View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8385_high_13 (Length: 329)

Name: NF8385_high_13
Description: NF8385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8385_high_13
NF8385_high_13
[»] chr5 (31 HSPs)
chr5 (1-310)||(40753182-40753493)
chr5 (2-139)||(32129638-32129775)
chr5 (1-139)||(4895755-4895893)
chr5 (1-139)||(35660629-35660767)
chr5 (1-140)||(11775708-11775848)
chr5 (1-139)||(14349721-14349858)
chr5 (1-139)||(37266648-37266786)
chr5 (1-138)||(4592719-4592855)
chr5 (1-132)||(18625441-18625572)
chr5 (4-139)||(13032036-13032170)
chr5 (4-132)||(39902339-39902467)
chr5 (29-139)||(1475686-1475796)
chr5 (2-139)||(8440992-8441129)
chr5 (1-141)||(34827109-34827247)
chr5 (15-137)||(10173867-10173985)
chr5 (25-106)||(32793324-32793405)
chr5 (1-137)||(3057174-3057310)
chr5 (1-65)||(36290593-36290657)
chr5 (13-75)||(28142807-28142870)
chr5 (11-64)||(3041338-3041391)
chr5 (3-52)||(29340999-29341048)
chr5 (1-62)||(41660100-41660161)
chr5 (1-97)||(3057375-3057471)
chr5 (1-65)||(11960610-11960674)
chr5 (61-113)||(43309061-43309113)
chr5 (18-65)||(2984427-2984474)
chr5 (13-64)||(10362046-10362097)
chr5 (1-48)||(40162737-40162784)
chr5 (58-123)||(16500484-16500549)
chr5 (68-112)||(30355212-30355256)
chr5 (1-53)||(43222129-43222181)
[»] chr8 (32 HSPs)
chr8 (1-139)||(30426689-30426827)
chr8 (1-140)||(41511178-41511317)
chr8 (4-139)||(36991273-36991408)
chr8 (1-141)||(28069634-28069774)
chr8 (1-139)||(10672532-10672670)
chr8 (1-139)||(10652637-10652776)
chr8 (13-139)||(28318934-28319060)
chr8 (1-133)||(24101939-24102071)
chr8 (1-138)||(40695267-40695404)
chr8 (2-139)||(44859188-44859324)
chr8 (16-131)||(8412179-8412294)
chr8 (5-131)||(45113195-45113321)
chr8 (30-141)||(12177613-12177724)
chr8 (30-141)||(12422041-12422152)
chr8 (3-137)||(27490028-27490162)
chr8 (1-65)||(26749568-26749632)
chr8 (11-65)||(1937185-1937239)
chr8 (71-139)||(5033023-5033091)
chr8 (2-65)||(30796269-30796331)
chr8 (44-122)||(37966505-37966583)
chr8 (1-58)||(34612562-34612619)
chr8 (15-111)||(36748525-36748617)
chr8 (1-53)||(21486926-21486978)
chr8 (14-66)||(24557214-24557266)
chr8 (16-123)||(6014127-6014234)
chr8 (1-48)||(17867680-17867727)
chr8 (11-65)||(3763552-3763606)
chr8 (3-65)||(42761704-42761766)
chr8 (1-66)||(6399914-6399979)
chr8 (32-65)||(24241672-24241705)
chr8 (72-137)||(39143443-39143508)
chr8 (83-131)||(16999758-16999806)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-139)||(207980-208118)
[»] chr6 (26 HSPs)
chr6 (1-139)||(1249166-1249304)
chr6 (1-139)||(4804365-4804503)
chr6 (1-139)||(29698080-29698218)
chr6 (4-139)||(7162001-7162136)
chr6 (1-139)||(21159389-21159523)
chr6 (1-112)||(17944106-17944217)
chr6 (4-107)||(12412586-12412689)
chr6 (30-139)||(32737791-32737900)
chr6 (1-132)||(27826462-27826593)
chr6 (1-139)||(13089769-13089899)
chr6 (5-131)||(227588-227714)
chr6 (18-112)||(30460764-30460858)
chr6 (1-65)||(24484870-24484934)
chr6 (30-108)||(1518327-1518405)
chr6 (30-106)||(1516238-1516314)
chr6 (3-97)||(2800633-2800727)
chr6 (3-65)||(7215874-7215936)
chr6 (18-53)||(2720376-2720411)
chr6 (1-65)||(2142313-2142377)
chr6 (5-61)||(13888547-13888603)
chr6 (1-48)||(7098216-7098263)
chr6 (85-131)||(13888617-13888663)
chr6 (11-65)||(32254061-32254115)
chr6 (30-66)||(1515573-1515609)
chr6 (25-65)||(11180472-11180512)
chr6 (61-97)||(17398774-17398810)
[»] chr1 (33 HSPs)
chr1 (1-139)||(12380930-12381068)
chr1 (1-139)||(12384997-12385135)
chr1 (1-139)||(50484303-50484441)
chr1 (1-139)||(12151684-12151822)
chr1 (2-139)||(40328193-40328332)
chr1 (1-129)||(50294083-50294211)
chr1 (30-139)||(45977939-45978048)
chr1 (34-139)||(7841763-7841868)
chr1 (1-139)||(48327174-48327312)
chr1 (18-141)||(23861992-23862116)
chr1 (33-132)||(2845189-2845289)
chr1 (5-131)||(18976329-18976452)
chr1 (13-132)||(46608409-46608523)
chr1 (1-107)||(24977189-24977295)
chr1 (18-131)||(23916013-23916124)
chr1 (18-137)||(5047418-5047536)
chr1 (1-65)||(52280059-52280123)
chr1 (3-65)||(39426201-39426263)
chr1 (92-139)||(35977883-35977930)
chr1 (1-65)||(30077664-30077728)
chr1 (3-107)||(32887802-32887906)
chr1 (18-65)||(26372243-26372290)
chr1 (3-65)||(26860072-26860134)
chr1 (13-137)||(44483687-44483810)
chr1 (72-137)||(10646833-10646898)
chr1 (41-106)||(45970796-45970861)
chr1 (1-69)||(7844975-7845043)
chr1 (1-53)||(24413302-24413354)
chr1 (24-97)||(19910511-19910583)
chr1 (1-48)||(6948850-6948899)
chr1 (11-65)||(26768886-26768940)
chr1 (48-97)||(40988674-40988723)
chr1 (17-65)||(46045678-46045726)
[»] chr4 (49 HSPs)
chr4 (1-140)||(5763182-5763321)
chr4 (13-140)||(12241440-12241567)
chr4 (1-139)||(19901938-19902076)
chr4 (1-139)||(34778338-34778476)
chr4 (1-141)||(56558194-56558334)
chr4 (1-140)||(18207060-18207199)
chr4 (1-139)||(23610559-23610697)
chr4 (1-120)||(3952190-3952309)
chr4 (30-140)||(12153087-12153197)
chr4 (2-139)||(5416486-5416625)
chr4 (4-139)||(33247153-33247286)
chr4 (4-132)||(38079743-38079871)
chr4 (44-140)||(52018699-52018795)
chr4 (1-139)||(39862434-39862572)
chr4 (1-139)||(47922095-47922233)
chr4 (4-132)||(24073541-24073668)
chr4 (1-128)||(33262572-33262699)
chr4 (38-139)||(17080697-17080798)
chr4 (1-98)||(30567859-30567956)
chr4 (14-137)||(3326435-3326559)
chr4 (1-77)||(12312496-12312572)
chr4 (10-131)||(31862249-31862370)
chr4 (49-128)||(12312571-12312650)
chr4 (1-137)||(25442194-25442331)
chr4 (5-131)||(47922391-47922517)
chr4 (1-58)||(56269096-56269153)
chr4 (1-65)||(5524438-5524502)
chr4 (11-65)||(48084555-48084609)
chr4 (1-65)||(37002271-37002335)
chr4 (1-65)||(42010108-42010172)
chr4 (1-65)||(56453840-56453904)
chr4 (39-104)||(43447638-43447704)
chr4 (3-97)||(23474070-23474164)
chr4 (31-97)||(33841854-33841920)
chr4 (13-106)||(1871228-1871320)
chr4 (49-125)||(26428574-26428650)
chr4 (17-53)||(36688224-36688260)
chr4 (1-48)||(25219003-25219050)
chr4 (1-48)||(32146510-32146557)
chr4 (1-48)||(46238974-46239021)
chr4 (30-65)||(47834572-47834607)
chr4 (1-48)||(53526096-53526143)
chr4 (1-48)||(55160391-55160438)
chr4 (30-64)||(5361435-5361469)
chr4 (16-66)||(46804621-46804671)
chr4 (1-58)||(1015874-1015931)
chr4 (13-65)||(4404281-4404333)
chr4 (1-53)||(28701855-28701907)
chr4 (13-53)||(52030726-52030766)
[»] chr2 (27 HSPs)
chr2 (1-140)||(35316741-35316880)
chr2 (1-132)||(28564815-28564947)
chr2 (1-132)||(13238605-13238736)
chr2 (30-132)||(39465699-39465801)
chr2 (1-140)||(23259507-23259646)
chr2 (42-139)||(41983401-41983497)
chr2 (42-128)||(374499-374585)
chr2 (35-139)||(10877619-10877724)
chr2 (30-139)||(45625111-45625216)
chr2 (1-65)||(374984-375048)
chr2 (2-69)||(21454515-21454582)
chr2 (1-65)||(23459866-23459930)
chr2 (14-66)||(30709100-30709152)
chr2 (51-137)||(2061296-2061382)
chr2 (31-97)||(12949429-12949494)
chr2 (11-65)||(29188644-29188698)
chr2 (16-64)||(8988847-8988895)
chr2 (16-66)||(2063343-2063393)
chr2 (21-77)||(11864856-11864912)
chr2 (1-65)||(30840872-30840935)
chr2 (30-65)||(3354812-3354847)
chr2 (1-48)||(13780506-13780553)
chr2 (3-65)||(4446918-4446980)
chr2 (31-77)||(4603159-4603205)
chr2 (11-48)||(40254180-40254217)
chr2 (27-59)||(19908777-19908809)
chr2 (29-69)||(30217477-30217517)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-139)||(16417-16555)
[»] chr7 (35 HSPs)
chr7 (4-139)||(21151069-21151204)
chr7 (1-139)||(25084748-25084886)
chr7 (1-139)||(12139245-12139382)
chr7 (4-136)||(16366438-16366570)
chr7 (3-137)||(47226096-47226229)
chr7 (1-132)||(18198180-18198311)
chr7 (1-127)||(7362497-7362623)
chr7 (1-128)||(9559074-9559201)
chr7 (1-139)||(45260447-45260586)
chr7 (1-132)||(4888391-4888522)
chr7 (1-139)||(44647882-44648019)
chr7 (5-131)||(33450431-33450557)
chr7 (5-131)||(47500307-47500433)
chr7 (13-137)||(29630967-29631091)
chr7 (10-76)||(39855842-39855908)
chr7 (1-132)||(32915883-32916011)
chr7 (25-97)||(40019640-40019712)
chr7 (1-65)||(47799920-47799984)
chr7 (15-65)||(30588526-30588576)
chr7 (1-97)||(46802351-46802445)
chr7 (13-65)||(19889066-19889118)
chr7 (5-131)||(34985970-34986095)
chr7 (1-53)||(989132-989184)
chr7 (1-48)||(19027704-19027751)
chr7 (1-48)||(20726885-20726932)
chr7 (13-66)||(8149599-8149652)
chr7 (24-137)||(30153225-30153337)
chr7 (13-65)||(32916160-32916212)
chr7 (1-48)||(4269187-4269234)
chr7 (16-75)||(8734502-8734560)
chr7 (17-64)||(11828945-11828992)
chr7 (1-48)||(14696778-14696825)
chr7 (1-48)||(30102501-30102548)
chr7 (21-111)||(40023296-40023385)
chr7 (14-51)||(47080433-47080470)
[»] chr3 (22 HSPs)
chr3 (1-139)||(43719967-43720105)
chr3 (1-137)||(34373750-34373886)
chr3 (1-139)||(2229900-2230038)
chr3 (2-127)||(34373606-34373731)
chr3 (1-139)||(40851690-40851829)
chr3 (1-139)||(19830451-19830591)
chr3 (4-112)||(27033595-27033703)
chr3 (1-127)||(46167322-46167448)
chr3 (1-139)||(12402883-12403021)
chr3 (1-137)||(550836-550972)
chr3 (5-131)||(48084744-48084870)
chr3 (1-106)||(566794-566898)
chr3 (1-65)||(42613071-42613135)
chr3 (1-65)||(31523688-31523752)
chr3 (5-131)||(40810380-40810505)
chr3 (1-65)||(49679290-49679354)
chr3 (34-128)||(52859433-52859528)
chr3 (17-65)||(1995435-1995483)
chr3 (30-65)||(27959098-27959133)
chr3 (35-132)||(2310235-2310330)
chr3 (31-65)||(3009230-3009264)
chr3 (61-137)||(32577451-32577526)
[»] scaffold0250 (3 HSPs)
scaffold0250 (1-139)||(7064-7202)
scaffold0250 (143-243)||(6489-6585)
scaffold0250 (249-308)||(6611-6670)
[»] scaffold0006 (1 HSPs)
scaffold0006 (30-139)||(73889-73998)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-139)||(6455-6585)
[»] scaffold0456 (1 HSPs)
scaffold0456 (30-107)||(13645-13722)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-132)||(22462-22593)
[»] scaffold0008 (1 HSPs)
scaffold0008 (3-132)||(9223-9349)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-65)||(17326-17390)
[»] scaffold0468 (1 HSPs)
scaffold0468 (34-135)||(5531-5632)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-48)||(4721-4768)
[»] scaffold0252 (1 HSPs)
scaffold0252 (38-107)||(10531-10600)


Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 40753182 - 40753493
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40753182 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 40753281  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccctagataatgaggccaaagtatagaaatggagaaggaaaccaaatgcatacccttg--tctc 198  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  40753282 agaaatggagaagcacataaatggagaggatcctaaccctagataatgaggccaaagtatagaaatggagaaggaaaccaaatgcatacccttgtctctc 40753381  T
Q  199 actatctatccccgaagcaagaaatacaacacacctaaaaacaattccagcaagcactcccaggtagcgcataacataaactaccaagtacctaccccat 298  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40753382 actatctatccccgaagcaagaaatacaacacacctaaaaacaattccagcaagcactcccaggtagcgcataacataaactaccaagtacctaccccat 40753481  T
Q  299 ccatacaacaat 310  Q
    ||||||||||||    
T  40753482 ccatacaacaat 40753493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 32129638 - 32129775
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaa 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||    
T  32129638 aaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaa 32129737  T
Q  102 gaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||| |||| || |||||||||||||||||||||||    
T  32129738 gaaatggagaaacatataaatggagaggatcctaaccc 32129775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 4895755 - 4895893
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |    
T  4895755 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattga 4895854  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| || ||||||| |||||||||||||||    
T  4895855 agaaatggagaaacatataaatgaagaggatcctaaccc 4895893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 35660629 - 35660767
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  35660629 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 35660728  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||| | |||| ||||||||| ||||||||| ||||||    
T  35660729 agaaacggagaaacacataaatagagaggatcttaaccc 35660767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11775848 - 11775708
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttttt-caagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||     
T  11775848 aaaaaatagatggtggatcctaccactaagtgggtcccaccgtcattaattatattttactttttttcaagattttatgtgtttttatctctccaaattg 11775749  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaaccct 140  Q
    |||||||| |||| ||||||||||||||||||| |||||||    
T  11775748 aagaaatggagaaacacataaatggagaggatcttaaccct 11775708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 14349858 - 14349721
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| ||||||||||    
T  14349858 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaga-tttatgtgtctttatctttccaaattaa 14349760  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| |||||||||||||| |||| ||||||    
T  14349759 agaaatggagaaacacataaatggagaagatcttaaccc 14349721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 37266786 - 37266648
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| |    
T  37266786 aaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaattatattttagttttttcaagattttatgtgtctttatctctccaaattga 37266687  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| | || ||| ||||||||||||||||||||||    
