View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8391_low_7 (Length: 296)

Name: NF8391_low_7
Description: NF8391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8391_low_7
NF8391_low_7
[»] chr3 (59 HSPs)
chr3 (160-279)||(32754247-32754366)
chr3 (160-279)||(52464821-52464940)
chr3 (160-279)||(44075243-44075362)
chr3 (160-279)||(54795893-54796012)
chr3 (180-279)||(916314-916413)
chr3 (160-279)||(8238997-8239116)
chr3 (160-279)||(28170031-28170150)
chr3 (160-279)||(22762151-22762271)
chr3 (160-279)||(42617605-42617723)
chr3 (160-238)||(46850608-46850686)
chr3 (160-225)||(7265157-7265222)
chr3 (160-225)||(33899928-33899993)
chr3 (160-225)||(44541219-44541284)
chr3 (160-228)||(22346984-22347052)
chr3 (160-238)||(15496365-15496443)
chr3 (160-238)||(26881722-26881800)
chr3 (160-238)||(52674884-52674962)
chr3 (160-238)||(54741908-54741986)
chr3 (169-238)||(7040992-7041061)
chr3 (18-67)||(32754101-32754150)
chr3 (169-238)||(45599161-45599230)
chr3 (160-225)||(48961218-48961283)
chr3 (160-225)||(50739255-50739320)
chr3 (160-225)||(50773535-50773600)
chr3 (160-225)||(54510295-54510360)
chr3 (169-225)||(4019028-4019084)
chr3 (169-225)||(14587294-14587350)
chr3 (169-225)||(29500444-29500500)
chr3 (169-225)||(30268991-30269047)
chr3 (169-225)||(52461139-52461195)
chr3 (169-225)||(53022777-53022833)
chr3 (160-247)||(36592102-36592189)
chr3 (171-225)||(875879-875933)
chr3 (17-67)||(8238853-8238903)
chr3 (169-215)||(29450771-29450817)
chr3 (160-238)||(41990660-41990738)
chr3 (160-225)||(19536808-19536873)
chr3 (176-225)||(35690115-35690164)
chr3 (160-225)||(36987647-36987712)
chr3 (160-225)||(37013086-37013151)
chr3 (160-213)||(37413671-37413724)
chr3 (160-212)||(5239957-5240009)
chr3 (169-225)||(12101370-12101426)
chr3 (161-225)||(54113520-54113584)
chr3 (172-215)||(47719597-47719640)
chr3 (172-215)||(54203669-54203712)
chr3 (182-228)||(47670440-47670486)
chr3 (169-215)||(48545221-48545267)
chr3 (17-67)||(54796112-54796161)
chr3 (160-225)||(34433448-34433513)
chr3 (172-225)||(39721372-39721425)
chr3 (169-238)||(46757671-46757740)
chr3 (160-205)||(54835875-54835920)
chr3 (19-67)||(5239818-5239866)
chr3 (169-225)||(13450387-13450442)
chr3 (181-225)||(20849310-20849354)
chr3 (165-225)||(22516900-22516960)
chr3 (169-225)||(33932395-33932451)
chr3 (181-225)||(35529766-35529810)
[»] scaffold0010 (4 HSPs)
scaffold0010 (160-282)||(50344-50466)
scaffold0010 (160-282)||(57877-57999)
scaffold0010 (25-67)||(50207-50249)
scaffold0010 (25-67)||(57740-57782)
[»] scaffold0016 (2 HSPs)
scaffold0016 (160-279)||(99479-99598)
scaffold0016 (17-67)||(99335-99385)
[»] chr8 (44 HSPs)
chr8 (160-279)||(45296641-45296760)
chr8 (160-279)||(19245536-19245655)
chr8 (160-279)||(19318720-19318839)
chr8 (160-279)||(22947585-22947699)
chr8 (160-279)||(30550813-30550932)
chr8 (160-279)||(44215562-44215681)
chr8 (160-279)||(20665450-20665569)
chr8 (160-260)||(39201618-39201718)
chr8 (192-279)||(41904875-41904962)
chr8 (160-279)||(12251334-12251453)
chr8 (160-279)||(39443755-39443874)
chr8 (160-238)||(17313436-17313514)
chr8 (18-67)||(22947795-22947844)
chr8 (160-225)||(39140707-39140772)
chr8 (160-238)||(44908591-44908669)
chr8 (169-238)||(7219488-7219557)
chr8 (160-225)||(16845128-16845193)
chr8 (169-238)||(17045904-17045973)
chr8 (160-225)||(24511626-24511691)
chr8 (169-238)||(27467823-27467892)
chr8 (169-238)||(41361099-41361168)
chr8 (160-248)||(14718967-14719055)
chr8 (169-241)||(34805900-34805972)
chr8 (169-225)||(43817872-43817928)
chr8 (171-225)||(16239076-16239130)
chr8 (172-238)||(38139425-38139491)
chr8 (160-225)||(11924868-11924933)
chr8 (172-225)||(14449517-14449570)
chr8 (160-225)||(26518704-26518769)
chr8 (172-249)||(35004369-35004446)
chr8 (160-225)||(37034926-37034991)
chr8 (18-67)||(39201471-39201520)
chr8 (160-225)||(39525552-39525617)
chr8 (160-225)||(39998076-39998141)
chr8 (181-225)||(6816155-6816199)
chr8 (160-224)||(41526409-41526473)
chr8 (17-67)||(12251546-12251596)
chr8 (17-67)||(39443612-39443662)
chr8 (160-238)||(41903024-41903102)
chr8 (172-225)||(39485935-39485988)
chr8 (172-225)||(42844411-42844464)
chr8 (172-213)||(45138971-45139012)
chr8 (172-224)||(38137628-38137680)
chr8 (169-225)||(39685532-39685588)
[»] chr7 (51 HSPs)
chr7 (160-279)||(42828738-42828857)
chr7 (160-279)||(42915454-42915573)
chr7 (160-279)||(4490892-4491011)
chr7 (160-279)||(47171738-47171857)
chr7 (160-279)||(20763009-20763128)
chr7 (160-279)||(33232484-33232603)
chr7 (160-279)||(34284626-34284745)
chr7 (160-279)||(19036189-19036308)
chr7 (160-279)||(20718328-20718447)
chr7 (160-279)||(29488575-29488694)
chr7 (160-279)||(38435703-38435822)
chr7 (160-279)||(42995441-42995560)
chr7 (160-224)||(20134996-20135060)
chr7 (160-215)||(4407959-4408014)
chr7 (17-67)||(42828951-42829001)
chr7 (160-225)||(23639323-23639388)
chr7 (160-225)||(43111117-43111182)
chr7 (169-225)||(12908020-12908076)
chr7 (161-225)||(15641218-15641282)
chr7 (160-212)||(19050261-19050313)
chr7 (169-225)||(29448624-29448680)
chr7 (169-225)||(40239804-40239860)
chr7 (169-225)||(43156300-43156356)
chr7 (169-225)||(44651786-44651842)
chr7 (169-248)||(10999222-10999301)
chr7 (169-215)||(18956217-18956263)
chr7 (17-67)||(47171590-47171640)
chr7 (160-225)||(4399974-4400039)
chr7 (172-225)||(4406534-4406587)
chr7 (160-213)||(4492356-4492409)
chr7 (160-225)||(20482383-20482448)
chr7 (160-225)||(37669177-37669242)
chr7 (160-225)||(38045757-38045822)
chr7 (160-225)||(41343228-41343293)
chr7 (169-225)||(16933394-16933450)
chr7 (169-225)||(16938777-16938833)
chr7 (169-225)||(17278265-17278321)
chr7 (160-212)||(17816688-17816740)
chr7 (160-200)||(38049170-38049210)
chr7 (169-225)||(40789288-40789344)
chr7 (182-225)||(5526226-5526269)
chr7 (160-211)||(27031149-27031200)
chr7 (160-215)||(32960714-32960769)
chr7 (17-67)||(38435915-38435965)
chr7 (17-67)||(42995298-42995348)
chr7 (160-213)||(3840116-3840169)
chr7 (18-67)||(4491105-4491154)
chr7 (172-225)||(36765688-36765741)
chr7 (160-225)||(40035937-40036002)
chr7 (160-225)||(41427063-41427127)
chr7 (19-67)||(17816544-17816592)
[»] chr1 (57 HSPs)
chr1 (160-279)||(16032947-16033066)
chr1 (160-279)||(49223249-49223368)
chr1 (160-279)||(5542107-5542226)
chr1 (160-279)||(28568610-28568729)
chr1 (160-279)||(36680027-36680146)
chr1 (160-279)||(12247626-12247740)
chr1 (160-279)||(17670085-17670204)
chr1 (160-279)||(18091379-18091498)
chr1 (160-277)||(41916339-41916456)
chr1 (160-225)||(11754136-11754201)
chr1 (160-238)||(9574963-9575041)
chr1 (17-67)||(17669939-17669989)
chr1 (171-225)||(31215772-31215826)
chr1 (171-225)||(31221527-31221581)
chr1 (169-247)||(41901585-41901663)
chr1 (17-67)||(49223107-49223157)
chr1 (160-225)||(7833647-7833712)
chr1 (160-225)||(11606371-11606436)
chr1 (169-238)||(33642721-33642790)
chr1 (169-238)||(40432093-40432162)
chr1 (169-225)||(43120686-43120742)
chr1 (169-225)||(44819812-44819868)
chr1 (169-225)||(45104291-45104347)
chr1 (160-215)||(38802407-38802462)
chr1 (160-238)||(17585617-17585695)
chr1 (169-215)||(25659727-25659773)
chr1 (169-215)||(33895134-33895180)
chr1 (17-67)||(36679884-36679933)
chr1 (160-238)||(40648469-40648547)
chr1 (160-225)||(3265218-3265283)
chr1 (160-241)||(23730187-23730267)
chr1 (169-238)||(33373715-33373784)
chr1 (172-225)||(33933029-33933082)
chr1 (160-225)||(43119022-43119087)
chr1 (160-225)||(44065351-44065416)
chr1 (160-225)||(46588000-46588065)
chr1 (169-225)||(33831838-33831894)
chr1 (169-225)||(33894001-33894057)
chr1 (160-224)||(39326953-39327017)
chr1 (169-225)||(46040395-46040451)
chr1 (172-215)||(17366272-17366315)
chr1 (16-67)||(23910988-23911039)
chr1 (169-224)||(33818004-33818059)
chr1 (169-224)||(33877472-33877527)
chr1 (170-225)||(39879049-39879104)
chr1 (172-215)||(45589729-45589772)
chr1 (160-238)||(14487219-14487297)
chr1 (160-206)||(15845854-15845900)
chr1 (173-215)||(36952631-36952673)
chr1 (169-238)||(11583266-11583334)
chr1 (171-244)||(16097457-16097530)
chr1 (160-213)||(17249137-17249190)
chr1 (160-241)||(31638308-31638389)
chr1 (19-67)||(18091227-18091275)
chr1 (19-67)||(41916548-41916596)
chr1 (162-206)||(43808835-43808879)
chr1 (181-225)||(47037038-47037082)
[»] chr4 (51 HSPs)
chr4 (160-279)||(41986138-41986257)
chr4 (160-279)||(51450067-51450186)
chr4 (160-279)||(24079927-24080046)
chr4 (160-279)||(26926797-26926916)
chr4 (160-279)||(43330001-43330120)
chr4 (164-272)||(9097333-9097441)
chr4 (160-279)||(10261856-10261975)
chr4 (160-279)||(21562480-21562599)
chr4 (160-279)||(19588007-19588127)
chr4 (160-279)||(26871463-26871582)
chr4 (160-277)||(29346083-29346200)
chr4 (160-277)||(35831847-35831964)
chr4 (160-225)||(28116742-28116807)
chr4 (160-225)||(52620721-52620786)
chr4 (160-228)||(1166738-1166806)
chr4 (160-228)||(1169220-1169288)
chr4 (169-249)||(11200943-11201023)
chr4 (169-225)||(11966913-11966969)
chr4 (169-225)||(55208393-55208449)
chr4 (169-228)||(36189964-36190023)
chr4 (17-67)||(19587861-19587911)
chr4 (160-225)||(7400116-7400181)
chr4 (160-225)||(8151301-8151366)
chr4 (160-225)||(17976546-17976611)
chr4 (169-238)||(53274738-53274807)
chr4 (169-225)||(7365905-7365961)
chr4 (169-225)||(17624772-17624828)
chr4 (169-225)||(27288382-27288438)
chr4 (169-248)||(34264517-34264596)
chr4 (171-225)||(26111492-26111546)
chr4 (172-225)||(13890902-13890955)
chr4 (160-225)||(24631011-24631076)
chr4 (160-225)||(32200626-32200691)
chr4 (169-238)||(34663963-34664032)
chr4 (160-225)||(41106040-41106105)
chr4 (160-225)||(55991921-55991986)
chr4 (160-200)||(30071440-30071480)
chr4 (181-225)||(32139536-32139580)
chr4 (169-225)||(32206502-32206558)
chr4 (173-225)||(45019174-45019226)
chr4 (172-215)||(23628946-23628989)
chr4 (160-215)||(28361412-28361467)
chr4 (160-215)||(34664921-34664976)
chr4 (172-238)||(8848051-8848117)
chr4 (17-67)||(26871675-26871725)
chr4 (25-58)||(9097549-9097582)
chr4 (172-225)||(39651843-39651896)
chr4 (172-225)||(46045709-46045762)
chr4 (160-225)||(55188270-55188335)
chr4 (160-215)||(37873562-37873618)
chr4 (169-225)||(40951054-40951110)
[»] chr6 (27 HSPs)
chr6 (160-279)||(33976098-33976218)
chr6 (160-279)||(12582316-12582435)
chr6 (160-265)||(28230954-28231059)
chr6 (160-279)||(247514-247633)
chr6 (175-279)||(3053809-3053913)
chr6 (17-67)||(28231142-28231192)
chr6 (17-67)||(33975951-33976001)
chr6 (169-238)||(559837-559906)
chr6 (240-279)||(3090722-3090761)
chr6 (160-225)||(7541205-7541270)
chr6 (160-225)||(18593518-18593583)
chr6 (169-225)||(33945728-33945784)
chr6 (172-215)||(6018492-6018535)
chr6 (169-224)||(17505596-17505651)
chr6 (160-215)||(28472323-28472378)
chr6 (160-215)||(29859512-29859567)
chr6 (17-67)||(3053989-3054039)
chr6 (169-238)||(20791656-20791725)
chr6 (160-225)||(32244477-32244542)
chr6 (172-225)||(34247664-34247717)
chr6 (169-225)||(34206920-34206976)
chr6 (160-215)||(10943068-10943123)
chr6 (172-215)||(10945820-10945863)
chr6 (160-238)||(3850326-3850404)
chr6 (17-67)||(12582532-12582582)
chr6 (160-225)||(24046471-24046536)
chr6 (160-225)||(29043307-29043371)
[»] chr5 (50 HSPs)
chr5 (160-279)||(37461966-37462085)
chr5 (160-260)||(3213106-3213206)
chr5 (160-279)||(18041042-18041162)
chr5 (160-279)||(33929080-33929194)
chr5 (160-277)||(43354611-43354728)
chr5 (163-225)||(28887281-28887343)
chr5 (160-279)||(9700094-9700213)
chr5 (160-247)||(29383613-29383700)
chr5 (160-206)||(15875676-15875722)
chr5 (17-67)||(33928935-33928985)
chr5 (160-238)||(7536745-7536823)
chr5 (172-238)||(8314941-8315007)
chr5 (160-225)||(789970-790035)
chr5 (160-225)||(3297733-3297798)
chr5 (169-238)||(4374749-4374818)
chr5 (160-225)||(14205512-14205577)
chr5 (160-225)||(29874577-29874642)
chr5 (160-225)||(31939742-31939807)
chr5 (169-225)||(24027768-24027824)
chr5 (165-225)||(36088683-36088743)
chr5 (160-215)||(24759081-24759136)
chr5 (160-215)||(25821321-25821376)
chr5 (172-215)||(28746237-28746280)
chr5 (25-67)||(3213304-3213346)
chr5 (160-238)||(16050669-16050747)
chr5 (160-238)||(30503653-30503731)
chr5 (160-238)||(30543996-30544074)
chr5 (160-238)||(42110788-42110866)
chr5 (160-225)||(2475182-2475247)
chr5 (160-225)||(15976582-15976647)
chr5 (160-225)||(28990842-28990906)
chr5 (160-225)||(36514968-36515033)
chr5 (160-225)||(43396622-43396687)
chr5 (172-224)||(10042908-10042960)
chr5 (19-67)||(43354468-43354516)
chr5 (169-224)||(665470-665525)
chr5 (172-215)||(788944-788987)
chr5 (172-215)||(2530197-2530240)
chr5 (160-215)||(27176394-27176449)
chr5 (160-215)||(30503449-30503504)
chr5 (160-215)||(30543792-30543847)
chr5 (160-215)||(32261634-32261689)
chr5 (172-215)||(42111728-42111771)
chr5 (160-215)||(42322975-42323030)
chr5 (160-215)||(42416899-42416954)
chr5 (17-67)||(9699950-9700000)
chr5 (17-67)||(37461819-37461869)
chr5 (160-225)||(14720282-14720347)
chr5 (172-213)||(39783070-39783111)
chr5 (160-224)||(5589376-5589439)
[»] chr2 (31 HSPs)
chr2 (160-279)||(3708548-3708667)
chr2 (160-279)||(35287167-35287281)
chr2 (160-279)||(11868749-11868868)
chr2 (160-279)||(35360142-35360261)
chr2 (160-238)||(4631314-4631392)
chr2 (17-67)||(35287378-35287428)
chr2 (160-225)||(668199-668264)
chr2 (160-225)||(20313155-20313220)
chr2 (160-225)||(1118081-1118146)
chr2 (160-225)||(3079818-3079883)
chr2 (160-225)||(7274773-7274838)
chr2 (169-238)||(8683770-8683839)
chr2 (160-225)||(17032721-17032786)
chr2 (160-225)||(17051057-17051122)
chr2 (160-225)||(18166742-18166807)
chr2 (172-241)||(34912764-34912833)
chr2 (160-225)||(36085854-36085919)
chr2 (169-225)||(971065-971121)
chr2 (160-224)||(1835786-1835850)
chr2 (169-225)||(8878231-8878287)
chr2 (172-238)||(3243189-3243255)
chr2 (160-225)||(24925993-24926058)
chr2 (169-238)||(31972393-31972462)
chr2 (160-213)||(38959564-38959617)
chr2 (172-225)||(40202328-40202381)
chr2 (15-67)||(1692699-1692751)
chr2 (173-225)||(3324171-3324223)
chr2 (169-225)||(5166378-5166434)
chr2 (173-225)||(35423894-35423946)
chr2 (160-213)||(36078481-36078533)
chr2 (181-225)||(32292308-32292352)
[»] scaffold0038 (2 HSPs)
scaffold0038 (160-265)||(31451-31556)
scaffold0038 (17-67)||(31639-31689)
[»] scaffold0095 (2 HSPs)
scaffold0095 (160-279)||(322-441)
scaffold0095 (160-224)||(1812-1876)
[»] scaffold0088 (1 HSPs)
scaffold0088 (160-279)||(55253-55372)
[»] scaffold1793 (1 HSPs)
scaffold1793 (160-225)||(175-240)
[»] scaffold1822 (1 HSPs)
scaffold1822 (160-225)||(344-409)
[»] scaffold0481 (2 HSPs)
scaffold0481 (160-225)||(4421-4486)
scaffold0481 (160-225)||(7552-7617)
[»] scaffold0003 (1 HSPs)
scaffold0003 (160-225)||(229183-229248)
[»] scaffold0006 (2 HSPs)
scaffold0006 (160-212)||(156492-156544)
scaffold0006 (232-279)||(156442-156489)
[»] scaffold0020 (1 HSPs)
scaffold0020 (160-215)||(132760-132815)
[»] scaffold0178 (1 HSPs)
scaffold0178 (160-225)||(7197-7262)
[»] scaffold0197 (1 HSPs)
scaffold0197 (160-248)||(25811-25899)
[»] scaffold0166 (1 HSPs)
scaffold0166 (160-215)||(1575-1630)
[»] scaffold0198 (1 HSPs)
scaffold0198 (181-238)||(15154-15211)
[»] scaffold0027 (1 HSPs)
scaffold0027 (172-225)||(137937-137990)
[»] scaffold0244 (1 HSPs)
scaffold0244 (160-238)||(7470-7548)
[»] scaffold0024 (1 HSPs)
scaffold0024 (160-213)||(110447-110500)


Alignment Details
Target: chr3 (Bit Score: 104; Significance: 7e-52; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 32754247 - 32754366
