View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8391_high_6 (Length: 284)
Name: NF8391_high_6
Description: NF8391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8391_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 44542887 - 44543152
Alignment:
| Q |
1 |
atgaaacctgcaatggccaatgctccaccgaacacaagaagtcccgtaattccaccttcaccaccaataattatacttcctaaagaagtgtgtattttct |
100 |
Q |
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| T |
44542887 |
atgaaacctgcaatagccaatgctccaccgaacacaagaagtcccgtaattccaccttcaccaccaatagttatacttcctaaagaagtgtgtattttct |
44542986 |
T |
|
| Q |
101 |
tctttccatgtttgtttgttgtcttttcatcctccatcatcctttgtcaattgaagcaaagccaagagatgaagtttatttattatcttacaaatataat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44542987 |
tctttccatgtttgtttgttgtcttttcatcctccatcatcctttgtcaattgaagcaaagccaagagatgaagtttatttattatcttacaaatataat |
44543086 |
T |
|
| Q |
201 |
agaaggagtgatatcatgcatgcagagtgagacagaatcgggcttcttcgttttgttcggattcat |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44543087 |
agaaggagtgatatcatgcatgcagagtgagacagaatcgggcttcttcgttttgttcggattcat |
44543152 |
T |
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