T  37266686 agaaatggaaaaacacgtaaatggagaggatcctaaccc 37266648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 4592855 - 4592719
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||| |    
T  4592855 aaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattatattttacttttttcaatattttatgtg-tattatctctccaaattga 4592757  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaacc 138  Q
    ||||||| |||| |||||||||||||||||| ||||||    
T  4592756 agaaatggagaaacacataaatggagaggattctaacc 4592719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18625441 - 18625572
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| ||    
T  18625441 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatgaa 18625540  T
Q  101 agaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||  | || |||||||||||||||||||    
T  18625541 agaaattgaaaaacacataaatggagaggatc 18625572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 13032170 - 13032036
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||| ||||    
T  13032170 aaatagatggtgagtcctaccactaaatgggtcccaccatcattaattatattttattttttt-aagattttatgtgtctttatctctccaaattgaaga 13032072  T
Q  104 aatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||| |||| ||||||||||||||||||||||||||    
T  13032071 aatggagaaacacataaatggagaggatcctaaccc 13032036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 39902467 - 39902339
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| ||||    
T  39902467 aaatagatggtgggtcctaccactaaatggattccaccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattgaaga 39902368  T
Q  104 aatgaagaagcacataaatggagaggatc 132  Q
    |||| |||| |||||||||||||||||||    
T  39902367 aatggagaaacacataaatggagaggatc 39902339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 1475686 - 1475796
Alignment:
Q  29 agtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagag 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||||||| || |||||||||| ||||    
T  1475686 agtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatcactccaaattgaagaaatgaaaaaacacataaatgaagag 1475785  T
Q  129 gatcctaaccc 139  Q
    |||||||||||    
T  1475786 gatcctaaccc 1475796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 8440992 - 8441129
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaa 101  Q
    ||||||| |||||| | | |||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||| |     
T  8440992 aaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaattatattttactttttttaagattgtatgtgtatttatctctccaaattgat 8441091  T
Q  102 gaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||| | |||| |||||||||||||| |||||||||||    
T  8441092 gaaacggagaaacacataaatggagatgatcctaaccc 8441129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 34827247 - 34827109
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactt-ttttcaagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||  ||||  ||||||||| ||||||     
T  34827247 aaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaattatattttactttttttcaaaattt--tgtgtctttatctcttcaaattt 34827150  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaacccta 141  Q
    |||||||| | || || |||||||| ||||||||||||||||    
T  34827149 aagaaatgga-aaacatataaatggtgaggatcctaacccta 34827109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 10173985 - 10173867
Alignment:
Q  15 gggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagc 114  Q
    |||||||| |||||| ||||| | ||||||||||||||| ||||||||||||||| |||    |||  ||||||||||||||| || |||||| |||||     
T  10173985 gggtcctatcactaaatgggttctaccatcattaattattttttacttttttcaaaatt----gtgtctttatctctccaaatgaaggaaatggagaagg 10173890  T
Q  115 acataaatggagaggatcctaac 137  Q
    |||||||||||||||||| ||||    
T  10173889 acataaatggagaggatcttaac 10173867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 32793405 - 32793324
Alignment:
Q  25 actaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaat 106  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||  |  ||||||||| ||||| ||||||||    
T  32793405 actaagtaggtcccacaatcatcaattatattttacttttttcaagattttattcgtctttatctcttcaaatgaaagaaat 32793324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 3057174 - 3057310
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| |||||||| |||||| ||| ||  ||||||||||||||||||||||||| || | |||| |||  ||||||||| |||||  |    
T  3057174 aaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattatattttacttttttaaaaaatttaagtgtctttatctcttcaaataga 3057273  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaac 137  Q
    ||||||| |||   |||||| |||||| |||| ||||    
T  3057274 agaaatggagagagacataattggagaagatcttaac 3057310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36290657 - 36290593
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  36290657 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttacttttt 36290593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 28142807 - 28142870
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttac-ttttttcaagatttt 75  Q
    |||| |||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  28142807 gtggatcctaccattaagtgagtcccaccatcattaattatattttactttttttcaagatttt 28142870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 3041338 - 3041391
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 64  Q
    |||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||    
T  3041338 tggtgggtcctatcactaagcgggtcccaccatcattaattattttttattttt 3041391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 29341048 - 29340999
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaatta 52  Q
    |||||| || ||||||||||| | ||||||||||||||||||||||||||    
T  29341048 aaaatagatagtgggtcctactattaagtgggtcccaccatcattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41660161 - 41660100
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactt 62  Q
    ||||||||  |||||||||  | ||||| |||||||||||||||||||||||| ||||||||    
T  41660161 aaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattattttttactt 41660100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3057471 - 3057375
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    |||||| | ||| ||| ||||||||| ||||| || ||| ||||||||||||| || ||||||||||||  |||| ||||  |||||||||| ||||    
T  3057471 aaaaaaaagatgatggatcctaccacaaagtgagttccatcatcattaattattttatacttttttcaaacttttttgtgtctttatctctcaaaat 3057375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11960610 - 11960674
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||  | |||||||||| ||||||| ||||||||||| |||||||||||    
T  11960610 aaaaaataagtggtgggtctaatcactaagtggatcccaccttcattaattattttttacttttt 11960674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 43309113 - 43309061
Alignment:
Q  61 ttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaag 113  Q
    ||||||||||||||||||||  ||||||||| |||||| |||||||| |||||    
T  43309113 ttttttcaagattttatgtgtctttatctcttcaaattgaagaaatggagaag 43309061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 2984427 - 2984474
Alignment:
Q  18 tcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||| |||||| ||||||||||||||||||||||| ||||| |||||    
T  2984427 tcctatcactaaatgggtcccaccatcattaattattttttatttttt 2984474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 10362046 - 10362097
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 64  Q
    |||| |||||||| |||||||||| |||| ||||||||||| ||||||||||    
T  10362046 gtggatcctaccattaagtgggtctcaccgtcattaattattttttactttt 10362097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40162784 - 40162737
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  40162784 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 40162737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 16500549 - 16500484
Alignment:
Q  58 tacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatg 123  Q
    ||||||||||||  |||| |||| | |||||||||||||| ||||||||| ||| | |||||||||    
T  16500549 tacttttttcaaacttttttgtgttcttatctctccaaatgaaagaaatggagaggaacataaatg 16500484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 30355256 - 30355212
Alignment:
Q  68 aagattttatgtgcttttatctctccaaattaaagaaatgaagaa 112  Q
    |||||||| ||||  |||||||||||||||||||||||| |||||    
T  30355256 aagattttttgtgtctttatctctccaaattaaagaaataaagaa 30355212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43222181 - 43222129
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattat 53  Q
    |||||||| |||||||||| || || ||| ||| |||||||||||||||||||    
T  43222181 aaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaattat 43222129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 5e-56; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 30426689 - 30426827
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  30426689 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 30426788  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| | || ||||||||||||||||||||||||||    
T  30426789 agaaatggaaaaacacataaatggagaggatcctaaccc 30426827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 41511317 - 41511178
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  41511317 aaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaattatattttacttttttcaagattttatgtgtttttatctctccaaattga 41511218  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccct 140  Q
    ||||||| | || |||||||||||||||||||||||||||    
T  41511217 agaaatggaaaaacacataaatggagaggatcctaaccct 41511178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 36991408 - 36991273
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||||||||| ||||    
T  36991408 aaatagatgatgggtcctaccactaagtgggtcccaccatcattaattatatttgacttttttcaagattttacgtgtctttatctctccaaattgaaga 36991309  T
Q  104 aatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||| |||| |||||||||| |||||||||||||||    
T  36991308 aatggagaaacacataaatgaagaggatcctaaccc 36991273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 28069774 - 28069634
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||  |    
T  28069774 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatgga 28069675  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaacccta 141  Q
    ||||||  | || ||||||||||||||||||| | ||||||    
T  28069674 agaaattgaaaaacacataaatggagaggatcttcacccta 28069634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 10672532 - 10672670
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||| || |||||||||  ||||||||||||||||| |    
T  10672532 aaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaattatattttaccctttttaaaattttatgtatttttatctctccaaattga 10672631  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    | |||||||||| |||||||||| ||||||| |||||||    
T  10672632 ataaatgaagaaacacataaatgaagaggatactaaccc 10672670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 10652637 - 10652776
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttt-actttttt-caagattttatgtgcttttatctctccaaatt 98  Q
    |||||||  |||||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||    
T  10652637 aaaaaattgatggtgggtcatactactaattgggtcccaccatcattaattatatttttactttttttcaaaattttatgtg-ttttatctctccaaatt 10652735  T
Q  99 aaagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
     ||||||||||||| ||||||||||||||||||| ||||||    
T  10652736 gaagaaatgaagaaacacataaatggagaggatcttaaccc 10652776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 28318934 - 28319060
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaa 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||  ||| |||||||||||| |||||||| ||||    
T  28318934 gtgggtcctaccactaagtgggtccaaccatcattaattatattttactttttttaaaattttatgtgtctttgtctctccaaattgaagaaatggagaa 28319033  T
Q  113 gcacataaatggagaggatcctaaccc 139  Q
     ||| ||||||||||  ||||||||||    
T  28319034 acacgtaaatggagaaaatcctaaccc 28319060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 24102071 - 24101939
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||| |||  ||||||||||||||||||    
T  24102071 aaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattatatttcatttttttcaagattttacgtgtctttatctctccaaattaa 24101972  T
Q  101 agaaatgaagaagcacataaatggagaggatcc 133  Q
    | ||||  | || ||||||||||||||||||||    
T  24101971 aaaaatagaaaaacacataaatggagaggatcc 24101939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 40695267 - 40695404
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||   |||||| ||||||||| |    
T  40695267 aaaaaatagatggtaggtcctaccactaagtgagttccaccatcattagttatattttacttttttcaagattttatgtttctttatccctccaaattga 40695366  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaacc 138  Q
    ||||||| | ||  |||||||| | |||||||||||||    
T  40695367 agaaatggataaatacataaatagggaggatcctaacc 40695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 44859188 - 44859324
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaa 101  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||| | |||  |||||||||||||||||||    
T  44859188 aaaaatagatggtgggttctaccactaagtgggtcccaccatcattaattatattttattttttaaaaaatttcacgtgtctttatctctccaaattaaa 44859287  T
Q  102 gaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||| | | || ||| |||||||||| |||||||||||    
T  44859288 gaaaaggaaaaacacgtaaatggaga-gatcctaaccc 44859324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 8412294 - 8412179
Alignment:
Q  16 ggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagca 115  Q