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  32754247 tttagcttctttcttaaaggcctttattttaactttgttttgaagtaacttttagaccgtaaaaaacctttgccaaacggtatttaagttcagctgggaa 32754346  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  32754347 cactgtttcactttcttctt 32754366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 52464940 - 52464821
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||||| |||| | |||||| ||||||||||||||||||||    
T  52464940 tttagcttctttcttaaaggtctttattttaactttgttttcaagtaacttttagaccgtaaaaatccttggtcaaacggtatctaagttcagctgggaa 52464841  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  52464840 cactgtttcactttcttctt 52464821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 44075362 - 44075243
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  44075362 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 44075263  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  44075262 cactgtttcactttcttctt 44075243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 54796012 - 54795893
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||||  ||||||||    
T  54796012 tttagattctttcttaaagacctttattttaactttgttttgaagtaacttttagaccataaaaaaccttggccaaacggtatctaagtttggctgggaa 54795913  T
Q  260 cactgtttcactttcttctt 279  Q
    | ||||| || |||||||||    
T  54795912 ctctgttacattttcttctt 54795893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 916314 - 916413
Alignment:
Q  180 cctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaacactgtttcactttcttctt 279  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||||||||||||||||||||||    
T  916314 cctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaacactgtttcactttcttctt 916413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 8238997 - 8239116
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||||||| |||| || | ||||||||||| | |||||| |||||||||| ||||| |||    
T  8238997 tttatcttcttttttaaagacctacattttaactttgttttgaagtaattttttgaccttaaaaaaccttggtcaaacggtatctaagtttagctgagaa 8239096  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  8239097 cactgtttcactttcttctt 8239116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 28170150 - 28170031
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||| ||||||||| |||  || |||| |||||||||||| ||| |||    
T  28170150 tttagcttctttcttaaaagcctttattttaaatttattttgaagtaacttttagaccgtaaaaaatcttgccctaacggtatctaagttcaactgtgaa 28170051  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||| ||||||||||    
T  28170050 cactgtttctctttcttctt 28170031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 22762271 - 22762151
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaa-aaacctttgccaaacgatatctaagttcagctggga 258  Q
    |||| |||||||| ||||  |||||||||||||||||||||||||||| ||| |  ||||||| ||||||| |||||||| ||||||||||||| ||| |    
T  22762271 tttaacttctttcgtaaatgcctttattttaactttgttttgaagtaagtttcaagtcgtaaacaaaccttggccaaacggtatctaagttcagttggaa 22762172  T
Q  259 acactgtttcactttcttctt 279  Q
    |||||||||||||||||||||    
T  22762171 acactgtttcactttcttctt 22762151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 42617723 - 42617605
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| ||||| ||||||||  |||||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||||| || |||||||||| ||||||    
T  42617723 tttaacttctctcttaaaggactttattttaactttgttttgaagtagcttt-agagcgtaaaaaagcttggccaaacggtacctaagttcagttgggaa 42617625  T
Q  260 cactgtttcactttcttctt 279  Q
    |||  |||||||||||||||    
T  42617624 cacaatttcactttcttctt 42617605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 46850686 - 46850608
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||| |||||||||||||||||||||||||||||||||||| || || ||||||||  ||||||||   ||||||||||    
T  46850686 tttaacttctttcttaaagacctttattttaactttgttttaaaatagcttttagactgtaaaaaagtcttgccaaacg 46850608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7265157 - 7265222
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7265157 tttagcttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7265222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 33899928 - 33899993
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| ||||||||| | |||||||||||||||||||| |||||||||||||| || ||||||    
T  33899928 tttagcttttttcttaaaaaactttattttaactttgttttaaagtaacttttagaccggaaaaaa 33899993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 44541219 - 44541284
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||| |||||||||||||||||||| ||  | |||||||| |||||||||    
T  44541219 tttagcttctttcttaaagaactttattttaactttgttttaaaagagcttttagaccgtaaaaaa 44541284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 22347052 - 22346984
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacct 228  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  22347052 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaacct 22346984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 15496443 - 15496365
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  15496443 tttagtttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctagccaaacg 15496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 26881722 - 26881800
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  26881722 tttaacttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaaacctggccaaacg 26881800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 52674884 - 52674962
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  52674884 tttaacttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 52674962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 54741908 - 54741986
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  54741908 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaaacctggccaaacg 54741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 7040992 - 7041061
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  7040992 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 7041061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 32754101 - 32754150
Alignment:
Q  18 aacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  32754101 aacaattcataaatatatgtcaagtccggggttcgaaccgcagacaccat 32754150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 45599230 - 45599161
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  45599230 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 45599161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 48961218 - 48961283
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  48961218 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 48961283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 50739255 - 50739320
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||| || ||||||    
T  50739255 tttagcttttttcttaaagagctttattttaactttattttaaagtagcttttagaccgaaaaaaa 50739320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 50773600 - 50773535
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||| || ||||||    
T  50773600 tttagcttttttcttaaagagctttattttaactttattttaaagtagcttttagaccgaaaaaaa 50773535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 54510360 - 54510295
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  54510360 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 54510295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 4019028 - 4019084
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  4019028 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 4019084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 14587350 - 14587294
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  14587350 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 14587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 29500444 - 29500500
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  29500444 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 29500500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 30269047 - 30268991
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  30269047 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 30268991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 52461139 - 52461195
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  52461139 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 52461195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 53022777 - 53022833
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  53022777 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 53022833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 36592189 - 36592102
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaag 247  Q
    |||||| | |||||||||||  ||||||||||||||||||| ||||| |||||||| || |||||| | | |||||||| || |||||    
T  36592189 tttagcctttttcttaaagagttttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacggtacctaag 36592102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 875879 - 875933
Alignment:
Q  171 tcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  875879 tcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 875933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 8238853 - 8238903
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||| |||||||| |||||| ||||||||| ||||||||||||||||||||    
T  8238853 gaactattcataactatatgccaagtccagagttcgaaccccggacaccat 8238903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 29450771 - 29450817
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  29450771 tttcttaaagaactttattttaactttgttttaaagtagcttttaga 29450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 41990738 - 41990660
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||| ||| ||||||| ||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  41990738 tttaacttttttcttatagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaaacatagccaaacg 41990660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 19536808 - 19536873
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| || || |||||||| || ||||||    
T  19536808 tttagcctttttcttaaagaactttattttaactttgttttaaattagcttttagaccgaaaaaaa 19536873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 35690164 - 35690115
Alignment:
Q  176 aagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| |||||||||||||||||||| |||||||||||||| || ||||||    
T  35690164 aagaactttattttaactttgttttaaagtaacttttagaccgaaaaaaa 35690115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 36987712 - 36987647
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  36987712 tttaacttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 36987647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 37013151 - 37013086
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  37013151 tttaacttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 37013086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 37413671 - 37413724
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| ||||||    
T  37413671 tttagcttttttcttaaaggactttattttaactttgttttaaagtagctttta 37413724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 5239957 - 5240009
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttt 212  Q
    |||| |||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  5239957 tttaacttctttcttaaaggcttttattttaattttattttgaagtaactttt 5240009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 12101426 - 12101370
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||  |||||||||||||||||||| ||||| |||||||| || ||||||    
T  12101426 tttcttaaagggctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 12101370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 54113520 - 54113584
Alignment:
Q  161 ttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||| ||||||||||  |||||||||||||||||||| |||||  ||||||| || ||||||    
T  54113520 ttagcttttttcttaaaggactttattttaactttgttttaaagtagtttttagaccgaaaaaaa 54113584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 47719597 - 47719640
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||    
T  47719597 cttaaagagctttattttaactttgttttaaagtagcttttaga 47719640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 54203712 - 54203669
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||    
T  54203712 cttaaagagctttattttaactttgttttaaagtagcttttaga 54203669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 47670486 - 47670440
Alignment:
Q  182 tttattttaactttgttttgaagtaacttttagatcgtaaaaaacct 228  Q
    ||||||||||||||||||| || || ||||||||||| |||||||||    
T  47670486 tttattttaactttgttttaaaatagcttttagatcgaaaaaaacct 47670440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 48545221 - 48545267
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    ||||||||||| ||||||||||| |||||||| ||||| ||||||||    
T  48545221 tttcttaaagagctttattttaattttgttttaaagtagcttttaga 48545267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 54796161 - 54796112
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| ||||||||||||||||||||| |||  ||||||||||||||||    
T  54796161 gaacaatgcataaatatatgtcaagtcca-ggtatgaaccccggacaccat 54796112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 34433513 - 34433448
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||  |||||||| ||||||||||| ||||| |||||||| || ||||||    
T  34433513 tttaacttttttcttaaaggactttatttaaactttgttttaaagtagcttttagaccggaaaaaa 34433448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 39721372 - 39721425
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  39721372 cttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 39721425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 46757671 - 46757740
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||| | |||||||||||||||||||| ||||| |||||| | || |||||| |||  |||||||    
T  46757671 tttcttaaaaagctttattttaactttgttttaaagtagcttttaaaccgaaaaaaatcttgaccaaacg 46757740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 54835875 - 54835920
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagt 205  Q
    |||| ||||||| ||||| |||||||||||||||||||||| ||||    
T  54835875 tttaacttcttttttaaaaacctttattttaactttgttttaaagt 54835920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 5239818 - 5239866
Alignment:
Q  19 acaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||| ||||||||||||  |||||| |||||||||||| |||||||||    
T  5239818 acaatgcataaatatatgcaaagtccggggttcgaaccctggacaccat 5239866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 13450387 - 13450442
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||| ||||||||||||||| ||||| ||||||||| | ||||||    
T  13450387 tttcttaaagagcttt-ttttaactttgttttaaagtagcttttagattggaaaaaa 13450442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 20849354 - 20849310
Alignment:
Q  181 ctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||||||| |||| |||||||||||||| || ||||||    
T  20849354 ctttattttaacttttttttaaagtaacttttagaccgaaaaaaa 20849310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 22516960 - 22516900
Alignment:
Q  165 cttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||  |||| |||||||||||||||  |||||| |||||||  ||||||||    
T  22516960 cttctttcttaaattccttaattttaactttgtttcaaagtaaattttagactgtaaaaaa 22516900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 33932451 - 33932395
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| ||||||||||||||||||||  ||||  ||||||| || ||||||    
T  33932451 tttcttaaagagctttattttaactttgttttagagtagtttttagaccgaaaaaaa 33932395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 35529810 - 35529766
Alignment:
