View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8385_low_11 (Length: 395)

Name: NF8385_low_11
Description: NF8385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8385_low_11
NF8385_low_11
[»] chr7 (41 HSPs)
chr7 (8-379)||(28520907-28521278)
chr7 (25-154)||(12234801-12234930)
chr7 (91-154)||(33645939-33646002)
chr7 (80-151)||(48157087-48157158)
chr7 (96-136)||(29290380-29290420)
chr7 (97-153)||(39551532-39551588)
chr7 (80-159)||(4966180-4966259)
chr7 (89-136)||(45078325-45078372)
chr7 (65-139)||(12834914-12834988)
chr7 (101-139)||(39539769-39539807)
chr7 (34-136)||(44615025-44615127)
chr7 (91-144)||(36537947-36538000)
chr7 (94-134)||(941589-941629)
chr7 (91-139)||(19719050-19719098)
chr7 (91-139)||(36598334-36598382)
chr7 (96-136)||(44686977-44687017)
chr7 (91-163)||(46082056-46082128)
chr7 (92-139)||(11048071-11048118)
chr7 (67-154)||(20553132-20553219)
chr7 (32-139)||(23214899-23215006)
chr7 (91-138)||(23434137-23434184)
chr7 (97-168)||(39334208-39334279)
chr7 (97-168)||(39360038-39360109)
chr7 (94-136)||(1645681-1645723)
chr7 (91-149)||(3500945-3501003)
chr7 (96-134)||(5006494-5006532)
chr7 (92-134)||(15740390-15740432)
chr7 (80-154)||(22387863-22387937)
chr7 (96-154)||(27626106-27626164)
chr7 (80-126)||(29574592-29574638)
chr7 (97-163)||(39568308-39568374)
chr7 (91-129)||(47427281-47427319)
chr7 (49-154)||(752998-753103)
chr7 (98-139)||(9872916-9872957)
chr7 (80-137)||(30535609-30535666)
chr7 (99-168)||(39345486-39345555)
chr7 (90-150)||(27496385-27496444)
chr7 (90-150)||(27503043-27503102)
chr7 (90-150)||(27517834-27517893)
chr7 (96-132)||(30134100-30134136)
chr7 (96-152)||(44808189-44808245)
[»] chr1 (37 HSPs)
chr1 (78-153)||(4549260-4549335)
chr1 (99-138)||(15581299-15581338)
chr1 (96-138)||(17628644-17628686)
chr1 (31-153)||(33723300-33723422)
chr1 (67-167)||(44031953-44032053)
chr1 (32-139)||(601085-601191)
chr1 (79-150)||(15579515-15579586)
chr1 (67-154)||(31517694-31517781)
chr1 (101-140)||(35350683-35350722)
chr1 (91-153)||(28689430-28689492)
chr1 (34-154)||(4549462-4549583)
chr1 (45-134)||(15709898-15709987)
chr1 (101-154)||(26184777-26184830)
chr1 (87-167)||(11639390-11639470)
chr1 (97-153)||(19412581-19412637)
chr1 (27-163)||(37593598-37593734)
chr1 (95-154)||(4699597-4699656)
chr1 (80-151)||(28389060-28389131)
chr1 (80-139)||(38170657-38170716)
chr1 (90-153)||(43029379-43029442)
chr1 (49-136)||(44928127-44928214)
chr1 (96-139)||(45327624-45327667)
chr1 (91-129)||(17631080-17631118)
chr1 (96-150)||(30418165-30418218)
chr1 (90-151)||(36514652-36514714)
chr1 (102-139)||(3223711-3223748)
chr1 (101-154)||(27140507-27140560)
chr1 (67-136)||(32515395-32515464)
chr1 (93-150)||(35925723-35925780)
chr1 (80-129)||(37175891-37175940)
chr1 (103-139)||(3070080-3070116)
chr1 (91-139)||(4481974-4482022)
chr1 (99-139)||(6231802-6231842)
chr1 (80-124)||(24279808-24279852)
chr1 (91-139)||(29635391-29635439)
chr1 (92-136)||(29723536-29723580)
chr1 (87-154)||(43338145-43338212)
[»] chr3 (38 HSPs)
chr3 (31-137)||(45541617-45541723)
chr3 (80-151)||(37273166-37273237)
chr3 (96-154)||(31010431-31010489)
chr3 (98-139)||(30923883-30923924)
chr3 (94-139)||(41724256-41724301)
chr3 (97-154)||(43115085-43115142)
chr3 (91-154)||(20192584-20192647)
chr3 (80-139)||(49772635-49772694)
chr3 (80-154)||(21574519-21574593)
chr3 (96-154)||(52412887-52412945)
chr3 (91-136)||(41452570-41452615)
chr3 (96-153)||(50004682-50004739)
chr3 (30-138)||(11253546-11253654)
chr3 (91-167)||(14548699-14548775)
chr3 (92-139)||(26808174-26808221)
chr3 (103-154)||(36200125-36200176)
chr3 (22-60)||(2100088-2100126)
chr3 (97-139)||(9279310-9279352)
chr3 (103-137)||(30750046-30750080)
chr3 (90-136)||(36646359-36646405)
chr3 (87-153)||(42745068-42745134)
chr3 (96-150)||(48048965-48049019)
chr3 (96-153)||(11039322-11039379)
chr3 (67-136)||(24603706-24603775)
chr3 (78-139)||(24624254-24624315)
chr3 (80-117)||(35197367-35197404)
chr3 (96-137)||(42537086-42537127)
chr3 (91-151)||(2606288-2606348)
chr3 (96-136)||(3015826-3015866)
chr3 (102-154)||(3044248-3044300)
chr3 (104-136)||(13804824-13804856)
chr3 (91-139)||(21865620-21865668)
chr3 (98-154)||(23785284-23785340)
chr3 (96-148)||(27290884-27290936)
chr3 (91-139)||(30573892-30573940)
chr3 (91-127)||(31403074-31403110)
chr3 (91-139)||(42817200-42817248)
chr3 (91-139)||(47132038-47132086)
[»] chr6 (46 HSPs)
chr6 (25-154)||(281760-281889)
chr6 (80-150)||(2767716-2767785)
chr6 (90-139)||(1669775-1669824)
chr6 (91-154)||(2460129-2460192)
chr6 (101-154)||(9667973-9668026)
chr6 (105-149)||(3155209-3155253)
chr6 (102-154)||(7785733-7785785)
chr6 (87-135)||(20377894-20377942)
chr6 (91-154)||(24670449-24670512)
chr6 (96-154)||(4420672-4420730)
chr6 (96-154)||(9027607-9027665)
chr6 (80-134)||(32917246-32917300)
chr6 (25-151)||(33498651-33498777)
chr6 (80-154)||(34403884-34403958)
chr6 (67-136)||(27595521-27595590)
chr6 (89-150)||(30523692-30523753)
chr6 (98-154)||(27909623-27909679)
chr6 (91-159)||(32577964-32578032)
chr6 (91-139)||(33832251-33832299)
chr6 (91-159)||(34939537-34939605)
chr6 (87-154)||(2455839-2455906)
chr6 (90-129)||(6310227-6310266)
chr6 (107-162)||(6536968-6537023)
chr6 (92-139)||(8364955-8365002)
chr6 (94-153)||(10836844-10836903)
chr6 (91-150)||(27615251-27615310)
chr6 (92-134)||(1575944-1575986)
chr6 (97-139)||(2034430-2034472)
chr6 (96-154)||(2117432-2117490)
chr6 (32-154)||(7148695-7148817)
chr6 (100-149)||(1019597-1019646)
chr6 (90-139)||(10616518-10616567)
chr6 (91-136)||(27693417-27693462)
chr6 (110-139)||(31668681-31668710)
chr6 (100-136)||(2460930-2460966)
chr6 (100-136)||(4246457-4246493)
chr6 (67-139)||(7901785-7901856)
chr6 (90-154)||(7945861-7945925)
chr6 (101-137)||(28776621-28776657)
chr6 (101-137)||(28798325-28798361)
chr6 (92-136)||(31624137-31624181)
chr6 (91-139)||(31686341-31686389)
chr6 (96-136)||(33284290-33284330)
chr6 (90-154)||(34404118-34404182)
chr6 (90-138)||(34404702-34404750)
chr6 (90-150)||(34939777-34939837)
[»] chr5 (40 HSPs)
chr5 (80-139)||(7674692-7674751)
chr5 (96-153)||(18700415-18700471)
chr5 (87-153)||(35963271-35963337)
chr5 (97-137)||(11700362-11700402)
chr5 (91-154)||(10125696-10125759)
chr5 (90-148)||(32172688-32172746)
chr5 (91-169)||(37690614-37690692)
chr5 (87-129)||(40499700-40499742)
chr5 (80-149)||(985647-985716)
chr5 (96-133)||(11457148-11457185)
chr5 (104-153)||(12467163-12467212)
chr5 (102-151)||(18704025-18704074)
chr5 (32-129)||(38047798-38047895)
chr5 (80-139)||(2468475-2468535)
chr5 (91-167)||(37526177-37526253)
chr5 (91-167)||(37588338-37588414)
chr5 (96-139)||(10272414-10272457)
chr5 (29-152)||(11297112-11297235)
chr5 (94-153)||(15074730-15074789)
chr5 (91-150)||(17368709-17368768)
chr5 (91-154)||(37611193-37611256)
chr5 (91-154)||(37787923-37787986)
chr5 (92-135)||(38766524-38766567)
chr5 (26-61)||(42646792-42646827)
chr5 (109-167)||(3504760-3504818)
chr5 (91-153)||(5951946-5952008)
chr5 (90-135)||(7853688-7853734)
chr5 (87-153)||(18853041-18853107)
chr5 (102-136)||(25705648-25705682)
chr5 (90-136)||(34117524-34117570)
chr5 (90-159)||(17258860-17258929)
chr5 (101-154)||(17369427-17369480)
chr5 (93-134)||(37489062-37489103)
chr5 (90-150)||(499708-499768)
chr5 (91-151)||(2092392-2092452)
chr5 (90-150)||(2092522-2092582)
chr5 (90-154)||(6109512-6109576)
chr5 (109-145)||(9104173-9104209)
chr5 (91-139)||(14295550-14295598)
chr5 (90-154)||(28586743-28586807)
[»] chr4 (30 HSPs)
chr4 (90-139)||(50800007-50800056)
chr4 (92-139)||(6978941-6978988)
chr4 (25-136)||(7367966-7368077)
chr4 (91-154)||(27123330-27123393)
chr4 (97-154)||(27970087-27970144)
chr4 (82-154)||(1137741-1137813)
chr4 (92-152)||(2874603-2874663)
chr4 (82-150)||(3176073-3176141)
chr4 (80-154)||(6987708-6987782)
chr4 (82-139)||(25571304-25571361)
chr4 (25-134)||(53315375-53315484)
chr4 (93-132)||(4243617-4243656)
chr4 (80-154)||(11264330-11264404)
chr4 (90-148)||(19304961-19305019)
chr4 (96-150)||(29467607-29467661)
chr4 (97-139)||(32071912-32071954)
chr4 (91-153)||(45128288-45128350)
chr4 (91-136)||(2996620-2996665)
chr4 (94-139)||(4691892-4691937)
chr4 (25-154)||(6428047-6428176)
chr4 (96-153)||(23676727-23676783)
chr4 (90-134)||(9841114-9841158)
chr4 (110-154)||(14011263-14011307)
chr4 (94-150)||(20936210-20936266)
chr4 (90-150)||(21592983-21593043)
chr4 (90-134)||(21952997-21953041)
chr4 (90-154)||(22662224-22662288)
chr4 (94-139)||(24370932-24370979)
chr4 (100-136)||(27124131-27124167)
chr4 (91-139)||(53155304-53155352)
[»] chr8 (42 HSPs)
chr8 (67-154)||(26410308-26410396)
chr8 (103-154)||(11183574-11183625)
chr8 (80-139)||(14949910-14949969)
chr8 (90-168)||(6950337-6950415)
chr8 (35-107)||(10939451-10939523)
chr8 (91-163)||(26479805-26479877)
chr8 (256-367)||(34293326-34293438)
chr8 (256-367)||(12726785-12726896)
chr8 (81-151)||(43504783-43504853)
chr8 (90-139)||(11813082-11813131)
chr8 (97-153)||(13000408-13000464)
chr8 (98-150)||(25869251-25869303)
chr8 (91-151)||(30259146-30259206)
chr8 (90-134)||(39551186-39551230)
chr8 (96-136)||(43709309-43709349)
chr8 (64-139)||(3090190-3090264)
chr8 (80-139)||(11569424-11569483)
chr8 (67-150)||(30191095-30191178)
chr8 (91-134)||(30987969-30988012)
chr8 (90-129)||(45071428-45071467)
chr8 (92-154)||(4560531-4560593)
chr8 (96-154)||(31875578-31875636)
chr8 (27-136)||(40356972-40357084)
chr8 (109-151)||(42597470-42597512)
chr8 (97-154)||(4055600-4055657)
chr8 (91-136)||(8255439-8255484)
chr8 (90-139)||(10062118-10062167)
chr8 (93-154)||(10383914-10383975)
chr8 (80-137)||(11188122-11188179)
chr8 (109-154)||(11795121-11795166)
chr8 (94-139)||(27119910-27119955)
chr8 (90-154)||(2458543-2458607)
chr8 (90-154)||(5088881-5088945)
chr8 (90-138)||(11118974-11119022)
chr8 (92-136)||(11770990-11771034)
chr8 (91-167)||(12361208-12361284)
chr8 (91-151)||(26370997-26371057)
chr8 (80-139)||(32840952-32841012)
chr8 (80-151)||(34849135-34849207)
chr8 (97-149)||(37740411-37740462)
chr8 (96-136)||(39049319-39049359)
chr8 (90-154)||(42215283-42215347)
[»] scaffold0020 (1 HSPs)
scaffold0020 (31-154)||(159891-160014)
[»] chr2 (40 HSPs)
chr2 (80-154)||(8820259-8820333)
chr2 (96-154)||(34652019-34652077)
chr2 (28-154)||(43529773-43529899)
chr2 (90-139)||(14316122-14316171)
chr2 (30-167)||(28677576-28677713)
chr2 (91-139)||(787376-787424)
chr2 (87-154)||(1647265-1647332)
chr2 (34-129)||(28803451-28803546)
chr2 (80-167)||(40158734-40158821)
chr2 (92-139)||(44606089-44606136)
chr2 (104-154)||(1939323-1939373)
chr2 (90-144)||(17380607-17380661)
chr2 (97-154)||(32821838-32821895)
chr2 (90-162)||(38388707-38388780)
chr2 (26-118)||(9996803-9996895)
chr2 (96-136)||(11344753-11344793)
chr2 (74-138)||(37186277-37186341)
chr2 (82-154)||(41817197-41817269)
chr2 (102-154)||(43985238-43985290)
chr2 (90-153)||(1830075-1830138)
chr2 (96-135)||(9878665-9878704)
chr2 (96-151)||(10285892-10285947)
chr2 (96-139)||(30538156-30538199)
chr2 (91-150)||(41032933-41032992)
chr2 (91-154)||(43065428-43065491)
chr2 (103-153)||(14451040-14451090)
chr2 (92-150)||(27237872-27237930)
chr2 (91-137)||(45314914-45314960)
chr2 (81-134)||(4550796-4550849)
chr2 (96-129)||(6561391-6561424)
chr2 (90-139)||(15120227-15120276)
chr2 (91-136)||(16398449-16398494)
chr2 (91-136)||(32106777-32106822)
chr2 (105-154)||(33942179-33942228)
chr2 (100-153)||(41809232-41809285)
chr2 (97-153)||(1160655-1160711)
chr2 (90-150)||(1742009-1742069)
chr2 (99-139)||(10285399-10285439)
chr2 (96-136)||(12215854-12215894)
chr2 (91-154)||(33231930-33231991)
[»] scaffold0147 (1 HSPs)
scaffold0147 (91-139)||(12682-12730)
[»] scaffold0153 (2 HSPs)
scaffold0153 (97-154)||(6478-6535)
scaffold0153 (97-154)||(13498-13555)
[»] scaffold0024 (1 HSPs)
scaffold0024 (74-139)||(27620-27685)
[»] scaffold0003 (1 HSPs)
scaffold0003 (96-139)||(306370-306413)
[»] scaffold0311 (1 HSPs)
scaffold0311 (96-150)||(10600-10654)
[»] scaffold0015 (1 HSPs)
scaffold0015 (94-136)||(68960-69002)
[»] scaffold0608 (1 HSPs)
scaffold0608 (91-139)||(9615-9663)


Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 8 - 379
Target Start/End: Original strand, 28520907 - 28521278
Alignment:
Q  8 tgagatgaatagttacctagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaaca 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28520907 tgagattaatagttacctagggtctgtttggattgaattacttgagcttttctacaagtataagcccttctaagactgcttaggagaacttatggaaaca 28521006  T
Q  108 acttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactttacgaatacaggcttatataaaaacagttaacttatacat 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28521007 acttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactttacgaaaacaggcttatataaaaacagttaacttatacat 28521106  T
Q  208 aagcacttgtatgatatacatgcatgcactaagcgcttaattaaactgaatttcttgttcaaccaaggtcaccatcagcagtgatatacaagagccatga 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521107 aagcacttgtatgatatacatgcatgcactaagcgcttaattaaactgaatttcttgttcaaccaaggtcaccatcagcagtgatatacaagagccatga 28521206  T
