View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8396_low_3 (Length: 296)
Name: NF8396_low_3
Description: NF8396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8396_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 26585651 - 26585918
Alignment:
| Q |
17 |
caataatatattttgtttattgctcaacaaccaatctaatcagcttcaatattgatccaaataattaagtggggtcaatagagtcaaatcaataccttaa |
116 |
Q |
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| T |
26585651 |
caataatatattttgtttattgctcaacaaccaatctaatcagcttcaatattgatccaaataattaagtggggtcaatagagtcaaatcaataccttaa |
26585750 |
T |
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| Q |
117 |
ttgaagtctacatgtggctagaaataatatgcatgcgtaaaaatcaaagactagaaaactagaccaaaacatttataaactgataaaccaaaacaattaa |
216 |
Q |
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| T |
26585751 |
ttgaagtctacatgtggctagaaataatatgcatgcgtaaaaaacaaagattagaaaactagaccaaaacatttataaactgataaaccaaaacaattaa |
26585850 |
T |
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| Q |
217 |
gatgattaaccaaatt-aaacatttgttttggacattaattcctcaaacttctttatggcttaactct |
283 |
Q |
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| T |
26585851 |
gatgattaaccaaattaaaacatttgttttggacattaattcctcaaacttctttatagcttaactct |
26585918 |
T |
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