Q  181 ctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||    
T  35529810 ctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 35529766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 99; Significance: 7e-49; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 50344 - 50466
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  50344 tttagcttctttcttaaaggcctttattttaactttgttttgaagtaactttaagaccgtaaaaaaccttagccaaacggtatctaagttcagctgggaa 50443  T
Q  260 cactgtttcactttcttcttgat 282  Q
    |||||||||| ||||||||||||    
T  50444 cactgtttcattttcttcttgat 50466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 57877 - 57999
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  57877 tttagcttctttcttaaaggcctttattttaactttgttttgaagtaactttaagaccgtaaaaaaccttagccaaacggtatctaagttcagctgggaa 57976  T
Q  260 cactgtttcactttcttcttgat 282  Q
    |||||||||| ||||||||||||    
T  57977 cactgtttcattttcttcttgat 57999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 50207 - 50249
Alignment:
Q  25 cataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||    
T  50207 cataaatatatgccaagtccggggttcgaaccccagacaccat 50249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 57740 - 57782
Alignment:
Q  25 cataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||    
T  57740 cataaatatatgccaagtccggggttcgaaccccagacaccat 57782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 99479 - 99598
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  99479 tttagcttcattcttaaagacctttattttaactttgttttgaaataacttttagaccgtaaaaaacctttgtcaaacggtatctaagttcagctgggaa 99578  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||| ||||||||    
T  99579 cactgtttcacattcttctt 99598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 99335 - 99385
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  99335 gaacaattcataaatatatgtcaagtccggggttcgaaccccggacaccat 99385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 4e-47; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 45296760 - 45296641
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||||||    
T  45296760 tttagcttctttcttaaaggcctttattttaactttgttttgaagtaacttttagaccgtaaaaaaccttgaccaaacggtatctaagttcagctgggaa 45296661  T
Q  260 cactgtttcactttcttctt 279  Q
    ||| ||||||||||||||||    
T  45296660 cacggtttcactttcttctt 45296641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 19245536 - 19245655
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| | |||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  19245536 tttagcttctttcttaaaggcatttattttaacttcattttgaagtaacttttagaacgtaaaaaaccttggccaaacggtatctaagttcagctgggaa 19245635  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  19245636 cattgtttcactttcttctt 19245655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 19318720 - 19318839
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| | |||||||||||||  ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  19318720 tttagcttctttcttaaaggcatttattttaacttcattttgaagtaacttttagaacgtaaaaaaccttggccaaacggtatctaagttcagctgggaa 19318819  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  19318820 cattgtttcactttcttctt 19318839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 22947699 - 22947585
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||      ||||||||||||||||||||    
T  22947699 tttagtttctttcttaaaggcctttattttaactttgttttaaagtaacttttagatcgtaaaaaacatttgcc-----gtatctaagttcagctgggaa 22947605  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  22947604 cagtgtttcactttcttctt 22947585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 30550932 - 30550813
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||   ||||||| |||||||||||||  |||||    
T  30550932 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaacctcgaccaaacggtatctaagttcagtcgggaa 30550833  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  30550832 cactgtttcactttcttctt 30550813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 44215681 - 44215562
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| || ||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  44215681 tttagtttctttcttaaaggcctttatttttacattgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 44215582  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  44215581 cactgtttcactttcttctt 44215562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 20665569 - 20665450
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||  ||||||| |||||||||||||  |||||    
T  20665569 tttagtttctttcataaaggcctttatttttactttgttttgaagtaacttttataatgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 20665470  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  20665469 cactgtttcactttcttctt 20665450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 39201618 - 39201718
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||| ||||||||||||||||||||    
T  39201618 tttatcttctttcttaaatgcctttattttaactttgttttgaagtaacttttagaccataaaaaaccttggcctaacggtatctaagttcagctgggaa 39201717  T
Q  260 c 260  Q
    |    
T  39201718 c 39201718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 192 - 279
Target Start/End: Original strand, 41904875 - 41904962
Alignment:
Q  192 ctttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaacactgtttcactttcttctt 279  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41904875 ctttgttttgtagtaacttttaaaccgtaaaaaaccttggccaaacggtatctaagttcagctgggaacactgtttcactttcttctt 41904962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 12251453 - 12251334
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||||||||  ||||| | ||||||    
T  12251453 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacgatatcagagttcggatgggaa 12251354  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| ||||||||||||    
T  12251353 aactgttacactttcttctt 12251334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 39443755 - 39443874
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||||||||  ||||| | ||||||    
T  39443755 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacgatatcagagttcggatgggaa 39443854  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| ||||||||||||    
T  39443855 aactgttacactttcttctt 39443874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 17313514 - 17313436
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| ||| ||||||||    
T  17313514 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcttggccaaacg 17313436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 22947844 - 22947795
Alignment:
Q  18 aacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  22947844 aacaattcataaatatatgtcaagttcggggttcgaaccccggacaccat 22947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 39140772 - 39140707
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||    
T  39140772 tttaacttttttcttaaagaactttattttaactttgttttaaagtaacttttagactgtaaaaaa 39140707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 44908591 - 44908669
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  44908591 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 44908669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 7219488 - 7219557
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  7219488 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 7219557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 16845128 - 16845193
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  16845128 tttagcctttttcttaaagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaa 16845193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 17045973 - 17045904
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  17045973 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 17045904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 24511626 - 24511691
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||| | |||||||||    
T  24511626 tttaacttttttcttaaagatctttattttaactttgttttaaagtagcttttaaaccgtaaaaaa 24511691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 27467823 - 27467892
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  27467823 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 27467892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 41361099 - 41361168
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  41361099 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 41361168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 14718967 - 14719055
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagt 248  Q
    |||||| | ||||||||||| ||||||||||||||| |||| ||||| |||||||| || |||||| | | |||||||| || ||||||    
T  14718967 tttagcctttttcttaaagagctttattttaactttattttaaagtagcttttagaccgaaaaaaagcctggccaaacggtacctaagt 14719055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 34805900 - 34805972
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgata 241  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||   | |||||||||||    
T  34805900 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggccaaacgata 34805972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 43817928 - 43817872
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  43817928 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 43817872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 16239130 - 16239076
Alignment:
Q  171 tcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  16239130 tcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 16239076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 38139425 - 38139491
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  38139425 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcatggccaaacg 38139491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 11924868 - 11924933
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| ||||||||||   ||||||||||||||||||| ||||| |||||||| || ||||||    
T  11924868 tttagcttttttcttaaagggttttattttaactttgttttaaagtagcttttagaccgaaaaaaa 11924933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 14449570 - 14449517
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | |||||||||||||||||||| |||||||||||||| || ||||||    
T  14449570 cttaaatagctttattttaactttgttttaaagtaacttttagaccgaaaaaaa 14449517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 26518769 - 26518704
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||| |||||||| |||| ||||| ||||||||||| ||||||    
T  26518769 tttagcctttttcttaaagagctttatcttaactttattttaaagtagcttttagatcgaaaaaaa 26518704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 35004369 - 35004446
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagtt 249  Q
    |||||| | |||||||||||||||||||| |||||  |||||||||| |||||| | | |||||||| || |||||||    
T  35004369 cttaaataactttattttaactttgttttaaagtagtttttagatcgaaaaaaaacctggccaaacggtacctaagtt 35004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 37034926 - 37034991
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || |||||||| || ||||||||||||||||| |||||| ||||||| || ||||||    
T  37034926 tttagctttttccttaaagagctatattttaactttgttttaaagtaaattttagaccgaaaaaaa 37034991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 39201471 - 39201520
Alignment:
Q  18 aacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||| |||||||||||||||||||| | |||||||||| |||||||||    
T  39201471 aacaatgcataaatatatgtcaagtccggagttcgaaccctggacaccat 39201520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 39525552 - 39525617
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||| ||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  39525552 tttaacttttttcttatagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 39525617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 39998076 - 39998141
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||| ||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  39998076 tttagcctttttcttatagagctttattttaactttgttttaaagtatcttttagaccgaaaaaaa 39998141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 6816155 - 6816199
Alignment:
Q  181 ctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  6816155 ctttattttaactttgttttaaagtagcttttagatcggaaaaaa 6816199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 41526409 - 41526473
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    ||||| || ||||||||||| |||||||||||||||||||| ||||| ||| |||| || |||||    
T  41526409 tttagtttttttcttaaagagctttattttaactttgttttaaagtagcttctagaccgaaaaaa 41526473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 12251596 - 12251546
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| || |||||||||||| |||| ||||| ||||||||||||||||    
T  12251596 gaacaatgcacaaatatatgtcaggtccggggtttgaaccccggacaccat 12251546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 39443612 - 39443662
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| || |||||||||||| |||| ||||| ||||||||||||||||    
T  39443612 gaacaatgcacaaatatatgtcaggtccggggtttgaaccccggacaccat 39443662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 41903102 - 41903024
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||||||||||   |||||||||| ||||||||| ||  | |||||||| ||||||||| | | ||||||||    
T  41903102 tttagcttctttcttaaaagactttattttatctttgttttaaaagagcttttagaccgtaaaaaagcctggccaaacg 41903024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 39485988 - 39485935
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| ||||| | |||||| || ||||||    
T  39485988 cttaaagagctttattttaactttgttttaaagtagcctttagaccgaaaaaaa 39485935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 42844411 - 42844464
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | |||||||||||||||||||| ||||| |||||||| || ||||||    
T  42844411 cttaaaaagctttattttaactttgttttaaagtagcttttagaccggaaaaaa 42844464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 45139012 - 45138971
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||||||| |||||||||||||||||||| ||||| ||||||    
T  45139012 cttaaagagctttattttaactttgttttaaagtagctttta 45138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 38137680 - 38137628
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    ||||||||  ||||||||||||||||||| ||||| |||||||| || |||||    
T  38137680 cttaaagagttttattttaactttgttttaaagtagcttttagaccgaaaaaa 38137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 39685532 - 39685588
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| ||||||||||||||| |||| || || |||||||| || ||||||    
T  39685532 tttcttaaagagctttattttaactttattttaaaatagcttttagaccgaaaaaaa 39685588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 42828857 - 42828738
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||| ||||    
T  42828857 tttaacttctttcttaaagacctttattttaactttgttttgaagtaacttttagaccgtaaaaaacatttgccaaacggtatctaagtttagctaggaa 42828758  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  42828757 cactgtttcactttcttctt 42828738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 42915454 - 42915573
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||  ||||||| ||||||||||||||||||||    
T  42915454 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttttggccgtaaaaaaccttgaccaaacggtatctaagttcagctgggaa 42915553  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  42915554 cactgtttcactttcttctt 42915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 4491011 - 4490892
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||| ||||||    