Q  308 agaaaaagtgctagctccatttactgctacattctcatctagaggaccaaatccaggatccaaacatcttct 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28521207 agaaaaagtgctagctccatttactgctacattctcatctagaggaccaaatccaggatccaaacatcttct 28521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 12234801 - 12234930
Alignment:
Q  25 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 124  Q
    ||||| || |||||||||| ||| |||||||||||||   | || ||| | | | ||||||||| | | | ||||| |||||||||||||||||||||||    
T  12234801 tagggcctatttggattgacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctat 12234900  T
Q  125 aagctgttttcagctattttccataagctc 154  Q
    |||||||||||||||  |||||||||||||    
T  12234901 aagctgttttcagcttatttccataagctc 12234930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 33645939 - 33646002
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||||||||||||||||||||||||||||| |||||| || |  |||||||||||||    
T  33645939 gagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctc 33646002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 48157087 - 48157158
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||||| || ||||| ||||| ||||||||||||| |||||| |||||||||||||||||  ||||||||||    
T  48157087 agactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataag 48157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 29290420 - 29290380
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  29290420 cttatggaaacaacttatgacatgtccataagctgttttca 29290380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 39551532 - 39551588
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||  ||||||||||||    
T  39551532 ttatggaaacaacttatgacatgtccataaggtgttgtcagcttatttccataagct 39551588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 4966259 - 4966180
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 159  Q
    |||||| |||||||| ||||| ||||| |||||||| ||||| ||||| ||||||||| |  ||||||||||||| ||||    
T  4966259 agactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcag 4966180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 136
Target Start/End: Complemental strand, 45078372 - 45078325
Alignment:
Q  89 aggagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  45078372 aggagaacttatagaaataacttatgacatgtccataagctgttttca 45078325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 12834914 - 12834988
Alignment:
Q  65 gtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||| ||||| |||||| || | |||  ||||||||||| ||||||||||||| |||| ||||||||||||    
T  12834914 gtataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaactgttttcagct 12834988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 39539769 - 39539807
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  39539769 ggaaacaacttatgacatgtccataagctgttttcagct 39539807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 44615025 - 44615127
Alignment:
Q  34 tttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttt 133  Q
    |||||||||  ||| |||||||||||||  || |||| | |||  || |||| | |||||| |||||| ||||||||||||||||||| | |||||||||    
T  44615025 tttggattgccttaattgagcttatctactagcataaccacttgcaaaactgttcaggagagcttatgaaaacaacttatgacatgtccacaagctgttt 44615124  T
Q  134 tca 136  Q
    |||    
T  44615125 tca 44615127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 36538000 - 36537947
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctatttt 144  Q
    ||||||||||||||||||||||||||||||  ||||| |||||| |||| ||||    
T  36538000 gagaacttatggaaacaacttatgacatgttcataagttgtttttagctttttt 36537947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 941629 - 941589
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  941629 aacttatggaaacaacttatgacatgtccataagcagtttt 941589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 19719098 - 19719050
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| ||||||||||||||||||  |||| ||||||||||||    
T  19719098 gagaacttatgaaaacaacttatgacatgttcataaactgttttcagct 19719050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 36598334 - 36598382
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||||    
T  36598334 gagagcttatggaaacatcttatgacatgttcataagctgttttcagct 36598382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 44687017 - 44686977
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  44687017 cttatggaaacaacttatgacatgtccatgagctgttttca 44686977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 46082128 - 46082056
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaata 163  Q
    |||| |||||| ||||||||||||||||| | ||||| |||||||||||  ||| |||||||||  |||||||    
T  46082128 gagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaata 46082056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 11048118 - 11048071
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||  ||||||||||||||||||  |||||||||||||||||    
T  11048118 agaacttatcaaaacaacttatgacatgttcataagctgttttcagct 11048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 20553219 - 20553132
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| ||| | |||||| | |||||| |||||||||||| |||| |||||||  ||||| ||||||||| |  |||||||||||||    
T  20553219 ataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcataagttgttttcagattatttccataagctc 20553132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 23215006 - 23214899
Alignment:
Q  32 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgt 131  Q
    |||||||||||| ||| |||| ||||||||  || |||| | ||| | |||||| ||  ||||| ||||| |||||||||||||||| || ||||||| |    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttatgacatttccataagctct 23214907  T
Q  132 tttcagct 139  Q
     |||||||    
T  23214906 attcagct 23214899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 23434137 - 23434184
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagc 138  Q
    |||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  23434137 gagagcttttggacacaacttatgacatgtctttaagctgttttcagc 23434184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 39334279 - 39334208
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 168  Q
    |||||||||||| |||||||||||| ||||| ||  |||||||  |||||||||||||| ||| ||| ||||    
T  39334279 ttatggaaacaatttatgacatgtccataagttgcattcagcttatttccataagctcgccaggatagcttt 39334208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 39360109 - 39360038
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 168  Q
    |||||||||||||||||||||| || ||||| || ||||||||  |||| ||||||||| ||| ||| ||||    
T  39360109 ttatggaaacaacttatgacatatccataagttgctttcagcttatttcaataagctcgccaggatagcttt 39360038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 1645681 - 1645723
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||| |||||||||||||||||| |||||| ||||||||    
T  1645681 aacttatgtaaacaacttatgacatgtttataagttgttttca 1645723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 3500945 - 3501003
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccata 149  Q
    |||| |||||||||| ||||||||||||||  || ||||||||||||||  ||||||||    
T  3500945 gagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttccata 3501003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 5006494 - 5006532
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  5006494 cttatggaaacaacttataacatgtctataagttgtttt 5006532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 15740390 - 15740432
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    |||||||||| ||||||||||||||||||  ||||||||||||    
T  15740390 agaacttatgaaaacaacttatgacatgttcataagctgtttt 15740432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 22387863 - 22387937
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| || ||||| |||||| |||||||||||| ||||| ||||| ||||||| | ||  |||||||||||||    
T  22387863 agactgtttgggagagcttatgaaaacaacttatggcatgtttataaactgtttttaacttatttccataagctc 22387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 27626106 - 27626164
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||| ||||||||||||| |||| ||||||| | ||  |||||||||||||    
T  27626106 cttatggaaacagcttatgacatgtccataaactgttttaaacttatttccataagctc 27626164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 29574592 - 29574638
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataa 126  Q
    |||||| || |||||||||||||||||| ||||||||||||| ||||    
T  29574592 agactgtttcggagaacttatggaaacagcttatgacatgtccataa 29574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 39568308 - 39568374
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaata 163  Q
    ||||||||| ||||||||||||||| ||||| ||||||| |||  ||||  |||||| |||||||||    
T  39568308 ttatggaaataacttatgacatgtccataagttgttttcggcttatttctgtaagcttgtcagaata 39568374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 47427281 - 47427319
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagct 129  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  47427281 gagagcttatggaaacaacttatgacatctctataagct 47427319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 753103 - 752998
Alignment:
Q  49 ttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 148  Q
    |||||||||||||   | |||||| | |||||||||| ||   |||||||||| |||||  ||||||||| || |||||||||||| ||||| ||| |||    
T  753103 ttgagcttatctacttgcataagcacctctaagactgattgaaagaacttatgaaaacagtttatgacatatcaataagctgtttttagctaattttcat 753004  T
Q  149 aagctc 154  Q
    | ||||    
T  753003 atgctc 752998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 9872957 - 9872916
Alignment:
Q  98 tatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||||||||||||||||| ||||| ||||| |||||    
T  9872957 tatggaaacaacttatgacatgtccataagttgtttccagct 9872916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 30535666 - 30535609
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcag 137  Q
    |||||| || |||||||||||| ||||||||||||| ||||   ||||||||||||||    
T  30535666 agactgttttggagaacttatgaaaacaacttatgatatgttcgtaagctgttttcag 30535609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 39345555 - 39345486
Alignment:
Q  99 atggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 168  Q
    |||||||||  |||||||||||| ||||| || ||||||||  |||||||||| ||||||| ||| ||||    
T  39345555 atggaaacagtttatgacatgtccataagttgctttcagcttatttccataaggtcgtcaggatagcttt 39345486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 27496385 - 27496444
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| |||| ||||||| || |||||||||| |||||||||||||||||  |||||||||    
T  27496385 ggagagcttaaggaaaca-ctcatgacatgtccataagctgttttcagcttatttccataa 27496444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 27503043 - 27503102
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| |||| ||||||| || |||||||||| |||||||||||||||||  |||||||||    
T  27503043 ggagagcttaaggaaaca-ctcatgacatgtccataagctgttttcagcttatttccataa 27503102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 27517834 - 27517893
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| |||| ||||| ||||||||||||||| |||||| ||||||||||  |||||||||    
T  27517834 ggagagcttaaggaaa-aacttatgacatgtccataagcagttttcagcttatttccataa 27517893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 30134136 - 30134100
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgtt 132  Q
    |||||||||||| |||||||||||||||||| |||||    
T  30134136 cttatggaaacagcttatgacatgtctataatctgtt 30134100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 44808245 - 44808189
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagc 152  Q
    |||||| ||| ||||||||||||||| |||| ||||||||||||  ||| |||||||    
T  44808245 cttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataagc 44808189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 4549335 - 4549260
Alignment:
Q  78 taagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||  ||||||||||||    
T  4549335 taagactgcttaagagaacttttggaaacaatttatgacatgtctataagttgttttcagcttatttccataagct 4549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 15581338 - 15581299
Alignment:
Q  99 atggaaacaacttatgacatgtctataagctgttttcagc 138  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15581338 atggaaacaacttatgacatgtctataagctgttttcagc 15581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 17628686 - 17628644
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagc 138  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  17628686 cttatggaaacaacttatgacatgtccataagctgttttcagc 17628644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 33723300 - 33723422
Alignment:
Q  31 ctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctg 130  Q
    ||||||||||||| ||| |||| ||||||||  |  |||| | ||| | ||||||||| ||| |||||||||||||| || |||||||||  || || ||    
T  33723300 ctgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatgagatg 33723399  T
Q  131 ttttcagctattttccataagct 153  Q
    |||||||||  ||||||||||||    
T  33723400 ttttcagcttatttccataagct 33723422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 44031953 - 44032053
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataact 166  Q
    |||||| ||| | ||||||  ||||||| |||||| || || || |||||||||| ||||||| |||||||||| ||||||||||||| |||  ||||||    
T  44031953 ataagcacttgttagactgtctaggagagcttatgtaagcagctaatgacatgtccataagctattttcagctaatttccataagctcttcaagataact 44032052  T