    |||||||||||||||| | || ||||||| |||||||||||||||||||||||| ||||||||||  |||||||||| ||||  || ||||||||||  |    
T  8412294 ggtcctaccactaagtagatctcaccatcgttaattatattttacttttttcaatattttatgtgtatttatctctctaaatggaaaaaatgaagaaaaa 8412195  T
Q  116 cataaatggagaggat 131  Q
    ||||||||||||||||    
T  8412194 cataaatggagaggat 8412179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 45113321 - 45113195
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaa 104  Q
    |||| ||||||||||| ||||||||||| |||||| ||||||||||||| ||||| ||||||||| ||||||||||  | |||||||||||||   | ||    
T  45113321 aatagatggtgggtccaaccactaagtgtgtcccatcatcattaattattttttatttttttcaaaattttatgtgtctatatctctccaaatggtaaaa 45113222  T
Q  105 atgaagaagcacataaatggagaggat 131  Q
    ||||||||| | |||||||||||||||    
T  45113221 atgaagaaggatataaatggagaggat 45113195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 12177613 - 12177724
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||  ||   ||||||||  ||||| |||||||| |||| ||||||||| ||||||    
T  12177613 gtggatcccaccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacacataaatagagagg 12177712  T
Q  130 atcctaacccta 141  Q
    ||||||||||||    
T  12177713 atcctaacccta 12177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 12422041 - 12422152
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||  ||   ||||||||  ||||| |||||||| |||| ||||||||| ||||||    
T  12422041 gtggatcccaccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacacataaatagagagg 12422140  T
Q  130 atcctaacccta 141  Q
    ||||||||||||    
T  12422141 atcctaacccta 12422152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 27490028 - 27490162
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaag 102  Q
    |||||| || |||| ||||| ||||||||| |||  |  ||||||||||||||||||||||||||||||||||||||  |||| ||||| |||||  |||    
T  27490028 aaaataaattgtggatcctatcactaagtgagtctaaatatcattaattatattttacttttttcaagattttatgtatttttgtctcttcaaatggaag 27490127  T
Q  103 aaatgaagaagcacataaatggagaggatcctaac 137  Q
    ||||  ||||  ||||||||||||| |||| ||||    
T  27490128 aaattgagaaagacataaatggagaagatcttaac 27490162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26749568 - 26749632
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  || ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  26749568 aaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 26749632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 1937185 - 1937239
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  1937185 tggtgggtcctatcactaagcgggtcccaccatcattaattattttttacttttt 1937239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 5033091 - 5033023
Alignment:
Q  71 attttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||||||  |||||||||||||||| |||||||| |||| || |||||||||||||||| ||||||    
T  5033091 attttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcttaaccc 5033023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 30796331 - 30796269
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||| |||| ||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  30796331 aaaaataaatggcgggtc-tatcactaagtgggtcccaccatcattaattattttttacttttt 30796269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 37966505 - 37966583
Alignment:
Q  44 cattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaat 122  Q
    ||||||||||||||||||||||| ||  ||||||||   ||||||||||||||| ||||||||| ||||  ||||||||    
T  37966505 cattaattatattttactttttttaaatttttatgtatctttatctctccaaataaaagaaatggagaaagacataaat 37966583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34612619 - 34612562
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttt 58  Q
    ||||||||  |||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  34612619 aaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattatttttt 34612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 36748525 - 36748617
Alignment:
Q  15 gggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaaga 111  Q
    ||||||||||| ||||||| ||||||||||||||||  |||||||  ||||||||| || | ||||  |||||||||||||||  |||||| |||||    
T  36748525 gggtcctaccattaagtggatcccaccatcattaat--tatttta--tttttcaagcttctctgtgtctttatctctccaaatggaagaaaagaaga 36748617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21486978 - 21486926
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattat 53  Q
    ||||||||||| |||||| |||| | |||||| ||||||||||||||||||||    
T  21486978 aaaaaatatatagtgggttctactattaagtgagtcccaccatcattaattat 21486926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 24557214 - 24557266
Alignment:
Q  14 tgggtcctaccactaagtgggtcccaccatcattaattatattttactttttt 66  Q
    |||||||||||| |||||| |||||| ||||||||||||  ||||||||||||    
T  24557214 tgggtcctaccattaagtgagtcccatcatcattaattactttttactttttt 24557266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 6014234 - 6014127
Alignment:
Q  16 ggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagca 115  Q
    |||||||||| ||||||| ||| |  |||||||||||| |||||||||||| || | ||| ||||  | || ||||||||||   |||||| |||||| |    
T  6014234 ggtcctaccattaagtggatcctattatcattaattatgttttacttttttgaaaactttgtgtgtctatacctctccaaatggtagaaataaagaagga 6014135  T
Q  116 cataaatg 123  Q
    ||||||||    
T  6014134 cataaatg 6014127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17867680 - 17867727
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  17867680 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 17867727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 3763552 - 3763606
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||||||||| ||||||||| ||||| |||||||||   |||||||||||    
T  3763552 tggtgggtcctaccattaagtgggttccaccgtcattaattgctttttacttttt 3763606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 42761766 - 42761704
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||| || |||| |||||||||| ||||||| ||| ||||||||||||| ||||| |||||    
T  42761766 aaaatagatagtggatcctaccactcagtgggttccatcatcattaattattttttaattttt 42761704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6399979 - 6399914
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttttt 66  Q
    |||||||| |||||||||| ||  || |||||| |||||  |||||||||||| ||||||||||||    
T  6399979 aaaaaatagatggtgggtcttattaccaagtggatcccattatcattaattattttttactttttt 6399914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 24241705 - 24241672
Alignment:
Q  32 gggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||||||||||||||| |||||||||||    
T  24241705 gggtcccaccatcattaattattttttacttttt 24241672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 39143508 - 39143443
Alignment:
Q  72 ttttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaac 137  Q
    |||| |||| ||||| |||||||||| ||||||||| ||||  |||| |||| |||||||||||||    
T  39143508 ttttttgtgtttttacctctccaaataaaagaaatggagaaaaacattaatgaagaggatcctaac 39143443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 16999806 - 16999758
Alignment:
Q  83 tttatctctccaaattaaagaaatgaagaagcacataaatggagaggat 131  Q
    ||||||||||||||  |||||||| |||| ||| |||||||||||||||    
T  16999806 tttatctctccaaaagaaagaaataaagatgcatataaatggagaggat 16999758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 208118 - 207980
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |    
T  208118 aaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattga 208019  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  208018 agaaatggagaaacacataaatggagaggatcctaaccc 207980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 1249166 - 1249304
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| |    
T  1249166 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctttccaaattga 1249265  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||||||||||||| ||||||    
T  1249266 agaaatggagaaacacataaatggagaggatcttaaccc 1249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 4804503 - 4804365
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |    
T  4804503 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattga 4804404  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| || |||||||||||||||||||||||    
T  4804403 agaaatggagaaacatataaatggagaggatcctaaccc 4804365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 29698218 - 29698080
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| |    
T  29698218 aaaaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatttctccaaattga 29698119  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  29698118 agaaatggagaaacacataaatggagaggatcctaaccc 29698080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 7162136 - 7162001
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  7162136 aaatagatggtgggtcctactactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaga 7162037  T
Q  104 aatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||| |||| ||| ||||| ||||||||||||||||    
T  7162036 aatggagaaacacgtaaatagagaggatcctaaccc 7162001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 21159389 - 21159523
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| |    
T  21159389 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatatctccaaattga 21159488  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |    |||||||| |||||||||||||||||    
T  21159489 agaaatgga----cacataaacggagaggatcctaaccc 21159523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 17944217 - 17944106
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |    
T  17944217 aaaaaatagatggtaggtcctaccactaaatgggtcccaccatcattaattatattttactttttccaagattttatgtgtttttatctctccaaattga 17944118  T
Q  101 agaaatgaagaa 112  Q
    ||||||| ||||    
T  17944117 agaaatggagaa 17944106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 12412689 - 12412586
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  12412689 aaatagatggtgggtcctaccactaagtgggttccaccatcattaattatattttacttttttcaaaattttatgtatttttatctctccaaattgaaga 12412590  T
Q  104 aatg 107  Q
    ||||    
T  12412589 aatg 12412586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 32737900 - 32737791
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||| |||| || |||||||||||||    
T  32737900 gtgggttccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagagg 32737801  T
Q  130 atcctaaccc 139  Q
    ||||||||||    
T  32737800 atcctaaccc 32737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27826593 - 27826462
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||  |||||||||  |||||||||| ||||  |    
T  27826593 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttattttttaaaattttttatgtgtctttatctctcaaaatgga 27826494  T
Q  101 agaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||  |||| |||||||||||||||||||    
T  27826493 agaaattgagaaacacataaatggagaggatc 27826462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 13089769 - 13089899
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| |||         ||||| |    
T  13089769 aaaatatagatggtgggtcctaccactaagtgggccccaccatcattaattatattttatttttttcaaaattttatgtgtttt---------aaattga 13089859  T
Q  101 agaaatg-aagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| ||||| |||||||||| |||||||||||||||    
T  13089860 agaaatgaaagaaacacataaatgaagaggatcctaaccc 13089899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 227588 - 227714
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaa 104  Q
    |||| |||||||||||||||||||||||| ||||| ||||||| ||||| |||||| |||||||| | ||| ||||  | ||||||||||||||  ||||    
T  227588 aatagatggtgggtcctaccactaagtggatcccatcatcattgattattttttacctttttcaaaactttgtgtgtctatatctctccaaattgtagaa 227687  T
Q  105 atgaagaagcacataaatggagaggat 131  Q
    ||| ||||||||||||||| |||||||    
T  227688 atggagaagcacataaatgaagaggat 227714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 30460858 - 30460764
Alignment:
Q  18 tcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaa 112  Q
    |||||||| ||| || ||||| || | ||||||||||||||||||||||||||||||||||||  |||||||||||||||  |||||||||||||    
T  30460858 tcctaccattaaatgagtcccgccgttattaattatattttacttttttcaagattttatgtgtctttatctctccaaatagaagaaatgaagaa 30460764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24484934 - 24484870
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  24484934 aaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 24484870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 1518327 - 1518405
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatga 108  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||||  ||||||| | ||||| ||||||||||    
T  1518327 gtggatcccaccatcattaattatattttactttttttaaaattttatgtgtatttatcttttcaaatgaaagaaatga 1518405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 1516238 - 1516314
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaat 106  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||||||  ||||||| | ||||| ||||||||    
T  1516238 gtggatcccaccatcattaattatattttactttttttaaaattttatgtgtatttatcttttcaaatgaaagaaat 1516314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 2800633 - 2800727
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    |||||| || |||| || ||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||| || | || |||||||||||||    
T  2800633 aaaatagatagtggatcataccattaagtgggtcccaccatcattgattattttttacttttttcaattttttttgagtttatatctctccaaat 2800727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 7215874 - 7215936