T  4491011 tttagtttctttcttaaaggcctttattttaactttgttttgaagtaatttttagaccgtaaaaaaccttggccaaacgctatctaagttcagttgggaa 4490912  T
Q  260 cactgtttcactttcttctt 279  Q
    |||| |||||||||||||||    
T  4490911 cactatttcactttcttctt 4490892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 47171738 - 47171857
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||| |||||||    
T  47171738 tttagcttctttcttaaaggtctttattttaactttgttttgaagtaacttttagaccgtaaaaaaccttggccaaactgtatctaagttcaactgggaa 47171837  T
Q  260 cactgtttcactttcttctt 279  Q
    || ||||||| |||||||||    
T  47171838 cattgtttcattttcttctt 47171857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 20763009 - 20763128
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  20763009 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 20763108  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  20763109 cactgtttcactttcttctt 20763128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 33232603 - 33232484
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  33232603 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 33232504  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  33232503 cactgtttcactttcttctt 33232484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 34284745 - 34284626
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  34284745 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 34284646  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  34284645 cactgtttcactttcttctt 34284626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 19036308 - 19036189
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| | |||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  19036308 tttagtttctttcttaaaggcttttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 19036209  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  19036208 cactgtttcactttcttctt 19036189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 20718328 - 20718447
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| | |||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  20718328 tttagtttctttcttaaaggcttttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 20718427  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  20718428 cactgtttcactttcttctt 20718447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 29488575 - 29488694
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  | |||    
T  29488575 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgagaa 29488674  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  29488675 cactgtttcactttcttctt 29488694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 38435822 - 38435703
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||||||||  ||||| | ||||||    
T  38435822 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacgatatcagagttcggatgggaa 38435723  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| ||||||||||||    
T  38435722 aactgttacactttcttctt 38435703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 42995441 - 42995560
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||||||||  ||||| | ||||||    
T  42995441 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacgatatcagagttcggatgggaa 42995540  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| ||||||||||||    
T  42995541 aactgttacactttcttctt 42995560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 20135060 - 20134996
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| ||||||||||| |||||    
T  20135060 tttagcttttttcttaaagggctttattttaactttgttttaaagtagcttttagatcgaaaaaa 20134996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 4408014 - 4407959
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  4408014 tttagcttttttcttaaagagctttattttaactttgttttaaagtagcttttaga 4407959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 42829001 - 42828951
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  42829001 gaacaattcataaatatatgccaaatccggggttcgaaccccggacaccat 42828951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 23639388 - 23639323
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||||    
T  23639388 tttagcctttttcttaaagaactttattttaactttgttttaaagtagctcttagatcgaaaaaaa 23639323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 43111117 - 43111182
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| ||||||||||| |||||||||||||| |||||||| || ||||||    
T  43111117 tttagcctttttcttaaagagctttattttaattttgttttgaagtagcttttagaccgaaaaaaa 43111182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 12908020 - 12908076
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  12908020 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 12908076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 15641218 - 15641282
Alignment:
Q  161 ttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||||||||||| ||||||| ||||||||| || || || |||||||| |||||||||    
T  15641218 ttagcttctttcttaaagaactttattgtaactttgtattaaaatagcttttagaccgtaaaaaa 15641282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 19050313 - 19050261
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttt 212  Q
    |||| |||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  19050313 tttaacttctttcttaaaggcctttattttaattttattttgaagtaactttt 19050261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 29448680 - 29448624
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  29448680 tttcttaaagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaa 29448624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 40239860 - 40239804
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  40239860 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 40239804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 43156300 - 43156356
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  43156300 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 43156356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 44651842 - 44651786
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||| || ||||||    
T  44651842 tttcttaaagggctttattttaactttgttttaaagtaacttttagaccgaaaaaaa 44651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 10999222 - 10999301
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagt 248  Q
    |||||||||||  ||||||||||||||||||| ||||| |||||||| || |||||| | | |||||||| || ||||||    
T  10999222 tttcttaaagagttttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacggtacctaagt 10999301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 18956263 - 18956217
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  18956263 tttcttaaagagctttattttaactttgttttaaagtagcttttaga 18956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 47171590 - 47171640
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| |||||||||||| ||||||| ||||||||||||| ||||||||    
T  47171590 gaacaatgcataaatatatgccaagtccggggttcgaaccccagacaccat 47171640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 4400039 - 4399974
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||  |||||||||||||||||||| ||||| |||||||| || ||||||    
T  4400039 tttaacttttttcttaaagggctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 4399974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 4406587 - 4406534
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  4406587 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 4406534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 4492409 - 4492356
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| ||||||    
T  4492409 tttaacttttttcttaaagagctttattttaactttgttttaaagtagctttta 4492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 20482383 - 20482448
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || ||||||  ||||||||||||||||||||| ||||| ||||| ||||| ||||||    
T  20482383 tttagctttttccttaaatgcctttattttaactttgttttaaagtagctttttgatcgaaaaaaa 20482448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 37669242 - 37669177
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  37669242 tttagcctttttcttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 37669177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 38045757 - 38045822
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  38045757 tttagcctttttcttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 38045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 41343293 - 41343228
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || |||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  41343293 tttagctttttccttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 41343228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 16933450 - 16933394
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| || || |||||||| || ||||||    
T  16933450 tttcttaaagagctttattttaactttgttttaaaatagcttttagaccgaaaaaaa 16933394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 16938833 - 16938777
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| || || |||||||| || ||||||    
T  16938833 tttcttaaagagctttattttaactttgttttaaaatagcttttagaccgaaaaaaa 16938777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 17278265 - 17278321
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||| ||||||||||| ||||| |||||||| || ||||||    
T  17278265 tttcttaaagagctttatttcaactttgttttaaagtagcttttagaccgaaaaaaa 17278321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 17816688 - 17816740
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttt 212  Q
    |||| |||||||||||| | |||||||||||| ||| ||||||||||||||||    
T  17816688 tttaacttctttcttaatggcctttattttaattttattttgaagtaactttt 17816740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 38049210 - 38049170
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgtttt 200  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  38049210 tttaacttctttcttaaagagctttattttaactttgtttt 38049170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 40789288 - 40789344
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||  |||||||| || ||||||    
T  40789288 tttcttaaagaactttattttaactttgttttaaagttgcttttagaccgaaaaaaa 40789344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 5526226 - 5526269
Alignment:
Q  182 tttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  5526226 tttattttaactttgttttaaagtagcttttagatcgaaaaaaa 5526269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 27031200 - 27031149
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttt 211  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||    
T  27031200 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttt 27031149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 32960769 - 32960714
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | |||||||||||  ||||||||||||||||||| ||||| ||||||||    
T  32960769 tttagcctttttcttaaagagttttattttaactttgttttaaagtagcttttaga 32960714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 38435965 - 38435915
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| || |||||||||||| |||| ||||| ||||||||||||||||    
T  38435965 gaacaatgcacaaatatatgtcaggtccggggtttgaaccccggacaccat 38435915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 42995298 - 42995348
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| || |||||||||||| |||| ||||| ||||||||||||||||    
T  42995298 gaacaatgcacaaatatatgtcaggtccggggtttgaaccccggacaccat 42995348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 3840116 - 3840169
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||| |||||||||||||   |||||||||||||||||||| ||||| ||||||    
T  3840116 tttaacttctttcttaaaattctttattttaactttgttttaaagtagctttta 3840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 4491154 - 4491105
Alignment:
Q  18 aacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||| |||||||||||| ||||||   |||||||||||||||||||||    
T  4491154 aacaatgcataaatatatgccaagtctgaggttcgaaccccggacaccat 4491105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 36765688 - 36765741
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| || || |||||||| || ||||||    
T  36765688 cttaaagaactttattttaactttgttttaaaatagcttttagaccgaaaaaaa 36765741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 40036002 - 40035937
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| |||||||||||  |||||||||||||| |||| ||||| |||||||| || ||||||    
T  40036002 tttaccttttttcttaaagagttttattttaactttattttaaagtagcttttagaccgaaaaaaa 40035937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 41427063 - 41427127
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| |||||||||||  ||||||||||||||||||| ||||| |||||||| || ||||||    
T  41427063 tttaacttttttcttaaagaa-tttattttaactttgttttaaagtagcttttagaccgaaaaaaa 41427127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 17816544 - 17816592
Alignment:
Q  19 acaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||| ||||||||||||  |||||| |||||||||||| |||||||||    
T  17816544 acaatgcataaatatatgcaaagtccggggttcgaaccctggacaccat 17816592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 16033066 - 16032947
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  16033066 tttaacttttttcttaaagacctttattttaactttgttttgaagtaacttttagaccgtaaaaaacctttgtcaaacggtatctaagttcagctgggaa 16032967  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  16032966 cattgtttcactttcttctt 16032947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 49223249 - 49223368
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||||    
T  49223249 tttaacttctttcttaaaggcgtttattttaactttgttttgaagtaacttttagaccgtaagaaaccttggccaaacggtatctaagttcagctgggaa 49223348  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  49223349 cactgtttcactttcttctt 49223368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 5542107 - 5542226
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||||  ||||||    
T  5542107 tttagcttctttcttagagacctttattttaactttgttttgaagtaacttttagacggtaaaaaaccttggccaaacggtatctaagttcatatgggaa 5542206  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  5542207 caatgtttcactttcttctt 5542226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 28568729 - 28568610
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||||| ||    
T  28568729 tttagattctttcttaaaggcctttattttaactttgttttgaagtaacttttagaccgtaaaaaacattggccaaacggtatctaagttcagctggaaa 28568630  T
Q  260 cactgtttcactttcttctt 279  Q
    | ||||| ||||||||||||    
T  28568629 ctctgttacactttcttctt 28568610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 36680027 - 36680146
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||  ||||||||||||||||| ||    
T  36680027 tttaacttctctcttaaagacctttattttaactttgttttgaattaacttttagaccgtaaaaaatctttgtcaaacagtatctaagttcagctggaaa 36680126  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  36680127 cattgtttcactttcttctt 36680146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 12247740 - 12247626
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||      ||||||||||||||||||||    
T  12247740 tttagtttctttcttaaaggcctttattttaactttgttttaaagtaacttttagatcgtaaaaaacatttgcc-----gtatctaagttcagctgggaa 12247646  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  12247645 cagtgtttcactttcttctt 12247626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 17670085 - 17670204
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||||| ||||||||  |||    
T  17670085 tttagcttctttcttaaatgtctttattttaactttgttttgaagtaacttttagaccgtaaaaaatctttgtcaaacggtatctacgttcagctcagaa 17670184  T
