View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8386_low_9 (Length: 285)
Name: NF8386_low_9
Description: NF8386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8386_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 19 - 269
Target Start/End: Complemental strand, 44817449 - 44817199
Alignment:
| Q |
19 |
ccatttgctacagacctgcaagtttcagtggtgtaaggtttaatcaattcatcagatgcacaaaataattaccaaggtttgatgaacgagaaaactttca |
118 |
Q |
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| T |
44817449 |
ccatttgctacagacctgcaagtttcagtggtgtaaggtttaatcaattcatcagatgcacaaaataattaccaaggtttgatgaacgagaaaactttca |
44817350 |
T |
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| Q |
119 |
acctaatagtataggactaaaacaaacgaagaaaatggcaccttaacctataaaatgacaataaatgaaaggcatataacatctactcttgttgaacaat |
218 |
Q |
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| T |
44817349 |
acctaatagtataggactaaaacaaacgaagaaaatggcaccttaacctataaaatgacaataaatgaaaggcatataacatctactcttgttgaacaat |
44817250 |
T |
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| Q |
219 |
tattttacagcaatgaaaataatcaccaacaaaaaatctcaggtatgatgt |
269 |
Q |
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| T |
44817249 |
tattttacagcaatgaaaataatcaccaacaaaaaatctcaggtatgatgt |
44817199 |
T |
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