View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8394_low_23 (Length: 240)
Name: NF8394_low_23
Description: NF8394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8394_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 45236467 - 45236245
Alignment:
| Q |
1 |
tttcaaaggatttgtggtttataataatgaacatgttccatcatcaaattttcatttactcatatattgcactagctgtgtctaacaattctagtataag |
100 |
Q |
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| T |
45236467 |
tttcaaaggatttgtggtttataataatgaacatgttccatcatcaaattttcatttactcatatattgcactagctgtgtctaccaattctagtataag |
45236368 |
T |
|
| Q |
101 |
cagtctttgagccaaatctacttttaaatgatccaatacattcattattgaagccatgacagaagagataaaaggaacggtgcgcactacacagcctagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45236367 |
cagtctttgagccaaatctacttttaaatgatccaatacattcattattgaagccatgacagaagagataaaaggaacggtgcgcactacacagcctagt |
45236268 |
T |
|
| Q |
201 |
aagtaacttgtgatagaagtatt |
223 |
Q |
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|| |||||||||||||||||||| |
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| T |
45236267 |
aaataacttgtgatagaagtatt |
45236245 |
T |
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