Q  260 cactgtttcactttcttctt 279  Q
    ||| |||||||||| |||||    
T  17670185 caccgtttcacttttttctt 17670204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 18091379 - 18091498
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || |||||||| | ||||||| ||| | |||||| || |||||||||||||||||    
T  18091379 tttagcttctttcttaaaggcctttattttaactttgttttgaactagcttttagaccataaaaaagcttggtcaaacggtacctaagttcagctgggaa 18091478  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||||||||||| ||||    
T  18091479 tactgtttcactttcctctt 18091498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 41916456 - 41916339
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| ||||||| |||||| |||||||||| | ||| ||||||||||||||||||| ||  |||||  || |||| ||  || |||||||||| ||||||    
T  41916456 tttaacttctttattaaaggcctttattttgattttattttgaagtaacttttagaccgctaaaaagtttggccagactgtacctaagttcagttgggaa 41916357  T
Q  260 cactgtttcactttcttc 277  Q
     |||||||||||||||||    
T  41916356 tactgtttcactttcttc 41916339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 11754201 - 11754136
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  11754201 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagatcgaaaaaaa 11754136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 9574963 - 9575041
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  9574963 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 9575041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 17669939 - 17669989
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||    
T  17669939 gaacaattcataaatatatgccaagtccggggttcgaaccccgaacaccat 17669989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 31215826 - 31215772
Alignment:
Q  171 tcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  31215826 tcttaaagagctttattttaactttgttttaaagtagcttttagatcgaaaaaaa 31215772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 31221581 - 31221527
Alignment:
Q  171 tcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  31221581 tcttaaagagctttattttaactttgttttaaagtagcttttagatcgaaaaaaa 31221527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 41901663 - 41901585
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaag 247  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | |||||||| || |||||    
T  41901663 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacggtacctaag 41901585  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 49223107 - 49223157
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  49223107 gaacaattcaaaaatatatgccaagtccggggttcgaaccccggacaccat 49223157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7833647 - 7833712
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7833647 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7833712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 11606436 - 11606371
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| |||| |||||||||||||    
T  11606436 tttaacttatttcttaaagacatttattttaactttattttaaagtagctttaagatcgtaaaaaa 11606371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 33642721 - 33642790
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  33642721 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 33642790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 40432162 - 40432093
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  40432162 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 40432093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 43120742 - 43120686
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  43120742 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 43120686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 44819868 - 44819812
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||  ||||||||    
T  44819868 tttcttaaatacctttattttaactttgttttaaagtagcttttagactgtaaaaaa 44819812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 45104291 - 45104347
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||  ||||| ||||||||||| ||||||    
T  45104291 tttcttaaagagctttattttaactttgtttaaaagtagcttttagatcgaaaaaaa 45104347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 38802407 - 38802462
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  38802407 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttaga 38802462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 17585617 - 17585695
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | |||||||||||  ||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  17585617 tttagcctttttcttaaagagttttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 17585695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 25659773 - 25659727
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  25659773 tttcttaaagagctttattttaactttgttttaaagtagcttttaga 25659727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 33895180 - 33895134
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  33895180 tttcttaaagagctttattttaactttgttttaaagtagcttttaga 33895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 36679884 - 36679933
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  36679884 gaacaattcataaa-atatgccaagtccggggttcgaaccccggacaccat 36679933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 40648547 - 40648469
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||||||||||||||||| |||||||| ||||||||||| ||| | |||||| |  |||||||| | | ||||||||    
T  40648547 tttagcttctttcttaaagagctttatttgaactttgttttaaaggagcttttaaacggtaaaaaagcctggccaaacg 40648469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 3265218 - 3265283
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| ||||||||||||||||||||  |||| |||||||| || ||||||    
T  3265218 tttagcctttttcttaaagaactttattttaactttgttttagagtagcttttagaccgaaaaaaa 3265283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 23730267 - 23730187
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgata 241  Q
    |||||||| || |||||||| |||||||||||||||| ||| ||||| |||||||| || |||||| | | |||||||||||    
T  23730267 tttagcttattccttaaagagctttattttaactttg-tttaaagtagcttttagaccggaaaaaagcctggccaaacgata 23730187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 33373784 - 33373715
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||| || |||||| | | ||||||||    
T  33373784 tttcttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaagcctggccaaacg 33373715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 33933029 - 33933082
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  33933029 cttaaagaactttattttaactttgttttaaagtagcttttagaacgaaaaaaa 33933082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 43119087 - 43119022
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| |||||||||||  |||||||||| |||||||| ||||| ||||||||||| ||||||    
T  43119087 tttaacttttttcttaaagagttttattttaattttgttttaaagtagcttttagatcgaaaaaaa 43119022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 44065416 - 44065351
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| |||||||||||||| |||| |||||||||||||||| ||||   ||||||| |||||||||    
T  44065416 tttaacttctttcttaaagcccttaattttaactttgttttaaagtcgtttttagaccgtaaaaaa 44065351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 46588065 - 46588000
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| ||||||||||||||||||||  |||| |||||||| || ||||||    
T  46588065 tttagcctttttcttaaagagctttattttaactttgttttagagtagcttttagaccgaaaaaaa 46588000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 33831894 - 33831838
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  33831894 tttcttaaagagctttattttaactttgttttaaagtagattttagaccgaaaaaaa 33831838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 33894057 - 33894001
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  33894057 tttcttaaagagctttattttaactttgttttaaagtagattttagaccgaaaaaaa 33894001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 39327017 - 39326953
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    |||||| | ||||||||||| ||||||||||||||| |||| ||||| |||||||| || |||||    
T  39327017 tttagcctttttcttaaagagctttattttaactttattttaaagtagcttttagaccgaaaaaa 39326953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 46040451 - 46040395
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||  |||||||||||||||||||| || || ||||||||||| ||||||    
T  46040451 tttcttaaagggctttattttaactttgttttaaaatagcttttagatcgaaaaaaa 46040395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 17366315 - 17366272
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||    
T  17366315 cttaaagagctttattttaactttgttttaaagtagcttttaga 17366272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 23911039 - 23910988
Alignment:
Q  16 tgaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||| |||||||| ||| ||||||| |||||||||||||||| |||||    
T  23911039 tgaacaatgcataaatacatgccaagtccggggttcgaaccccggataccat 23910988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 33818059 - 33818004
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    ||||||||||| |||||||||||||||||||| || || |||||||| || |||||    
T  33818059 tttcttaaagagctttattttaactttgttttaaaatagcttttagaccgaaaaaa 33818004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 33877527 - 33877472
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    ||||||||||| |||||||||||||||||||| || || |||||||| || |||||    
T  33877527 tttcttaaagagctttattttaactttgttttaaaatagcttttagaccgaaaaaa 33877472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 39879104 - 39879049
Alignment:
Q  170 ttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||  ||||||||||||||||||| |||||| ||||||| || ||||||    
T  39879104 ttcttaaagagttttattttaactttgttttaaagtaatttttagaccgaaaaaaa 39879049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 45589729 - 45589772
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||  |||||||||||||||||||| ||||||||||||||    
T  45589729 cttaaagggctttattttaactttgttttaaagtaacttttaga 45589772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 14487297 - 14487219
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| ||||||||||||||| |||| ||||| |||||| | || |||||| | | ||||||||    
T  14487297 tttagcctttttcttaaagagctttattttaactttattttaaagtagcttttaaaccgaaaaaaaacctggccaaacg 14487219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 15845854 - 15845900
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagta 206  Q
    |||| |||||||||||||| | || ||||||||||||||||||||||    
T  15845854 tttaacttctttcttaaagcctttaattttaactttgttttgaagta 15845900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 36952673 - 36952631
Alignment:
Q  173 ttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||    
T  36952673 ttaaagaactttattttaactttgttttaaagtagcttttaga 36952631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 11583266 - 11583334
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||| | | ||||||||    
T  11583266 tttcttaaagagctttattttaa-tttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 11583334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 16097457 - 16097530
Alignment:
Q  171 tcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatct 244  Q
    ||||||||  |||||||||||||||||||| ||||| ||||||||  | |||||| | | |||||| |||||||    
T  16097457 tcttaaaggactttattttaactttgttttaaagtagcttttagactgaaaaaaagcatggccaaatgatatct 16097530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 17249137 - 17249190
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||||| | ||||||||||  |||||||||||||||||||| ||||| ||||||    
T  17249137 tttagcctttttcttaaagggctttattttaactttgttttaaagtagctttta 17249190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 31638389 - 31638308
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgata 241  Q
    |||||||| || |||||||| |||||||||| ||||||||| ||||| |||| ||| || ||||||   | |||||||||||    
T  31638389 tttagctttttccttaaagagctttattttatctttgttttaaagtagctttaagaccgaaaaaaagtctggccaaacgata 31638308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 18091227 - 18091275
Alignment:
Q  19 acaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||| |||||||||||   |||||| ||||||||||||||||||||||    
T  18091227 acaatgcataaatatatacaaagtccggggttcgaaccccggacaccat 18091275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 41916596 - 41916548
Alignment:
Q  19 acaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||| |||| |||||||  |||| ||||||||||||||||||||||||    
T  41916596 acaatgcatacatatatgcaaagttcagggttcgaaccccggacaccat 41916548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 43808835 - 43808879
Alignment:
Q  162 tagcttctttcttaaagacctttattttaactttgttttgaagta 206  Q
    |||||| |||||||||||  ||||||||||||||||||| |||||    
T  43808835 tagcttttttcttaaagagttttattttaactttgttttaaagta 43808879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 47037082 - 47037038
Alignment:
Q  181 ctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||    
T  47037082 ctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 47037038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 41986257 - 41986138
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||||    
T  41986257 tttagcttctttcttaaaggcctttattttaactttattttcaagtaacttttagaccgtaaaaaaccttggtcaaacggtatctaagttcagctgggaa 41986158  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  41986157 cactgtttcactttcttctt 41986138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 51450067 - 51450186
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  51450067 tttagtttctttcttaaagacctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 51450166  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  51450167 cactgtttcactttcttctt 51450186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 24080046 - 24079927
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  24080046 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 24079947  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  24079946 cactgtttcactttcttctt 24079927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 26926916 - 26926797
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  26926916 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 26926817  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  26926816 cactgtttcactttcttctt 26926797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 43330001 - 43330120
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  43330001 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 43330100  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  43330101 cactgtttcactttcttctt 43330120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 164 - 272
Target Start/End: Complemental strand, 9097441 - 9097333
Alignment:
Q  164 gcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaacact 263  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||  ||| | |||||||||||||||| |    
T  9097441 gcttctttcttaaaggcctttattttaactttgttttgaagtaacttttagaccgtagaaaaccttagccaaacagtatatgagttcagctgggaacaat 9097342  T
Q  264 gtttcactt 272  Q
    |||||||||    
T  9097341 gtttcactt 9097333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 10261975 - 10261856
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||  ||||||| |||||||||||||  |||||    
T  10261975 tttagtttctttcataaaggcctttatttttactttgttttgaagtaacttttataatgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 10261876  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  10261875 cactgtttcactttcttctt 10261856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 21562480 - 21562599