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||| || ||||||||||||||||| |||||||||| |||||||||||  |||||||||||    
T  7215874 aaaatagatagtgggtcctaccactaattgggtcccactatcattaattacgttttacttttt 7215936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 2720411 - 2720376
Alignment:
Q  18 tcctaccactaagtgggtcccaccatcattaattat 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  2720411 tcctaccactaagtgggtcccaccatcattaattat 2720376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2142313 - 2142377
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||| | || || |||||| ||||||||||||||||| |||||||||||    
T  2142313 aaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaattattttttacttttt 2142377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 13888547 - 13888603
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttact 61  Q
    |||| ||||||| |||||||| ||| ||||||||| ||||||||||||| |||||||    
T  13888547 aatagatggtggttcctaccattaactgggtcccatcatcattaattattttttact 13888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7098216 - 7098263
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  7098216 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 7098263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 13888617 - 13888663
Alignment:
Q  85 tatctctccaaattaaagaaatgaagaagcacataaatggagaggat 131  Q
    |||||||||||||   ||||||||||||| |||||||||||||||||    
T  13888617 tatctctccaaatggtagaaatgaagaaggacataaatggagaggat 13888663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32254061 - 32254115
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||||| || |||||| ||||||| |||||||||||| ||||| |||||    
T  32254061 tggtgggtcctatcattaagtgagtcccactatcattaattattttttatttttt 32254115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 1515573 - 1515609
Alignment:
Q  30 gtgggtcccaccatcattaattatattttactttttt 66  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  1515573 gtggatcccaccgtcattaattatattttactttttt 1515609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 11180472 - 11180512
Alignment:
Q  25 actaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||| | ||||||||||||||||| |||||||||||    
T  11180472 actaagtggattccaccatcattaattattttttacttttt 11180512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 17398774 - 17398810
Alignment:
Q  61 ttttttcaagattttatgtgcttttatctctccaaat 97  Q
    ||||||||||||||||||||  |||||||||||||||    
T  17398774 ttttttcaagattttatgtgtctttatctctccaaat 17398810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 12380930 - 12381068
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  12380930 aaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 12381029  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  12381030 agaaatggagaaacacataaatggagaggatcctaaccc 12381068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 12384997 - 12385135
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  12384997 aaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 12385096  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  12385097 agaaatggagaaacacataaatggagaggatcctaaccc 12385135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 50484441 - 50484303
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  50484441 aaaaaatagatggtgggtacaaccactaagtgggtcccaccgtcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattaa 50484342  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||||||||||||| ||||||    
T  50484341 agaaatggagaaacacataaatggagaggatcttaaccc 50484303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 12151822 - 12151684
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  12151822 aaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 12151723  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    | ||||| |||| ||||||||||| ||||||| ||||||    
T  12151722 ataaatggagaaacacataaatggggaggatcttaaccc 12151684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 40328332 - 40328193
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactt-ttttcaagattttatgtg-cttttatctctccaaatta 99  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  40328332 aaaaatagatggtgggtcccaccactaagtgggttccaccatcattagttatattttactttttttcaagattttatgtgtcttttatctctccaaatta 40328233  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||||||||| |||||||||| |||||||| ||||||    
T  40328232 aagaaatgaagaaacacataaatgaagaggatcttaaccc 40328193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 50294083 - 50294211
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||  |    
T  50294083 aaaaaatagatggtgggtcctaccactaagtggatcctaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatgga 50294182  T
Q  101 agaaatgaagaagcacataaatggagagg 129  Q
    ||||||  |||| ||| ||||||||||||    
T  50294183 agaaattgagaaacacgtaaatggagagg 50294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 45978048 - 45977939
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||    
T  45978048 gtgggtcccagcatcgttaattatattttatttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagg 45977949  T
Q  130 atcctaaccc 139  Q
    ||||||||||    
T  45977948 atcctaaccc 45977939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 7841763 - 7841868
Alignment:
Q  34 gtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcc 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| | || || |||||||||||| ||||    
T  7841763 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacatataaatggagagaatcc 7841862  T
Q  134 taaccc 139  Q
    ||||||    
T  7841863 taaccc 7841868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 48327174 - 48327312
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt-ttcaagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| | ||||| |||||||||      
T  48327174 aaaaaatagatggtgagtcctaccactaagtgggtcc-accatcattaattatattttattttttttcaagattttatgtacctttatatctccaaatgg 48327272  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||||  | || ||||||||||||||||||| ||||||    
T  48327273 aagaaattgataaacacataaatggagaggatcttaaccc 48327312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 23861992 - 23862116
Alignment:
Q  18 tcctaccactaagtgggtcccaccatcattaattatatttta-cttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcac 116  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| |||||||| |||||||  |||| |||    
T  23861992 tcctaccactaagtggatcccaccatcattaattatattttattttttttcaagattttatgtgtctttatctttccaaattgaagaaatagagaaacac 23862091  T
Q  117 ataaatggagaggatcctaacccta 141  Q
    || |||| ||||||| |||||||||    
T  23862092 atgaatgaagaggattctaacccta 23862116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 2845289 - 2845189
Alignment:
Q  33 ggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaatt-aaagaaatgaagaagcacataaatggagaggat 131  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| ||||  |||||||||||||||| | ||||||  ||||  |||||||||||||||||    
T  2845289 ggtcccaccatcattaattatattttactattttcaaaattttgtgtgtatttatctctccaaattgatagaaatagagaaaaacataaatggagaggat 2845190  T
Q  132 c 132  Q
    |    
T  2845189 c 2845189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 18976329 - 18976452
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaa 104  Q
    |||| ||||||| ||| |||| ||||| ||||||| ||||||||||||| ||||| ||||||||| ||||| |||  || |||||||||||||   ||||    
T  18976329 aatagatggtggatccaaccattaagtaggtcccatcatcattaattat-ttttatttttttcaaaattttgtgt--ttatatctctccaaatggtagaa 18976425  T
Q  105 atgaagaagcacataaatggagaggat 131  Q
    ||||||||| |||||||||||||||||    
T  18976426 atgaagaaggacataaatggagaggat 18976452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 46608409 - 46608523
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaa 112  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | ||  ||||  ||||| |||||||||  |||||||   | |    
T  46608409 gtgggtcctaccactaagtgggacccaccatcattaattattttttacttttttcaaaactt--tgtgtctttatttctccaaatggaagaaat---gga 46608503  T
Q  113 gcacataaatggagaggatc 132  Q
    | ||||||||||||||||||    
T  46608504 ggacataaatggagaggatc 46608523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24977295 - 24977189
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttta-cttttttcaagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| ||||||| |||||||||||||||||| |||| ||||||| ||||||||||  ||||||||||||||||| ||  |||||||||| ||||      
T  24977295 aaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttatattttattttttttcaagattttat-tgtatttatctctctaaatgt 24977197  T
Q  100 aagaaatg 107  Q
    ||||||||    
T  24977196 aagaaatg 24977189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 23916124 - 23916013
Alignment:
Q  18 tcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcaca 117  Q
    ||||||||||| |||||||||||||||||||||||| ||  ||||||||||| ||||| |||| |||||| ||||||||| ||| ||||| ||||  | |    
T  23916124 tcctaccactacgtgggtcccaccatcattaattattttaaacttttttcaa-atttt-tgtgtttttatatctccaaatgaaataaatggagaaaaata 23916027  T
Q  118 taaatggagaggat 131  Q
     |||||||||||||    
T  23916026 caaatggagaggat 23916013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 5047418 - 5047536
Alignment:
Q  18 tcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaaga-agcac 116  Q
    ||||||||||| |||||||||||||||||||||||| || || |||||||||  |||| ||||| |||||||||| ||||  |||||||| ||| || |     
T  5047418 tcctaccactatgtgggtcccaccatcattaattattttata-ttttttcaaacttttttgtgcctttatctctctaaatggaagaaatggagatagta- 5047515  T
Q  117 ataaatggagaggatcctaac 137  Q
    |||||||||||||||| ||||    
T  5047516 ataaatggagaggatcttaac 5047536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52280059 - 52280123
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  52280059 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttacttttt 52280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 39426263 - 39426201
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||| || ||||||||||||||||| |||||||||| |||||||||||| |||||||||||    
T  39426263 aaaatagatagtgggtcctaccactaattgggtcccactatcattaattattttttacttttt 39426201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 35977930 - 35977883
Alignment:
Q  92 ccaaattaaagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||    
T  35977930 ccaaattaaagaaatgaataaacacataaatggagaggatcctaaccc 35977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30077664 - 30077728
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||| ||| ||||||||| ||||||| |||||||||||| |||||||||||    
T  30077664 aaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattattttttacttttt 30077728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 32887802 - 32887906
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaag 102  Q
    |||||| || |||| |||||||| ||| ||||||||||||||||||||||| ||  | |||||||||  |||| || |  | ||||||||||||| ||||    
T  32887802 aaaataaatagtggatcctaccattaaatgggtcccaccatcattaattattttcaatttttttcaaacttttttgagtctatatctctccaaatgaaag 32887901  T
Q  103 aaatg 107  Q
    |||||    
T  32887902 aaatg 32887906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 26372290 - 26372243
Alignment:
Q  18 tcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||    
T  26372290 tcctaccattaagtgggtcccaccaccattaattattttttacttttt 26372243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 26860072 - 26860134
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||| || || ||||||| |||||||||| |||||| |||||||||||| |||||||||||    
T  26860072 aaaatagatagtaggtcctatcactaagtggatcccacaatcattaattattttttacttttt 26860134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 44483810 - 44483687
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatatttta-cttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaaga 111  Q
    ||||||||||||| ||| ||| | ||||||||||||||||| |||||  ||||||||| |  || ||||  ||||||||| |||||  |||||||| |||    
T  44483810 gtgggtcctaccattaaatggattccaccatcattaattattttttattttttttcaaaa--ttgtgtgtctttatctcttcaaatgcaagaaatggaga 44483713  T
Q  112 agcacataaatggagaggatcctaac 137  Q
    ||  ||||||||| || |||||||||    
T  44483712 aggtcataaatggggaagatcctaac 44483687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 10646898 - 10646833
Alignment:
Q  72 ttttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaac 137  Q
    ||||||||| |||||||||| ||||||||| ||||||| ||  |||||||||||||| ||| ||||    
T  10646898 ttttatgtgtttttatctcttcaaattaaacaaatgaaaaaagacataaatggagagaatcttaac 10646833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 45970861 - 45970796
Alignment:
Q  41 catcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaat 106  Q
    ||||||||||||| ||||||||||||||| ||||| ||||  ||||||||| ||||| ||| ||||    
T  45970861 catcattaattattttttacttttttcaaaattttgtgtgtctttatctcttcaaatgaaaaaaat 45970796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7845043 - 7844975
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaa 69  Q
    |||||||| ||  ||| ||||||||||||||| |||||||||| ||||||||  || ||||||||||||    
T  7845043 aaaaaatagatattggatcctaccactaagtgtgtcccaccattattaattagtttatacttttttcaa 7844975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24413302 - 24413354
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattat 53  Q
    |||||||  ||||||||||||| || ||| |||||||||||||||||||||||    