Q  167 t 167  Q
    |    
T  44032053 t 44032053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 601191 - 601085
Alignment:
Q  32 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgt 131  Q
    |||||||||||| |||||||||||||||| | |  |||||| ||| | |||||| || ||||||  || | |||||||||||||||||| | |||||| |    
T  601191 tgtttggattgacttacttgagcttatctgataacataagcacttttgagactgtttgggagaatctaagaaaacaacttatgacatgt-tgtaagctat 601093  T
Q  132 tttcagct 139  Q
    ||||||||    
T  601092 tttcagct 601085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 15579586 - 15579515
Alignment:
Q  79 aagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||||| || ||||| ||| |||||||||||||||||||||| ||||| |||| ||||||  |||||||||    
T  15579586 aagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 31517694 - 31517781
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| ||| | |||||| || |||||||||||  |||||||| |||||||||  |||||||||||||||||  ||| |||||||||    
T  31517694 ataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctc 31517781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 140
Target Start/End: Complemental strand, 35350722 - 35350683
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcagcta 140  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  35350722 ggaaacaacttatgacatgtccataagctgttttcagcta 35350683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 28689430 - 28689492
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||| ||||||| ||||||||||||| ||||| |||||||||||  ||| ||||||||    
T  28689430 gagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagct 28689492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 4549462 - 4549583
Alignment:
Q  34 tttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat-aagctgtt 132  Q
    |||||||||  ||| ||||| |||||||   | ||||||  |||| |||||| || ||||| ||||| ||||||||||||||||||||||| ||| ||||    
T  4549462 tttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatgtctataaagttgtt 4549561  T
Q  133 ttcagctattttccataagctc 154  Q
    |||| | | |||| ||||||||    
T  4549562 ttcaacaaatttcaataagctc 4549583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 15709987 - 15709898
Alignment:
Q  45 ttacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    ||||||||| |||||||  || |||||| ||| | |||||| || |||||||||| ||||| | ||||||||||||  ||||||||||||    
T  15709987 ttacttgaggttatctactagcataagcacttttgagactgtttgggagaacttacggaaatagcttatgacatgtagataagctgtttt 15709898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 26184830 - 26184777
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||| ||||||||||||| ||||||||||||||| |  |||||||||||||    
T  26184830 ggaaacagcttatgacatgtccataagctgttttcagattatttccataagctc 26184777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 11639390 - 11639470
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 167  Q
    |||| ||| |||||| ||||| ||||||||||||| |||||||||||| ||||  ||| |||||||||   ||||||||||    
T  11639390 ttagaagagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataactt 11639470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 19412581 - 19412637
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||||||||||||||| |||||||| |||  |||  ||||||||||||    
T  19412581 ttatggaaacaacttatgacatgtccataagctgattttggcttatttccataagct 19412637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 37593598 - 37593734
Alignment:
Q  27 gggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataa 126  Q
    |||||||||||  |||| ||| |||||||||| ||   | |||| | ||| | |||||| || ||| |||| ||| | ||||||||||||||||  ||||    
T  37593598 gggtctgtttgatttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataa 37593697  T
Q  127 gctgttttcagctattttccataagctcgtcagaata 163  Q
    |||||||||||||  ||| ||||||||| ||| ||||    
T  37593698 gctgttttcagcttattttcataagctcttcaaaata 37593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 4699597 - 4699656
Alignment:
Q  95 acttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||| ||||||||||||||||||  |||||||||||| ||||  |||| ||||||||    
T  4699597 acttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctc 4699656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 28389060 - 28389131
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||||||||||||||||||  ||||||||||||||| |||| |||||  |||| ||| ||  ||||||||||    
T  28389060 agactgcttaggagaacttccggaaacaacttatgatatgtttataaaatgttgtcaacttatttccataag 28389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 38170657 - 38170716
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||| ||||| |||||| ||||| ||||||||||||  ||||| |||||||||||    
T  38170657 agactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgttttcagct 38170716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 43029379 - 43029442
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||| |||||| |||||  |||| ||||||||||||||| |||||||||  ||||||||||||    
T  43029379 ggagagcttatgaaaacagtttattacatgtctataagctattttcagcttatttccataagct 43029442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 44928127 - 44928214
Alignment:
Q  49 ttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||| ||  ||||||||| ||| ||||| || || | ||||||||| |||||||||||||||||| |  |||| ||||||||    
T  44928127 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagaaacaacttatgacatgcccgtaagttgttttca 44928214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 45327667 - 45327624
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||||||||||||||||||| ||||  |||||||||||    
T  45327667 cttatggaaacaacttatgacatgtccataaattgttttcagct 45327624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 17631080 - 17631118
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagct 129  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  17631080 gagagcttatggaaacaacttatgacatgtccataagct 17631118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 30418165 - 30418218
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||||||||||||||||||||||| ||||| |  |||||||| ||||||||||    
T  30418165 cttatggaaacaacttatgacatgtccataag-ttatttcagcttttttccataa 30418218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 36514652 - 36514714
Alignment:
Q  90 ggagaacttatggaaacaacttatgaca-tgtctataagctgttttcagctattttccataag 151  Q
    |||||||||||| ||| ||||||||||| ||| || ||||||||||||||| |||| ||||||    
T  36514652 ggagaacttatgaaaataacttatgacattgtttagaagctgttttcagctttttttcataag 36514714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 3223748 - 3223711
Alignment:
Q  102 gaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  3223748 gaaacaacttatgacatgtttataagttgttttcagct 3223711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 27140560 - 27140507
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||| ||||||||||||| ||||| |||||||||||  ||| |||||||||    
T  27140560 ggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctc 27140507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 32515395 - 32515464
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||| ||| | |||||| || ||||| |||||||||||| | ||||||||||| ||||| ||||||||    
T  32515395 ataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttca 32515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 35925780 - 35925723
Alignment:
Q  93 gaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||||||| ||||| ||||||||||||  |||||||||||||| ||  |||||||||    
T  35925780 gaacttatgaaaacagcttatgacatgttcataagctgttttcaacttatttccataa 35925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 37175891 - 37175940
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    |||||| |||| ||| ||||||||||||||||||||||| | ||||||||    
T  37175891 agactgtttagaagagcttatggaaacaacttatgacatatttataagct 37175940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 3070080 - 3070116
Alignment:
Q  103 aaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||||||||||  |||||||||||||||||    
T  3070080 aaacaacttatgacatgttcataagctgttttcagct 3070116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 4482022 - 4481974
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||| ||||    
T  4482022 gagaacttatgaaaacaacttattacatgttcataagctgtttttagct 4481974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 6231802 - 6231842
Alignment:
Q  99 atggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||||| |||||||||| |||| ||||||||||||    
T  6231802 atggaaacaactaatgacatgtccataaactgttttcagct 6231842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 24279852 - 24279808
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctat 124  Q
    |||||| || || |||| |||||||||||||||||||||||||||    
T  24279852 agactgattgggggaacctatggaaacaacttatgacatgtctat 24279808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 29635439 - 29635391
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| ||||| |||||| ||||||||||| |||||| |||||||||||    
T  29635439 gagaatttatgaaaacaagttatgacatgtttataagttgttttcagct 29635391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 29723580 - 29723536
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||| ||||||||| ||||||||||||| |||| |||||||||    
T  29723580 agaactaatggaaacagcttatgacatgtccataaactgttttca 29723536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 43338212 - 43338145
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcag-ctattttccataagctc 154  Q
    |||| |||||||||||||||| ||||||||||||  |||| || ||||||| ||||||| |||||||||    
T  43338212 ttagaagaacttatggaaacagcttatgacatgttcataatctattttcagcctatttt-cataagctc 43338145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 45541723 - 45541617
Alignment:
Q  31 ctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctg 130  Q
    ||||||||||||| ||| |||||||||| |||  |||||| | ||| |||||||| |||| |||||||||| ||||| ||||||||||||  ||||||||    
T  45541723 ctgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagctg 45541624  T
Q  131 ttttcag 137  Q
    |||||||    
T  45541623 ttttcag 45541617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 37273237 - 37273166
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||||| || ||||| |||||||||||||||||||||||||| ||||| |||||||| ||  ||||||||||    
T  37273237 agactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataag 37273166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 31010489 - 31010431
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| |||||||||||||||||||| |||||||||||||||||   ||||||||||||    
T  31010489 cttatagaaacaacttatgacatgtccataagctgttttcagcttaattccataagctc 31010431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 30923883 - 30923924
Alignment:
Q  98 tatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  30923883 tatggaaacagcttatgacatgtctataagctgttttcagct 30923924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 41724301 - 41724256
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||    
T  41724301 aacttatggaaacaacttatgacatgtccataagttgttttcagct 41724256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 43115142 - 43115085
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||||||||||||||||||| ||||  |||||||||||  |||||||||||||    
T  43115142 ttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctc 43115085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 20192584 - 20192647
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| ||||| |||||| ||||||||||||| |||||||||||||| ||  |||||||||||||    
T  20192584 gagagcttatagaaacagcttatgacatgtccataagctgttttcaactcatttccataagctc 20192647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 49772635 - 49772694
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||| |||||||| |||||||||||||||||||| ||||| ||||||| |||| ||||    
T  49772635 agactgtttaggagagcttatggaaacaacttatgagatgtccataagctttttttagct 49772694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 21574593 - 21574519
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| || ||||| |||||| ||||||||||||||||||  |||||||| ||| ||||  |||||||||||||    
T  21574593 agactgtttgggagagcttatgaaaacaacttatgacatgttcataagctgcttttagcttatttccataagctc 21574519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 52412887 - 52412945
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||  |||||||| ||||    
T  52412887 cttatagaaacaacctatgacatgtttataagctgttttcagcttatttccatatgctc 52412945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 41452615 - 41452570
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  41452615 gagaccttatagaaacaacttatgatatgtctataagctgttttca 41452570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 50004739 - 50004682
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||||||||||||||||||||||||   ||||||||||||||||  |||| |||||||    
T  50004739 cttatggaaacaacttatgacatgttcttaagctgttttcagcttatttcaataagct 50004682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 11253654 - 11253546
Alignment:
Q  30 tctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    |||||||| ||||| ||| ||||| |||||||  || |||||| |||   |||||| || | |||| ||||  |||||||||||||||| ||||||| ||    