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||  ||||||| |||||||||||||  |||||    
T  21562480 tttagtttctttcataaaggcctttatttttactttgttttgaagtaacttttataatgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 21562579  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  21562580 cactgtttcactttcttctt 21562599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 19588007 - 19588127
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttg-ccaaacgatatctaagttcagctggga 258  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| | |||||||||||  | ||    
T  19588007 tttagcttctttcttaaaagcctttattttaactttgtcttgaagtaacttttagaccgtaaaaaccctttgaccaaacggtgtctaagttcagtcgcga 19588106  T
Q  259 acactgtttcactttcttctt 279  Q
    ||||||||| |||||||||||    
T  19588107 acactgttttactttcttctt 19588127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 26871582 - 26871463
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||||||||  ||||| | ||||||    
T  26871582 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacgatatcagagttcggatgggaa 26871483  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| ||||||||||||    
T  26871482 aactgttacactttcttctt 26871463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 29346200 - 29346083
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| |||||||||| ||| |||||||||||| ||| ||||||||||||||||||| ||  |||||  || ||||||   || |||||||||| ||||||    
T  29346200 tttaacttctttcttgaaggcctttattttaattttattttgaagtaacttttagaccgctaaaaagtttggccaaattgtacctaagttcagttgggaa 29346101  T
Q  260 cactgtttcactttcttc 277  Q
    ||||||||||||||||||    
T  29346100 cactgtttcactttcttc 29346083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 35831964 - 35831847
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| |||||| ||||||| |||||| ||||| ||| |||| ||||||||||| || ||  |||||  || |||||||  || |||||||||| ||||||    
T  35831964 tttaacttcttccttaaaggcctttagtttaattttatttttaagtaactttttgaccgctaaaaagtttggccaaactgtacctaagttcagttgggaa 35831865  T
Q  260 cactgtttcactttcttc 277  Q
    ||||||||||||||||||    
T  35831864 cactgtttcactttcttc 35831847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 28116807 - 28116742
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||    
T  28116807 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgtaaaaaa 28116742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 52620721 - 52620786
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||| || ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||    
T  52620721 tttagtttttttcttaaagagctttattttaactttgttttaaagtaacttttagaccgaaaaaaa 52620786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 1166738 - 1166806
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacct 228  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  1166738 tttaacttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaacct 1166806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 1169220 - 1169288
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacct 228  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  1169220 tttaacttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaacct 1169288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 11200943 - 11201023
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagtt 249  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||   | ||||||||||| |||||||    
T  11200943 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggccaaacgatacctaagtt 11201023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 11966969 - 11966913
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||||    
T  11966969 tttcttaaagagttttattttaactttgttttaaagtaacttttagatcgaaaaaaa 11966913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 55208449 - 55208393
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||    
T  55208449 tttcttaaagagctttattttaactttgttttaaagtaacttttagaccgaaaaaaa 55208393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 36190023 - 36189964
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacct 228  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||||||    
T  36190023 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaacct 36189964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 19587861 - 19587911
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  19587861 gaacaatgcataaatatatgtcaagtccggggttcaaaccccggacaccat 19587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 7400181 - 7400116
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7400181 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7400116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 8151301 - 8151366
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||| || ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  8151301 tttagtttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 8151366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 17976546 - 17976611
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  17976546 tttagctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 17976611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 53274738 - 53274807
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  53274738 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 53274807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 7365905 - 7365961
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7365905 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7365961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 17624772 - 17624828
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  17624772 tttcttaaagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaa 17624828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 27288438 - 27288382
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  27288438 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 27288382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 34264596 - 34264517
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagt 248  Q
    |||||||||||  |||||||||||||||| || ||||| ||||||||||| |||||| | | |||||||| || ||||||    
T  34264596 tttcttaaagagttttattttaactttgtattaaagtagcttttagatcgaaaaaaagcctggccaaacggtacctaagt 34264517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 26111492 - 26111546
Alignment:
Q  171 tcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  26111492 tcttaaagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaa 26111546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 13890955 - 13890902
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  13890955 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 13890902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24631076 - 24631011
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||||||||||||| |||||||||||||||||| ||  ||||| |||||||| || ||||||    
T  24631076 tttaacttctttcttaaaaacctttattttaactttgattcaaagtagcttttagaccggaaaaaa 24631011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 32200691 - 32200626
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||| ||||| |||||||| |||||||||||||||||||| || || |||||||| || ||||||    
T  32200691 tttagtttcttccttaaagagctttattttaactttgttttaaaatagcttttagaccgaaaaaaa 32200626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 34663963 - 34664032
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| ||||||||||||||| |||| ||||| |||||||| || |||||| | | ||||||||    
T  34663963 tttcttaaagagctttattttaactttattttaaagtagcttttagaccgaaaaaaagcctggccaaacg 34664032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 41106040 - 41106105
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||| |  ||||||| |||||||||    
T  41106040 tttagcttctttcttaaagggctttattttatctttgttttaaaggagtttttagaccgtaaaaaa 41106105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 55991921 - 55991986
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  55991921 tttagcctttttcttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 55991986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 30071440 - 30071480
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgtttt 200  Q
    |||| ||||||||||||||| ||||||||||||||||||||    
T  30071440 tttaacttctttcttaaagatctttattttaactttgtttt 30071480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 32139536 - 32139580
Alignment:
Q  181 ctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||    
T  32139536 ctttattttaactttgttttaaagtagcttttagaccgtaaaaaa 32139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 32206558 - 32206502
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| ||||||||||||||| |||| ||||| |||||||| || ||||||    
T  32206558 tttcttaaagagctttattttaactttattttaaagtagcttttagaccgaaaaaaa 32206502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 45019226 - 45019174
Alignment:
Q  173 ttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  45019226 ttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 45019174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 23628946 - 23628989
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||    
T  23628946 cttaaagaactttattttaactttgttttaaagtagcttttaga 23628989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 28361467 - 28361412
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| || || ||||| |||||||||||||||||||| ||||| ||||||||    
T  28361467 tttagctttttcctgaaagagctttattttaactttgttttaaagtagcttttaga 28361412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 34664921 - 34664976
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| ||  ||||||| |||||||||||||||||||| ||||| ||||||||    
T  34664921 tttagctttttctttaaagaactttattttaactttgttttaaagtagcttttaga 34664976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 8848051 - 8848117
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||||| |||||||||||||||||||| ||||| ||| |||| || |||||| | | ||||||||    
T  8848051 cttaaagagctttattttaactttgttttaaagtagcttgtagaccgaaaaaaagcctggccaaacg 8848117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 26871725 - 26871675
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| || |||||||||||| |||| ||||| ||||||||||||||||    
T  26871725 gaacaatgcacaaatatatgtcaggtccggggtttgaaccccggacaccat 26871675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 9097582 - 9097549
Alignment:
Q  25 cataaatatatgtcaagtccagggttcgaacccc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  9097582 cataaatataagtcaagtccagggttcgaacccc 9097549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 39651843 - 39651896
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  39651843 cttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 39651896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 46045762 - 46045709
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | |||||||||||||||||||| ||||| |||||||| || ||||||    
T  46045762 cttaaaaagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 46045709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 55188270 - 55188335
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| ||||||||||||||| |||| || ||| ||||||| || ||||||    
T  55188270 tttagcctttttcttaaagagctttattttaactttattttaaaataatttttagaccgaaaaaaa 55188335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 37873618 - 37873562
Alignment:
Q  160 tttagcttctttcttaaagacctttatttt-aactttgttttgaagtaacttttaga 215  Q
    |||||||| || |||||||| ||||||||| ||||||||||| ||||| ||||||||    
T  37873618 tttagctttttccttaaagagctttatttttaactttgttttaaagtagcttttaga 37873562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 40951054 - 40951110
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||  |||||||||||||| |||| ||||| |||||||| || ||||||    
T  40951054 tttcttaaagagttttattttaactttattttaaagtagcttttagaccgaaaaaaa 40951110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 33976098 - 33976218
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttg-ccaaacgatatctaagttcagctggga 258  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | |||||||||||  ||||    
T  33976098 tttagcttctttcttaaaagcctttattttaactttgttttgaagtaacttttagaccgtaaaaaacctttgaccaaacggtgtctaagttcagtcggga 33976197  T
Q  259 acactgtttcactttcttctt 279  Q
    |||||||||||||||||||||    
T  33976198 acactgtttcactttcttctt 33976218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 12582435 - 12582316
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  12582435 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 12582336  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  12582335 cactgtttcactttcttctt 12582316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 28231059 - 28230954
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||  ||||||||||||| ||||||    
T  28231059 tttagcttctttcttaaaggcctttattttaactttgttttgaagtaatttttagacagtaaaaaacctttgccaaacagtatctaagttcagttgggaa 28230960  T
Q  260 cactgt 265  Q
    ||||||    
T  28230959 cactgt 28230954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 247514 - 247633
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||  ||||||| |||||||||||||  |||||    
T  247514 tttagtttctttcataaaggcctttatttttactttgttttgaagtaacttttataatgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 247613  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  247614 cactgtttcactttcttctt 247633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 175 - 279
Target Start/End: Complemental strand, 3053913 - 3053809
Alignment:
Q  175 aaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaacactgtttcactttc 274  Q
    |||| ||| ||||||||||||||| ||||||| |||||||| | ||||||||||| |||||| | |||||||||||||||| ||||||| ||||||||||    
T  3053913 aaaggcctgtattttaactttgttatgaagtatcttttagaccataaaaaaccttggccaaatggtatctaagttcagctgagaacactatttcactttc 3053814  T
Q  275 ttctt 279  Q
    |||||    
T  3053813 ttctt 3053809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 28231192 - 28231142
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28231192 gaacaattcataaatatatgtcaagtccggggttcgaaccccggacaccat 28231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 33975951 - 33976001
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  33975951 gaacaatgcataaatatatgtcaagtccggggttcgaaccccggacaccat 33976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 559837 - 559906
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| || |||||| | | ||||||||    
T  559837 tttcttaaagagctttattttaactttgttttaaagtaacttttagaccgaaaaaaagcctggccaaacg 559906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 279
Target Start/End: Complemental strand, 3090761 - 3090722
Alignment:
Q  240 tatctaagttcagctgggaacactgtttcactttcttctt 279  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3090761 tatctaagttcagctgggaacactgtttcactttcttctt 3090722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7541205 - 7541270
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7541205 tttagctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7541270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 18593583 - 18593518
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  18593583 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 18593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 33945784 - 33945728