T  24413302 aaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattat 24413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 19910583 - 19910511
Alignment:
Q  24 cactaagtgggtcccaccatcattaattatatttta-cttttttcaagattttatgtgcttttatctctccaaat 97  Q
    ||||| |||||||  ||||| |||||||||||||||  ||||||||| ||||||||||  |||||||||||||||    
T  19910583 cactaggtgggtcataccattattaattatattttattttttttcaaaattttatgtg--tttatctctccaaat 19910511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6948850 - 6948899
Alignment:
Q  1 aaaaaatata--tggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  6948850 aaaaaatataagtggtgggtcctatcactaagtggatcccaccatcatta 6948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26768940 - 26768886
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||| ||| || |||||| ||| |||||||||||||||| |||||||||||    
T  26768940 tggtgggttctatcattaagtgagtctcaccatcattaattattttttacttttt 26768886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 40988723 - 40988674
Alignment:
Q  48 aattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    |||||| ||||||||||||||| ||||| ||||  |||||||||||||||    
T  40988723 aattattttttacttttttcaaaattttgtgtgtctttatctctccaaat 40988674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 46045726 - 46045678
Alignment:
Q  17 gtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||| |||||||||  ||||||||||||||||||| ||| |||||||    
T  46045726 gtcctatcactaagtgtatcccaccatcattaattatttttcacttttt 46045678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 8e-52; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 5763182 - 5763321
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |    
T  5763182 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattga 5763281  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccct 140  Q
    ||||||| |||| || ||||||||||| ||||||||||||    
T  5763282 agaaatggagaaacatataaatggagatgatcctaaccct 5763321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 12241440 - 12241567
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| ||||    
T  12241440 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaa 12241539  T
Q  113 gcacataaatggagaggatcctaaccct 140  Q
     |||||||||| ||||||||||||||||    
T  12241540 acacataaatgaagaggatcctaaccct 12241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 19901938 - 19902076
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |    
T  19901938 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattga 19902037  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||  |||| ||||||||||||||||||| ||||||    
T  19902038 agaaatagagaaacacataaatggagaggatcttaaccc 19902076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 34778476 - 34778338
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| |    
T  34778476 aaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccacattga 34778377  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| |||||||||||||||||| |||||||    
T  34778376 agaaatggagaaacacataaatggagaggattctaaccc 34778338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 56558334 - 56558194
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |    
T  56558334 aaaaaatagatggtgggtcctatcactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattga 56558235  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaacccta 141  Q
    ||||||  |||| || |||||||||||||||||||||||||    
T  56558234 agaaatagagaaacatataaatggagaggatcctaacccta 56558194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 18207060 - 18207199
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||| |    
T  18207060 aaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattatattttacctttttcaagattttatgtgtctttatctttccaaattga 18207159  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccct 140  Q
    ||||||  |||| |||||||||||||||||||||||||||    
T  18207160 agaaattgagaaacacataaatggagaggatcctaaccct 18207199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 23610697 - 23610559
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| |    
T  23610697 aaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaaatatattttacttttttcaagattttatgtatctttatctctccaaattga 23610598  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| || |||||||||||||||| ||||||    
T  23610597 agaaatggagaaacatataaatggagaggatcttaaccc 23610559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 3952190 - 3952309
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  3952190 aaaaaatagatggtgggtcctaccactaagtgggtctcaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 3952289  T
Q  101 agaaatgaagaagcacataa 120  Q
    ||||||| |||| |||||||    
T  3952290 agaaatggagaaacacataa 3952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 12153197 - 12153087
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||| |||| ||||||||||||||||    
T  12153197 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagg 12153098  T
Q  130 atcctaaccct 140  Q
    |||||||||||    
T  12153097 atcctaaccct 12153087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 5416486 - 5416625
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttac--ttttttcaagattttatgtgcttttatctctccaaatta 99  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||  ||||||| ||||||||     
T  5416486 aaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttttaaagattttatgtgtctttatctgtccaaattg 5416585  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||||| |||| ||||||||| |||||||| |||||||    
T  5416586 aagaaatggagaaacacataaattgagaggattctaaccc 5416625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 33247153 - 33247286
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||  |||||||||||  |||||||||||||||| ||||    
T  33247153 aaatagatggtgggttctaccactaaatgggttccaccatcattaattatattttatttttttc--gattttatgtgtctttatctctccaaattgaaga 33247250  T
Q  104 aatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||| |||| ||||||||||||||||||||||||||    
T  33247251 aatggagaaacacataaatggagaggatcctaaccc 33247286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 38079743 - 38079871
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| || |    
T  38079743 aaatagatggtgggtcctactactaagtggattccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaaa 38079842  T
Q  104 aatgaagaagcacataaatggagaggatc 132  Q
    |||| |||| | |||||||||||||||||    
T  38079843 aatggagaaacgcataaatggagaggatc 38079871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 52018795 - 52018699
Alignment:
Q  44 cattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaaccct 140  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  52018795 cattaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccct 52018699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 39862572 - 39862434
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||| |||||| |||||| || || |||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |    
T  39862572 aaaaaatagatggtgtgtcctatcactaaatgagttccaccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattga 39862473  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||   |||| |||||||||| |||||||||||||||    
T  39862472 agaaaatgagaaacacataaatgaagaggatcctaaccc 39862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 47922095 - 47922233
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || ||||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||| |||||| |||  |||||||||| ||||| |    
T  47922095 aaaaaatagatagtgggtcttaccactaagtgggttccaccatcattaaatatattttatttttttcaatattttacgtgtctttatctctctaaattga 47922194  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||| ||||||||||||||||    
T  47922195 agaaatggagaaacacataaattgagaggatcctaaccc 47922233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 132
Target Start/End: Complemental strand, 24073668 - 24073541
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||||||| || ||||||||||||  ||||    
T  24073668 aaatagatggtgggtcctaccactaagtgggtcccgccatcattaattatatattt-ttttttcaagattttatgtgccttcatctctccaaatggaaga 24073570  T
Q  104 aatgaagaagcacataaatggagaggatc 132  Q
    |||  |||| |||||||||||||||||||    
T  24073569 aattgagaaacacataaatggagaggatc 24073541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 33262572 - 33262699
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| || ||||||||||  |||||||||||||||| |    
T  33262572 aaaaaatagatggtggatcctaccactaaataggtcccaccatcattaattatattttactttttttaaaattttatgtgtctttatctctccaaattga 33262671  T
Q  101 agaaatgaagaagcacataaatggagag 128  Q
    ||||||  | ||  ||||||||||||||    
T  33262672 agaaatagaaaaatacataaatggagag 33262699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 17080697 - 17080798
Alignment:
Q  38 caccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaac 137  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||  |||||||||||||||| |||||||| |||| ||||||||||||| ||||||||||    
T  17080697 caccatcattcattatattttactttttccaagattttatctgtctttatctctccaaattgaagaaatggagaaacacataaatggaggggatcctaac 17080796  T
Q  138 cc 139  Q
    ||    
T  17080797 cc 17080798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 30567956 - 30567859
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaatt 98  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||  ||||||| || |||||    
T  30567956 aaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaattatattttacttttttcaaaattttatgtgtctttatctatcaaaatt 30567859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 3326559 - 3326435
Alignment:
Q  14 tgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtg-cttttatctctccaaattaaagaaatgaagaa 112  Q
    |||||| ||||| ||| ||||| ||||||| ||||||||| ||||||||||||||| | ||| | || |||||||||||| |||||||||||||| || |    
T  3326559 tgggtcataccattaaatgggttccaccattattaattattttttacttttttcaaaactttttttgtcttttatctctcaaaattaaagaaatggagga 3326460  T
Q  113 gcacataaatggagaggatcctaac 137  Q
    | |||||||||||||||||| ||||    
T  3326459 ggacataaatggagaggatcttaac 3326435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12312496 - 12312572
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttat 77  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||    
T  12312496 aaaaaatagatggtggatcctaccactaagtgggtcccatcatcattaattatattttactttctttaagattttat 12312572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 131
Target Start/End: Original strand, 31862249 - 31862370
Alignment:
Q  10 atggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaa 109  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||  || ||||| ||||  | |||||||||||||   ||||||  |    
T  31862249 atggtggatcctaccactaagtgggtcccaccatcattaattattttttactttttctaaaattttgtgtgtctatatctctccaaatggtagaaataga 31862348  T
Q  110 gaagcacataaatggagaggat 131  Q
    |||| | |||||| ||||||||    
T  31862349 gaaggatataaattgagaggat 31862370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 12312571 - 12312650
Alignment:
Q  49 attatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagag 128  Q
    ||||||||||||||||||||| ||||||||||  |||||||||| ||||| |||||||| |||| |||||||||||||||    
T  12312571 attatattttacttttttcaaaattttatgtgtctttatctctctaaattgaagaaatggagaaacacataaatggagag 12312650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 25442194 - 25442331
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttt-acttttttcaagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| || ||||||||||||||||||||| || ||||  |||||||||| |||| |||||||| |  ||| | ||||  |||||||||||||||      
T  25442194 aaaaaatagattgtgggtcctaccactaagtggatctcaccgacattaattattttttaactttttttataattgtgtgtgtctttatctctccaaatgg 25442293  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaac 137  Q
    |||||||| |||||  ||||||||||||||||| ||||    
T  25442294 aagaaatggagaaggccataaatggagaggatcttaac 25442331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 47922391 - 47922517
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaa 104  Q
    |||| |||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||| | ||| |||| || |||| || |||||   ||||    
T  47922391 aatagatggtgggtcctaccactaagtgggtcccatcatctataattattttttacttttttcaaaactttgtgtgtttatatcactacaaatggtagaa 47922490  T
Q  105 atgaagaagcacataaatggagaggat 131  Q
    ||| | ||  | |||||||||||||||    
T  47922491 atggataaagaaataaatggagaggat 47922517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 56269096 - 56269153
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttt 58  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  56269096 aaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttt 56269153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5524502 - 5524438
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  5524502 aaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattattttttacttttt 5524438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 48084555 - 48084609
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||    
T  48084555 tggtgggttctagcactaagtgggtcccaccatcattaattattttttacttttt 48084609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37002271 - 37002335
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||| |||||  ||||||||||||||||||||||||||||| |||||||||||    
T  37002271 aaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattattttttacttttt 37002335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42010172 - 42010108