T  11253654 tctgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttatgacatatctataaact 11253555  T
Q  130 gttttcagc 138  Q
    |||||||||    
T  11253554 gttttcagc 11253546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 14548699 - 14548775
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 167  Q
    |||| |||||| ||||||| |||||||| |  ||| |||||||||||||  |||||||||||||  |||||||||||    
T  14548699 gagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataactt 14548775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 26808174 - 26808221
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||| |||||||||||||||||||| ||||| ||||||| ||||    
T  26808174 agaacttacggaaacaacttatgacatgtttataaactgttttgagct 26808221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 36200176 - 36200125
Alignment:
Q  103 aaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||||||||||||| ||||| |||||||||||  ||||||| |||||    
T  36200176 aaacaacttatgacatgtccataagttgttttcagcttatttccatgagctc 36200125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 2100088 - 2100126
Alignment:
Q  22 acctagggtctgtttggattgaattacttgagcttatct 60  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  2100088 acctagggtctgtttggattgacttatttgagcttatct 2100126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 9279310 - 9279352
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||    
T  9279310 ttatggaaacagcttataacatgtatataagctgttttcagct 9279352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 30750080 - 30750046
Alignment:
Q  103 aaacaacttatgacatgtctataagctgttttcag 137  Q
    ||||||||||||||||||| |||||||||||||||    
T  30750080 aaacaacttatgacatgtccataagctgttttcag 30750046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 36646359 - 36646405
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    ||||| ||||||||||| ||||||| |||||| ||||||||||||||    
T  36646359 ggagagcttatggaaaccacttatggcatgtccataagctgttttca 36646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 42745134 - 42745068
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||| |||| ||||| ||||||||||||||||||  ||||| |||||||| ||  ||||||||||||    
T  42745134 ttagaagaatttatgtaaacaacttatgacatgttcataagttgttttcatcttatttccataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 48048965 - 48049019
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||| || ||||| |||||||||| |||||||||||||||||  |||||||||    
T  48048965 cttatgaaaccaactcatgacatgtccataagctgttttcagcttatttccataa 48049019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 11039322 - 11039379
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||  |||||||||||| ||||| |||||||||||  | ||||||||||    
T  11039322 cttatggaaacatattatgacatgtccataagttgttttcagcttatctccataagct 11039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 24603706 - 24603775
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||| | ||| |||||| || ||||||||||| ||||||  |||||||||| | ||||||||||||||    
T  24603706 ataagcacctctgagactgtttgggagaacttattgaaacagtttatgacatgcccataagctgttttca 24603775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 24624315 - 24624254
Alignment:
Q  78 taagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||| || | ||| |||||| ||||| ||||||||||||| |||| ||||||||||||    
T  24624315 taagactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttcagct 24624254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 35197404 - 35197367
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgaca 117  Q
    |||||| || ||||||||||||||||||||||||||||    
T  35197404 agactgattgggagaacttatggaaacaacttatgaca 35197367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 42537127 - 42537086
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcag 137  Q
    |||||||||||||||||| ||||||| | |||||||||||||    
T  42537127 cttatggaaacaacttattacatgtccacaagctgttttcag 42537086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 2606288 - 2606348
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||| ||||||||||||||||||||||||| | | || | ||||||||||  |||||||||    
T  2606288 gagatcttatggaaacaacttatgacatgtgtgtcagttcttttcagctaacttccataag 2606348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 3015826 - 3015866
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  3015826 cttatgaaaacaacttatgacatgtccataagatgttttca 3015866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 3044248 - 3044300
Alignment:
Q  102 gaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||||||||||  |||||||||||||| ||  ||| |||||||||    
T  3044248 gaaacaacttatgacatgttcataagctgttttcaacttattttcataagctc 3044300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 13804856 - 13804824
Alignment:
Q  104 aacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||||||||| ||||||||||||||    
T  13804856 aacaacttatgacatgtccataagctgttttca 13804824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 21865668 - 21865620
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||| ||||||||||||||||||||  || ||| |||||||||    
T  21865668 gagaacttatagaaacaacttatgacatgtccgtacgctattttcagct 21865620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 23785340 - 23785284
Alignment:
Q  98 tatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||| |||||| | |||| ||||| |||||||||||  |||||||||||||    
T  23785340 tatggaaacagcttatggcgtgtccataagttgttttcagcttgtttccataagctc 23785284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 27290884 - 27290936
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 148  Q
    |||||| ||||| ||||||||||| | |||||||||||||||||  |||||||    
T  27290884 cttatgaaaacagcttatgacatgcccataagctgttttcagcttatttccat 27290936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 30573892 - 30573940
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| |||||| ||||| |||||  |||||||||||||||||    
T  30573892 gagaacttatgaaaacaaattatggcatgttcataagctgttttcagct 30573940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 31403110 - 31403074
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataag 127  Q
    |||| |||||||||||||||||| |||||||||||||    
T  31403110 gagagcttatggaaacaacttattacatgtctataag 31403074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 42817200 - 42817248
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||| |||||||||||| | ||||||||||| ||||| |||||||||||    
T  42817200 gagagcttatggaaacagcatatgacatgtccataagttgttttcagct 42817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 47132086 - 47132038
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| |||||||||||| ||| || |||| ||||||||||||    
T  47132086 gagaacttatgaaaacaacttatgtcatatccataaactgttttcagct 47132038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 281760 - 281889
Alignment:
Q  25 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 124  Q
    ||||||||||||||||||| ||||||||| |||| ||     |||||  ||| | |||||| || ||||| || |||||| |||||||||||||||||||    
T  281760 tagggtctgtttggattgacttacttgagattatgtagtgacataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctat 281859  T
Q  125 aagctgttttcagctattttccataagctc 154  Q
    ||| |||||||||||  ||||||| |||||    
T  281860 aagttgttttcagcttatttccatgagctc 281889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 2767716 - 2767785
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||||||||||||| ||| |||||||| ||||||||||||| ||||||||||| ||||| ||||||||||    
T  2767716 agactgcttaggagagcttgtggaaacagcttatgacatgtccataagctgtttccagct-ttttccataa 2767785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 1669775 - 1669824
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  1669775 ggagagcttatgaaaacaacttatgacatgtctataagctgttttcagct 1669824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 2460129 - 2460192
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||| ||  |||||||||||||    
T  2460129 gagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctc 2460192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 9667973 - 9668026
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  9667973 ggaaacaacttatgacatgtccataagctgttttcaacttatttccataagctc 9668026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 3155253 - 3155209
Alignment:
Q  105 acaacttatgacatgtctataagctgttttcagctattttccata 149  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  3155253 acaacttatgacatgtctataagctgttttcagcttatttccata 3155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 7785733 - 7785785
Alignment:
Q  102 gaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| ||||||||||||||||||| |||||||||||  |||||||||||||    
T  7785733 gaaacagcttatgacatgtctataagttgttttcagcttatttccataagctc 7785785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 20377894 - 20377942
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttc 135  Q
    |||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  20377894 ttaggagagcttatgaaaacaacttatgacatgtctataagttgttttc 20377942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 24670512 - 24670449
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||| |||||||||||||||||||| ||| |||||| ||||||  ||| |||||||||    
T  24670512 gagaacttatagaaacaacttatgacatgtcaatatgctgttatcagcttattttcataagctc 24670449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 4420730 - 4420672
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| ||||||| |||||||||||  |||||||||||||||||  |||||||||||||    
T  4420730 cttatagaaacaaattatgacatgttcataagctgttttcagcttatttccataagctc 4420672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 9027665 - 9027607
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||| ||||||||||||||| ||||| |||||||||||  ||| |||||||||    
T  9027665 cttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctc 9027607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 32917300 - 32917246
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    |||||| || ||||| |||||||||||||||||||||||||| ||||||| ||||    
T  32917300 agactgtttgggagagcttatggaaacaacttatgacatgtccataagctttttt 32917246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 33498777 - 33498651
Alignment:
Q  25 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 124  Q
    |||||||||||| |||||| ||| ||||| ||||| |   ||| || | ||||| |||||  || | ||| |||||| ||||||||||||||||||||||    
T  33498777 tagggtctgtttagattgacttatttgaggttatcaaccggtaaaaacacttctgagactttttggtagagcttatgaaaacaacttatgacatgtctat 33498678  T
Q  125 aagctgttttcagctattttccataag 151  Q
    | | | |||||||||  ||||||||||    
T  33498677 aggttattttcagcttatttccataag 33498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 34403958 - 34403884
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| ||||||||| ||| | ||||||||||||||||||  ||||| |||||||| ||  |||||||||||||    
T  34403958 agactgtttaggagaagttaagaaaacaacttatgacatgttcataaggtgttttcaccttatttccataagctc 34403884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 27595521 - 27595590
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||| ||| | |||||| || |||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataagctattttca 27595590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 30523753 - 30523692
Alignment:
Q  89 aggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||| ||||||||||||||||||| |||||  |||||||||||||| ||| |||| ||||    
T  30523753 aggagatcttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataa 30523692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 27909623 - 27909679
Alignment:
Q  98 tatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||  ||||||||||| ||||| |||||||||||  |||||||||||||    
T  27909623 tatggaaacaatatatgacatgtccataagttgttttcagcttatttccataagctc 27909679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 32577964 - 32578032
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 159  Q
    |||| |||||| |||||||||||||||||||  | ||||||||||||||  |||||||| |||| ||||    
T  32577964 gagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcag 32578032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 33832251 - 33832299
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| ||||    
T  33832251 gagaacttatgaaaacaacttatgacatgtttataagttgtttttagct 33832299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 34939605 - 34939537
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 159  Q
    |||| |||||||||||||||||||||| |||  |||| |||||||||||  ||||||||| ||| ||||    
T  34939605 gagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcag 34939537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 2455906 - 2455839
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| ||| |||||||||||||||||||||||| | |||| || |||||| ||  |||||||||||||    
T  2455906 ttagaagagcttatggaaacaacttatgacatgcccataaactattttcaacttatttccataagctc 2455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 6310227 - 6310266
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  6310227 ggagagcttatgaaaacaacttatgacatgtctataagct 6310266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 6537023 - 6536968
Alignment:
Q  107 aacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaat 162  Q