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  33945784 tttcttaaaaagctttattttaactttgttttaaagtatcttttagatcgaaaaaaa 33945728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 6018535 - 6018492
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  6018535 cttaaagagctttattttaactttgttttaaagtaacttttaga 6018492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 17505596 - 17505651
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||    
T  17505596 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaa 17505651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 28472323 - 28472378
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  28472323 tttatcttttttcttaaagagctttattttaactttgttttaaagtagcttttaga 28472378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 29859512 - 29859567
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  29859512 tttatcttttttcttaaagagctttattttaactttgttttaaagtagcttttaga 29859567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 3054039 - 3053989
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| ||||||||||||||||||| |||| |||||| |||||||||||    
T  3054039 gaacaatgcataaatatatgtcaagtctagggctcgaacgccggacaccat 3053989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 20791656 - 20791725
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||| || |||||| | | ||||||||    
T  20791656 tttcttaaagagctttattttaactttgttttaaagtattttttagaccgaaaaaaagcctggccaaacg 20791725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 32244477 - 32244542
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| ||||||||||||||| |||| ||||| |||||||| || ||||||    
T  32244477 tttagcctttttcttaaagagctttattttaactttattttaaagtagcttttagaccgaaaaaaa 32244542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 34247717 - 34247664
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  34247717 cttaaagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaa 34247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 34206976 - 34206920
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||| | |||||||||||||||||||| ||||| |||||||| || ||||||    
T  34206976 tttcttaaaaagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 34206920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 10943123 - 10943068
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| || |||||||| |||||||||||||||||||| |||||  |||||||    
T  10943123 tttagctttttccttaaagagctttattttaactttgttttaaagtagattttaga 10943068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 10945820 - 10945863
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| |||||| |||||||    
T  10945820 cttaaagaactttattttaactttgttttaaagtaaattttaga 10945863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 3850326 - 3850404
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| |||||||||||||||||||  ||||| |||||| | || |||||| | | ||||||||    
T  3850326 tttagcctttttcttaaagagctttattttaactttgtttgaaagtagcttttacaccgaaaaaaagcctggccaaacg 3850404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 12582582 - 12582532
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| |||||||| ||||||||||| | ||||||||||| ||||||||    
T  12582582 gaacaatgcataaatacatgtcaagtccggagttcgaaccccagacaccat 12582532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24046536 - 24046471
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||| |  ||||||||||||||||||| ||||| |||||||| || ||||||    
T  24046536 tttagcctttttcttaaatagttttattttaactttgttttaaagtagcttttagaccgaaaaaaa 24046471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 29043307 - 29043371
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||    
T  29043307 tttagctttttccttaaagagctctattttaactttgttttaaagtagc-tttagatcggaaaaaa 29043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 37461966 - 37462085
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  37461966 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 37462065  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  37462066 cactgtttcactttcttctt 37462085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 3213206 - 3213106
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||||| ||||||    
T  3213206 tttatcttctttcttaaagacctttattttaactttgttttgaagtaacttttagaccgtaaaaaaccttggtcaaacggtatctaagttcagttgggaa 3213107  T
Q  260 c 260  Q
    |    
T  3213106 c 3213106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 18041162 - 18041042
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgt-aaaaaacctttgccaaacgatatctaagttcagctggga 258  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| | | ||||||| || |||||||| ||| |||||||||||| ||    
T  18041162 tttaacttctttcttaaaggcctgtattttaactttgttttgaagtaacttttagaccataaaaaaacgttggccaaacggtatttaagttcagctgaga 18041063  T
Q  259 acactgtttcactttcttctt 279  Q
    |||||||||||||||||||||    
T  18041062 acactgtttcactttcttctt 18041042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 33929080 - 33929194
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||| |||||||||||| ||| ||||||||||||||||||||||||| |||| |      ||||||||||||||||||||    
T  33929080 tttagtttctttcttaaaggccttcattttaactttgctttaaagtaacttttagatcgtaaaaaacatttgtc-----gtatctaagttcagctgggaa 33929174  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  33929175 caatgtttcactttcttctt 33929194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 43354611 - 43354728
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    |||| |||||||||||||| |||||||||| | ||| ||||||||||||||||||| ||| |||||  || ||||| |  || |||||||||| ||||||    
T  43354611 tttatcttctttcttaaaggcctttatttttattttattttgaagtaacttttagaccgttaaaaaggttggccaagctgtacctaagttcagttgggaa 43354710  T
Q  260 cactgtttcactttcttc 277  Q
    |||||||||| |||||||    
T  43354711 cactgtttcattttcttc 43354728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 28887281 - 28887343
Alignment:
Q  163 agcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||||||| |||||||||    
T  28887281 agcttctttcttaaatgcctttattttaactttgttttaaagtaacttttagaccgtaaaaaa 28887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 9700094 - 9700213
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| |||||||||||||  ||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||| || |  ||||| | ||||||    
T  9700094 tttagattctttcttaaaggtctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacggtagcagagttcggatgggaa 9700193  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| | ||||||||||    
T  9700194 aactgttacgctttcttctt 9700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 29383700 - 29383613
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaag 247  Q
    |||||| | |||||||||||||||||||||||||||||||| ||||| |||||||| || |||||| | | |||||||| || |||||    
T  29383700 tttagcctttttcttaaagacctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacggtacctaag 29383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 15875722 - 15875676
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagta 206  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  15875722 tttagcttctttcttaaagacctttattttaactttgttttaaagta 15875676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 33928935 - 33928985
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  33928935 gaacaattcataaatatatgccaagtccggggttcgaaccccggacaccat 33928985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 7536745 - 7536823
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||  ||||||  || ||||||||    
T  7536745 tttagctttttccttaaagaactttattttaactttgttttaaagtagcttttagatccaaaaaaaatttggccaaacg 7536823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 8314941 - 8315007
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||  |||||||||||    
T  8314941 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagttttgccaaacg 8315007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 790035 - 789970
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  790035 tttaacttttttcttaaagagctttattttaactttgttttaaagtaccttttagaccgaaaaaaa 789970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 3297798 - 3297733
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  3297798 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 3297733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 4374818 - 4374749
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  4374818 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 4374749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 14205512 - 14205577
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  14205512 tttaacttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 14205577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 29874642 - 29874577
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| ||||||||||| ||||||||| |||||||||| ||||| |||||||| || ||||||    
T  29874642 tttagcttttttcttaaagaactttatttttactttgttttaaagtagcttttagaccgaaaaaaa 29874577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 31939807 - 31939742
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  31939807 tttagcctttttcttaaagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaa 31939742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 24027824 - 24027768
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  24027824 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 24027768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 36088683 - 36088743
Alignment:
Q  165 cttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||||||  |||||||||||||||||||| ||||| |||||||| || ||||||    
T  36088683 cttctttcttaaagggctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 36088743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 24759081 - 24759136
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  24759081 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttaga 24759136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 25821321 - 25821376
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  25821321 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttaga 25821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 28746280 - 28746237
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  28746280 cttaaagagctttattttaactttgttttaaagtaacttttaga 28746237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 3213346 - 3213304
Alignment:
Q  25 cataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  3213346 cataaatatatgtcaagtccggggttcgaatcccggacaccat 3213304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 16050747 - 16050669
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| |||||||||||||||||||| || || |||||||| || |||||| | | ||||||||    
T  16050747 tttagcctttttcttaaagaactttattttaactttgttttaaaatagcttttagaccgaaaaaaagcctggccaaacg 16050669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 30503731 - 30503653
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||  |||||||| || |||||| | | ||||||||    
T  30503731 tttaacttttttcttaaagagctttattttaactttgttttaaagttgcttttagaccgaaaaaaagcatggccaaacg 30503653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 30544074 - 30543996
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||  |||||||| || |||||| | | ||||||||    
T  30544074 tttaacttttttcttaaagagctttattttaactttgttttaaagttgcttttagaccgaaaaaaagcatggccaaacg 30543996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 42110788 - 42110866
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| ||||||||||||||| |||| ||||| |||||||| || |||||| | | ||||||||    
T  42110788 tttagcctttttcttaaagaactttattttaactttattttaaagtagcttttagaacgaaaaaaagcctggccaaacg 42110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 2475247 - 2475182
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  2475247 tttagcctttttcttaaagaactttattttaactttgttttaaagtagtttttagaccgaaaaaaa 2475182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 15976582 - 15976647
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||| ||||||| |||||||||||||||||||| |||| ||||||||| || ||||||    
T  15976582 tttagccttttttttaaagagctttattttaactttgttttaaagtgacttttagaccgaaaaaaa 15976647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 28990906 - 28990842
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||| ||||||||||  |||| |||||||||||||||| |||||||||||| | |||||||||    
T  28990906 tttagctcctttcttaaatgcctt-attttaactttgttttaaagtaacttttaaaccgtaaaaaa 28990842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 36515033 - 36514968
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| |||||||||||||   |||||||||||||||||||| ||| | |||||||| |||||||||    
T  36515033 tttaacttctttcttaaacgactttattttaactttgttttaaaggagcttttagaccgtaaaaaa 36514968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 43396622 - 43396687
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || |||||||| |||||||||||||||||||| |||||  ||||||| || ||||||    
T  43396622 tttagctttttccttaaagagctttattttaactttgttttaaagtagtttttagaccgaaaaaaa 43396687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 10042908 - 10042960
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || |||||    
T  10042908 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaa 10042960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 43354468 - 43354516
Alignment:
Q  19 acaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||| ||||||||||||  |||||| ||||||||||||||||||||||    
T  43354468 acaatacataaatatatgcaaagtccggggttcgaaccccggacaccat 43354516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 665525 - 665470
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||    
T  665525 tttcttaaagagctttattttaaatttgttttaaagtagcttttagaccgaaaaaa 665470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 788987 - 788944
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||    
T  788987 cttaaagagctttattttaagtttgttttaaagtaacttttaga 788944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 2530197 - 2530240
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||    
T  2530197 cttaaagagctttattttaactttgttttaaagtagcttttaga 2530240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 27176449 - 27176394
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | ||||||||||| |||||||||||||||||||| || || ||||||||    
T  27176449 tttagcctttttcttaaagagctttattttaactttgttttaaaataccttttaga 27176394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 30503504 - 30503449
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||| ||| |||||||||||  ||||||||||||||||||| ||||| ||||||||    
T  30503504 tttaacttttttcttaaagagttttattttaactttgttttaaagtagcttttaga 30503449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 30543847 - 30543792
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||| ||| |||||||||||  ||||||||||||||||||| ||||| ||||||||    
T  30543847 tttaacttttttcttaaagagttttattttaactttgttttaaagtagcttttaga 30543792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 32261689 - 32261634
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | ||||| ||||| |||||||||||||||||||| ||||| ||||||||    
T  32261689 tttagcctttttctgaaagagctttattttaactttgttttaaagtagcttttaga 32261634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 42111771 - 42111728
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||    
T  42111771 cttaaagaactttattttaactttgttttaaagtagcttttaga 42111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 42322975 - 42323030
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | ||||| ||||| |||||||||||||||||||| ||||| ||||||||    