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  ||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  42010172 aaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt 42010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 56453840 - 56453904
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||||| || ||||||||||||||||||||| ||||| |||||||||||    
T  56453840 aaaaaataggtggtgggtcctatcattaagtgggtcccaccatcattcattattttttacttttt 56453904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 43447638 - 43447704
Alignment:
Q  39 accatcattaattatattttacttttttcaaga-ttttatgtgcttttatctctccaaattaaagaa 104  Q
    ||||||||||||||||||||||||||||||| | |||||||||  |||||||||| |||| ||||||    
T  43447638 accatcattaattatattttacttttttcaaaatttttatgtgtctttatctctcgaaataaaagaa 43447704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 23474164 - 23474070
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    |||||| |||||||||||||| | | ||||  ||||||||||||||||||  ||||| |||||| ||  |||| |||| || |||||||||||||    
T  23474164 aaaatagatggtgggtcctactattgagtgaatcccaccatcattaattactttttaattttttgaattttttgtgtgtttatatctctccaaat 23474070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 33841854 - 33841920
Alignment:
Q  31 tgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    |||||||||||||||||||||||  | |||| ||||||||||||| ||||  ||||||| |||||||    
T  33841854 tgggtcccaccatcattaattattgtatactcttttcaagattttttgtgtctttatctttccaaat 33841920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 1871320 - 1871228
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaat 106  Q
    |||| |||||| ||||||||||||||| ||||||||||||| || || |||||||||  || | ||||  ||||||||||||||| ||| ||||    
T  1871320 gtggatcctactactaagtgggtcccatcatcattaattattttata-ttttttcaaatttctttgtgtctttatctctccaaataaaaaaaat 1871228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 26428650 - 26428574
Alignment:
Q  49 attatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatgga 125  Q
    ||||| ||||||||||||||| | ||| ||||  | ||||||||||||||  ||||||| ||||| |||||||||||    
T  26428650 attattttttacttttttcaaaaatttgtgtgtctatatctctccaaattgtagaaatggagaaggacataaatgga 26428574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 36688224 - 36688260
Alignment:
Q  17 gtcctaccactaagtgggtcccaccatcattaattat 53  Q
    |||||| ||||||||||||||||||||||||||||||    
T  36688224 gtcctatcactaagtgggtcccaccatcattaattat 36688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25219050 - 25219003
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  25219050 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 25219003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32146557 - 32146510
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  32146557 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 32146510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 46239021 - 46238974
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  46239021 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 46238974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 47834607 - 47834572
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||||||||||||||||| |||||||||||    
T  47834607 gtgggtcccaccatcattaattattttttacttttt 47834572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 53526143 - 53526096
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  53526143 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 53526096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 55160391 - 55160438
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  55160391 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 55160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 5361469 - 5361435
Alignment:
Q  30 gtgggtcccaccatcattaattatattttactttt 64  Q
    |||||||||||||||||||||||| ||||||||||    
T  5361469 gtgggtcccaccatcattaattattttttactttt 5361435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 46804671 - 46804621
Alignment:
Q  16 ggtcctaccactaagtgggtcccaccatcattaattatattttactttttt 66  Q
    |||||||||| ||||||||||| || |||||||||||  ||||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaattactttttactttttt 46804621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1015874 - 1015931
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttt 58  Q
    ||||||||  |||||||||| | || || |||||||||||||||||||||||| ||||    
T  1015874 aaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattatttttt 1015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 4404333 - 4404281
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||| || |||||| ||| |||||||||||||||  |||||||||||    
T  4404333 gtgggtcctatcattaagtgtgtctcaccatcattaattaatttttacttttt 4404281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28701855 - 28701907
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattat 53  Q
    ||||||||  |||||||||  | ||||||||||||| ||||||||||||||||    
T  28701855 aaaaaataagtggtgggtcaaatcactaagtgggtctcaccatcattaattat 28701907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 52030726 - 52030766
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattat 53  Q
    |||| |||||| | |||||||||||||||||||||||||||    
T  52030726 gtggatcctacaaataagtgggtcccaccatcattaattat 52030766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 8e-52; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 35316880 - 35316741
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |    
T  35316880 aaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatatgtctttatctctccaaattga 35316781  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccct 140  Q
    ||||||| |||| ||| |||||||||||||||||||||||    
T  35316780 agaaatggagaaacacgtaaatggagaggatcctaaccct 35316741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 28564947 - 28564815
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttttt-caagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||||||||     
T  28564947 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttaaaagattttatgtgtctttatctctccaaattg 28564848  T
Q  100 aagaaatgaagaagcacataaatggagaggatc 132  Q
    |||||||| |||| |||||||||||||||||||    
T  28564847 aagaaatggagaaacacataaatggagaggatc 28564815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13238736 - 13238605
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| |    
T  13238736 aaaaaatagatggtgggtcctaccaccaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaattga 13238637  T
Q  101 agaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||  |||| | |||||||||||||||||    
T  13238636 agaaattgagaaacgcataaatggagaggatc 13238605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 39465801 - 39465699
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| ||||||||||||||||    
T  39465801 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaaaaaatggagaaacacataaatggagagg 39465702  T
Q  130 atc 132  Q
    |||    
T  39465701 atc 39465699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23259507 - 23259646
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    ||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||  |||||| ||| ||||| |    
T  23259507 aaaaaatagctggtgggtcctactactaagtggatcccaccatcattaattatattttactttttttaagattttatatgtctttatccctcaaaattga 23259606  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccct 140  Q
    |||||||||||| |  ||||||| ||| ||| ||||||||    
T  23259607 agaaatgaagaaacgtataaatgaagatgattctaaccct 23259646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 41983401 - 41983497
Alignment:
Q  42 atcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  41983401 atcattaattatattttacttttttcaagattt-atgtgtctttatctctccaaattaaagaaatggagaaacacataaatggagaggatcttaaccc 41983497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 374499 - 374585
Alignment:
Q  42 atcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagag 128  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| | |||| |||||||||||||||    
T  374499 atcattaattatattttacttttttcaagattttatgtgtttttatctctctaaatgaaagaaagggagaaacacataaatggagag 374585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 35 - 139
Target Start/End: Complemental strand, 10877724 - 10877619
Alignment:
Q  35 tcccaccatcattaattatattttacttttttca--agattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||||||||||||||||||| | ||||||    | |||||||||| ||||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  10877724 tcccaccatcattaattatatttcatttttttttttaaattttatgtg-ttttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 10877626  T
Q  133 ctaaccc 139  Q
    |||||||    
T  10877625 ctaaccc 10877619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 45625111 - 45625216
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||| |||  |||||||||| ||||| |||||||| |||| |||||     ||||||    
T  45625111 gtgggtcccaccatcattaattttattttatatttttcaagattttacgtgtctttatctctctaaattgaagaaatggagaaacacatt----gagagg 45625206  T
Q  130 atcctaaccc 139  Q
    ||||||||||    
T  45625207 atcctaaccc 45625216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 375048 - 374984
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  375048 aaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttacttttt 374984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 21454515 - 21454582
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaa 69  Q
    ||||||| || ||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  21454515 aaaaatagattgtgggtcataccattaagtgggttccaccatcattaattattttttacttttttcaa 21454582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23459866 - 23459930
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  ||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  23459866 aaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt 23459930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 30709152 - 30709100
Alignment:
Q  14 tgggtcctaccactaagtgggtcccaccatcattaattatattttactttttt 66  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  30709152 tgggtcctaccactaagtggatcccaccatcattaattgttttttactttttt 30709100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 2061382 - 2061296
Alignment:
Q  51 tatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaac 137  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||  |||||||  |||  |  |||||||||||||||| ||||    
T  2061382 tatattttacttttttcaagattttatgcgtctttatctctccaaatggaagaaattgagatactaataaatggagaggatcttaac 2061296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 12949494 - 12949429
Alignment:
Q  31 tgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    |||||||| || ||||||||||| |||||||||||||||||||||||||   |||||||||||||||    
T  12949494 tgggtcccgccgtcattaattat-ttttacttttttcaagattttatgtatctttatctctccaaat 12949429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 29188698 - 29188644
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||| |||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  29188698 tggtgcgtcctatcactaagcgggtcccaccatcattaattattttttacttttt 29188644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 8988895 - 8988847
Alignment:
Q  16 ggtcctaccactaagtgggtcccaccatcattaattatattttactttt 64  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  8988895 ggtcctatcactaagtgggtcccaccatcattaattattttttattttt 8988847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 2063393 - 2063343
Alignment:
Q  16 ggtcctaccactaagtgggtcccaccatcattaattatattttactttttt 66  Q
    ||||||||||| |||||||| |||||||||||||| ||||| |||||||||    
T  2063393 ggtcctaccaccaagtgggttccaccatcattaataatattatactttttt 2063343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 11864912 - 11864856
Alignment:
Q  21 taccactaagtgggtcccaccatcattaattatattttacttttttcaagattttat 77  Q
    ||||||||| || ||| |||||||||  ||||||||||||||||| |||||||||||    
T  11864912 taccactaaatgagtctcaccatcatggattatattttactttttccaagattttat 11864856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30840935 - 30840872
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||||| ||||||||| ||| |||||| ||||||||| |||||||||||    
T  30840935 aaaaaataagtggtgggtcctatcactaagtgagtctcaccat-attaattattttttacttttt 30840872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 3354812 - 3354847
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||||||||||||||||| |||||||||||    
T  3354812 gtgggtcccaccatcattaattattttttacttttt 3354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13780553 - 13780506
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  13780553 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 13780506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 4446918 - 4446980
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||| || |||| |||||||||||| |||||  ||| |||||||||||| |||||||||||    
T  4446918 aaaatagatagtggatcctaccactaattgggtttcactatcattaattattttttacttttt 4446980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 4603159 - 4603205
Alignment:
Q  31 tgggtcccaccatcattaattatattttacttttttcaagattttat 77  Q
    |||||||||||||||||||||||||||||  ||||| || |||||||    
T  4603159 tgggtcccaccatcattaattatattttatcttttttaaaattttat 4603205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 40254180 - 40254217
Alignment:
Q  11 tggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  40254180 tggtgggtcctatcactaagtggatcccaccatcatta 40254217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 19908809 - 19908777