    ||||||||||||||  ||||| |||||||||||  ||||||||||||| |||||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctcttcagaat 6536968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 8364955 - 8365002
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||||||| |||| ||||||||| || |||||||||||||||    
T  8364955 agaacttatggaaataactgatgacatgtttacaagctgttttcagct 8365002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 10836903 - 10836844
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||||||||||||||||| ||||||||| || |||| |||| ||||| || |||||||||    
T  10836903 aacttatggaaacaacttctgacatgtccattagctattttaagctagttcccataagct 10836844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 27615251 - 27615310
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| ||||||||||||||||||||||||  ||||||| ||||||  || |||||||||    
T  27615251 gagaatttatggaaacaacttatgacatgttcataagctattttcaagtaatttccataa 27615310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 1575986 - 1575944
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    |||||||||| ||||||||||||||||||  ||||||||||||    
T  1575986 agaacttatgaaaacaacttatgacatgttcataagctgtttt 1575944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 2034430 - 2034472
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| |||||||||| || |||||||||||||||||    
T  2034430 ttatggaaacagcttatgacatttccataagctgttttcagct 2034472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 2117490 - 2117432
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||  |||| ||||||||    
T  2117490 cttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctc 2117432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 7148817 - 7148695
Alignment:
Q  32 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgt 131  Q
    ||||||| |||| ||| |||||||||||||   | |||||| ||| | ||| || | || ||| |||| |||||||||||||||| |||| ||||||| |    
T  7148817 tgtttggtttgacttatttgagcttatctagtcgcataagcacttgtgagagtgttcagcagagcttacggaaacaacttatgacttgtccataagctat 7148718  T
Q  132 tttcagctattttccataagctc 154  Q
    ||||| ||  ||| |||||||||    
T  7148717 tttcaacttattttcataagctc 7148695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 1019597 - 1019646
Alignment:
Q  100 tggaaacaacttatgacatgtctataagctgttttcagctattttccata 149  Q
    |||||||||||||| ||||||||||||| |||||| ||||  ||||||||    
T  1019597 tggaaacaacttataacatgtctataagttgtttttagcttatttccata 1019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 10616518 - 10616567
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| ||||||||||||||||||||||||||  |||| ||| |||||||    
T  10616518 ggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagct 10616567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 27693417 - 27693462
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    ||||| ||||||||||||||||||||||||  ||||||| ||||||    
T  27693417 gagaatttatggaaacaacttatgacatgttcataagctattttca 27693462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 139
Target Start/End: Original strand, 31668681 - 31668710
Alignment:
Q  110 ttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||||||||||||||||||||||    
T  31668681 ttatgacatgtctataagctgttttcagct 31668710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 2460930 - 2460966
Alignment:
Q  100 tggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  2460930 tggaaacaacttattacatgtctataagctattttca 2460966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 4246493 - 4246457
Alignment:
Q  100 tggaaacaacttatgacatgtctataagctgttttca 136  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  4246493 tggaaacaactcatgacatgtccataagctgttttca 4246457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 7901785 - 7901856
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||| | |||||| || | ||| |||||| |||||||||| || |||||||||| ||||||||||||    
T  7901785 ataagcccttgtgagactgtttggaagagcttatg-aaacaacttaagatatgtctataaactgttttcagct 7901856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 7945861 - 7945925
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| ||||| |||||||||||| ||||| ||| || |||||| ||||  |||||||||||||    
T  7945861 ggagaaattatgaaaacaacttatggcatgtttattagttgttttaagcttatttccataagctc 7945925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 28776657 - 28776621
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcag 137  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  28776657 ggaaacagcttatgacttgtctataagctgttttcag 28776621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 28798361 - 28798325
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcag 137  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  28798361 ggaaacagcttatgacttgtctataagctgttttcag 28798325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 31624181 - 31624137
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||| ||||| ||||||||||||  ||||||||||||||    
T  31624181 agaacttatgaaaacagcttatgacatgttcataagctgttttca 31624137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 31686341 - 31686389
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||  ||||||||||||||| || ||||| ||||||||||||    
T  31686341 gagaacttatcaaaacaacttatgacaagtttataatctgttttcagct 31686389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 33284330 - 33284290
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||| |||||||||||||||||| || ||||||||||||||    
T  33284330 cttagggaaacaacttatgacatttccataagctgttttca 33284290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 34404182 - 34404118
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||||||||| | ||| |||||| |||||| |||||||| ||  |||| ||||||||    
T  34404182 ggagaacttatggaaacaccctattacatgtatataagttgttttcaacttatttctataagctc 34404118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 34404702 - 34404750
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagc 138  Q
    |||||||||||| ||| | ||||||||||||  ||||||||||||||||    
T  34404702 ggagaacttatgaaaatatcttatgacatgtacataagctgttttcagc 34404750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 34939837 - 34939777
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| |||| ||||||| ||||||||||||| ||||  |||||||||||  |||||||||    
T  34939837 ggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataa 34939777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 7674751 - 7674692
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7674751 agactgcttggaagaacttatggaaacaacttatgacatgtttataaggtgttttcagct 7674692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 18700471 - 18700415
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||    
T  18700471 cttatggaaacaacttatgacatgtctataagttgttttcagct-ttatccataagct 18700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 35963337 - 35963271
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||||||||| | | ||||||||||| ||||| |||||||||||  ||||||||||||    
T  35963337 ttaggagaacttatggaaatagcgtatgacatgtccataagttgttttcagcttatttccataagct 35963271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 11700362 - 11700402
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcag 137  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  11700362 ttatggaaacaacttatgacatgtccataagctgttttcag 11700402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 10125696 - 10125759
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||||| ||||||||||||||||||  ||||| |||||||||||  ||| |||||||||    
T  10125696 gagaacttatgtaaacaacttatgacatgttgataaggtgttttcagcttattttcataagctc 10125759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 32172746 - 32172688
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 148  Q
    ||||| |||||||||||||||||||||||||| ||||||  |||||||||  |||||||    
T  32172746 ggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccat 32172688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 37690614 - 37690692
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttta 169  Q
    |||| |||||| | ||||| ||||||||||  |||||||||||||||||  |||||||||||||  || ||||||||||    
T  37690614 gagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataacttta 37690692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 40499700 - 40499742
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    |||||||| |||||||||||||||||||||||||| |||||||    
T  40499700 ttaggagagcttatggaaacaacttatgacatgtccataagct 40499742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 985716 - 985647
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccata 149  Q
    |||||||||||||||  ||||| ||| ||||||||||||||| | |||| ||||||||||  ||||||||    
T  985716 agactgcttaggagagattatgcaaataacttatgacatgtccacaagcggttttcagcttatttccata 985647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 11457185 - 11457148
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttt 133  Q
    |||||||||||||||||||||||||| |||||||||||    
T  11457185 cttatggaaacaacttatgacatgtccataagctgttt 11457148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 12467212 - 12467163
Alignment:
Q  104 aacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||||||| ||||||||||||||||||  ||| ||||||||    
T  12467212 aacaacttatgacatgtttataagctgttttcagcttattttcataagct 12467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 18704025 - 18704074
Alignment:
Q  102 gaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||||||||||| ||||||||||||| |||||||||||  ||||||||||    
T  18704025 gaaacaacttataacatgtctataagttgttttcagcttatttccataag 18704074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 38047798 - 38047895
Alignment:
Q  32 tgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    ||||| |||||  |||||||| ||||||||  | ||||||  ||| |  ||||| || ||||| |||||||||||||||||||||||||| |||||||    
T  38047798 tgtttagattggcttacttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataagct 38047895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 2468535 - 2468475
Alignment:
Q  80 agactgcttaggagaacttatggaaacaactt-atgacatgtctataagctgttttcagct 139  Q
    |||||| || ||||||||||||||||||| || |||||||||| |||||||||||| ||||    
T  2468535 agactgttttggagaacttatggaaacaattttatgacatgtccataagctgttttgagct 2468475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 37526177 - 37526253
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 167  Q
    |||| |||||| | ||||| ||||||||||  |||||||||||||||||  |||||||||||||  ||||| |||||    
T  37526177 gagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaactt 37526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 37588338 - 37588414
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 167  Q
    |||| |||||| | ||||| ||||| ||||  |||||||||||||||||  |||||||||||||  |||||||||||    
T  37588338 gagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataactt 37588414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 10272414 - 10272457
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||    
T  10272414 cttatagaaacaacttatgacatgtctgtaagttgttttcagct 10272457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 11297112 - 11297235
Alignment:
Q  29 gtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagc 128  Q
    ||||||||| ||||| ||| || ||||||||||   | |||| | ||| |||||||| ||   ||| ||||||||||||||||| |||||||| || |||    
T  11297112 gtctgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaacttaagacatgtcaattagc 11297211  T
Q  129 tgttttcagctattttccataagc 152  Q
    | |||||||||  ||| |||||||    
T  11297212 tattttcagcttattttcataagc 11297235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 15074730 - 15074789
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||| ||| |||| || |||||||| |||||||||||||||||  ||||||||||||    
T  15074730 aacttattgaagcaacgtacgacatgtccataagctgttttcagcttatttccataagct 15074789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 17368768 - 17368709
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||||||||| ||||||||||||||||||  ||| || ||||||||||  |||||||||    
T  17368768 gagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataa 17368709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 37611193 - 37611256
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||| ||||||||| ||||||||  ||||||||||||||| |  |||||||||||||    
T  37611193 gagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctc 37611256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 37787923 - 37787986
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||| ||||||||| ||||||||  ||||||||||||||| |  |||||||||||||    
T  37787923 gagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctc 37787986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 135
Target Start/End: Original strand, 38766524 - 38766567
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttc 135  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||    
T  38766524 agaacttatggaaacaacttatgacacgtccataagttgttttc 38766567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 42646827 - 42646792
Alignment:
Q  26 agggtctgtttggattgaattacttgagcttatcta 61  Q
    |||||||||||||||||| |||||||||||||||||    
T  42646827 agggtctgtttggattgacttacttgagcttatcta 42646792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 167