T  42322975 tttagcctttttctcaaagagctttattttaactttgttttaaagtagcttttaga 42323030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 42416899 - 42416954
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||| ||| ||||||||||  |||||||||||||||||||| ||||| ||||||||    
T  42416899 tttaacttttttcttaaagggctttattttaactttgttttaaagtagcttttaga 42416954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 9699950 - 9700000
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| || |||||||||||| |||| ||||||||||| ||||||||||    
T  9699950 gaacaatgcaaaaatatatgtcaggtccggggttcgaaccacggacaccat 9700000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 37461819 - 37461869
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||| |||||||| ||||||||||| | ||||||||||| ||||||||    
T  37461819 gaacaatgcataaatacatgtcaagtccggagttcgaaccccagacaccat 37461869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 14720282 - 14720347
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||||| |||||||  |||| |||||||||||||||| |||||  ||||||| |||||||||    
T  14720282 tttaacttctatcttaaaacccttaattttaactttgttttaaagtagtttttagaccgtaaaaaa 14720347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 39783070 - 39783111
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||||||| |||||||||||||||||||| ||||| ||||||    
T  39783070 cttaaagaactttattttaactttgttttaaagtagctttta 39783111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 5589439 - 5589376
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    |||||| | ||||||||||| |||||||| ||||||||||| ||||| |||||||| || |||||    
T  5589439 tttagcctttttcttaaagagctttattt-aactttgttttaaagtagcttttagaccgaaaaaa 5589376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 3708548 - 3708667
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||  ||||||||||||  ||||||| |||||||||||||  |||||    
T  3708548 tttagtttctttcttaaaggcctttatttttactttgttttgaagtaacttttagactgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 3708647  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  3708648 cactgtttcactttcttctt 3708667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 35287281 - 35287167
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||      ||||||||||||||||||||    
T  35287281 tttagtttctttcttaaaggcctttattttaactttgttttaaagtaacttttagatcgtaaaaaacatttgcc-----gtatctaagttcagctgggaa 35287187  T
Q  260 cactgtttcactttcttctt 279  Q
    || |||||||||||||||||    
T  35287186 caatgtttcactttcttctt 35287167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 11868868 - 11868749
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||  ||||||| |||||||||||||  |||||    
T  11868868 tttagtttctttcataaaggcctttatttttactttgttttgaagtaacttttataatgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 11868769  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  11868768 cactgtttcactttcttctt 11868749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 35360261 - 35360142
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||  ||||||| |||||||||||||  |||||    
T  35360261 tttagtttctttcataaaggcctttatttttactttgttttgaagtaacttttataatgtaaaaaaccttgaccaaacggtatctaagttcagtcgggaa 35360162  T
Q  260 cactgtttcactttcttctt 279  Q
    ||||||||||||||||||||    
T  35360161 cactgtttcactttcttctt 35360142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 4631314 - 4631392
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||| | | ||||||||    
T  4631314 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagatcgaaaaaaagcctggccaaacg 4631392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 35287428 - 35287378
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  35287428 gaacaattcataaatatatgccaagtccggggttcgaaccccggacaccat 35287378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 668264 - 668199
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  668264 tttagcttttttcttaaagaactttattttaactttgttttaaagtagcttttagaccgaaaaaaa 668199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 20313220 - 20313155
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||    
T  20313220 tttagcctttttcttaaagagctttattttaactttgttttaaagtaacttttagaccgaaaaaaa 20313155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 1118081 - 1118146
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || ||||||||  ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  1118081 tttagctttttccttaaagagttttattttaactttgttttaaagtagcttttagatcgaaaaaaa 1118146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 3079818 - 3079883
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  3079818 tttagctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 3079883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7274773 - 7274838
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7274773 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7274838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 8683770 - 8683839
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  8683770 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 8683839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 17032786 - 17032721
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  17032786 tttaacttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 17032721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 17051122 - 17051057
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  17051122 tttaacttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 17051057  T

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Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 18166807 - 18166742
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||| ||||||| |||||||||||||||||||| |||||||||||||| || ||||||    
T  18166807 tttagccttttttttaaagaactttattttaactttgttttaaagtaacttttagaccgaaaaaaa 18166742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 34912764 - 34912833
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgata 241  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | |||||||||||    
T  34912764 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctagccaaacgata 34912833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 36085919 - 36085854
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  36085919 tttagcctttttcttaaagatctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 36085854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 971065 - 971121
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  971065 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 971121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 1835786 - 1835850
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || |||||    
T  1835786 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaa 1835850  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 8878231 - 8878287
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  8878231 tttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 8878287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 3243255 - 3243189
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || |||||| | | ||||||||    
T  3243255 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacg 3243189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24926058 - 24925993
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||  ||||| |||||| |||| ||||||    
T  24926058 tttagcctttttcttaaagagctttattttaactttgtttaaaagtagcttttaaatcgaaaaaaa 24925993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 31972393 - 31972462
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||| | || |||||| | | ||||||||    
T  31972393 tttcttaaagagctttattttaactttgttttaaagtagcttttaaaccgaaaaaaagcctggccaaacg 31972462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 38959617 - 38959564
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||    
T  38959617 tttagcctttttcttaaagagctttattttaactttgttttaaagtagctttta 38959564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 40202328 - 40202381
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  40202328 cttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 40202381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 1692751 - 1692699
Alignment:
Q  15 atgaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    ||||||||| |||||||| ||| |||||| ||||||||||||||||| |||||    
T  1692751 atgaacaatgcataaatacatgccaagtcaagggttcgaaccccggataccat 1692699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 3324223 - 3324171
Alignment:
Q  173 ttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  3324223 ttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 3324171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 5166378 - 5166434
Alignment:
Q  169 tttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||| || || ||||||    
T  5166378 tttcttaaagagctttattttaactttgttttaaagtagctttttgaccgaaaaaaa 5166434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 35423894 - 35423946
Alignment:
Q  173 ttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  35423894 ttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 35423946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 36078533 - 36078481
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||||||| ||| ||||||| |||||||||||||||||||| ||||| ||||||    
T  36078533 tttagctttttt-ttaaagagctttattttaactttgttttaaagtagctttta 36078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 32292308 - 32292352
Alignment:
Q  181 ctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||| |||||||||| ||| || ||||||    
T  32292308 ctttattttaactttgttttaaagtaactttaagaccgaaaaaaa 32292352  T

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Target: scaffold0038 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 31556 - 31451
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||  ||||||||||||| ||||||    
T  31556 tttagcttctttcttaaaggcctttattttaactttgttttgaagtaatttttagacagtaaaaaacctttgccaaacagtatctaagttcagttgggaa 31457  T
Q  260 cactgt 265  Q
    ||||||    
T  31456 cactgt 31451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 31689 - 31639
Alignment:
Q  17 gaacaattcataaatatatgtcaagtccagggttcgaaccccggacaccat 67  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31689 gaacaattcataaatatatgtcaagtccggggttcgaaccccggacaccat 31639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 322 - 441
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||||||||  ||||| | ||||||    
T  322 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacgatatcagagttcggatgggaa 421  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| ||||||||||||    
T  422 aactgttacactttcttctt 441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 1812 - 1876
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaa 224  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| ||||||||    
T  1812 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaa 1876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 55372 - 55253
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagttcagctgggaa 259  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| | || | |||||||||||  ||||| | ||||||    
T  55372 tttagattctttcttaaaggcctttattttaactttgttttgaaataacatttagaccgtaaaaaccattggtcaaacgatatcagagttcggatgggaa 55273  T
Q  260 cactgtttcactttcttctt 279  Q
     |||||| ||||||||||||    
T  55272 aactgttacactttcttctt 55253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 240 - 175
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  240 tttagcttctttcttaaagagctttattttaactttgttttaaagtaacttttagaccgtaaaaaa 175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1822 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 344 - 409
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||| |||||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||    
T  344 tttaacttctttcttaaagagttttattttaactttgttttaaagtaacttttagaccgtaaaaaa 409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 4486 - 4421
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  4486 tttagcatttttcttaaagagctttattttaactttgttttaaagtagcttttagatcgaaaaaaa 4421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 7552 - 7617
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7552 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 229183 - 229248
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||||||||||||||  |||||||||||||||||||| ||| | |||||||| |||||||||    
T  229183 tttagcttctttcttaaaggactttattttaactttgttttaaaggagcttttagaccgtaaaaaa 229248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 156544 - 156492
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttt 212  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  156544 tttagattatttcttaaaggcctttattttaactttgttttgaagtaactttt 156492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 156489 - 156442
Alignment:
Q  232 ccaaacgatatctaagttcagctgggaacactgtttcactttcttctt 279  Q
    ||||||| ||||||||||||||||||||| || || ||||||||||||    
T  156489 ccaaacggtatctaagttcagctgggaactctcttacactttcttctt 156442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 132760 - 132815
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  132760 tttagcttttttcttaaagagctttattttaactttgttttaaagtagcttttaga 132815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 7262 - 7197
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| |||||||| || ||||||    
T  7262 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaa 7197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 25811 - 25899
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacgatatctaagt 248  Q
    |||||| | |||||||||||  ||||||||||||||||||| ||||| |||||||| || |||||| | | |||||||| || ||||||    
T  25811 tttagcctttttcttaaagagttttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctggccaaacggtacctaagt 25899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 1575 - 1630
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttaga 215  Q
    |||||| | ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  1575 tttagcctttttcttaaagagctttattttaactttgttttaaagtagcttttaga 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 15211 - 15154
Alignment:
Q  181 ctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    |||||||||||||||||||| ||||| |||||||| || |||||| | ||||||||||    
T  15211 ctttattttaactttgttttaaagtagcttttagaccgaaaaaaaaccttgccaaacg 15154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 137990 - 137937
Alignment:
Q  172 cttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaa 225  Q
    |||||||| |||||||||||||||||||| |||||| ||||||| || ||||||    
T  137990 cttaaagagctttattttaactttgttttaaagtaatttttagaccgaaaaaaa 137937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 7548 - 7470
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaacttttagatcgtaaaaaacctttgccaaacg 238  Q
    ||||| || ||||||| ||  |||||||||||||||||||| || || ||||||||||| ||||||  || ||||||||    
T  7548 tttagtttttttcttataggactttattttaactttgttttaaaatagcttttagatcgaaaaaaagtttggccaaacg 7470  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 110500 - 110447
Alignment:
Q  160 tttagcttctttcttaaagacctttattttaactttgttttgaagtaactttta 213  Q
    |||||||| ||  ||||||| |||||||||||||||||||| ||||| ||||||    
T  110500 tttagctttttcgttaaagaactttattttaactttgttttaaagtagctttta 110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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