View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8388_high_7 (Length: 203)
Name: NF8388_high_7
Description: NF8388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8388_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 35169922 - 35170092
Alignment:
| Q |
17 |
cacacacgatatcggaaccaaagagctcgaaacaatcctccactcattaactccacattccatctccccattcctctcttgcattctcgacattcactcc |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35169922 |
cacacacgatatcggaaccaaagagctcgaaacaatcctccactcattaactccacattccatctccccattcctctcttgcattctcgacattcactcc |
35170021 |
T |
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| Q |
117 |
gaactaaaaccttccatcagaaaacaatctctcaaactcatcgcctcactcgccacagtttatgaatctct |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
35170022 |
gaactaaaaccttccatcagaaaacaatctctcaaactcatcgcttcactcgccacagtttatgaatctct |
35170092 |
T |
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