Target Start/End: Complemental strand, 3504818 - 3504760
Alignment:
Q  109 cttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 167  Q
    |||||||||||| | ||||||||||||||||  ||| |||||||||  |||||||||||    
T  3504818 cttatgacatgtttgtaagctgttttcagcttatttacataagctctccagaataactt 3504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 5951946 - 5952008
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||| ||||||||| |||||||||| | | ||||||| |||||||||||  ||||||||||||    
T  5951946 gagagcttatggaagcaacttatgatagggctataagttgttttcagcttatttccataagct 5952008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 7853734 - 7853688
Alignment:
Q  90 ggagaacttatggaaacaacttatgaca-tgtctataagctgttttc 135  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||    
T  7853734 ggagaacttatggaaacaacttatgacattgttcataagctgttttc 7853688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 18853107 - 18853041
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||| ||||| ||||| |||| |||||| |||| ||||||||| ||||  ||||||||||||    
T  18853107 ttaggagaagttatgaaaacagcttacgacatgcctattagctgtttttagcttatttccataagct 18853041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 25705648 - 25705682
Alignment:
Q  102 gaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||| ||||||||||||||||||||||||    
T  25705648 gaaacaacttgtgacatgtctataagctgttttca 25705682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 34117524 - 34117570
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    ||||| |||||||| ||||||||||||||| | ||||||||||||||    
T  34117524 ggagagcttatggagacaacttatgacatgcccataagctgttttca 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 17258860 - 17258929
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcag 159  Q
    ||||||| |||| ||| | ||||||||||||  |||||||||||||||||  ||| ||||||||| ||||    
T  17258860 ggagaacctatgaaaatagcttatgacatgttcataagctgttttcagcttattttcataagctcttcag 17258929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 17369427 - 17369480
Alignment:
Q  101 ggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||| ||||||||||||||||||| ||||||||| |  |||| ||||||||    
T  17369427 ggaaacagcttatgacatgtctataagttgttttcagattatttctataagctc 17369480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 37489062 - 37489103
Alignment:
Q  93 gaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    ||||||||| ||||||||||||||||||  ||||||||||||    
T  37489062 gaacttatgaaaacaacttatgacatgttgataagctgtttt 37489103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 499708 - 499768
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||||||||| ||||| ||||||||||||  | ||| |||||||||||  |||||||||    
T  499708 ggagaacttatgaaaacagcttatgacatgttaacaagttgttttcagcttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 2092452 - 2092392
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    ||||| ||||||||| | ||||||||||||| ||||||||||||  ||| ||| |||||||    
T  2092452 gagaagttatggaaatagcttatgacatgtccataagctgttttttgctttttaccataag 2092392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 2092522 - 2092582
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| ||||| ||||||||||||| |||||| ||||| |||||||| || |||| |||||    
T  2092522 ggagagcttattgaaacaacttatggcatgtccataagttgttttcaactttttttcataa 2092582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 6109576 - 6109512
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| |||||||||| || |||||| ||||| ||||| |||||||||||  |||||| ||||||    
T  6109576 ggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttccaaaagctc 6109512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 145
Target Start/End: Complemental strand, 9104209 - 9104173
Alignment:
Q  109 cttatgacatgtctataagctgttttcagctattttc 145  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  9104209 cttatgacatgtctataagctgttttcaactaatttc 9104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 14295598 - 14295550
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||| |||||| ||||| ||||||| ||||| |||||||||||||||||    
T  14295598 gagagcttatgaaaacagcttatgatatgtcgataagctgttttcagct 14295550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 28586743 - 28586807
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| |||||||||| | |||||||||| ||  ||||||||||||||||  |||| ||||||||    
T  28586743 ggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctc 28586807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 50800007 - 50800056
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  50800007 ggagaactaatgtaaacaacttatgacatgtctataagctgttttcagct 50800056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 6978941 - 6978988
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  6978941 agaacttattgaaataacttatgacatgtctataagctgttttcagct 6978988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 7367966 - 7368077
Alignment:
Q  25 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 124  Q
    ||||||||||||||||||| ||| ||||| ||||||| | | |||| | ||| | |||||| || ||||| || ||| ||||| |||||||||||| |||    
T  7367966 tagggtctgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgtttat 7368065  T
Q  125 aagctgttttca 136  Q
    |||||| |||||    
T  7368066 aagctgctttca 7368077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 27123330 - 27123393
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||| ||  |||||||||||||    
T  27123330 gagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctc 27123393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 27970144 - 27970087
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| |||||||||||||||||||||||||||||||||||   || |||||||||||    
T  27970144 ttatgaaaacaacttatgacatgtctataagctgttttcagtacttatccataagctc 27970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 1137813 - 1137741
Alignment:
Q  82 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| ||||||||||||||| ||||| ||||||||||||  ||||| ||||||||| |  |||||||||||||    
T  1137813 actgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctc 1137741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 2874603 - 2874663
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagc 152  Q
    |||||||||||||||||||||||||||||| |||| || ||||| |||  |||||||||||    
T  2874603 agaacttatggaaacaacttatgacatgtccataatctattttccgcttatttccataagc 2874663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 3176073 - 3176141
Alignment:
Q  82 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||| |||||||| |||||| ||||| |||||| |||||||||||| |||||||||||  |||||||||    
T  3176073 actgtttaggagagcttatgaaaacatcttatgtcatgtctataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 6987708 - 6987782
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| || ||||| |||||||| ||||||||||||||||| |||| || |||||| ||  |||||||||||||    
T  6987708 agactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctc 6987782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 25571361 - 25571304
Alignment:
Q  82 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||| |||||||||||||||||||||  |||||| ||||  |||||||||||||||||    
T  25571361 actgtttaggagaacttatggaaacagtttatgatatgttcataagctgttttcagct 25571304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 53315484 - 53315375
Alignment:
Q  25 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 124  Q
    ||||||||||||||||||| ||| ||||||||||| |   |||||||| | | |||||||  ||  |||| |||||| ||||||| ||| ||||||| ||    
T  53315484 tagggtctgtttggattgacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaacatatcacatgtccat 53315385  T
Q  125 aagctgtttt 134  Q
    ||||| ||||    
T  53315384 aagctatttt 53315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 4243656 - 4243617
Alignment:
Q  93 gaacttatggaaacaacttatgacatgtctataagctgtt 132  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  4243656 gaacttatggaaacaacttatgacatgtccataatctgtt 4243617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 11264404 - 11264330
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||| || ||||| | ||| ||| |||||||||||||||| |||| ||||||||| ||  |||||||||||||    
T  11264404 agactgtttgggagagcatatagaatcaacttatgacatgtccataaactgttttcaacttatttccataagctc 11264330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 19305019 - 19304961
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccat 148  Q
    |||||| || |||||||| ||||||||||||| ||||| |||||||||||  |||||||    
T  19305019 ggagaatttgtggaaacagcttatgacatgtccataagttgttttcagcttgtttccat 19304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 29467607 - 29467661
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| |||||  ||||||||||||| |||||||||||||||||  |||||||||    
T  29467607 cttatagaaacggcttatgacatgtccataagctgttttcagcttatttccataa 29467661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 32071954 - 32071912
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||||||||||||| ||| |||||||||||| ||||    
T  32071954 ttatggaaacaacttatgacacgtccataagctgttttaagct 32071912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 45128288 - 45128350
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||| ||||||||||||||| ||  |||||| || ||||||||||||||  ||||||||||||    
T  45128288 gagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagct 45128350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 2996665 - 2996620
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||| |||||| ||||||||||||||||||| ||||||| ||||||    
T  2996665 gagagcttatgaaaacaacttatgacatgtccataagcttttttca 2996620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 4691937 - 4691892
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||||||||||||||||||| | ||| | |||||||||||    
T  4691937 aacttatggaaacaacttatgacatgcccatatgttgttttcagct 4691892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 6428176 - 6428047
Alignment:
Q  25 tagggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctat 124  Q
    |||||| |||||| ||||| ||| |||||||||| ||   |||||||| ||| | |||| | ||  ||||  ||||| ||||||||||||||||||| ||    
T  6428176 tagggtttgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccat 6428077  T
Q  125 aagctgttttcagctattttccataagctc 154  Q
    ||| || ||| |||   |||||||||||||    
T  6428076 aagttgatttaagcatatttccataagctc 6428047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 23676783 - 23676727
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||||||||| ||| ||||||| ||||||| ||||  ||||||||||||    
T  23676783 cttatggaaacaacttatggcatatctataa-ctgttttaagcttatttccataagct 23676727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 9841158 - 9841114
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    ||||||| ||| |||||||| ||||||||||| ||||||||||||    
T  9841158 ggagaacatatcgaaacaacatatgacatgtccataagctgtttt 9841114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 14011307 - 14011263
Alignment:
Q  110 ttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||    
T  14011307 ttatcacatgtctttaagctgttttcagcttatttccataagctc 14011263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 20936210 - 20936266
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||||| ||||||||||||| ||||  |||||||||||||| ||  |||||||||    
T  20936210 aacttatgaaaacaacttatgatatgttcataagctgttttcaccttatttccataa 20936266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 21592983 - 21593043
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| ||||| ||| || |||||||||||| ||||||||| ||||||||  |||||||||    
T  21592983 ggagagcttattgaagcagcttatgacatgtttataagctgctttcagcttatttccataa 21593043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 21953041 - 21952997
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    ||||| |||||||||| ||||||||||||||| |||| |||||||    
T  21953041 ggagagcttatggaaagaacttatgacatgtccataacctgtttt 21952997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 22662224 - 22662288
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||| ||| ||||||||| ||||  ||||||| |||||||||  |||||||| ||||    
T  22662224 ggagaacttatgaaaaaaacttatgatatgttcataagctattttcagcttatttccatacgctc 22662288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 24370932 - 24370979
Alignment:
Q  94 aacttatggaaacaacttatgacatgtct--ataagctgttttcagct 139  Q
    ||||||||||||||||||||||||||| |  |||||| ||||||||||    
T  24370932 aacttatggaaacaacttatgacatgtatacataagccgttttcagct 24370979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 27124131 - 27124167
Alignment:
Q  100 tggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  27124131 tggaaacaacttattacatgtctataagctattttca 27124167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 53155352 - 53155304
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||| |||||| ||||||||||||||||||||||||  || ||||||||    
T  53155352 gagagcttatgcaaacaacttatgacatgtctataaattgctttcagct 53155304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 26410396 - 26410308
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctat-tttccataagctc 154  Q
    |||||| ||||| ||||||||| ||||| |||||||||||| || |||||||||| | |||||||||| |||| | |||||||||||||    