Alignment:
Q  27 taagtgggtcccaccatcattaattatatttta 59  Q
    ||||||||||||||||||||||||||| |||||    
T  19908809 taagtgggtcccaccatcattaattatttttta 19908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 30217517 - 30217477
Alignment:
Q  29 agtgggtcccaccatcattaattatattttacttttttcaa 69  Q
    |||| ||||||| |||||||||||| |||||||||||||||    
T  30217517 agtgagtcccactatcattaattattttttacttttttcaa 30217477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 16417 - 16555
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |    
T  16417 aaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaattatattttatttttttcaagattttatgtaattttatctctccaaattga 16516  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| ||||||||| ||||||||||||||||    
T  16517 agaaatggagaaacacataaattgagaggatcctaaccc 16555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 21151204 - 21151069
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  21151204 aaatagatggaggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaga 21151105  T
Q  104 aatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||| |||| ||||||||||||||| ||||||||||    
T  21151104 aatggagaaacacataaatggagagaatcctaaccc 21151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 25084748 - 25084886
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||||||| ||||||||    
T  25084748 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaaaattttatgtgtctttatctcttcaaattaa 25084847  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    | ||||| |||| ||||||||||||||||||| ||||||    
T  25084848 aaaaatggagaaacacataaatggagaggatcataaccc 25084886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 12139382 - 12139245
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtggg-tcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||     
T  12139382 aaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaattatattttactttttttaagattttatgtg--tttatctctccaaattg 12139285  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  12139284 aagaaatggagaaacacataaatggagaggatcctaaccc 12139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 16366570 - 16366438
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  16366570 aaatagatggtggatcctaccactaagtgtgtcccaccatcattaattatattttacttttttcaagattttacgtgtttttatctctccaaattgaaga 16366471  T
Q  104 aatgaagaagcacataaatggagaggatcctaa 136  Q
    |||| |||| |||||||||||||| ||||||||    
T  16366470 aatggagaaacacataaatggagatgatcctaa 16366438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 47226096 - 47226229
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaag 102  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||    
T  47226096 aaaaaatatggtgggtcccaccactaaatgggtcccaccatcattaattatattttactttttccaagattttatgtg-ttttatctctccaaattgaag 47226194  T
Q  103 aaatgaagaagcacataaatggagaggatcctaac 137  Q
    ||||  |||| ||||||||||||||||||||||||    
T  47226195 aaatagagaaacacataaatggagaggatcctaac 47226229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 18198311 - 18198180
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||| |    
T  18198311 aaaaaatagatggtgggttctgccactaagtgagtcccaccatcattaattatattttatttttttcaagattttatgtgattttatctctacaaattga 18198212  T
Q  101 agaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||| |||| |||||||||||||||||||    
T  18198211 agaaatggagaaacacataaatggagaggatc 18198180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7362623 - 7362497
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  7362623 aaaaaatagatggtgggtcgtaccactaaatgggttccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 7362524  T
Q  101 agaaatgaagaagcacataaatggaga 127  Q
    ||||||| |||| ||||||||||||||    
T  7362523 agaaatggagaaacacataaatggaga 7362497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9559074 - 9559201
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||  |    
T  9559074 aaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctccaaatgga 9559173  T
Q  101 agaaatgaagaagcacataaatggagag 128  Q
    ||||||  |||| || ||||||||||||    
T  9559174 agaaatcgagaaacatataaatggagag 9559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 45260447 - 45260586
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || |||| |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |    
T  45260447 aaaaaatagattgtggatcctaccactaagtggatcccatcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaattga 45260546  T
Q  101 agaaatgaagaagcacataaatggagagg-atcctaaccc 139  Q
    ||||||| |||| ||||||||| |||||| ||||||||||    
T  45260547 agaaatggagaaacacataaatagagaggaatcctaaccc 45260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4888522 - 4888391
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||  |||||||||||||||  |    
T  4888522 aaaaaatagatagtgggtcctaccactaagtaggtcccaccatcattaattatattttatgttttttaagattttatgtgtctttatctctccaaatgga 4888423  T
Q  101 agaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||  |||| |||||||||| ||||||||    
T  4888422 agaaattgagaaacacataaatgaagaggatc 4888391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 44648019 - 44647882
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtc--ccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaatt 98  Q
    |||||||| ||||||| ||| |||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||  |||||||   ||||||    
T  44648019 aaaaaatagatggtggatccgaccactaagtgggtctccctccatcattaattatattttacatttttcaagattttatgtgtctttatct---caaatt 44647923  T
Q  99 aaagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
     |||||||| |||| ||||||||||||||||||| ||||||    
T  44647922 gaagaaatggagaaacacataaatggagaggatcataaccc 44647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 33450557 - 33450431
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaa 104  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||| |||| || |||||||||||||   ||||    
T  33450557 aatagatggtgggtccaaccactaagtgggtcccatcatcattaattattttttatttttttcaaaattttgtgtgtttatatctctccaaatggtagaa 33450458  T
Q  105 atgaagaagcacataaatggagaggat 131  Q
    ||| ||||| ||||||||| |||||||    
T  33450457 atggagaaggacataaatgaagaggat 33450431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 47500307 - 47500433
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaa 104  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||| ||||  | |||||||| ||||   ||||    
T  47500307 aatagatggtgggtccaaccactaagtgggtcccatcatcattaattattttttatttttttcaaaattttgtgtgtctatatctctctaaatggtagaa 47500406  T
Q  105 atgaagaagcacataaatggagaggat 131  Q
    ||| ||||| |||||||||||||||||    
T  47500407 atggagaaggacataaatggagaggat 47500433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 29631091 - 29630967
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaa 112  Q
    |||||||| ||||||| || |||||||| ||||||||||||  |||||||||||||| ||||||||||  ||||| ||||||||| ||||||||| ||||    
T  29631091 gtgggtccaaccactatgtaggtcccactatcattaattattctttacttttttcaaaattttatgtgtctttatatctccaaatgaaagaaatggagaa 29630992  T
Q  113 gcacataaatggagaggatcctaac 137  Q
      |||| ||||||||||||| ||||    
T  29630991 agacatgaatggagaggatcttaac 29630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 39855842 - 39855908
Alignment:
Q  10 atggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagatttta 76  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  39855842 atggtcggtcctaccactaagtgggtcccatcatcattaattaaattttacttttttcaagatttta 39855908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 32916011 - 32915883
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || ||||||||||||| |||||| ||||||||||||| ||||||||||   |||||| ||  |||| ||||  |||||||||||||||  |    
T  32916011 aaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattatattt---ttttttaaaacttttttgtgtctttatctctccaaatgga 32915915  T
Q  101 agaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||| ||||| |||||||||| |||||||    
T  32915914 agaaatggagaagaacataaatggggaggatc 32915883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 40019712 - 40019640
Alignment:
Q  25 actaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    ||||| || |||||||||||||||||||  || |||||||||||||||||| |||| ||||||||||||||||    
T  40019712 actaaatgagtcccaccatcattaattactttatacttttttcaagattttttgtgtttttatctctccaaat 40019640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47799920 - 47799984
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  || ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  47799920 aaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 47799984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 30588576 - 30588526
Alignment:
Q  15 gggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  30588576 gggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 30588526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 46802351 - 46802445
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaat 97  Q
    |||||||| | ||||||||||||||||||||||||||||||| | |||||||| || | |||| |||||  |||  |||| ||||||||||||||||    
T  46802351 aaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattattttatgctttcttcaaacttt--tgtgtttttatctctccaaat 46802445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 19889066 - 19889118
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  19889066 gtgggtcctatcactaagtgggttccaccatcattaattattttttacttttt 19889118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 34985970 - 34986095
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttta-cttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    |||| ||||||||||  |||||||| || |||||| ||||||||||||| |||||  ||||||||| |||||||||   | |||||||||||||   |||    
T  34985970 aatagatggtgggtcaaaccactaaatgagtcccatcatcattaattattttttattttttttcaaaattttatgt--ctatatctctccaaatggtaga 34986067  T
Q  104 aatgaagaagcacataaatggagaggat 131  Q
    |||| ||||  |||||||||||||||||    
T  34986068 aatggagaaagacataaatggagaggat 34986095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 989184 - 989132
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattat 53  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  989184 aaaaaatatatagtgggtcctaccactaagtaggtccaaccataattaattat 989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19027704 - 19027751
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  19027704 aaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20726932 - 20726885
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  20726932 aaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 8149652 - 8149599
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttactttttt 66  Q
    ||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  8149652 gtgggtcatatcattaagtgggtcccaccatcattaattattttttaccttttt 8149599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 30153225 - 30153337
Alignment:
Q  24 cactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatg 123  Q
    ||||||||| || | ||||||||||||||| || || |||||||||  |||| | ||  |||||||||||||||  ||| |||||||| |  ||||||||    
T  30153225 cactaagtgagtactaccatcattaattattttatatttttttcaattttttttttgtctttatctctccaaatggaag-aatgaagatgatcataaatg 30153323  T
Q  124 gagaggatcctaac 137  Q
    ||||||||| ||||    
T  30153324 gagaggatcttaac 30153337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 32916212 - 32916160
Alignment:
Q  13 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||| ||||||||||||| | ||||||||||||||||| ||||| |||||    
T  32916212 gtgggtcataccactaagtggattccaccatcattaattattttttatttttt 32916160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4269234 - 4269187
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  4269234 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 4269187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 8734560 - 8734502
Alignment:
Q  16 ggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagatttt 75  Q
    ||||||| |||||| ||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  8734560 ggtcctatcactaaatgggtcc-accatcattaattattttttatttttttcaaaatttt 8734502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 11828945 - 11828992
Alignment:
Q  17 gtcctaccactaagtgggtcccaccatcattaattatattttactttt 64  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||| ||||    
T  11828945 gtcctaccattaagtgggttccaccatcattaattattttttattttt 11828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14696778 - 14696825
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  14696778 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 14696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30102548 - 30102501
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  30102548 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 30102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 40023296 - 40023385
Alignment:
Q  21 taccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaaga 111  Q
    ||||| |||||||||||||||| |||||||||| |||| |||||||||   |||| || | || |||||||| ||||  ||||||||||||    
T  40023296 taccattaagtgggtcccaccaccattaattat-tttttcttttttcatttttttttgagtttatatctctctaaatggaagaaatgaaga 40023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 47080470 - 47080433
Alignment:
Q  14 tgggtcctaccactaagtgggtcccaccatcattaatt 51  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  47080470 tgggtcctatcactaagcgggtcccaccatcattaatt 47080433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 8e-49; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 43719967 - 43720105
