ataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatt 223  Q
    |||||||||||||||||||||||| ||| | | ||||||| ||||||| ||||| | ||||||||| |  |  |||||||| |||||||||||| |||||    
T  26138897 ataacaaacctgactcaataacatccttatacatgaggaagtcaatgacttgcattgtattgcagaaaacttttttagatttggtggaatccctttaatt 26138798  T
Q  224 tcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||     ||||| |||||||| ||||    |||| | ||||||||||| |||||||||| |||||||||||    
T  26138797 tcctcaaggtttttgcagccatccaattcaaggattctaataaggtgacattcattaaggcactcaggaagaatttt 26138721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 93 - 300
Target Start/End: Original strand, 28124865 - 28125066
Alignment:
Q  93 atatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacag 192  Q
    ||||||||||||| ||||||| |||||||      |||||||| ||||||| ||||||||| | ||||||| | |||||||  ||    |||||||| |     
T  28124865 atatcaaatactagtgcaagaaaaaacaa------caaacctggctcaatagcattcttctacatgaggaagttaatgattcacatcgcattgcagaaaa 28124958  T
Q  193 gtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcggga 292  Q
      | ||||| || ||||||||||||||||||||||||||| |  ||||||||||||||  |||  || | ||| |||||||||||||||| |||||||||    
T  28124959 ccattttaggtttggtggaatccctctaatttcctcaagagacttgcagtcatccaatctaaggacctttagaaggtgacattcactaagacactcggga 28125058  T
Q  293 agaatttt 300  Q
    ||||||||    
T  28125059 agaatttt 28125066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 265599 - 265705
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||    ||| | || |  || ||||| ||||||||||||||||||||    
T  265599 aacaaacctgactcaataacattcttttacttgaggaactcaatgagttgcattcatacgcaaaaagctctttaagatttggtggaatccctctaatttc 265698  T
Q  226 ctcaaga 232  Q
    |||||||    
T  265699 ctcaaga 265705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 28125313 - 28125406
Alignment:
Q  322 taagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||| || ||||||||||||||||| ||||||| |||| ||||||| ||||||||| | | | |||  |||||||||||||||||||||||||    
T  28125313 taagtcacgaagttcactgagattttgaaatgaaaatggtaattctcttatggaagttccacgcaaccaaatctcttctatatttgtcatcttg 28125406  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 415
Target Start/End: Original strand, 265959 - 266044
Alignment:
Q  330 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttg 415  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||||   ||  |||  ||| | |||||||||||||||||||    
T  265959 aaagtccactgagattttgaaatgaagatggcaattctcttatggaagtttcatacaacaaaatattttctatatttgtcatcttg 266044  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 322 - 375
Target Start/End: Complemental strand, 26138474 - 26138421
Alignment:
Q  322 taagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatgga 375  Q
    |||||||  ||||||||||| ||||| ||||||| |||||||||||||||||||    
T  26138474 taagtgagcaagttcactgaaattttgaaatgaaaatggcaattctcctatgga 26138421  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 265735 - 265773
Alignment:
Q  262 aagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  265735 aagatggtgacattcactaaggcactcaggaagagtttt 265773  T

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Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 17990415 - 17990521
Alignment:
Q  126 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    ||||||||||||| | ||| |||||||| ||||||||| ||||||||||||| ||||||||||| |  |  |  |||||||||||||||||| |||||||    
T  17990415 aacaaacctgactaagtaaaattcttctacttgaggaaatcaatgatttgcactctattgcagatattttttcaagattcggtggaatccctttaatttc 17990514  T
Q  226 ctcaaga 232  Q
    |||||||    
T  17990515 ctcaaga 17990521  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 17990853 - 17990893
Alignment:
Q  336 cactgagatttttaaatgaagatggcaattctcctatggaa 376  Q
    |||||||||||| ||||||| ||||||||||||||||||||    
T  17990853 cactgagattttgaaatgaaaatggcaattctcctatggaa 17990893  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 62174 - 62091
Alignment:
Q  295 aatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagt 378  Q
    |||||||||| || ||  ||||||  ||||||||| ||||||||| ||||||| ||| ||| |||| |||||||||||||||||    
T  62174 aatttttaaattgtcacctgatattgttaagtgacgaagttcactaagattttgaaaggaaaatggaaattctcctatggaagt 62091  T

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Target: scaffold0349 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 300
Target Start/End: Complemental strand, 16041 - 16003
Alignment:
Q  262 aagatggtgacattcactaaggcactcgggaagaatttt 300  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16041 aagatggtgacattcactaaggcactcaggaagaatttt 16003  T

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Target: scaffold0349; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 379
Target Start/End: Complemental strand, 15816 - 15768
Alignment:
Q  331 aagttcactgagatttttaaatgaagatggcaattctcctatggaagta 379  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||||    
T  15816 aagttcactaagattttgaaatgaaaatggcagttctcctatggaagta 15768  T

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Target: scaffold0349; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 16106 - 16072
Alignment:
Q  197 tttagattcggtggaatccctctaatttcctcaag 231  Q
    |||||||| ||||||||||||||||||||||||||    
T  16106 tttagatttggtggaatccctctaatttcctcaag 16072  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 39465 - 39369
Alignment:
Q  129 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||| |||||| |||  |||||   |||||| ||||||||||||| | | ||||||||| ||  |||| ||| ||||||||||||||||||||    
T  39465 aaacctgattcaatagcatgtttctggccgaggaaatcaatgatttgcagtattttgcagacaagtgttttaaatttggtggaatccctctaatttc 39369  T

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Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 46446 - 46350
Alignment:
Q  129 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||||| |||||| |||  || |||  |||||| |||||||||||||   ||||||||||| ||  |||| ||| ||||||||||||||||||||    
T  46446 aaacctgattcaatagcatgtttttgcacgaggaagtcaatgatttgcagcgtattgcagacaagtgttttaaatttggtggaatccctctaatttc 46350  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 55513 - 55580
Alignment:
Q  158 gaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 225  Q
    |||||| |||||||||||||   ||||||||||| ||  |||| ||| ||||||||||||||||||||    
T  55513 gaggaagtcaatgatttgcagcgtattgcagacaagtgttttacatttggtggaatccctctaatttc 55580  T

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