T  26410396 ataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtccagaagctgtttttagctttatttccataagctc 26410308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 11183625 - 11183574
Alignment:
Q  103 aaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctc 11183574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 14949969 - 14949910
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||| |||||||| |||||| ||| ||||||||||||||| |||||||||||||||||    
T  14949969 agactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagct 14949910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 6950415 - 6950337
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataacttt 168  Q
    ||||| |||||| ||||||| ||||||||||| ||||| |||||||||||  ||||||||||||| | || ||||||||    
T  6950415 ggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataagctctttaggataacttt 6950337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 10939523 - 10939451
Alignment:
Q  35 ttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaaca 107  Q
    ||||||||||||| ||||| |||||||   |||||||| ||||| |||||| ||||||||||||||| |||||    
T  10939523 ttggattgaattatttgagtttatctacctgtataagcacttctgagactgtttaggagaacttatgaaaaca 10939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 26479877 - 26479805
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaata 163  Q
    |||| ||||||||||||||||||| |||||||||||| | ||||||||   |||||||||||||  |||||||    
T  26479877 gagagcttatggaaacaacttatgtcatgtctataagtttttttcagcgtatttccataagctctccagaata 26479805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 34293326 - 34293438
Alignment:
Q  256 aatttcttg-ttcaaccaaggtcaccatcagcagtgatatacaagagccatgaagaaaaagtgctagctccatttactgctacattctcatctagaggac 354  Q
    ||||||||| |||||| ||| |||||||||||||||||| | |||||||||||||  ||| | | ||||||||||  |||| | || |||||||| || |    
T  34293326 aatttcttggttcaacaaagatcaccatcagcagtgatacataagagccatgaagtgaaaataccagctccatttgttgcttctttttcatctaggggtc 34293425  T
Q  355 caaatccaggatc 367  Q
    ||||| |||||||    
T  34293426 caaattcaggatc 34293438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 367
Target Start/End: Complemental strand, 12726896 - 12726785
Alignment:
Q  256 aatttcttgttcaaccaaggtcaccatcagcagtgatatacaagagccatgaagaaaaagtgctagctccatttactgctacattctcatctagaggacc 355  Q
    |||||||||||||||  || ||||| |||||||||||| | |||||||| ||||  ||| | | ||||||||||  |||| | || |||||||| || ||    
T  12726896 aatttcttgttcaacatagatcaccctcagcagtgatacataagagccaggaagtgaaaataccagctccatttgttgcttctttttcatctaggggtcc 12726797  T
Q  356 aaatccaggatc 367  Q
    ||||||||||||    
T  12726796 aaatccaggatc 12726785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 43504853 - 43504783
Alignment:
Q  81 gactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    ||||| || |||||||| ||| |||||||||| ||| ||| ||||||||||||||||||  ||||||||||    
T  43504853 gactgtttcggagaactgatgaaaacaacttacgacttgtttataagctgttttcagcttatttccataag 43504783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 11813082 - 11813131
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||||||||||| ||||||||| || ||| |||||||||||||    
T  11813082 ggagaacttatggaaacaatttatgacatatccataggctgttttcagct 11813131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 13000408 - 13000464
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||||| |||||||||||||||||| | ||| |||||||||||  ||||||||||||    
T  13000408 ttatggtaacaacttatgacatgtccacaagttgttttcagcttatttccataagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 25869251 - 25869303
Alignment:
Q  98 tatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||||| ||||||||||||||| ||||| |||||||||||  |||||||||    
T  25869251 tatggaaataacttatgacatgtccataagttgttttcagcttatttccataa 25869303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 30259206 - 30259146
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||| |||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||    
T  30259206 gagagcttatggaaacagcttatgatatgtctataagttgttttcagtttatttccataag 30259146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 39551186 - 39551230
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||    
T  39551186 ggagaatttatggaaacaacttatgacatgtccaaaagctgtttt 39551230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 43709349 - 43709309
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  43709349 cttatggaaataacttatgacatgtctataagctattttca 43709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 3090264 - 3090190
Alignment:
Q  64 agtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||| ||||| |||||  |||| ||| |||||| |||||||||||| ||||||  ||||||||||||||||    
T  3090264 agtataagctcttctgagactatttag-agatcttatgaaaacaacttatggcatgtcagtaagctgttttcagct 3090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 11569424 - 11569483
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||| ||| |||| |||||||||||| ||||||||||||  ||||| |||||||||||    
T  11569424 agactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagct 11569483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 30191095 - 30191178
Alignment:
Q  67 ataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||| ||| | |||||| || ||||| |||||||||||||||||||||||||  | ||  |||||||||||  |||||||||    
T  30191095 ataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttcaaaacttgttttcagcttatttccataa 30191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 30987969 - 30988012
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||    
T  30987969 gagagcttatggaaacaacttatgacatgtccataagctatttt 30988012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 45071467 - 45071428
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  45071467 ggagagcttatgaaaacaacttatgacatgtctataagct 45071428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 4560593 - 4560531
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||||| ||||||| |||||||  |||||||||||||| |  |||| ||||||||    
T  4560593 agaacttatggaaataacttataacatgtcagtaagctgttttcagattatttcgataagctc 4560531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 31875578 - 31875636
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||||||||||||||||| ||||||  |||||| ||  ||| |||||||||    
T  31875578 cttatggaaacaacttatgacatgtccataagccattttcaacttattttcataagctc 31875636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 40357084 - 40356972
Alignment:
Q  27 gggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatga---catgtcta 123  Q
    ||||||||||||||||| ||| ||||| ||||||| | |||||||| ||||  ||| || ||| |||  ||||| |||| | |||||||   |||||| |    
T  40357084 gggtctgtttggattgatttatttgagtttatctacaggtataagcacttcagagattgtttatgagggcttattgaaatagcttatgacaccatgtcca 40356985  T
Q  124 taagctgttttca 136  Q
    |||||||||||||    
T  40356984 taagctgttttca 40356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 42597512 - 42597470
Alignment:
Q  109 cttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||||||||||||||||||||||||||| ||  ||||||||||    
T  42597512 cttatgacatgtctataagctgttttcaacttatttccataag 42597470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 4055600 - 4055657
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||| ||||||||||||||| |||| ||||||||||||  ||||| |||||||    
T  4055600 ttatagaaataacttatgacatgtccataaactgttttcagcttatttccttaagctc 4055657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 8255484 - 8255439
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||||||||||| |||||||||  ||||| ||||||||    
T  8255484 gagaacttatggaaacaactaatgacatgtgcataagttgttttca 8255439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 10062118 - 10062167
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| ||||||| ||||  ||||||||| ||||||||||||||||||||    
T  10062118 ggagagcttatggcaacattttatgacatttctataagctgttttcagct 10062167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 10383975 - 10383914
Alignment:
Q  93 gaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||| ||||| |||||||||| |  ||||||||||| |||||  |||||||||||||    
T  10383975 gaacttatgaaaacagcttatgacattttcataagctgtttacagcttatttccataagctc 10383914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 11188122 - 11188179
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcag 137  Q
    |||||| |||||| |||| ||| ||||| ||||||||||||||||||  |||||||||    
T  11188122 agactgtttaggataactaatgaaaacagcttatgacatgtctataacttgttttcag 11188179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 11795166 - 11795121
Alignment:
Q  109 cttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||||||| |||| ||||||||||||  |||||||||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctc 11795121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 27119910 - 27119955
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||| |||| ||| |||||||||||||||| |||||||||||    
T  27119910 aacttatgaaaaccactaatgacatgtctataagttgttttcagct 27119955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 2458543 - 2458607
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||| | ||| |||||| |||||  ||||||||||||||| |  |||||||||||||    
T  2458543 ggagaacttatgaagacagcttatggcatgttcataagctgttttcagtttatttccataagctc 2458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 5088945 - 5088881
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| ||||||||||||  |||| ||||||| |||||||||||||| ||  |||| ||||||||    
T  5088945 ggagagcttatggaaacagtttataacatgtccataagctgttttcaacttatttcaataagctc 5088881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 11118974 - 11119022
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagc 138  Q
    ||||| |||||||| || |||||||||||||  ||||||||||||||||    
T  11118974 ggagagcttatggagactacttatgacatgttcataagctgttttcagc 11119022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 11770990 - 11771034
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||| ||||||||||||| ||||||||| | ||||||||    
T  11770990 agaacttatgaaaacaacttatgatatgtctatacgttgttttca 11771034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 12361284 - 12361208
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 167  Q
    |||| ||||| |||| | ||||||||||||| |||||||||||||| ||  ||||||| |||||  | |||||||||    
T  12361284 gagatcttatagaaatagcttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataactt 12361208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 26371057 - 26370997
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||| ||||||||||| |||||||||||||   | || |||||||||||| ||||||||||    
T  26371057 gagatcttatggaaactacttatgacatgtgcgtcagttgttttcagctaatttccataag 26370997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 32840952 - 32841012
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgaca-tgtctataagctgttttcagct 139  Q
    |||||| || |||||||||||| ||||||||||||||| |||  ||||| |||||||||||    
T  32840952 agactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagct 32841012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 34849207 - 34849135
Alignment:
Q  80 agactgcttaggagaacttatggaaacaactt-atgacatgtctataagctgttttcagctattttccataag 151  Q
    |||||| || |||||||| ||| ||||||||| |||||||||  |||||| ||||||||||  ||||||||||    
T  34849207 agactgtttgggagaactaatgaaaacaactttatgacatgttcataagccgttttcagctgatttccataag 34849135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 37740411 - 37740462
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccata 149  Q
    ||||||||||||||||||||||||| |||| || |||||||||  ||||||||    
T  37740411 ttatggaaacaacttatgacatgtccataa-ctattttcagcttatttccata 37740462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 39049359 - 39049319
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||| ||||||||||| ||||||| ||||||||||||||    
T  39049359 cttatgaaaacaacttataacatgtcaataagctgttttca 39049319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 42215283 - 42215347
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||| ||| ||||| |||||||| |||  |||||||||||||||||  ||| |||||||||    
T  42215283 ggagaactaatgaaaacagcttatgacttgttcataagctgttttcagcttatttacataagctc 42215347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 154
Target Start/End: Original strand, 159891 - 160014
Alignment:
Q  31 ctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctg 130  Q
    ||||||||||||  ||| |||||||||||||  | ||||| | ||| | | |||  || |||||||| |||||||||  ||||||||||||||||||| |    
T  159891 ctgtttggattggcttatttgagcttatctactaatataaacacttgtgaaactattttggagaactaatggaaacagtttatgacatgtctataagcag 159990  T
Q  131 ttttcagctattttccataagctc 154  Q
    |||||||||  |||||| ||||||    
T  159991 ttttcagcttatttccacaagctc 160014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 8820259 - 8820333
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||| |||| |||||||||||| ||| ||||||||  | |||||||||||||||  |||||||||||||    
T  8820259 agactgcttaagagaccttatggaaacagcttctgacatgttcacaagctgttttcagcttatttccataagctc 8820333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 34652019 - 34652077
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  34652019 cttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctc 34652077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 43529773 - 43529899
