View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8386_low_7 (Length: 322)
Name: NF8386_low_7
Description: NF8386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8386_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 31718215 - 31718515
Alignment:
| Q |
1 |
gcttcccatctttagctgaacagtgggaatgatgaagatgatcttactgatgaccgggaagatcttgatgaagcgggaaattcgtgtcaagatgcatcag |
100 |
Q |
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| T |
31718215 |
gcttcccatctttagctgaacagtgggaatgatgaagatgatcttactgatgaccgggaagatcttgatgaagcgggaaattcgtgtcaatatgcatcag |
31718314 |
T |
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| Q |
101 |
atgaatgccttaaaagtgaatcgatcgatttccatgtgcctagccaccctcagtatgatattgaacttcaataactctttggtttggaaatgttgtaaaa |
200 |
Q |
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| T |
31718315 |
atgaatgccttaagagtgaatcg----atttccatgtgcctagccacccccagtatgatattgaacttcaataactctttggtttggaaatgttgtaaaa |
31718410 |
T |
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| Q |
201 |
tttggctgttgcattggctcttgtttcaatcttttatggttgccgaagttaaagaaatatgaaatcaatactagacagtccttgactacaattgacatga |
300 |
Q |
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| T |
31718411 |
tttggctgttgcattggctcttgtttcaatcttttatggttgccgaagttaaagaaatatgaaatgaatactagacagtccttgactacaattgacatga |
31718510 |
T |
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| Q |
301 |
tgtgt |
305 |
Q |
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||||| |
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| T |
31718511 |
tgtgt |
31718515 |
T |
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