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||||||||||||||| |    
T  43719967 aaaaaataaattgtgggtcctaccactaagtgggtcccaccatcattaattatattttattttttttaagattttatgtgtctttatctctccaaattga 43720066  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||| |||| |||||||||||||| |||||||||||    
T  43720067 agaaatggagaaacacataaatggagaagatcctaaccc 43720105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 34373886 - 34373750
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  34373886 aaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattga 34373787  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaac 137  Q
    | |||||||||| |||||  |||||||||||||||||    
T  34373786 aaaaatgaagaaacacattgatggagaggatcctaac 34373750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 2230038 - 2229900
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  2230038 aaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattaa 2229939  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    ||||||  |||| |||||||||| |||||||||||||||    
T  2229938 agaaatagagaaacacataaatgaagaggatcctaaccc 2229900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 34373606 - 34373731
Alignment:
Q  2 aaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaa 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||| ||    
T  34373606 aaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttttgtctctttatctctccaaattgaa 34373705  T
Q  102 gaaatgaagaagcacataaatggaga 127  Q
    |||||| |||| ||||||||||||||    
T  34373706 gaaatggagaaacacataaatggaga 34373731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 40851829 - 40851690
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaatt-atattttacttttttcaagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| ||||||||| | |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||     
T  40851829 aaaaaatagatggtgggttcaaccactaagtgggtcctaccatcattaaatcatattttacttttttcaagattttatgtgtctttatctctccaaattg 40851730  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||||| ||||  |||||||||||||||||||||||||    
T  40851729 aagaaatggagaaatacataaatggagaggatcctaaccc 40851690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 19830451 - 19830591
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttta-cttttttcaagattttatgtgcttttatctctccaaatta 99  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||||||     
T  19830451 aaaaaatagatggtgggtcctaccattaagtgggtcccaccatcattaattatattttaccttttttaaagattttatgtgtctttatctctccaaattg 19830550  T
Q  100 aagaaatgaagaagcacat-aaatggagaggatcctaaccc 139  Q
    |||||||| | || ||||| |||||||||||||| ||||||    
T  19830551 aagaaatggaaaaacacataaaatggagaggatcttaaccc 19830591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 27033703 - 27033595
Alignment:
Q  4 aaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||    
T  27033703 aaatagatggtgggtcctaccactaagtggatcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaaga 27033604  T
Q  104 aatgaagaa 112  Q
    |||| ||||    
T  27033603 aatggagaa 27033595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 46167448 - 46167322
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| ||| ||  |||||||||| ||||| |    
T  46167448 aaaaaatatatggtgggtcctaccactaagtggatcctaccattattaattatattttacttttttcaagattatatttgtctttatctctctaaattga 46167349  T
Q  101 agaaatgaagaagcacataaatggaga 127  Q
    ||||||| | || ||||||||||||||    
T  46167348 agaaatggaaaaacacataaatggaga 46167322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 12403021 - 12402883
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttc-aagattttatgtgcttttatctctccaaatta 99  Q
    ||||| || ||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||  |||||||||||||||||    
T  12403021 aaaaattagatggtggattctaccactaagtgagtcccaccattattaattatattttacttttttttaagattttatgtgtctttatctctccaaatta 12402922  T
Q  100 aagaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |  |||||||||| |||||||||||||| |||||||||||    
T  12402921 agaaaatgaagaaacacataaatggaga-gatcctaaccc 12402883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 550836 - 550972
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| ||||||| ||||| || ||||||||||||||||| |||| ||||||||||||||||| || |||||||||   |||||||||||||||  |    
T  550836 aaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttatattttacttttttaaaaattttatgtatctttatctctccaaatgga 550935  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaac 137  Q
    ||||||| ||||  |||||||||||||||||| ||||    
T  550936 agaaatggagaaagacataaatggagaggatcttaac 550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 48084870 - 48084744
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaa 104  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||| ||||  | |||||||||||||   ||||    
T  48084870 aatagatggtgggtccaaccactaagtgggtcccatcatcattaattattttttatttttttcaaaattttgtgtgtctatatctctccaaatggtagaa 48084771  T
Q  105 atgaagaagcacataaatggagaggat 131  Q
    ||| ||||| |||||||||||||||||    
T  48084770 atggagaaggacataaatggagaggat 48084744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 566794 - 566898
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    ||||||||||||| || ||||| || ||||||||||||||| | |||| ||||||||||| ||||||||||||||||||  ||||||||||||||||  |    
T  566794 aaaaaatatatggcggatcctatcattaagtgggtcccacctttattatttatattttac-tttttcaagattttatgtatttttatctctccaaatgga 566892  T
Q  101 agaaat 106  Q
    ||||||    
T  566893 agaaat 566898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42613135 - 42613071
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  42613135 aaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 42613071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31523688 - 31523752
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  31523688 aaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttacttttt 31523752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 40810380 - 40810505
Alignment:
Q  5 aatatatggtgggtcctaccactaagtgggtcccaccatcattaattatatttta-cttttttcaagattttatgtgcttttatctctccaaattaaaga 103  Q
    |||| ||||||||||  |||||||||||||||||| ||||||||||||| |||||  ||||||||| ||||  |||| || ||||||||| ||| | |||    
T  40810380 aatagatggtgggtctaaccactaagtgggtcccatcatcattaattattttttattttttttcaaaattt--tgtgtttatatctctcctaatgataga 40810477  T
Q  104 aatgaagaagcacataaatggagaggat 131  Q
    |||| | ||  |||||||||||||||||    
T  40810478 aatggaaaaagacataaatggagaggat 40810505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 49679290 - 49679354
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  ||| |||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  49679290 aaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttacttttt 49679354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 52859433 - 52859528
Alignment:
Q  34 gtcccaccatcattaattatattttact-tttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagag 128  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||  ||||| |||||||||   ||||||| ||||  ||||||||| ||||    
T  52859433 gtcccacaatcattaattatattttactcttttttaagattttatgtgtatttatttctccaaatggtagaaatggagaaagacataaatgaagag 52859528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 1995483 - 1995435
Alignment:
Q  17 gtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||| |||||| ||| |||||||||||||||| |||||||||||    
T  1995483 gtcctaccaataagtgagtctcaccatcattaattattttttacttttt 1995435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 27959133 - 27959098
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttt 65  Q
    |||||||||||||||||||||||| |||||||||||    
T  27959133 gtgggtcccaccatcattaattattttttacttttt 27959098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 2310330 - 2310235
Alignment:
Q  35 tcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatc 132  Q
    ||||| ||||||||||||| ||||||||| || || ||||  ||||  |||||||||| ||||  ||||||| || |||||| |||||||||| ||||    
T  2310330 tcccatcatcattaattattttttactttctttaaaattt--tgtgtctttatctctctaaatggaagaaataaataagcacgtaaatggagatgatc 2310235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 3009264 - 3009230
Alignment:
Q  31 tgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||||||||||||||||| |||||||||||    
T  3009264 tgggtcccaccatcattaattattttttacttttt 3009230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 32577526 - 32577451
Alignment:
Q  61 ttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcctaac 137  Q
    ||||||||||||||| ||||  |||||||||||||||  |||||||| |||||    |||||||| |||||||||||    
T  32577526 ttttttcaagatttt-tgtgtctttatctctccaaatagaagaaatggagaagagtttaaatggaaaggatcctaac 32577451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7202 - 7064
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||| |||||| |    
T  7202 aaaaaatagatggtgggtcctactattaagtgggttccaccatcattaattatattttatttttttcaagattttatatgtctttatctctgcaaattga 7103  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  7102 agaaatgaagaaacacataaatggagaggatcctaaccc 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 6489 - 6585
Alignment:
Q  143 ataatgaggccaaagtatagaaatggagaaggaaaccaaatgcatacccttgtctcactatctatccccgaagcaagaaatacaacacacctaaaaacaa 242  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    |||||||| ||||||||||| ||||||||| ||||||||    
T  6489 ataatgaggccaaagtatacaaatggagaaggaaaccaaatgcatacccttgcctca----ctatccccaaagcaagaaattcaacacacccaaaaacaa 6584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 6611 - 6670
Alignment:
Q  249 caagcactcccaggtagcgcataacataaactaccaagtacctaccccatccatacaaca 308  Q
    |||||||||||||||||| ||| |||||| ||||||| |||||| |||| | ||||||||    
T  6611 caagcactcccaggtagcacattacataagctaccaactacctatcccaacaatacaaca 6670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 73889 - 73998
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagagg 129  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| |||| |||||||||||||||     
T  73889 gtgggtcccatcatcattaattatattttatttttttcaagattttatgtgtttttatctctctaaattgaagaaatggagaaacacataaatggagagc 73988  T
Q  130 atcctaaccc 139  Q
    ||||| ||||    
T  73989 atcctgaccc 73998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 6455 - 6585
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| |||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||       
T  6455 aaaaaatagatggtgggtcctacaactaaatgggtacaaccatcattaattatattttactttttccaagattttatgtgtctttatctctcaaaat--- 6551  T
Q  101 agaaatgaagaagcacataaatggagaggatcctaaccc 139  Q
         ||||||| ||||||||||||||||||||||||||    
T  6552 -----tgaagaaacacataaatggagaggatcctaaccc 6585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 13722 - 13645
Alignment:
Q  30 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||    
T  13722 gtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatg 13645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 22462 - 22593
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaa 100  Q
    |||||||| || |||| ||||||||||||||| || |||| || ||||||||||||||||||||||||||||||||||||  |||||||||| ||||  |    
T  22462 aaaaaatagatagtggatcctaccactaagtgagttccacaataattaattatattttacttttttcaagattttatgtgtatttatctctctaaatgta 22561  T
Q  101 agaaatgaagaagcacataaatggagaggatc 132  Q
    ||||||| |||   ||||||||||||| ||||    
T  22562 agaaatggagatagacataaatggagaagatc 22593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 9223 - 9349
Alignment:
Q  3 aaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaag 102  Q
    |||||| ||||||||||| |||||||||||| | |||||||||||||||||||| |   ||||| ||||||| |||||| |||||||||||||||  |||    
T  9223 aaaatagatggtgggtccaaccactaagtggattccaccatcattaattatattat---ttttttaagatttcatgtgcctttatctctccaaatggaag 9319  T
Q  103 aaatgaagaagcacataaatggagaggatc 132  Q
    ||||  |||| |||||||||||||||||||    
T  9320 aaattgagaaacacataaatggagaggatc 9349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17326 - 17390
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttt 65  Q
    ||||||||  || ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  17326 aaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattattttttacttttt 17390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 5632 - 5531
Alignment:
Q  34 gtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatgaagaagcacataaatggagaggatcc 133  Q
    |||||| ||||||||||||| || ||||||||||||  || | | ||  |||||||||||||||  |||||||||||| |  ||||||||||||||||||    
T  5632 gtcccatcatcattaattattttatacttttttcaaacttctttatgtctttatctctccaaatggaagaaatgaagaggatcataaatggagaggatcc 5533  T
Q  134 ta 135  Q
    ||    
T  5532 ta 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4721 - 4768
Alignment:
Q  1 aaaaaatatatggtgggtcctaccactaagtgggtcccaccatcatta 48  Q
    ||||||||  |||||||||||| |||||||||| ||||||||||||||    
T  4721 aaaaaataagtggtgggtcctatcactaagtggatcccaccatcatta 4768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 10531 - 10600
Alignment:
Q  38 caccatcattaattatattttacttttttcaagattttatgtgcttttatctctccaaattaaagaaatg 107  Q
    ||||||||||||| |  || ||||||||| |||||||| |||  |||||||||| ||||| |||||||||    
T  10531 caccatcattaataactttatactttttttaagattttttgtatttttatctctacaaatgaaagaaatg 10600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University