Alignment:
Q  28 ggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataag 127  Q
    |||||||||| ||||| ||| |||||||||||||   |||||||| ||||| | |||| || |||||| ||||| ||||| |||||| |||||  |||||    
T  43529773 ggtctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataag 43529872  T
Q  128 ctgttttcagctattttccataagctc 154  Q
    || ||||||| |  ||| |||||||||    
T  43529873 ctattttcagtttattttcataagctc 43529899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 14316122 - 14316171
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  14316122 ggagagcttatggaaacaacttatgacatatgtataagctgttttcagct 14316171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 28677576 - 28677713
Alignment:
Q  30 tctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    |||||||||||||| ||  |||||||||| ||   | |||||  || ||||||||| || |||||||||||| ||||| |||||||||| |  ||||| |    
T  28677576 tctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacattttcataagtt 28677675  T
Q  130 gttttcagctattttccataagctcgtcagaataactt 167  Q
    |||||| |||  |||||||||||||  || ||||||||    
T  28677676 gttttcggcttatttccataagctctccaaaataactt 28677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 787424 - 787376
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  787424 gagaacttatgaaaacagcttatgacatgtccataagctgttttcagct 787376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 1647332 - 1647265
Alignment:
Q  87 ttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||||||| ||||| |||||||||||   |||||||||||||||||  |||||||||||||    
T  1647332 ttagaagaacttatgaaaacagcttatgacatgctcataagctgttttcagcttatttccataagctc 1647265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 28803451 - 28803546
Alignment:
Q  34 tttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagct 129  Q
    |||||||||| ||| |||||||||||||   | |||||| | | | |||||| ||  |||||| |||||||||||||||||||||||| |||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataagct 28803546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 40158821 - 40158734
Alignment:
Q  80 agactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctcgtcagaataactt 167  Q
    |||||| || || ||||||||| ||||| |||||||||||| |||||| |||||||||||   || |||||||||  |||||||||||    
T  40158821 agactgattgggggaacttatgaaaacagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataactt 40158734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 44606089 - 44606136
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  44606089 agaacttatgaaaacaacttatgacatgtccataagttgttttcagct 44606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 1939323 - 1939373
Alignment:
Q  104 aacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctc 1939373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 17380661 - 17380607
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctatttt 144  Q
    ||||| |||||| ||||||||| ||||||||| ||||||||||||||||| ||||    
T  17380661 ggagatcttatgtaaacaacttgtgacatgtcaataagctgttttcagctttttt 17380607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 32821895 - 32821838
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||||||||||||||||| ||||||||||||||| |  |||| ||||||||    
T  32821895 ttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctc 32821838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 38388780 - 38388707
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctg-ttttcagctattttccataagctcgtcagaat 162  Q
    ||||||||||||| |||||||||||||||||  |||| ||| |||||||||  |||||||||| || |||||||    
T  38388780 ggagaacttatggtaacaacttatgacatgttcataaactgtttttcagcttatttccataagttcttcagaat 38388707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 9996895 - 9996803
Alignment:
Q  26 agggtctgtttggattgaattacttgagcttatctaaaagtataagcccttctaagactgcttaggagaacttatggaaacaacttatgacat 118  Q
    |||| |||||||| |||| ||| ||||||||||| |  || |||||  ||| | ||||||||| ||||| ||||| |||||||||||||||||    
T  9996895 agggcctgtttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacat 9996803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 11344753 - 11344793
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  11344753 cttatggaaacaacttatgacatgtccataaactgttttca 11344793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 37186277 - 37186341
Alignment:
Q  74 cttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagc 138  Q
    ||||||| |||| || |||||  |||| ||||||||||||||||||||| | |||||||||||||    
T  37186277 cttctaaaactgtttcggagagattatagaaacaacttatgacatgtctgtgagctgttttcagc 37186341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 154
Target Start/End: Complemental strand, 41817269 - 41817197
Alignment:
Q  82 actgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| ||||||||| ||||| ||||| ||||||||||||  ||||  |||||||||||  |||||||||||||    
T  41817269 actgtttaggagaatttatgaaaacatcttatgacatgttgataatttgttttcagcttatttccataagctc 41817197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 43985290 - 43985238
Alignment:
Q  102 gaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||||||||||||||||||| ||||||| |||||| ||  |||||||||||||    
T  43985290 gaaacaacttatgacatgtccataagcttttttcaacttgtttccataagctc 43985238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 1830138 - 1830075
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||| |||||||||||| ||||||||||||| ||| |  ||||||||||  ||||||||||||    
T  1830138 ggagagcttatggaaacatcttatgacatgtccatagggagttttcagcttatttccataagct 1830075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 9878665 - 9878704
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttc 135  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  9878665 cttatggaaacaacttatgacatgtccataagttgttttc 9878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 10285947 - 10285892
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataag 151  Q
    |||||| ||| ||||||||||||||| |||||||||||||| ||  ||||||||||    
T  10285947 cttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataag 10285892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 30538156 - 30538199
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||    
T  30538156 cttatagaaacaacttatgacatgtccataagttgttttcagct 30538199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 41032933 - 41032992
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||||||| |||||||||| |  |||||||||||| |||||||||||  |||||||||    
T  41032933 gagaacttatagaaacaacttcttccatgtctataagttgttttcagcttatttccataa 41032992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 43065428 - 43065491
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||| ||||||||||||||||||| ||||  |||||||||||  |||| ||||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctc 43065491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 14451040 - 14451090
Alignment:
Q  103 aaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||||||| | |||||||||||||||||  |||||| |||||    
T  14451040 aaacaacttatgacatgaccataagctgttttcagcttatttccacaagct 14451090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 27237872 - 27237930
Alignment:
Q  92 agaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||||||| |||||| ||||||||||||  |||||||||||| ||||  |||||||||    
T  27237872 agaacttatagaaacagcttatgacatgtacataagctgtttttagcttatttccataa 27237930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 45314960 - 45314914
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcag 137  Q
    ||||||||||| |||||||||||||||| | |||||| |||||||||    
T  45314960 gagaacttatgtaaacaacttatgacatatttataagttgttttcag 45314914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 4550849 - 4550796
Alignment:
Q  81 gactgcttaggagaacttatggaaacaacttatgacatgtctataagctgtttt 134  Q
    ||||| || ||||| |||||||||||||||||||||||||  ||||||| ||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatgttcataagctatttt 4550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 6561424 - 6561391
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagct 129  Q
    ||||||||||||||||||||||| ||||||||||    
T  6561424 cttatggaaacaacttatgacatatctataagct 6561391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 15120276 - 15120227
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| |||||||||||||||||||||||||  || ||||||||| ||||    
T  15120276 ggagagcttatggaaacaacttatgacatgttcattagctgttttaagct 15120227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 16398449 - 16398494
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||| |||| ||||||||||||||||||| ||||||||| ||||    
T  16398449 gagaacatatgaaaacaacttatgacatgtccataagctgtcttca 16398494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 32106777 - 32106822
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||||||    
T  32106777 gagaacttatgaaaacagcttatgacatatctgtaagctgttttca 32106822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 33942228 - 33942179
Alignment:
Q  105 acaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    ||||||||||||||||  |||||||||||||||||| ||| ||| |||||    
T  33942228 acaacttatgacatgttcataagctgttttcagctaattttcattagctc 33942179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 153
Target Start/End: Original strand, 41809232 - 41809285
Alignment:
Q  100 tggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    |||||||||||||||||||||  ||||| |||||| ||||  ||||||||||||    
T  41809232 tggaaacaacttatgacatgttcataagttgtttttagcttatttccataagct 41809285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 1160655 - 1160711
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagct 153  Q
    ||||||||||||| ||||||||||| ||||| |||||| || |  ||||||||||||    
T  1160655 ttatggaaacaacctatgacatgtccataagttgtttttagtttatttccataagct 1160711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 1742009 - 1742069
Alignment:
Q  90 ggagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    ||||| |||||||||||||||||||||||||  ||||||| | |||| ||  |||||||||    
T  1742009 ggagagcttatggaaacaacttatgacatgtgcataagctatcttcaacttatttccataa 1742069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 10285439 - 10285399
Alignment:
Q  99 atggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| |||| |||||||||||| |||||||||||||||||    
T  10285439 atggagacaagttatgacatgtccataagctgttttcagct 10285399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 12215894 - 12215854
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||||| | ||||||||||||| ||||||||||||||    
T  12215894 cttatggaaatagcttatgacatgtccataagctgttttca 12215854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 33231930 - 33231991
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| ||||||||||| |||||||||  ||| |||||||||||||||||  ||| |||||||||    
T  33231930 gagagcttatggaaaccacttatgac--gtccataagctgttttcagctgatttgcataagctc 33231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 12682 - 12730
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  12682 gagaccttatggaaacaacttatgacatgtccataagttgttttcagct 12730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 6478 - 6535
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||||| ||||||||||||||||| ||||||||| |  |||||||||||||    
T  6478 ttatagaaacaacctatgacatgtctataagttgttttcagtttatttccataagctc 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 13498 - 13555
Alignment:
Q  97 ttatggaaacaacttatgacatgtctataagctgttttcagctattttccataagctc 154  Q
    |||| |||||||| ||||||||||||||||| ||||||||| |  |||||||||||||    
T  13498 ttatagaaacaacctatgacatgtctataagttgttttcagtttatttccataagctc 13555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 27685 - 27620
Alignment:
Q  74 cttctaagactgcttaggagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||| |||||| || ||||| |||||||||| | ||||||||||| ||||||| |||||||||||    
T  27685 cttctgagactgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagct 27620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 306413 - 306370
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    |||||||||||| ||||||||||| | |||||||||||||||||    
T  306413 cttatggaaacagcttatgacatgcccataagctgttttcagct 306370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 10600 - 10654
Alignment:
Q  96 cttatggaaacaacttatgacatgtctataagctgttttcagctattttccataa 150  Q
    |||||| |||||||| |||||||||| ||||| |||||||||||  |||||||||    
T  10600 cttatgtaaacaactaatgacatgtccataagttgttttcagcttatttccataa 10654  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 68960 - 69002
Alignment:
Q  94 aacttatggaaacaacttatgacatgtctataagctgttttca 136  Q
    |||||||| ||||| | ||||||||||||||||||||||||||    
T  68960 aacttatgaaaacagcgtatgacatgtctataagctgttttca 69002  T

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Target: scaffold0608 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 9615 - 9663
Alignment:
Q  91 gagaacttatggaaacaacttatgacatgtctataagctgttttcagct 139  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||| ||||    
T  9615 gagaacttatgaaaacaacttattacatgttcataagctgtttttagct 9663  T

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