View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8385_low_19 (Length: 316)
Name: NF8385_low_19
Description: NF8385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8385_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 47678364 - 47678665
Alignment:
| Q |
1 |
caaggtttgagtgatgcatataattgatagattctcgagcattggaattttgttttggcagaaagtgtcaaaaatttggggggcatttcccccaccaggt |
100 |
Q |
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| T |
47678364 |
caaggtttgagtgatgcatataattgatagattctcgagcattggaattttgttttggcagaaagtgtcaaaaatttggggggcatttcccccaccaggt |
47678463 |
T |
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| Q |
101 |
cacatggtaaaacacagaagtgagccaaaaaactatagtaccgcacattattgcaaagtcatttaaggcaaggcaaagaactgttgtggtctcagactca |
200 |
Q |
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| T |
47678464 |
cacatggtaaaacacagaagtgagccaaaaaactatagtaccgcacattattgcaaagtcatttaaggcaaggcaaagaactgttgtggtctcagactca |
47678563 |
T |
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| Q |
201 |
gacatatgtgtatgtggactcactcacctctgctgtaacttgcaaactaacaaatgctaaaaaaggctatgtattatggtcttcacattgcaacaacacc |
300 |
Q |
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| T |
47678564 |
gacata--tgtatgtggactcactcacctctgctgtaacttgcaaactaacaaatgctaaaaaaggctatgtattatggtcttcacattgcaacaacatc |
47678661 |
T |
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| Q |
301 |
aaac |
304 |
Q |
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|||| |
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| T |
47678662 |
aaac |
47678665 |
T |
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